Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001755.1

Orthogroup ID

OG0015694

Physical Location & Seq

Genomic Coordinates Forward (+)

77837 .. 80590

Gene Structure 2754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

atggtttcctcacgtctattcctttctcccattttgttactgatcatcatcattagtaccacggatcaagcggcccaccttgctcagccgcagccggcggctgatttgctaaattacttctgttcaaaagacaaaggtaactacacgaccgactcctatcgcacagaccttaacaacctcctcttatcgcttccctctaccaagggcaacggctttggcttttacaattcctcctatggcggaaatacatcgtccgaggcaatatatgcaatcggactgtgtaaaggagatatcggaaccacaagcgactgccttcaatgcctcgatgcctctagaagtgctctcatggagctatgtcccaatcagaaagaggccattatttggtacgacaactgcatgctgcgctattcaaaccgctccatatatggtgtcaaggaaacgcagccaactattgatatgtggagcacacaaagggtaccatcatccaaatttgatatgctttttcgcaataatctcaccatcttactcgaaagattaggaattgaagctgcagcaggtggttctctgaagtttgcgaaagataacgcaaccattctcaactatagtaacggcggactgtcatccttaacggcacttgtgcagtgcactcctgatttgtccgagttacagtgcaggacttgcttatttggggcttttgaagaactcccgaaatgttgttatggaaaggaaggtgggcgagttcttagacccagctgtaacttcaggtatcagctggaccaggttgactggaccaatgcctcaagtcccgagtcaggatctccaagtgaaagccctgggatagctccacgtatcgttataccacttgcaatggttgtttccgttggactaataatctccgtaggcatctacatgaaagtagagaagagaaggccacaacctatcccagggatgcaacctaatatttttgagacaatggaatccttgcaattcgactgtggcgacattcgagttgccacaaataacttttctgaagcaaataaacttggagatgatgaatatggcactgtttacaggggtagtctttccaacgacaaaagcatagcagtgaggaggctttcaataaattatgtgaaagagtacacagaaattaagaaagaggttttgttaatggcgcccaagcttcaacatccaaatctagttgagctcctagggtgtgccttggaagaaaattctgaaaggcttcttgtctacgagcttttccctaacgcaactcttgatcgcatcatatttgaccgaatgcagagcagacaatgggattgggagatgcggtacaacatcatagtgagcattgcacggggactccttcaccttcatgacagtcactttgttcatggcgatgtcaacgctggtaacattttgatagatgcagaaatgaatcccaaaatttcaaattttggcatggcaagattctttgcggttgatcaaatacaaggcaacgttaacggaattcatctgctgaatctgatgtctaacacatacatggctccagaggcaaatgttggacattcatctgcggaatctgatgtctacagttttggtgcgttagtcgtggagatagtaagtggacaagaaattagtagtttggcttcagaaaagctaaatgaggaggatcttctgagatttgcatggaagaattgggcagaagggacaattagaaatctaatagacccaacgttgtggactggttcaggaattgaattaatggagagatgcatcagaatcggattattgtgtatgcagaggactagaaccgataggccaaccatgtcttctgttactcagatgattagtcattcttccgctatccctctacctaataaatttaggcatggtagctttgggatcattggaaccttgaacaatgtggaaggtgtttctgatccaaggtctagagcaaaagttcaacccttcattgcgaagatgcggtgttccactaccggtatcatcaataagatacgtagaaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

675

Amino Acids

75.05

Weight (kDa)

6.26

Isoelectric Point (pI)

41.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	41 - 139	7.1e-22	Salt stress response/antifungal
Stress-antifung	PF01657	167 - 257	9.7e-10	Salt stress response/antifungal
Pkinase	PF00069	343 - 614	4.3e-29	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	345 - 614	9.1e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015694)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g25911
rosa_chinensis	RchiOBHm_Chr1g0372241 RchiOBHm_Chr1g0372291
rosa_laevigata	RLG00000026912 RLG00000026913 RLG00000026914
rosa_multiflora	Rmu_sc0001755.1_g000014 Rmu_sc0001755.1_g000017
rosa_roxburghii	Rroxscaffold_4G00285090 Rroxscaffold_4G00285120
rosa_rugosa	Rorug01G0370700
rosa_samantha	Rh1BG342500 Rh1CG356100 Rh1CG356200 Rh1DG373700 Rh1DG373900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	545
Acc36I	ACCTGC	1 cut(s)	545
Acc65I	GGTACC	1 cut(s)	475
AccB1I	GGYRCC	2 cut(s)	475, 1171
AccB7I	CCANNNNNTGG	1 cut(s)	381
AccBSI	CCGCTC	1 cut(s)	417
AccI	GTMKAC	2 cut(s)	1248, 1587
AclI	AACGTT	2 cut(s)	1497, 1733
AclWI	GGATC	5 cut(s)	72, 823, 1677, 1910, 1934
AcsI	RAATTY	6 cut(s)	488, 1228, 1443, 1450, 1506, 1880
AcuI	CTGAAG	4 cut(s)	587, 745, 1050, 1632
AcyI	GRCGYC	1 cut(s)	1172
AfaI	GTAC	5 cut(s)	58, 386, 477, 1139, 1331
AfiI	CCNNNNNNNGG	3 cut(s)	381, 812, 944
AgeI	ACCGGT	1 cut(s)	1997
AjiI	CACGTC	1 cut(s)	14
AjnI	CCWGG	3 cut(s)	777, 832, 943
AjuI	GAANNNNNNNTTGG	2 cut(s)	1813, 1845
Alw21I	GWGCWC	4 cut(s)	343, 467, 647, 1206
Alw26I	GTCTC	1 cut(s)	962
Alw44I	GTGCAC	1 cut(s)	643
AlwI	GGATC	5 cut(s)	72, 823, 1677, 1910, 1934
Ama87I	CYCGRG	1 cut(s)	806
AoxI	GGCC	4 cut(s)	72, 372, 929, 1817
ApaLI	GTGCAC	1 cut(s)	643
ApeKI	GCWGC	5 cut(s)	91, 400, 442, 548, 551
ApoI	RAATTY	6 cut(s)	488, 1228, 1443, 1450, 1506, 1880
ArsI	GACNNNNNNTTYG	2 cut(s)	1367, 1399
AseI	ATTAAT	1 cut(s)	1760
AsiGI	ACCGGT	1 cut(s)	1997
Asp700I	GAANNNNTTC	1 cut(s)	1239
Asp718I	GGTACC	1 cut(s)	475
AspA2I	CCTAGG	1 cut(s)	1207
AspLEI	GCGC	2 cut(s)	405, 1174
AspS9I	GGNCC	3 cut(s)	73, 775, 789
AsuHPI	GGTGA	2 cut(s)	508, 1358
AvaI	CYCGRG	1 cut(s)	806
AvaII	GGWCC	2 cut(s)	775, 789
AvrII	CCTAGG	1 cut(s)	1207
BaeGI	GKGCMC	1 cut(s)	647
BanI	GGYRCC	2 cut(s)	475, 1171
BanII	GRGCYC	1 cut(s)	1206
BarI	GAAGNNNNNNTAC	2 cut(s)	1630, 1662
BbsI	GAAGAC	1 cut(s)	1821
Bbv12I	GWGCWC	4 cut(s)	343, 467, 647, 1206
BbvI	GCAGC	5 cut(s)	103, 387, 454, 535, 563
BccI	CCATC	2 cut(s)	487, 527
BceAI	ACGGC	3 cut(s)	226, 625, 645
BcgI	CGANNNNNNTGC	2 cut(s)	1762, 1796
BciT130I	CCWGG	3 cut(s)	779, 834, 945
BclI	TGATCA	2 cut(s)	42, 1480
BcoDI	GTCTC	1 cut(s)	962
BfaI	CTAG	5 cut(s)	333, 1196, 1208, 1806, 1950
BfmI	CTRYAG	3 cut(s)	549, 601, 1588
BfoI	RGCGCY	1 cut(s)	1175
BfuAI	ACCTGC	1 cut(s)	545
BisI	GCNGC	8 cut(s)	72, 89, 92, 99, 401, 443, 549, 552
BlnI	CCTAGG	1 cut(s)	1207
BlpI	GCTNAGC	1 cut(s)	84
BlsI	GCNGC	8 cut(s)	73, 90, 93, 100, 402, 444, 550, 553
Bme1390I	CCNGG	3 cut(s)	779, 834, 945
Bme18I	GGWCC	2 cut(s)	775, 789
BmeT110I	CYCGRG	1 cut(s)	806
BmgBI	CACGTC	1 cut(s)	14
BmgT120I	GGNCC	3 cut(s)	73, 775, 789
BmiI	GGNNCC	5 cut(s)	298, 477, 1173, 1545, 1912
BmrFI	CCNGG	3 cut(s)	779, 834, 945
BmsI	GCATC	9 cut(s)	316, 912, 939, 1290, 1314, 1414, 1760, 1782, 1971
BpiI	GAAGAC	1 cut(s)	1821
BpmI	CTGGAG	1 cut(s)	1530
Bpu1102I	GCTNAGC	1 cut(s)	84
BpuEI	CTTGAG	1 cut(s)	784
BsaAI	YACGTR	2 cut(s)	848, 2018
BsaBI	GATNNNNATC	1 cut(s)	47
BsaHI	GRCGYC	1 cut(s)	1172
BsaWI	WCCGGW	1 cut(s)	1997
BsaXI	ACNNNNNCTCC	6 cut(s)	215, 245, 1313, 1343, 1344, 1374
Bsc4I	CCNNNNNNNGG	3 cut(s)	381, 812, 944
Bse118I	RCCGGY	2 cut(s)	94, 1997
Bse1I	ACTGG	2 cut(s)	791, 1747
Bse3DI	GCAATG	3 cut(s)	873, 1347, 1971
Bse8I	GATNNNNATC	1 cut(s)	47
BseBI	CCWGG	3 cut(s)	779, 834, 945
BseGI	GGATG	4 cut(s)	482, 620, 954, 1186
BseJI	GATNNNNATC	1 cut(s)	47
BseLI	CCNNNNNNNGG	3 cut(s)	381, 812, 944
BseMI	GCAATG	3 cut(s)	873, 1347, 1971
BseMII	CTCAG	3 cut(s)	98, 1667, 1853
BseNI	ACTGG	2 cut(s)	791, 1747
BseRI	GAGGAG	3 cut(s)	170, 1123, 1679
BseSI	GKGCMC	1 cut(s)	647
BseXI	GCAGC	5 cut(s)	103, 387, 454, 535, 563
BseYI	CCCAGC	1 cut(s)	749
BsgI	GTGCAG	2 cut(s)	659, 691
Bsh1285I	CGRYCG	1 cut(s)	150
BshFI	GGCC	4 cut(s)	74, 374, 931, 1819
BshNI	GGYRCC	2 cut(s)	475, 1171
BshTI	ACCGGT	1 cut(s)	1997
BsiEI	CGRYCG	1 cut(s)	150
BsiHKAI	GWGCWC	4 cut(s)	343, 467, 647, 1206
BsiHKCI	CYCGRG	1 cut(s)	806
BsiSI	CCGG	2 cut(s)	95, 1998
BslFI	GGGAC	4 cut(s)	342, 789, 1371, 1720
BslI	CCNNNNNNNGG	3 cut(s)	381, 812, 944
BsmAI	GTCTC	1 cut(s)	962
BsmFI	GGGAC	4 cut(s)	342, 789, 1371, 1720
BsmI	GAATGC	1 cut(s)	1302
BsnI	GGCC	4 cut(s)	74, 374, 931, 1819
BsoBI	CYCGRG	1 cut(s)	806
Bsp1286I	GDGCHC	4 cut(s)	343, 467, 647, 1206
Bsp143I	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
Bsp1720I	GCTNAGC	1 cut(s)	84
BspANI	GGCC	4 cut(s)	74, 374, 931, 1819
BspCNI	CTCAG	3 cut(s)	97, 1668, 1852
BspHI	TCATGA	1 cut(s)	1372
BspLI	GGNNCC	5 cut(s)	298, 477, 1173, 1545, 1912
BspMAI	CTGCAG	1 cut(s)	553
BspMI	ACCTGC	1 cut(s)	545
BspPI	GGATC	5 cut(s)	72, 823, 1677, 1910, 1934
BspT107I	GGYRCC	2 cut(s)	475, 1171
BsrBI	CCGCTC	1 cut(s)	417
BsrDI	GCAATG	3 cut(s)	873, 1347, 1971
BsrFI	RCCGGY	2 cut(s)	94, 1997
BsrI	ACTGG	2 cut(s)	791, 1747
BssAI	RCCGGY	2 cut(s)	94, 1997
BssMI	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
BssNI	GRCGYC	1 cut(s)	1172
BssT1I	CCWWGG	4 cut(s)	201, 1207, 1218, 1943
Bst2UI	CCWGG	3 cut(s)	779, 834, 945
Bst4CI	ACNGT	7 cut(s)	279, 618, 669, 995, 1066, 1379, 1592
Bst6I	CTCTTC	1 cut(s)	917
BstACI	GRCGYC	1 cut(s)	1172
BstAPI	GCANNNNNTGC	2 cut(s)	266, 678
BstBAI	YACGTR	2 cut(s)	848, 2018
BstC8I	GCNNGC	2 cut(s)	96, 398
BstDEI	CTNAG	4 cut(s)	84, 743, 1676, 1839
BstDSI	CCRYGG	1 cut(s)	60
BstENI	CCTNNNNNAGG	1 cut(s)	942
BstF5I	GGATG	4 cut(s)	482, 620, 954, 1186
BstH2I	RGCGCY	1 cut(s)	1175
BstHHI	GCGC	2 cut(s)	405, 1174
BstKTI	GATC	8 cut(s)	45, 67, 818, 1279, 1483, 1672, 1905, 1942
BstMAI	GTCTC	1 cut(s)	962
BstMBI	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
BstMCI	CGRYCG	1 cut(s)	150
BstMWI	GCNNNNNNNGC	6 cut(s)	80, 266, 318, 402, 678, 1550
BstNI	CCWGG	3 cut(s)	779, 834, 945
BstNSI	RCATGY	1 cut(s)	400
BstSCI	CCNGG	3 cut(s)	777, 832, 943
BstSFI	CTRYAG	3 cut(s)	549, 601, 1588
BstSLI	GKGCMC	1 cut(s)	647
BstSNI	TACGTA	1 cut(s)	2018
BstV1I	GCAGC	5 cut(s)	103, 387, 454, 535, 563
BstV2I	GAAGAC	1 cut(s)	1821
BstX2I	RGATCY	2 cut(s)	815, 1669
BstXI	CCANNNNNNTGG	1 cut(s)	1737
BstYI	RGATCY	2 cut(s)	815, 1669
BsuRI	GGCC	4 cut(s)	74, 374, 931, 1819
BtgI	CCRYGG	1 cut(s)	60
BtgZI	GCGATG	1 cut(s)	1410
BtrI	CACGTC	1 cut(s)	14
BtsCI	GGATG	4 cut(s)	482, 620, 954, 1186
BtsI	GCAGTG	2 cut(s)	647, 1110
BtsIMutI	CAGTG	4 cut(s)	647, 674, 1062, 1110
BveI	ACCTGC	1 cut(s)	545
Cac8I	GCNNGC	2 cut(s)	96, 398
CciI	TCATGA	1 cut(s)	1372
CfoI	GCGC	2 cut(s)	405, 1174
Cfr10I	RCCGGY	2 cut(s)	94, 1997
Cfr13I	GGNCC	3 cut(s)	73, 775, 789
CsiI	ACCWGGT	1 cut(s)	777
Csp6I	GTAC	5 cut(s)	57, 385, 476, 1138, 1330
CspAI	ACCGGT	1 cut(s)	1997
CviQI	GTAC	5 cut(s)	57, 385, 476, 1138, 1330
DdeI	CTNAG	4 cut(s)	84, 743, 1676, 1839
DinI	GGCGCC	1 cut(s)	1173
DpnI	GATC	8 cut(s)	44, 66, 817, 1278, 1482, 1671, 1904, 1941
DpnII	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
Eam1104I	CTCTTC	1 cut(s)	917
EarI	CTCTTC	1 cut(s)	917
EciI	GGCGGA	2 cut(s)	255, 627
Ecl136II	GAGCTC	1 cut(s)	1204
Eco105I	TACGTA	1 cut(s)	2018
Eco130I	CCWWGG	4 cut(s)	201, 1207, 1218, 1943
Eco24I	GRGCYC	1 cut(s)	1206
Eco32I	GATATC	1 cut(s)	292
Eco47I	GGWCC	2 cut(s)	775, 789
Eco53kI	GAGCTC	1 cut(s)	1204
Eco57I	CTGAAG	4 cut(s)	587, 745, 1050, 1632
Eco88I	CYCGRG	1 cut(s)	806
EcoICRI	GAGCTC	1 cut(s)	1204
EcoNI	CCTNNNNNAGG	1 cut(s)	942
EcoRI	GAATTC	1 cut(s)	1506
EcoRII	CCWGG	3 cut(s)	777, 832, 943
EcoRV	GATATC	1 cut(s)	292
EcoT14I	CCWWGG	4 cut(s)	201, 1207, 1218, 1943
EcoT22I	ATGCAT	1 cut(s)	1775
EcoT38I	GRGCYC	1 cut(s)	1206
EgeI	GGCGCC	1 cut(s)	1173
EheI	GGCGCC	1 cut(s)	1173
ErhI	CCWWGG	4 cut(s)	201, 1207, 1218, 1943
FaqI	GGGAC	4 cut(s)	342, 789, 1371, 1720
FbaI	TGATCA	2 cut(s)	42, 1480
FblI	GTMKAC	2 cut(s)	1248, 1587
Fnu4HI	GCNGC	8 cut(s)	72, 89, 92, 99, 401, 443, 549, 552
FokI	GGATG	4 cut(s)	469, 607, 961, 1173
FriOI	GRGCYC	1 cut(s)	1206
Fsp4HI	GCNGC	8 cut(s)	72, 89, 92, 99, 401, 443, 549, 552
FspBI	CTAG	5 cut(s)	333, 1196, 1208, 1806, 1950
GlaI	GCGC	2 cut(s)	404, 1173
GluI	GCNGC	8 cut(s)	72, 89, 92, 99, 401, 443, 549, 552
GsaI	CCCAGC	1 cut(s)	753
GsuI	CTGGAG	1 cut(s)	1530
HaeII	RGCGCY	1 cut(s)	1175
HaeIII	GGCC	4 cut(s)	74, 374, 931, 1819
HapII	CCGG	2 cut(s)	95, 1998
HhaI	GCGC	2 cut(s)	405, 1174
Hin1I	GRCGYC	1 cut(s)	1172
Hin6I	GCGC	2 cut(s)	403, 1172
HinP1I	GCGC	2 cut(s)	403, 1172
HincII	GTYRAC	3 cut(s)	784, 1402, 1501
HindII	GTYRAC	3 cut(s)	784, 1402, 1501
HindIII	AAGCTT	1 cut(s)	1178
HinfI	GANTC	9 cut(s)	152, 809, 977, 1359, 1435, 1467, 1519, 1577, 1779
HpaI	GTTAAC	1 cut(s)	1501
HpaII	CCGG	2 cut(s)	95, 1998
HphI	GGTGA	2 cut(s)	508, 1358
HpyAV	CCTTC	8 cut(s)	323, 722, 921, 1373, 1379, 1697, 1922, 1978
HpyCH4III	ACNGT	7 cut(s)	279, 618, 669, 995, 1066, 1379, 1592
HpyCH4IV	ACGT	5 cut(s)	13, 847, 1497, 1733, 2017
HpyF10VI	GCNNNNNNNGC	6 cut(s)	80, 266, 318, 402, 678, 1550
HpyF3I	CTNAG	4 cut(s)	84, 743, 1676, 1839
HpySE526I	ACGT	5 cut(s)	13, 847, 1497, 1733, 2017
Hsp92I	GRCGYC	1 cut(s)	1172
HspAI	GCGC	2 cut(s)	403, 1172
KasI	GGCGCC	1 cut(s)	1171
KpnI	GGTACC	1 cut(s)	479
KroI	GCCGGC	1 cut(s)	94
KroNI	GCCGGC	1 cut(s)	96
Ksp22I	TGATCA	2 cut(s)	42, 1480
KspAI	GTTAAC	1 cut(s)	1501
Kzo9I	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
LmnI	GCTCC	6 cut(s)	349, 422, 462, 847, 1209, 1549
Lsp1109I	GCAGC	5 cut(s)	103, 387, 454, 535, 563
LweI	GCATC	9 cut(s)	316, 912, 939, 1290, 1314, 1414, 1760, 1782, 1971
MabI	ACCWGGT	1 cut(s)	777
MaeI	CTAG	5 cut(s)	333, 1196, 1208, 1806, 1950
MaeII	ACGT	5 cut(s)	13, 847, 1497, 1733, 2017
MaeIII	GTNAC	8 cut(s)	36, 137, 605, 663, 755, 1379, 1409, 1834
MalI	GATC	8 cut(s)	44, 66, 817, 1278, 1482, 1671, 1904, 1941
MbiI	CCGCTC	1 cut(s)	417
MboI	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
MboII	GAAGA	8 cut(s)	710, 934, 1235, 1664, 1702, 1821, 1848, 1990
MflI	RGATCY	2 cut(s)	815, 1669
MhlI	GDGCHC	4 cut(s)	343, 467, 647, 1206
Mly113I	GGCGCC	1 cut(s)	1172
MlyI	GAGTC	3 cut(s)	146, 818, 1353
MmeI	TCCRAC	3 cut(s)	862, 1110, 1540
Mph1103I	ATGCAT	1 cut(s)	1775
MroNI	GCCGGC	1 cut(s)	94
MroXI	GAANNNNTTC	1 cut(s)	1239
MseI	TTAA	6 cut(s)	171, 626, 1149, 1166, 1500, 1760
MslI	CAYNNNNRTG	6 cut(s)	908, 1103, 1340, 1371, 1395, 1538
MspA1I	CMGCKG	2 cut(s)	753, 772
MspI	CCGG	2 cut(s)	95, 1998
MspR9I	CCNGG	3 cut(s)	779, 834, 945
Mva1269I	GAATGC	1 cut(s)	1302
MvaI	CCWGG	3 cut(s)	779, 834, 945
MwoI	GCNNNNNNNGC	6 cut(s)	80, 266, 318, 402, 678, 1550
NaeI	GCCGGC	1 cut(s)	96
NarI	GGCGCC	1 cut(s)	1172
NdeII	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
NgoMIV	GCCGGC	1 cut(s)	94
NlaIV	GGNNCC	5 cut(s)	298, 477, 1173, 1545, 1912
NmuCI	GTSAC	1 cut(s)	1379
NsiI	ATGCAT	1 cut(s)	1775
NspI	RCATGY	1 cut(s)	400
PaeI	GCATGC	1 cut(s)	400
PagI	TCATGA	1 cut(s)	1372
PaqCI	CACCTGC	1 cut(s)	545
PasI	CCCWGGG	2 cut(s)	833, 944
PcsI	WCGNNNNNNNCGW	1 cut(s)	996
PctI	GAATGC	1 cut(s)	1302
PdiI	GCCGGC	1 cut(s)	96
PdmI	GAANNNNTTC	1 cut(s)	1239
PfeI	GAWTC	6 cut(s)	977, 1435, 1467, 1519, 1577, 1779
PflMI	CCANNNNNTGG	1 cut(s)	381
PinAI	ACCGGT	1 cut(s)	1997
PkrI	GCNGC	8 cut(s)	73, 90, 93, 100, 402, 444, 550, 553
PleI	GAGTC	3 cut(s)	146, 817, 1353
PluTI	GGCGCC	1 cut(s)	1175
PpsI	GAGTC	3 cut(s)	146, 817, 1353
Ppu21I	YACGTR	2 cut(s)	848, 2018
PshBI	ATTAAT	1 cut(s)	1760
Psp124BI	GAGCTC	1 cut(s)	1206
Psp1406I	AACGTT	2 cut(s)	1497, 1733
Psp6I	CCWGG	3 cut(s)	777, 832, 943
PspFI	CCCAGC	1 cut(s)	749
PspGI	CCWGG	3 cut(s)	777, 832, 943
PspN4I	GGNNCC	5 cut(s)	298, 477, 1173, 1545, 1912
PspPI	GGNCC	3 cut(s)	73, 775, 789
PstI	CTGCAG	1 cut(s)	553
PsuI	RGATCY	2 cut(s)	815, 1669
PvuII	CAGCTG	2 cut(s)	753, 772
RsaI	GTAC	5 cut(s)	58, 386, 477, 1139, 1331
RsaNI	GTAC	5 cut(s)	57, 385, 476, 1138, 1330
RseI	CAYNNNNRTG	6 cut(s)	908, 1103, 1340, 1371, 1395, 1538
SacI	GAGCTC	1 cut(s)	1206
SaqAI	TTAA	6 cut(s)	171, 626, 1149, 1166, 1500, 1760
SatI	GCNGC	8 cut(s)	72, 89, 92, 99, 401, 443, 549, 552
Sau3AI	GATC	8 cut(s)	42, 64, 815, 1276, 1480, 1669, 1902, 1939
Sau96I	GGNCC	3 cut(s)	73, 775, 789
SchI	GAGTC	3 cut(s)	146, 818, 1353
ScrFI	CCNGG	3 cut(s)	779, 834, 945
SduI	GDGCHC	4 cut(s)	343, 467, 647, 1206
SexAI	ACCWGGT	1 cut(s)	777
SfaNI	GCATC	9 cut(s)	316, 912, 939, 1290, 1314, 1414, 1760, 1782, 1971
SfcI	CTRYAG	3 cut(s)	549, 601, 1588
SfoI	GGCGCC	1 cut(s)	1173
SinI	GGWCC	2 cut(s)	775, 789
SmiMI	CAYNNNNRTG	6 cut(s)	908, 1103, 1340, 1371, 1395, 1538
SmlI	CTYRAG	1 cut(s)	799
SmoI	CTYRAG	1 cut(s)	799
SnaBI	TACGTA	1 cut(s)	2018
SphI	GCATGC	1 cut(s)	400
SspDI	GGCGCC	1 cut(s)	1171
SspI	AATATT	1 cut(s)	961
SspMI	CTAG	5 cut(s)	333, 1196, 1208, 1806, 1950
SstI	GAGCTC	1 cut(s)	1206
StyD4I	CCNGG	3 cut(s)	777, 832, 943
StyI	CCWWGG	4 cut(s)	201, 1207, 1218, 1943
TaaI	ACNGT	7 cut(s)	279, 618, 669, 995, 1066, 1379, 1592
TaiI	ACGT	5 cut(s)	16, 850, 1500, 1736, 2020
TaqI	TCGA	4 cut(s)	324, 528, 990, 1006
TaqII	GACCGA	2 cut(s)	164, 1308
TatI	WGTACW	1 cut(s)	1137
TauI	GCSGC	3 cut(s)	74, 91, 101
TfiI	GAWTC	6 cut(s)	977, 1435, 1467, 1519, 1577, 1779
Tru1I	TTAA	6 cut(s)	171, 626, 1149, 1166, 1500, 1760
Tru9I	TTAA	6 cut(s)	171, 626, 1149, 1166, 1500, 1760
TscAI	CASTG	4 cut(s)	647, 674, 1069, 1110
TseFI	GTSAC	1 cut(s)	1379
TseI	GCWGC	5 cut(s)	91, 400, 442, 548, 551
Tsp45I	GTSAC	1 cut(s)	1379
TspDTI	ATGAA	8 cut(s)	926, 1068, 1361, 1379, 1448, 1499, 1557, 1960
TspGWI	ACGGA	4 cut(s)	77, 868, 886, 1518
TspRI	CASTG	4 cut(s)	647, 674, 1069, 1110
Van91I	CCANNNNNTGG	1 cut(s)	381
VneI	GTGCAC	1 cut(s)	643
VpaK11BI	GGWCC	2 cut(s)	775, 789
VspI	ATTAAT	1 cut(s)	1760
XagI	CCTNNNNNAGG	1 cut(s)	942
XapI	RAATTY	6 cut(s)	488, 1228, 1443, 1450, 1506, 1880
XbaI	TCTAGA	2 cut(s)	332, 1949
XceI	RCATGY	1 cut(s)	400
XmaJI	CCTAGG	1 cut(s)	1207
XmiI	GTMKAC	2 cut(s)	1248, 1587
XmnI	GAANNNNTTC	1 cut(s)	1239
XspI	CTAG	5 cut(s)	333, 1196, 1208, 1806, 1950
Zsp2I	ATGCAT	1 cut(s)	1775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.