Rmu_sc0014052.1_g000003

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014052.1
Physical Location & Seq
Reverse (-)
7642 .. 7914
273 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014052.1_g000003.1.cds

Sequence Viewer

Length: 273 bp
atgtttcggtctgattctggcagagaaagcttggtttctgtgaaatttgacaaggagggtggttcaagtgactcgaacaaggaatcagcagatgaagaatcagctgagactcaaagtgttgcagtggaagaagcgaaaacggtggcgaagtcaggtggtgagggtgagaaggtggtcttatggtggaaggttccattggaggtgttgaagtattgtgttttcaaagtgagtcctatttggtcttcctctgtgccgctgcagtactggctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

90

Amino Acids

9.96

Weight (kDa)

4.81

Isoelectric Point (pI)

54.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 254
AcsI RAATTY 1 cut(s) 44
AfaI GTAC 1 cut(s) 263
AgsI TTSAA 3 cut(s) 66, 208, 223
AjuI GAANNNNNNNTTGG 2 cut(s) 179, 211
AluBI AGCT 2 cut(s) 30, 104
AluI AGCT 2 cut(s) 30, 104
Alw26I GTCTC 1 cut(s) 101
ApeKI GCWGC 1 cut(s) 256
ApoI RAATTY 1 cut(s) 44
AsuHPI GGTGA 2 cut(s) 170, 176
BbsI GAAGAC 1 cut(s) 234
BbvI GCAGC 1 cut(s) 243
BcoDI GTCTC 1 cut(s) 101
BfmI CTRYAG 1 cut(s) 257
BisI GCNGC 2 cut(s) 254, 257
BlsI GCNGC 2 cut(s) 255, 258
BmcAI AGTACT 1 cut(s) 263
BmiI GGNNCC 1 cut(s) 192
BpiI GAAGAC 1 cut(s) 234
Bse1I ACTGG 1 cut(s) 269
BseMII CTCAG 1 cut(s) 96
BseNI ACTGG 1 cut(s) 269
BseXI GCAGC 1 cut(s) 243
BsmAI GTCTC 1 cut(s) 101
BspACI CCGC 1 cut(s) 254
BspCNI CTCAG 1 cut(s) 97
BspLI GGNNCC 1 cut(s) 192
BspMAI CTGCAG 1 cut(s) 261
BsrI ACTGG 1 cut(s) 269
Bst4CI ACNGT 1 cut(s) 142
BstDEI CTNAG 1 cut(s) 105
BstMAI GTCTC 1 cut(s) 101
BstMWI GCNNNNNNNGC 2 cut(s) 27, 265
BstSFI CTRYAG 1 cut(s) 257
BstV1I GCAGC 1 cut(s) 243
BstV2I GAAGAC 1 cut(s) 234
BtsI GCAGTG 1 cut(s) 129
BtsIMutI CAGTG 1 cut(s) 129
Csp6I GTAC 1 cut(s) 262
CspCI CAANNNNNGTGG 2 cut(s) 40, 75
CviJI RGCY 3 cut(s) 30, 104, 268
CviKI_1 RGCY 3 cut(s) 30, 104, 268
CviQI GTAC 1 cut(s) 262
DdeI CTNAG 1 cut(s) 105
FaiI YATR 1 cut(s) 181
FalI AAGNNNNNCTT 2 cut(s) 161, 193
Fnu4HI GCNGC 2 cut(s) 254, 257
Fsp4HI GCNGC 2 cut(s) 254, 257
GluI GCNGC 2 cut(s) 254, 257
HindIII AAGCTT 1 cut(s) 28
HinfI GANTC 6 cut(s) 14, 71, 83, 98, 109, 229
HphI GGTGA 2 cut(s) 170, 176
Hpy188I TCNGA 1 cut(s) 13
HpyAV CCTTC 2 cut(s) 163, 181
HpyCH4III ACNGT 1 cut(s) 142
HpyCH4V TGCA 2 cut(s) 122, 259
HpyF10VI GCNNNNNNNGC 2 cut(s) 27, 265
HpyF3I CTNAG 1 cut(s) 105
LpnPI CCDG 3 cut(s) 3, 138, 250
Lsp1109I GCAGC 1 cut(s) 243
MaeIII GTNAC 1 cut(s) 68
MboII GAAGA 3 cut(s) 107, 140, 234
MluCI AATT 1 cut(s) 44
MlyI GAGTC 3 cut(s) 65, 103, 238
MnlI CCTC 4 cut(s) 49, 154, 193, 256
MspA1I CMGCKG 2 cut(s) 104, 256
MwoI GCNNNNNNNGC 2 cut(s) 27, 265
NlaIV GGNNCC 1 cut(s) 192
NmuCI GTSAC 1 cut(s) 68
PfeI GAWTC 3 cut(s) 14, 83, 98
PkrI GCNGC 2 cut(s) 255, 258
PleI GAGTC 3 cut(s) 65, 103, 237
PpsI GAGTC 3 cut(s) 65, 103, 237
PspN4I GGNNCC 1 cut(s) 192
PstI CTGCAG 1 cut(s) 261
PvuII CAGCTG 1 cut(s) 104
RsaI GTAC 1 cut(s) 263
RsaNI GTAC 1 cut(s) 262
SatI GCNGC 2 cut(s) 254, 257
ScaI AGTACT 1 cut(s) 263
SchI GAGTC 3 cut(s) 65, 103, 238
SetI ASST 6 cut(s) 32, 106, 157, 174, 192, 204
SfcI CTRYAG 1 cut(s) 257
SgeI CNNG 7 cut(s) 30, 43, 64, 78, 85, 91, 165
Sse9I AATT 1 cut(s) 44
SsiI CCGC 1 cut(s) 254
TaaI ACNGT 1 cut(s) 142
TaqI TCGA 1 cut(s) 74
TasI AATT 1 cut(s) 44
TatI WGTACW 1 cut(s) 261
TauI GCSGC 1 cut(s) 256
TfiI GAWTC 3 cut(s) 14, 83, 98
TscAI CASTG 1 cut(s) 129
TseFI GTSAC 1 cut(s) 68
TseI GCWGC 1 cut(s) 256
Tsp45I GTSAC 1 cut(s) 68
TspDTI ATGAA 1 cut(s) 108
TspRI CASTG 1 cut(s) 129
XapI RAATTY 1 cut(s) 44
ZrmI AGTACT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.