Rmu_sc0001301.1_g000047
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001301.1
Physical Location & Seq
Forward (+)
224442 .. 226346
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001301.1_g000047.1.cds

Sequence Viewer

Length: 1377 bp
atgagccacgaagaagacgagtcgaacaagcaaggcaatcatcatgatgaggttgatgatgagcatgagcatgacatggtgatgccgggctttcgcttccatccaactgaagaagaactgatagagttttaccttcgccgtaaggtggagggcaagcgcttcaatgtcgaactgattacttttctcgacctttatcgctatgacccttgggaacttccagctatggccgcgattggagagaaggagtggttcttttatgtcccgagagacagaaagtaccggaacggcgacaggcccaaccgtgtgaccacatctggatactggaaggcaactggagccgatcggatgattcgaagcgagaacttccggtcaatcggattgaagaaaaccctagttttctactctgggaaagcccccaaaggcattcgaactagctggatcatgaacgagtatcgcttgccccatcatgaaactgaacgctatcaaaagggagaaatatccctttgccgagtttacaagagacccggagtggaagaccacccgtcgctgcctcgttctctgccgtcatccagagccgccgctaatgctaataatgcatccacatcaagatcagtactggctcagtcttcctcctcgtccaccttagacaaaaagcagcacagcattaacagtagtttgatggaaaaactccaagctaattttaacttcaatggagggtcgccgtcacttggccaatctgtagaacaacttcatcatcatcaagatcaggtggctgcggatccaaagattaacgaaacggaaggaagtagcgggaattcggatgtgacaagcacgctcggcgttggcctccgtagtagtgctcctaatattccaccaattcatcttccatcatcgtcgctcgggctacaacctcatcaccatcaccatggaggagtcctacacctcgatgatcaggccgaacaagaggggatgtcgacattcttgcagcagcagcagcaccaccactcaaagccacaatcaatgctgttcgccggatcttctgtttcatccacgtctaacccgattgatgatcttcaaagactcctgaattaccaacagcagcaagcagtttccagcattgccaatcaacaacaagctctacatgtacaacaatactatgatgctcataatcataatcaccaccaccaccaagtacctagcaacgtggttaaccatttctccagtcctttcccattggtacctcctccatcgtcacagtctcagctctcccccaacggacttccaataactgctttctccgaccgcctttgggactggaatcctatctcagaaccaaacagggcgcccgatcagtacaacaccaatccattcaagtaa

Protein Analysis

458

Amino Acids

51.92

Weight (kDa)

6.45

Isoelectric Point (pI)

60.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1237
AccB1I GGYRCC 2 cut(s) 1237, 1342
AccI GTMKAC 1 cut(s) 974
AccII CGCG 1 cut(s) 230
AciI CCGC 6 cut(s) 228, 576, 579, 776, 810, 1303
AclWI GGATC 4 cut(s) 446, 773, 786, 1042
AcoI YGGCCR 2 cut(s) 225, 730
AcsI RAATTY 1 cut(s) 814
AcuI CTGAAG 1 cut(s) 129
AcyI GRCGYC 1 cut(s) 1343
AfaI GTAC 6 cut(s) 278, 615, 1146, 1194, 1239, 1355
AfeI AGCGCT 1 cut(s) 158
AfiI CCNNNNNNNGG 3 cut(s) 145, 728, 1309
AflIII ACRYGT 1 cut(s) 1141
AgsI TTSAA 5 cut(s) 163, 382, 709, 1076, 1372
AhdI GACNNNNNGTC 1 cut(s) 541
AjiI CACGTC 1 cut(s) 1053
AluBI AGCT 5 cut(s) 221, 435, 695, 1136, 1264
AluI AGCT 5 cut(s) 221, 435, 695, 1136, 1264
Alw21I GWGCWC 1 cut(s) 862
Alw26I GTCTC 3 cut(s) 261, 514, 1263
AlwI GGATC 4 cut(s) 446, 773, 786, 1042
Ama87I CYCGRG 2 cut(s) 262, 899
Aor51HI AGCGCT 1 cut(s) 158
AoxI GGCC 5 cut(s) 225, 293, 730, 844, 954
ApeKI GCWGC 8 cut(s) 547, 655, 773, 985, 988, 991, 994, 1099
ApoI RAATTY 1 cut(s) 814
Asp700I GAANNNNTTC 1 cut(s) 747
Asp718I GGTACC 1 cut(s) 1237
AspLEI GCGC 2 cut(s) 159, 1345
AspS9I GGNCC 1 cut(s) 294
AsuC2I CCSGG 2 cut(s) 87, 525
AsuHPI GGTGA 4 cut(s) 91, 908, 914, 1169
AsuII TTCGAA 2 cut(s) 352, 427
AvaI CYCGRG 2 cut(s) 262, 899
BalI TGGCCA 1 cut(s) 732
BamHI GGATCC 1 cut(s) 778
BanI GGYRCC 2 cut(s) 1237, 1342
BarI GAAGNNNNNNTAC 2 cut(s) 732, 764
BbsI GAAGAC 3 cut(s) 21, 540, 618
Bbv12I GWGCWC 1 cut(s) 862
BbvI GCAGC 8 cut(s) 534, 667, 760, 997, 1000, 1003, 1006, 1111
BccI CCATC 6 cut(s) 108, 471, 673, 895, 927, 1255
BceAI ACGGC 4 cut(s) 123, 301, 547, 706
BcgI CGANNNNNNTGC 2 cut(s) 964, 998
BciVI GTATCC 1 cut(s) 311
BclI TGATCA 1 cut(s) 949
BcnI CCSGG 2 cut(s) 87, 525
BcoDI GTCTC 3 cut(s) 261, 514, 1263
BfaI CTAG 3 cut(s) 392, 432, 1197
BfmI CTRYAG 1 cut(s) 738
BfoI RGCGCY 2 cut(s) 160, 1346
BfuI GTATCC 1 cut(s) 311
BmcAI AGTACT 1 cut(s) 615
Bme1390I CCNGG 2 cut(s) 87, 525
BmeRI GACNNNNNGTC 1 cut(s) 541
BmeT110I CYCGRG 2 cut(s) 262, 899
BmgBI CACGTC 1 cut(s) 1053
BmgT120I GGNCC 1 cut(s) 294
BmiI GGNNCC 4 cut(s) 337, 780, 1239, 1344
BmrFI CCNGG 2 cut(s) 87, 525
BmsI GCATC 3 cut(s) 72, 605, 1150
BpiI GAAGAC 3 cut(s) 21, 540, 618
BpmI CTGGAG 2 cut(s) 354, 1204
Bpu14I TTCGAA 2 cut(s) 352, 427
BpuMI CCSGG 2 cut(s) 87, 525
BsaHI GRCGYC 1 cut(s) 1343
BsaI GGTCTC 1 cut(s) 514
BsaJI CCNNGG 2 cut(s) 206, 925
BsaWI WCCGGW 2 cut(s) 279, 366
BsaXI ACNNNNNCTCC 2 cut(s) 1202, 1232
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 728, 1309
Bse1I ACTGG 5 cut(s) 326, 337, 621, 1221, 1319
Bse3DI GCAATG 1 cut(s) 1116
BseDI CCNNGG 2 cut(s) 206, 925
BseGI GGATG 7 cut(s) 100, 351, 566, 596, 826, 975, 1046
BseLI CCNNNNNNNGG 3 cut(s) 145, 728, 1309
BseMI GCAATG 1 cut(s) 1116
BseMII CTCAG 3 cut(s) 635, 1274, 1341
BseNI ACTGG 5 cut(s) 326, 337, 621, 1221, 1319
BseRI GAGGAG 3 cut(s) 622, 945, 1233
BseXI GCAGC 8 cut(s) 534, 667, 760, 997, 1000, 1003, 1006, 1111
Bsh1236I CGCG 1 cut(s) 230
Bsh1285I CGRYCG 2 cut(s) 343, 1303
BshFI GGCC 5 cut(s) 227, 295, 732, 846, 956
BshNI GGYRCC 2 cut(s) 1237, 1342
BsiEI CGRYCG 2 cut(s) 343, 1303
BsiHKAI GWGCWC 1 cut(s) 862
BsiHKCI CYCGRG 2 cut(s) 262, 899
BsiSI CCGG 5 cut(s) 86, 280, 367, 525, 1032
BslFI GGGAC 2 cut(s) 245, 1325
BslI CCNNNNNNNGG 3 cut(s) 145, 728, 1309
BsmAI GTCTC 3 cut(s) 261, 514, 1263
BsmFI GGGAC 2 cut(s) 245, 1325
BsmI GAATGC 1 cut(s) 423
BsnI GGCC 5 cut(s) 227, 295, 732, 846, 956
Bso31I GGTCTC 1 cut(s) 514
BsoBI CYCGRG 2 cut(s) 262, 899
Bsp119I TTCGAA 2 cut(s) 352, 427
Bsp1286I GDGCHC 1 cut(s) 862
Bsp1407I TGTACA 1 cut(s) 1144
Bsp143I GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
Bsp19I CCATGG 1 cut(s) 925
BspACI CCGC 6 cut(s) 228, 576, 579, 776, 810, 1303
BspANI GGCC 5 cut(s) 227, 295, 732, 846, 956
BspCNI CTCAG 3 cut(s) 634, 1273, 1340
BspFNI CGCG 1 cut(s) 230
BspHI TCATGA 3 cut(s) 43, 441, 466
BspLI GGNNCC 4 cut(s) 337, 780, 1239, 1344
BspPI GGATC 4 cut(s) 446, 773, 786, 1042
BspT104I TTCGAA 2 cut(s) 352, 427
BspT107I GGYRCC 2 cut(s) 1237, 1342
BspTNI GGTCTC 1 cut(s) 514
BsrDI GCAATG 1 cut(s) 1116
BsrGI TGTACA 1 cut(s) 1144
BsrI ACTGG 5 cut(s) 326, 337, 621, 1221, 1319
BssECI CCNNGG 2 cut(s) 206, 925
BssMI GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
BssNI GRCGYC 1 cut(s) 1343
BssT1I CCWWGG 2 cut(s) 206, 925
Bst4CI ACNGT 3 cut(s) 302, 671, 1257
BstACI GRCGYC 1 cut(s) 1343
BstAUI TGTACA 1 cut(s) 1144
BstBI TTCGAA 2 cut(s) 352, 427
BstC8I GCNNGC 4 cut(s) 155, 458, 833, 1104
BstDEI CTNAG 4 cut(s) 621, 643, 1260, 1327
BstDSI CCRYGG 1 cut(s) 925
BstF5I GGATG 7 cut(s) 100, 351, 566, 596, 826, 975, 1046
BstFNI CGCG 1 cut(s) 230
BstH2I RGCGCY 2 cut(s) 160, 1346
BstHHI GCGC 2 cut(s) 159, 1345
BstKTI GATC 9 cut(s) 343, 441, 611, 766, 781, 952, 1037, 1072, 1351
BstMAI GTCTC 3 cut(s) 261, 514, 1263
BstMBI GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
BstMCI CGRYCG 2 cut(s) 343, 1303
BstMWI GCNNNNNNNGC 7 cut(s) 227, 335, 584, 593, 837, 991, 994
BstNSI RCATGY 1 cut(s) 1145
BstSCI CCNGG 2 cut(s) 85, 523
BstSFI CTRYAG 1 cut(s) 738
BstUI CGCG 1 cut(s) 230
BstV1I GCAGC 8 cut(s) 534, 667, 760, 997, 1000, 1003, 1006, 1111
BstV2I GAAGAC 3 cut(s) 21, 540, 618
BstX2I RGATCY 2 cut(s) 778, 1034
BstXI CCANNNNNNTGG 1 cut(s) 926
BstYI RGATCY 2 cut(s) 778, 1034
BsuI GTATCC 1 cut(s) 311
BsuRI GGCC 5 cut(s) 227, 295, 732, 846, 956
BtgI CCRYGG 1 cut(s) 925
BtrI CACGTC 1 cut(s) 1053
BtsCI GGATG 7 cut(s) 100, 351, 566, 596, 826, 975, 1046
Cac8I GCNNGC 4 cut(s) 155, 458, 833, 1104
CciI TCATGA 3 cut(s) 43, 441, 466
CfoI GCGC 2 cut(s) 159, 1345
Cfr13I GGNCC 1 cut(s) 294
Csp6I GTAC 6 cut(s) 277, 614, 1145, 1193, 1238, 1354
CviAII CATG 8 cut(s) 44, 65, 71, 76, 442, 467, 926, 1142
CviQI GTAC 6 cut(s) 277, 614, 1145, 1193, 1238, 1354
DdeI CTNAG 4 cut(s) 621, 643, 1260, 1327
DinI GGCGCC 1 cut(s) 1344
DpnI GATC 9 cut(s) 342, 440, 610, 765, 780, 951, 1036, 1071, 1350
DpnII GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
DriI GACNNNNNGTC 1 cut(s) 541
EaeI YGGCCR 2 cut(s) 225, 730
Eam1105I GACNNNNNGTC 1 cut(s) 541
Eco130I CCWWGG 2 cut(s) 206, 925
Eco31I GGTCTC 1 cut(s) 514
Eco47III AGCGCT 1 cut(s) 158
Eco57I CTGAAG 1 cut(s) 129
Eco88I CYCGRG 2 cut(s) 262, 899
EcoRI GAATTC 1 cut(s) 814
EcoT14I CCWWGG 2 cut(s) 206, 925
EcoT22I ATGCAT 1 cut(s) 598
EgeI GGCGCC 1 cut(s) 1344
EheI GGCGCC 1 cut(s) 1344
ErhI CCWWGG 2 cut(s) 206, 925
FaeI CATG 8 cut(s) 47, 68, 74, 79, 445, 470, 929, 1145
FaqI GGGAC 2 cut(s) 245, 1325
FatI CATG 8 cut(s) 43, 64, 70, 75, 441, 466, 925, 1141
FauI CCCGC 1 cut(s) 803
FbaI TGATCA 1 cut(s) 949
FblI GTMKAC 1 cut(s) 974
FokI GGATG 7 cut(s) 87, 358, 553, 583, 833, 982, 1033
FspBI CTAG 3 cut(s) 392, 432, 1197
GlaI GCGC 2 cut(s) 158, 1344
GsuI CTGGAG 2 cut(s) 354, 1204
HaeII RGCGCY 2 cut(s) 160, 1346
HaeIII GGCC 5 cut(s) 227, 295, 732, 846, 956
HapII CCGG 5 cut(s) 86, 280, 367, 525, 1032
HhaI GCGC 2 cut(s) 159, 1345
Hin1I GRCGYC 1 cut(s) 1343
Hin1II CATG 8 cut(s) 47, 68, 74, 79, 445, 470, 929, 1145
Hin6I GCGC 2 cut(s) 157, 1343
HinP1I GCGC 2 cut(s) 157, 1343
HincII GTYRAC 2 cut(s) 975, 1210
HindII GTYRAC 2 cut(s) 975, 1210
HinfI GANTC 5 cut(s) 20, 349, 933, 1080, 1318
HpaI GTTAAC 1 cut(s) 1210
HpaII CCGG 5 cut(s) 86, 280, 367, 525, 1032
HphI GGTGA 4 cut(s) 91, 908, 914, 1169
Hpy166II GTNNAC 4 cut(s) 514, 639, 975, 1210
Hpy188I TCNGA 5 cut(s) 345, 377, 820, 1300, 1330
Hpy8I GTNNAC 4 cut(s) 514, 639, 975, 1210
Hpy99I CGWCG 2 cut(s) 547, 898
HpyAV CCTTC 4 cut(s) 143, 235, 319, 794
HpyCH4III ACNGT 3 cut(s) 302, 671, 1257
HpyCH4IV ACGT 2 cut(s) 1052, 1203
HpyCH4V TGCA 2 cut(s) 596, 985
HpyF10VI GCNNNNNNNGC 7 cut(s) 227, 335, 584, 593, 837, 991, 994
HpyF3I CTNAG 4 cut(s) 621, 643, 1260, 1327
HpySE526I ACGT 2 cut(s) 1052, 1203
Hsp92I GRCGYC 1 cut(s) 1343
Hsp92II CATG 8 cut(s) 47, 68, 74, 79, 445, 470, 929, 1145
HspAI GCGC 2 cut(s) 157, 1343
KasI GGCGCC 1 cut(s) 1342
KpnI GGTACC 1 cut(s) 1241
Ksp22I TGATCA 1 cut(s) 949
KspAI GTTAAC 1 cut(s) 1210
Kzo9I GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
LmnI GCTCC 2 cut(s) 335, 865
Lsp1109I GCAGC 8 cut(s) 534, 667, 760, 997, 1000, 1003, 1006, 1111
LweI GCATC 3 cut(s) 72, 605, 1150
MaeI CTAG 3 cut(s) 392, 432, 1197
MaeII ACGT 2 cut(s) 1052, 1203
MaeIII GTNAC 4 cut(s) 304, 723, 823, 1251
MalI GATC 9 cut(s) 342, 440, 610, 765, 780, 951, 1036, 1071, 1350
MboI GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
MflI RGATCY 2 cut(s) 778, 1034
MhlI GDGCHC 1 cut(s) 862
MlsI TGGCCA 1 cut(s) 732
MluCI AATT 4 cut(s) 697, 814, 876, 1087
MluNI TGGCCA 1 cut(s) 732
Mly113I GGCGCC 1 cut(s) 1343
MlyI GAGTC 3 cut(s) 29, 942, 1074
MmeI TCCRAC 2 cut(s) 128, 1323
Mox20I TGGCCA 1 cut(s) 732
Mph1103I ATGCAT 1 cut(s) 598
MroXI GAANNNNTTC 1 cut(s) 747
MscI TGGCCA 1 cut(s) 732
MseI TTAA 4 cut(s) 666, 702, 789, 1209
MslI CAYNNNNRTG 5 cut(s) 45, 69, 80, 924, 945
Msp20I TGGCCA 1 cut(s) 732
MspI CCGG 5 cut(s) 86, 280, 367, 525, 1032
MspR9I CCNGG 2 cut(s) 87, 525
Mva1269I GAATGC 1 cut(s) 423
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 7 cut(s) 227, 335, 584, 593, 837, 991, 994
NarI GGCGCC 1 cut(s) 1343
NciI CCSGG 2 cut(s) 87, 525
NcoI CCATGG 1 cut(s) 925
NdeII GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
NlaIII CATG 8 cut(s) 47, 68, 74, 79, 445, 470, 929, 1145
NlaIV GGNNCC 4 cut(s) 337, 780, 1239, 1344
NmeAIII GCCGAG 2 cut(s) 533, 816
NmuCI GTSAC 4 cut(s) 304, 723, 823, 1251
NsiI ATGCAT 1 cut(s) 598
NspI RCATGY 1 cut(s) 1145
NspV TTCGAA 2 cut(s) 352, 427
PagI TCATGA 3 cut(s) 43, 441, 466
PciI ACATGT 1 cut(s) 1141
PcsI WCGNNNNNNNCGW 3 cut(s) 15, 349, 1058
PctI GAATGC 1 cut(s) 423
PdmI GAANNNNTTC 1 cut(s) 747
PfeI GAWTC 2 cut(s) 349, 1318
Ple19I CGATCG 1 cut(s) 343
PleI GAGTC 3 cut(s) 28, 941, 1074
PluTI GGCGCC 1 cut(s) 1346
PpsI GAGTC 3 cut(s) 28, 941, 1074
PscI ACATGT 1 cut(s) 1141
PspN4I GGNNCC 4 cut(s) 337, 780, 1239, 1344
PspPI GGNCC 1 cut(s) 294
PsuI RGATCY 2 cut(s) 778, 1034
PvuI CGATCG 1 cut(s) 343
RsaI GTAC 6 cut(s) 278, 615, 1146, 1194, 1239, 1355
RsaNI GTAC 6 cut(s) 277, 614, 1145, 1193, 1238, 1354
RseI CAYNNNNRTG 5 cut(s) 45, 69, 80, 924, 945
SalI GTCGAC 1 cut(s) 973
SaqAI TTAA 4 cut(s) 666, 702, 789, 1209
Sau3AI GATC 9 cut(s) 340, 438, 608, 763, 778, 949, 1034, 1069, 1348
Sau96I GGNCC 1 cut(s) 294
ScaI AGTACT 1 cut(s) 615
SchI GAGTC 3 cut(s) 29, 942, 1074
ScrFI CCNGG 2 cut(s) 87, 525
SduI GDGCHC 1 cut(s) 862
SfaNI GCATC 3 cut(s) 72, 605, 1150
SfcI CTRYAG 1 cut(s) 738
SfoI GGCGCC 1 cut(s) 1344
SfuI TTCGAA 2 cut(s) 352, 427
SmiMI CAYNNNNRTG 5 cut(s) 45, 69, 80, 924, 945
Sse9I AATT 4 cut(s) 697, 814, 876, 1087
SsiI CCGC 6 cut(s) 228, 576, 579, 776, 810, 1303
SspDI GGCGCC 1 cut(s) 1342
SspI AATATT 1 cut(s) 868
SspMI CTAG 3 cut(s) 392, 432, 1197
StyD4I CCNGG 2 cut(s) 85, 523
StyI CCWWGG 2 cut(s) 206, 925
TaaI ACNGT 3 cut(s) 302, 671, 1257
TaiI ACGT 2 cut(s) 1055, 1206
TaqI TCGA 7 cut(s) 23, 168, 186, 352, 427, 945, 974
TasI AATT 4 cut(s) 697, 814, 876, 1087
TatI WGTACW 3 cut(s) 613, 1144, 1353
TauI GCSGC 3 cut(s) 230, 578, 581
TfiI GAWTC 2 cut(s) 349, 1318
Tru1I TTAA 4 cut(s) 666, 702, 789, 1209
Tru9I TTAA 4 cut(s) 666, 702, 789, 1209
TseFI GTSAC 4 cut(s) 304, 723, 823, 1251
TseI GCWGC 8 cut(s) 547, 655, 773, 985, 988, 991, 994, 1099
Tsp45I GTSAC 4 cut(s) 304, 723, 823, 1251
TspDTI ATGAA 5 cut(s) 458, 483, 740, 869, 1035
TspGWI ACGGA 3 cut(s) 812, 839, 1290
XapI RAATTY 1 cut(s) 814
XceI RCATGY 1 cut(s) 1145
XmiI GTMKAC 1 cut(s) 974
XmnI GAANNNNTTC 1 cut(s) 747
XspI CTAG 3 cut(s) 392, 432, 1197
ZrmI AGTACT 1 cut(s) 615
Zsp2I ATGCAT 1 cut(s) 598
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.