No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G13530 AT4G13530 |
| fragaria_vesca | FvH4_2g00770 FvH4_2g00770 |
| malus_domestica | MD05G1003400.v1.1 MD10G1004400.v1.1 |
| prunus_persica | Prupe.8G006800_v2.0.a1 Prupe.8G006800_v2.0.a1 |
| pyrus_communis | pycom05g00310 pycom10g00350 |
| rosa_chinensis | RchiOBHm_Chr6g0251151 |
| rosa_laevigata | RLG00000015479 |
| rosa_multiflora | Rmu_sc0001307.1_g000016 Rmu_sc0002219.1_g000020 Rmu_sc0014052.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00032260 Rroxscaffold_7G00216990 |
| rosa_rugosa | Rorug05G0500600 |
| rosa_samantha | Rh5CG360700 Rh6AG009700 Rh6BG002200 Rh6CG006400 Rh6DG006800 |
| rosa_wichuraiana | Rw6G000970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 7, 248 |
| AcsI | RAATTY | 1 cut(s) | 38 |
| AfaI | GTAC | 1 cut(s) | 257 |
| AgsI | TTSAA | 3 cut(s) | 60, 202, 217 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 173, 205 |
| AluBI | AGCT | 2 cut(s) | 24, 98 |
| AluI | AGCT | 2 cut(s) | 24, 98 |
| Alw26I | GTCTC | 1 cut(s) | 95 |
| ApeKI | GCWGC | 1 cut(s) | 250 |
| ApoI | RAATTY | 1 cut(s) | 38 |
| AsuHPI | GGTGA | 2 cut(s) | 164, 170 |
| BbsI | GAAGAC | 1 cut(s) | 228 |
| BbvI | GCAGC | 1 cut(s) | 237 |
| BcoDI | GTCTC | 1 cut(s) | 95 |
| BfmI | CTRYAG | 1 cut(s) | 251 |
| BisI | GCNGC | 2 cut(s) | 248, 251 |
| BlsI | GCNGC | 2 cut(s) | 249, 252 |
| BmcAI | AGTACT | 1 cut(s) | 257 |
| BmiI | GGNNCC | 1 cut(s) | 186 |
| BpiI | GAAGAC | 1 cut(s) | 228 |
| Bse1I | ACTGG | 1 cut(s) | 263 |
| BseMII | CTCAG | 1 cut(s) | 90 |
| BseNI | ACTGG | 1 cut(s) | 263 |
| BseXI | GCAGC | 1 cut(s) | 237 |
| BsmAI | GTCTC | 1 cut(s) | 95 |
| BspACI | CCGC | 2 cut(s) | 7, 248 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspLI | GGNNCC | 1 cut(s) | 186 |
| BspMAI | CTGCAG | 1 cut(s) | 255 |
| BsrI | ACTGG | 1 cut(s) | 263 |
| Bst4CI | ACNGT | 1 cut(s) | 136 |
| BstDEI | CTNAG | 1 cut(s) | 99 |
| BstMAI | GTCTC | 1 cut(s) | 95 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 259 |
| BstSFI | CTRYAG | 1 cut(s) | 251 |
| BstV1I | GCAGC | 1 cut(s) | 237 |
| BstV2I | GAAGAC | 1 cut(s) | 228 |
| BtsI | GCAGTG | 1 cut(s) | 123 |
| BtsIMutI | CAGTG | 1 cut(s) | 123 |
| Csp6I | GTAC | 1 cut(s) | 256 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 34, 69 |
| CviJI | RGCY | 3 cut(s) | 24, 98, 262 |
| CviKI_1 | RGCY | 3 cut(s) | 24, 98, 262 |
| CviQI | GTAC | 1 cut(s) | 256 |
| DdeI | CTNAG | 1 cut(s) | 99 |
| EciI | GGCGGA | 1 cut(s) | 22 |
| FaiI | YATR | 1 cut(s) | 175 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 155, 187 |
| Fnu4HI | GCNGC | 2 cut(s) | 248, 251 |
| Fsp4HI | GCNGC | 2 cut(s) | 248, 251 |
| GluI | GCNGC | 2 cut(s) | 248, 251 |
| HindIII | AAGCTT | 1 cut(s) | 22 |
| HinfI | GANTC | 5 cut(s) | 65, 77, 92, 103, 223 |
| HphI | GGTGA | 2 cut(s) | 164, 170 |
| HpyAV | CCTTC | 3 cut(s) | 4, 157, 175 |
| HpyCH4III | ACNGT | 1 cut(s) | 136 |
| HpyCH4V | TGCA | 2 cut(s) | 116, 253 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 259 |
| HpyF3I | CTNAG | 1 cut(s) | 99 |
| LpnPI | CCDG | 2 cut(s) | 132, 244 |
| Lsp1109I | GCAGC | 1 cut(s) | 237 |
| MaeIII | GTNAC | 1 cut(s) | 62 |
| MboII | GAAGA | 3 cut(s) | 101, 134, 228 |
| MluCI | AATT | 1 cut(s) | 38 |
| MlyI | GAGTC | 3 cut(s) | 59, 97, 232 |
| MnlI | CCTC | 4 cut(s) | 43, 148, 187, 250 |
| MspA1I | CMGCKG | 2 cut(s) | 98, 250 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 259 |
| NlaIV | GGNNCC | 1 cut(s) | 186 |
| NmuCI | GTSAC | 1 cut(s) | 62 |
| PfeI | GAWTC | 2 cut(s) | 77, 92 |
| PkrI | GCNGC | 2 cut(s) | 249, 252 |
| PleI | GAGTC | 3 cut(s) | 59, 97, 231 |
| PpsI | GAGTC | 3 cut(s) | 59, 97, 231 |
| PspN4I | GGNNCC | 1 cut(s) | 186 |
| PstI | CTGCAG | 1 cut(s) | 255 |
| PvuII | CAGCTG | 1 cut(s) | 98 |
| RsaI | GTAC | 1 cut(s) | 257 |
| RsaNI | GTAC | 1 cut(s) | 256 |
| SatI | GCNGC | 2 cut(s) | 248, 251 |
| ScaI | AGTACT | 1 cut(s) | 257 |
| SchI | GAGTC | 3 cut(s) | 59, 97, 232 |
| SetI | ASST | 6 cut(s) | 26, 100, 151, 168, 186, 198 |
| SfcI | CTRYAG | 1 cut(s) | 251 |
| SgeI | CNNG | 6 cut(s) | 37, 58, 72, 79, 85, 159 |
| Sse9I | AATT | 1 cut(s) | 38 |
| SsiI | CCGC | 2 cut(s) | 7, 248 |
| TaaI | ACNGT | 1 cut(s) | 136 |
| TaqI | TCGA | 1 cut(s) | 68 |
| TasI | AATT | 1 cut(s) | 38 |
| TatI | WGTACW | 1 cut(s) | 255 |
| TauI | GCSGC | 1 cut(s) | 250 |
| TfiI | GAWTC | 2 cut(s) | 77, 92 |
| TscAI | CASTG | 1 cut(s) | 123 |
| TseFI | GTSAC | 1 cut(s) | 62 |
| TseI | GCWGC | 1 cut(s) | 250 |
| Tsp45I | GTSAC | 1 cut(s) | 62 |
| TspDTI | ATGAA | 1 cut(s) | 102 |
| TspRI | CASTG | 1 cut(s) | 123 |
| XapI | RAATTY | 1 cut(s) | 38 |
| ZrmI | AGTACT | 1 cut(s) | 257 |