F-box LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g04250 |
| rosa_laevigata | RLG00000014989 RLG00000014994 |
| rosa_multiflora | Rmu_sc0000331.1_g000017 Rmu_sc0001351.1_g000005 Rmu_sc0001351.1_g000011 Rmu_sc0006378.1_g000001 Rmu_sc0006378.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00211680 |
| rosa_rugosa | Rorug05G0545400 Rorug05G0545400 Rorug05G0546100 |
| rosa_samantha | Rh6AG061600 Rh6AG061700 Rh6BG055200 Rh6CG054700 Rh6DG052200 Rh6DG052700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 717 |
| Acc16I | TGCGCA | 1 cut(s) | 1160 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1117 |
| AccI | GTMKAC | 2 cut(s) | 565, 1327 |
| AciI | CCGC | 1 cut(s) | 519 |
| AclWI | GGATC | 3 cut(s) | 599, 920, 1517 |
| AcoI | YGGCCR | 2 cut(s) | 1171, 1394 |
| AcsI | RAATTY | 4 cut(s) | 337, 437, 844, 1077 |
| AcvI | CACGTG | 2 cut(s) | 865, 1429 |
| AfeI | AGCGCT | 1 cut(s) | 816 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 225, 575, 965, 1117, 1258 |
| AflII | CTTAAG | 1 cut(s) | 398 |
| AflIII | ACRYGT | 2 cut(s) | 188, 862 |
| AgsI | TTSAA | 9 cut(s) | 86, 386, 586, 671, 685, 706, 761, 850, 955 |
| AhlI | ACTAGT | 1 cut(s) | 556 |
| AjiI | CACGTC | 1 cut(s) | 242 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 194, 226, 429, 461 |
| AluBI | AGCT | 9 cut(s) | 256, 315, 391, 911, 922, 1092, 1237, 1273, 1299 |
| AluI | AGCT | 9 cut(s) | 256, 315, 391, 911, 922, 1092, 1237, 1273, 1299 |
| Alw26I | GTCTC | 1 cut(s) | 1126 |
| AlwI | GGATC | 3 cut(s) | 599, 920, 1517 |
| Ama87I | CYCGRG | 2 cut(s) | 96, 929 |
| Aor51HI | AGCGCT | 1 cut(s) | 816 |
| AoxI | GGCC | 2 cut(s) | 1171, 1394 |
| ApeKI | GCWGC | 4 cut(s) | 315, 318, 321, 425 |
| ApoI | RAATTY | 4 cut(s) | 337, 437, 844, 1077 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 63, 390 |
| AspLEI | GCGC | 2 cut(s) | 817, 1161 |
| AspS9I | GGNCC | 2 cut(s) | 331, 1005 |
| AsuC2I | CCSGG | 2 cut(s) | 930, 931 |
| AsuHPI | GGTGA | 3 cut(s) | 736, 946, 1273 |
| AsuII | TTCGAA | 2 cut(s) | 113, 973 |
| AvaI | CYCGRG | 2 cut(s) | 96, 929 |
| AvaII | GGWCC | 2 cut(s) | 331, 1005 |
| BalI | TGGCCA | 1 cut(s) | 1396 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 776, 808 |
| BbrPI | CACGTG | 2 cut(s) | 865, 1429 |
| BbsI | GAAGAC | 4 cut(s) | 93, 639, 768, 1443 |
| BbvI | GCAGC | 4 cut(s) | 302, 305, 308, 437 |
| BccI | CCATC | 6 cut(s) | 145, 340, 685, 1326, 1501, 1535 |
| BceAI | ACGGC | 2 cut(s) | 772, 1053 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 32 |
| BclI | TGATCA | 1 cut(s) | 289 |
| BcnI | CCSGG | 2 cut(s) | 930, 931 |
| BcoDI | GTCTC | 1 cut(s) | 1126 |
| BcuI | ACTAGT | 1 cut(s) | 556 |
| BfaI | CTAG | 2 cut(s) | 557, 923 |
| BfoI | RGCGCY | 1 cut(s) | 818 |
| BfrI | CTTAAG | 1 cut(s) | 398 |
| BisI | GCNGC | 4 cut(s) | 316, 319, 322, 426 |
| BlsI | GCNGC | 4 cut(s) | 317, 320, 323, 427 |
| Bme1390I | CCNGG | 2 cut(s) | 930, 931 |
| Bme18I | GGWCC | 2 cut(s) | 331, 1005 |
| BmeT110I | CYCGRG | 2 cut(s) | 96, 929 |
| BmgBI | CACGTC | 1 cut(s) | 242 |
| BmgT120I | GGNCC | 2 cut(s) | 331, 1005 |
| BmiI | GGNNCC | 2 cut(s) | 217, 517 |
| BmrFI | CCNGG | 2 cut(s) | 930, 931 |
| BmsI | GCATC | 4 cut(s) | 163, 478, 621, 780 |
| BpiI | GAAGAC | 4 cut(s) | 93, 639, 768, 1443 |
| Bpu14I | TTCGAA | 2 cut(s) | 113, 973 |
| BpuEI | CTTGAG | 1 cut(s) | 904 |
| BpuMI | CCSGG | 2 cut(s) | 930, 931 |
| BsaAI | YACGTR | 3 cut(s) | 433, 865, 1429 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1192, 1198, 1488 |
| BsaI | GGTCTC | 1 cut(s) | 1126 |
| BsaJI | CCNNGG | 6 cut(s) | 219, 327, 511, 929, 930, 1397 |
| BsaWI | WCCGGW | 1 cut(s) | 1360 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1296, 1326 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 225, 575, 965, 1117, 1258 |
| Bse1I | ACTGG | 2 cut(s) | 862, 1183 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1192, 1198, 1488 |
| BseDI | CCNNGG | 6 cut(s) | 219, 327, 511, 929, 930, 1397 |
| BseGI | GGATG | 6 cut(s) | 133, 251, 351, 771, 1105, 1489 |
| BseJI | GATNNNNATC | 3 cut(s) | 1192, 1198, 1488 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 225, 575, 965, 1117, 1258 |
| BseMII | CTCAG | 2 cut(s) | 158, 903 |
| BseNI | ACTGG | 2 cut(s) | 862, 1183 |
| BseRI | GAGGAG | 1 cut(s) | 1304 |
| BseXI | GCAGC | 4 cut(s) | 302, 305, 308, 437 |
| BsgI | GTGCAG | 1 cut(s) | 813 |
| BshFI | GGCC | 2 cut(s) | 1173, 1396 |
| BsiHKCI | CYCGRG | 2 cut(s) | 96, 929 |
| BsiSI | CCGG | 3 cut(s) | 930, 1174, 1361 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 225, 575, 965, 1117, 1258 |
| BsmAI | GTCTC | 1 cut(s) | 1126 |
| BsmI | GAATGC | 2 cut(s) | 1143, 1414 |
| BsnI | GGCC | 2 cut(s) | 1173, 1396 |
| Bso31I | GGTCTC | 1 cut(s) | 1126 |
| BsoBI | CYCGRG | 2 cut(s) | 96, 929 |
| Bsp119I | TTCGAA | 2 cut(s) | 113, 973 |
| Bsp143I | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| BspACI | CCGC | 1 cut(s) | 519 |
| BspANI | GGCC | 2 cut(s) | 1173, 1396 |
| BspCNI | CTCAG | 2 cut(s) | 157, 904 |
| BspHI | TCATGA | 2 cut(s) | 286, 894 |
| BspLI | GGNNCC | 2 cut(s) | 217, 517 |
| BspPI | GGATC | 3 cut(s) | 599, 920, 1517 |
| BspQI | GCTCTTC | 1 cut(s) | 381 |
| BspT104I | TTCGAA | 2 cut(s) | 113, 973 |
| BspTI | CTTAAG | 1 cut(s) | 398 |
| BspTNI | GGTCTC | 1 cut(s) | 1126 |
| BsrI | ACTGG | 2 cut(s) | 862, 1183 |
| BssECI | CCNNGG | 6 cut(s) | 219, 327, 511, 929, 930, 1397 |
| BssMI | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| BssNAI | GTATAC | 1 cut(s) | 566 |
| BssT1I | CCWWGG | 4 cut(s) | 219, 327, 511, 1397 |
| Bst1107I | GTATAC | 1 cut(s) | 566 |
| Bst4CI | ACNGT | 3 cut(s) | 627, 809, 1325 |
| Bst6I | CTCTTC | 1 cut(s) | 381 |
| BstAFI | CTTAAG | 1 cut(s) | 398 |
| BstBAI | YACGTR | 3 cut(s) | 433, 865, 1429 |
| BstBI | TTCGAA | 2 cut(s) | 113, 973 |
| BstC8I | GCNNGC | 4 cut(s) | 11, 769, 1171, 1239 |
| BstDEI | CTNAG | 2 cut(s) | 144, 912 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 223, 1256 |
| BstF5I | GGATG | 6 cut(s) | 133, 251, 351, 771, 1105, 1489 |
| BstH2I | RGCGCY | 1 cut(s) | 818 |
| BstHHI | GCGC | 2 cut(s) | 817, 1161 |
| BstKTI | GATC | 6 cut(s) | 40, 292, 594, 928, 1196, 1525 |
| BstMAI | GTCTC | 1 cut(s) | 1126 |
| BstMBI | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 321, 1393 |
| BstNSI | RCATGY | 2 cut(s) | 192, 771 |
| BstSCI | CCNGG | 2 cut(s) | 928, 929 |
| BstV1I | GCAGC | 4 cut(s) | 302, 305, 308, 437 |
| BstV2I | GAAGAC | 4 cut(s) | 93, 639, 768, 1443 |
| BstX2I | RGATCY | 2 cut(s) | 591, 925 |
| BstYI | RGATCY | 2 cut(s) | 591, 925 |
| BstZ17I | GTATAC | 1 cut(s) | 566 |
| BsuRI | GGCC | 2 cut(s) | 1173, 1396 |
| BtgZI | GCGATG | 1 cut(s) | 1513 |
| BtrI | CACGTC | 1 cut(s) | 242 |
| BtsCI | GGATG | 6 cut(s) | 133, 251, 351, 771, 1105, 1489 |
| BtsIMutI | CAGTG | 1 cut(s) | 168 |
| Cac8I | GCNNGC | 4 cut(s) | 11, 769, 1171, 1239 |
| CciI | TCATGA | 2 cut(s) | 286, 894 |
| CfoI | GCGC | 2 cut(s) | 817, 1161 |
| Cfr13I | GGNCC | 2 cut(s) | 331, 1005 |
| Cfr9I | CCCGGG | 1 cut(s) | 929 |
| CseI | GACGC | 1 cut(s) | 773 |
| CviAII | CATG | 7 cut(s) | 189, 287, 487, 768, 895, 965, 1009 |
| DdeI | CTNAG | 2 cut(s) | 144, 912 |
| DpnI | GATC | 6 cut(s) | 39, 291, 593, 927, 1195, 1524 |
| DpnII | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| DraI | TTTAAA | 2 cut(s) | 465, 1131 |
| EaeI | YGGCCR | 2 cut(s) | 1171, 1394 |
| Eam1104I | CTCTTC | 1 cut(s) | 381 |
| EarI | CTCTTC | 1 cut(s) | 381 |
| Eco130I | CCWWGG | 4 cut(s) | 219, 327, 511, 1397 |
| Eco31I | GGTCTC | 1 cut(s) | 1126 |
| Eco47I | GGWCC | 2 cut(s) | 331, 1005 |
| Eco47III | AGCGCT | 1 cut(s) | 816 |
| Eco72I | CACGTG | 2 cut(s) | 865, 1429 |
| Eco88I | CYCGRG | 2 cut(s) | 96, 929 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 223, 1256 |
| EcoO109I | RGGNCCY | 1 cut(s) | 331 |
| EcoRI | GAATTC | 2 cut(s) | 337, 1077 |
| EcoT14I | CCWWGG | 4 cut(s) | 219, 327, 511, 1397 |
| EcoT22I | ATGCAT | 2 cut(s) | 614, 773 |
| ErhI | CCWWGG | 4 cut(s) | 219, 327, 511, 1397 |
| FaeI | CATG | 7 cut(s) | 192, 290, 490, 771, 898, 968, 1012 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 664, 696 |
| FatI | CATG | 7 cut(s) | 188, 286, 486, 767, 894, 964, 1008 |
| FbaI | TGATCA | 1 cut(s) | 289 |
| FblI | GTMKAC | 2 cut(s) | 565, 1327 |
| Fnu4HI | GCNGC | 4 cut(s) | 316, 319, 322, 426 |
| FokI | GGATG | 6 cut(s) | 120, 258, 358, 758, 1112, 1496 |
| Fsp4HI | GCNGC | 4 cut(s) | 316, 319, 322, 426 |
| FspBI | CTAG | 2 cut(s) | 557, 923 |
| FspI | TGCGCA | 1 cut(s) | 1160 |
| GlaI | GCGC | 2 cut(s) | 816, 1160 |
| GluI | GCNGC | 4 cut(s) | 316, 319, 322, 426 |
| HaeII | RGCGCY | 1 cut(s) | 818 |
| HaeIII | GGCC | 2 cut(s) | 1173, 1396 |
| HapII | CCGG | 3 cut(s) | 930, 1174, 1361 |
| HgaI | GACGC | 1 cut(s) | 773 |
| HhaI | GCGC | 2 cut(s) | 817, 1161 |
| Hin1II | CATG | 7 cut(s) | 192, 290, 490, 771, 898, 968, 1012 |
| Hin6I | GCGC | 2 cut(s) | 815, 1159 |
| HinP1I | GCGC | 2 cut(s) | 815, 1159 |
| HincII | GTYRAC | 2 cut(s) | 24, 552 |
| HindII | GTYRAC | 2 cut(s) | 24, 552 |
| HindIII | AAGCTT | 2 cut(s) | 1090, 1235 |
| HinfI | GANTC | 7 cut(s) | 15, 20, 99, 164, 235, 1293, 1510 |
| HpaII | CCGG | 3 cut(s) | 930, 1174, 1361 |
| HphI | GGTGA | 3 cut(s) | 736, 946, 1273 |
| Hpy166II | GTNNAC | 6 cut(s) | 24, 552, 566, 693, 1111, 1328 |
| Hpy188I | TCNGA | 5 cut(s) | 651, 1000, 1382, 1498, 1515 |
| Hpy188III | TCNNGA | 8 cut(s) | 44, 56, 232, 287, 293, 536, 895, 989 |
| Hpy8I | GTNNAC | 6 cut(s) | 24, 552, 566, 693, 1111, 1328 |
| Hpy99I | CGWCG | 1 cut(s) | 243 |
| HpyAV | CCTTC | 3 cut(s) | 82, 293, 1377 |
| HpyCH4III | ACNGT | 3 cut(s) | 627, 809, 1325 |
| HpyCH4IV | ACGT | 5 cut(s) | 241, 412, 432, 864, 1428 |
| HpyCH4V | TGCA | 9 cut(s) | 9, 176, 456, 606, 612, 771, 830, 1231, 1336 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 321, 1393 |
| HpyF3I | CTNAG | 2 cut(s) | 144, 912 |
| HpySE526I | ACGT | 5 cut(s) | 241, 412, 432, 864, 1428 |
| Hsp92II | CATG | 7 cut(s) | 192, 290, 490, 771, 898, 968, 1012 |
| HspAI | GCGC | 2 cut(s) | 815, 1159 |
| Ksp22I | TGATCA | 1 cut(s) | 289 |
| Kzo9I | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| LguI | GCTCTTC | 1 cut(s) | 381 |
| LmnI | GCTCC | 3 cut(s) | 521, 812, 1363 |
| Lsp1109I | GCAGC | 4 cut(s) | 302, 305, 308, 437 |
| LweI | GCATC | 4 cut(s) | 163, 478, 621, 780 |
| MaeI | CTAG | 2 cut(s) | 557, 923 |
| MaeII | ACGT | 5 cut(s) | 241, 412, 432, 864, 1428 |
| MaeIII | GTNAC | 3 cut(s) | 191, 742, 1261 |
| MalI | GATC | 6 cut(s) | 39, 291, 593, 927, 1195, 1524 |
| MboI | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| MboII | GAAGA | 6 cut(s) | 32, 98, 398, 644, 773, 1448 |
| MfeI | CAATTG | 1 cut(s) | 1331 |
| MflI | RGATCY | 2 cut(s) | 591, 925 |
| MlsI | TGGCCA | 1 cut(s) | 1396 |
| MluCI | AATT | 8 cut(s) | 337, 437, 620, 718, 727, 844, 1077, 1331 |
| MluNI | TGGCCA | 1 cut(s) | 1396 |
| MlyI | GAGTC | 2 cut(s) | 29, 108 |
| MmeI | TCCRAC | 1 cut(s) | 609 |
| MnlI | CCTC | 9 cut(s) | 101, 192, 219, 568, 703, 1018, 1159, 1252, 1325 |
| Mox20I | TGGCCA | 1 cut(s) | 1396 |
| Mph1103I | ATGCAT | 2 cut(s) | 614, 773 |
| MroXI | GAANNNNTTC | 2 cut(s) | 63, 390 |
| MscI | TGGCCA | 1 cut(s) | 1396 |
| Msp20I | TGGCCA | 1 cut(s) | 1396 |
| MspCI | CTTAAG | 1 cut(s) | 398 |
| MspI | CCGG | 3 cut(s) | 930, 1174, 1361 |
| MspR9I | CCNGG | 2 cut(s) | 930, 931 |
| MunI | CAATTG | 1 cut(s) | 1331 |
| Mva1269I | GAATGC | 2 cut(s) | 1143, 1414 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 321, 1393 |
| NciI | CCSGG | 2 cut(s) | 930, 931 |
| NdeII | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| NlaIII | CATG | 7 cut(s) | 192, 290, 490, 771, 898, 968, 1012 |
| NlaIV | GGNNCC | 2 cut(s) | 217, 517 |
| NmuCI | GTSAC | 3 cut(s) | 191, 742, 1261 |
| NsbI | TGCGCA | 1 cut(s) | 1160 |
| NsiI | ATGCAT | 2 cut(s) | 614, 773 |
| NspI | RCATGY | 2 cut(s) | 192, 771 |
| NspV | TTCGAA | 2 cut(s) | 113, 973 |
| PaeI | GCATGC | 1 cut(s) | 771 |
| PaeR7I | CTCGAG | 1 cut(s) | 96 |
| PagI | TCATGA | 2 cut(s) | 286, 894 |
| PciI | ACATGT | 1 cut(s) | 188 |
| PciSI | GCTCTTC | 1 cut(s) | 381 |
| PctI | GAATGC | 2 cut(s) | 1143, 1414 |
| PdmI | GAANNNNTTC | 2 cut(s) | 63, 390 |
| PfeI | GAWTC | 5 cut(s) | 15, 164, 235, 1293, 1510 |
| PflFI | GACNNNGTC | 1 cut(s) | 1106 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1117 |
| PkrI | GCNGC | 4 cut(s) | 317, 320, 323, 427 |
| PleI | GAGTC | 2 cut(s) | 28, 107 |
| PmaCI | CACGTG | 2 cut(s) | 865, 1429 |
| PmlI | CACGTG | 2 cut(s) | 865, 1429 |
| PpsI | GAGTC | 2 cut(s) | 28, 107 |
| Ppu21I | YACGTR | 3 cut(s) | 433, 865, 1429 |
| PpuMI | RGGWCCY | 1 cut(s) | 331 |
| PscI | ACATGT | 1 cut(s) | 188 |
| PsiI | TTATAA | 1 cut(s) | 717 |
| Psp5II | RGGWCCY | 1 cut(s) | 331 |
| PspCI | CACGTG | 2 cut(s) | 865, 1429 |
| PspN4I | GGNNCC | 2 cut(s) | 217, 517 |
| PspPI | GGNCC | 2 cut(s) | 331, 1005 |
| PspPPI | RGGWCCY | 1 cut(s) | 331 |
| PspXI | VCTCGAGB | 1 cut(s) | 96 |
| PsuI | RGATCY | 2 cut(s) | 591, 925 |
| PsyI | GACNNNGTC | 1 cut(s) | 1106 |
| SapI | GCTCTTC | 1 cut(s) | 381 |
| SatI | GCNGC | 4 cut(s) | 316, 319, 322, 426 |
| Sau3AI | GATC | 6 cut(s) | 37, 289, 591, 925, 1193, 1522 |
| Sau96I | GGNCC | 2 cut(s) | 331, 1005 |
| SchI | GAGTC | 2 cut(s) | 29, 108 |
| ScrFI | CCNGG | 2 cut(s) | 930, 931 |
| SfaNI | GCATC | 4 cut(s) | 163, 478, 621, 780 |
| Sfr274I | CTCGAG | 1 cut(s) | 96 |
| SfuI | TTCGAA | 2 cut(s) | 113, 973 |
| SinI | GGWCC | 2 cut(s) | 331, 1005 |
| SlaI | CTCGAG | 1 cut(s) | 96 |
| SmaI | CCCGGG | 1 cut(s) | 931 |
| SmlI | CTYRAG | 3 cut(s) | 96, 398, 883 |
| SmoI | CTYRAG | 3 cut(s) | 96, 398, 883 |
| SpeI | ACTAGT | 1 cut(s) | 556 |
| SphI | GCATGC | 1 cut(s) | 771 |
| Sse9I | AATT | 8 cut(s) | 337, 437, 620, 718, 727, 844, 1077, 1331 |
| SsiI | CCGC | 1 cut(s) | 519 |
| SspI | AATATT | 2 cut(s) | 499, 1506 |
| SspMI | CTAG | 2 cut(s) | 557, 923 |
| StyD4I | CCNGG | 2 cut(s) | 928, 929 |
| StyI | CCWWGG | 4 cut(s) | 219, 327, 511, 1397 |
| TaaI | ACNGT | 3 cut(s) | 627, 809, 1325 |
| TaiI | ACGT | 5 cut(s) | 244, 415, 435, 867, 1431 |
| TaqI | TCGA | 7 cut(s) | 18, 97, 113, 238, 360, 537, 973 |
| TasI | AATT | 8 cut(s) | 337, 437, 620, 718, 727, 844, 1077, 1331 |
| TfiI | GAWTC | 5 cut(s) | 15, 164, 235, 1293, 1510 |
| TscAI | CASTG | 1 cut(s) | 175 |
| TseFI | GTSAC | 3 cut(s) | 191, 742, 1261 |
| TseI | GCWGC | 4 cut(s) | 315, 318, 321, 425 |
| Tsp45I | GTSAC | 3 cut(s) | 191, 742, 1261 |
| TspGWI | ACGGA | 1 cut(s) | 948 |
| TspMI | CCCGGG | 1 cut(s) | 929 |
| TspRI | CASTG | 1 cut(s) | 175 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1106 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1117 |
| Vha464I | CTTAAG | 1 cut(s) | 398 |
| VpaK11BI | GGWCC | 2 cut(s) | 331, 1005 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 223, 1256 |
| XapI | RAATTY | 4 cut(s) | 337, 437, 844, 1077 |
| XceI | RCATGY | 2 cut(s) | 192, 771 |
| XhoI | CTCGAG | 1 cut(s) | 96 |
| XmaI | CCCGGG | 1 cut(s) | 929 |
| XmiI | GTMKAC | 2 cut(s) | 565, 1327 |
| XmnI | GAANNNNTTC | 2 cut(s) | 63, 390 |
| XspI | CTAG | 2 cut(s) | 557, 923 |
| Zsp2I | ATGCAT | 2 cut(s) | 614, 773 |