Rmu_sc0001782.1_g000008

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001782.1
OG0008149
Physical Location & Seq
Reverse (-)
55213 .. 55512
300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001782.1_g000008.1.cds

Sequence Viewer

Length: 300 bp
atggatttagaagacccccgcgagaagagagccttcaatgaagaagaactaatgcatcaatgctcggagatttcgaactccggaatggacaccatgtcgataacaatgcagtggacgatgtcgaatgtagtgaaatacccacgtcttcagaagaggcttgttgaagatattaaaaacgttgtggggattgaaaaaatagagctgaaagatgagaatcttcagaagatgcactacctaaaagcggtggtgatggaggctctaaggcttcacccaccaggccactatgtggtgccttattag

Protein Analysis

99

Amino Acids

11.68

Weight (kDa)

5.78

Isoelectric Point (pI)

74.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 289
AccB7I CCANNNNNTGG 1 cut(s) 286
AccII CGCG 1 cut(s) 21
AccIII TCCGGA 1 cut(s) 80
AciI CCGC 2 cut(s) 19, 242
AclI AACGTT 1 cut(s) 177
AcuI CTGAAG 2 cut(s) 131, 203
AdeI CACNNNGTG 1 cut(s) 286
AfiI CCNNNNNNNGG 2 cut(s) 241, 286
AgsI TTSAA 3 cut(s) 37, 164, 191
AhdI GACNNNNNGTC 1 cut(s) 94
AjiI CACGTC 1 cut(s) 143
AjnI CCWGG 1 cut(s) 274
AluBI AGCT 1 cut(s) 202
AluI AGCT 1 cut(s) 202
Aor13HI TCCGGA 1 cut(s) 80
AoxI GGCC 1 cut(s) 277
AsuHPI GGTGA 2 cut(s) 259, 260
AsuII TTCGAA 1 cut(s) 74
BanI GGYRCC 1 cut(s) 289
BarI GAAGNNNNNNTAC 2 cut(s) 215, 247
BbsI GAAGAC 2 cut(s) 18, 137
BccI CCATC 1 cut(s) 244
BcgI CGANNNNNNTGC 2 cut(s) 88, 122
BciT130I CCWGG 1 cut(s) 276
Bme1390I CCNGG 1 cut(s) 276
BmeRI GACNNNNNGTC 1 cut(s) 94
BmgBI CACGTC 1 cut(s) 143
BmiI GGNNCC 1 cut(s) 291
BmrFI CCNGG 1 cut(s) 276
BmsI GCATC 2 cut(s) 64, 216
BpiI GAAGAC 2 cut(s) 18, 137
Bpu14I TTCGAA 1 cut(s) 74
BsaBI GATNNNNATC 1 cut(s) 213
BsaWI WCCGGW 1 cut(s) 80
Bsc4I CCNNNNNNNGG 2 cut(s) 241, 286
Bse8I GATNNNNATC 1 cut(s) 213
BseAI TCCGGA 1 cut(s) 80
BseBI CCWGG 1 cut(s) 276
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 2 cut(s) 241, 286
Bsh1236I CGCG 1 cut(s) 21
BshFI GGCC 1 cut(s) 279
BshNI GGYRCC 1 cut(s) 289
BsiSI CCGG 1 cut(s) 81
BslI CCNNNNNNNGG 2 cut(s) 241, 286
BsnI GGCC 1 cut(s) 279
Bsp119I TTCGAA 1 cut(s) 74
Bsp13I TCCGGA 1 cut(s) 80
BspACI CCGC 2 cut(s) 19, 242
BspANI GGCC 1 cut(s) 279
BspEI TCCGGA 1 cut(s) 80
BspFNI CGCG 1 cut(s) 21
BspLI GGNNCC 1 cut(s) 291
BspT104I TTCGAA 1 cut(s) 74
BspT107I GGYRCC 1 cut(s) 289
Bst2UI CCWGG 1 cut(s) 276
Bst6I CTCTTC 2 cut(s) 20, 146
BstBI TTCGAA 1 cut(s) 74
BstDEI CTNAG 1 cut(s) 260
BstFNI CGCG 1 cut(s) 21
BstNI CCWGG 1 cut(s) 276
BstSCI CCNGG 1 cut(s) 274
BstUI CGCG 1 cut(s) 21
BstV2I GAAGAC 2 cut(s) 18, 137
BsuRI GGCC 1 cut(s) 279
BtrI CACGTC 1 cut(s) 143
BtsI GCAGTG 1 cut(s) 116
BtsIMutI CAGTG 1 cut(s) 116
CviAII CATG 1 cut(s) 94
CviJI RGCY 6 cut(s) 32, 157, 202, 257, 265, 279
CviKI_1 RGCY 6 cut(s) 32, 157, 202, 257, 265, 279
DdeI CTNAG 1 cut(s) 260
DraIII CACNNNGTG 1 cut(s) 286
DriI GACNNNNNGTC 1 cut(s) 94
Eam1104I CTCTTC 2 cut(s) 20, 146
Eam1105I GACNNNNNGTC 1 cut(s) 94
EarI CTCTTC 2 cut(s) 20, 146
Eco57I CTGAAG 2 cut(s) 131, 203
EcoRII CCWGG 1 cut(s) 274
EcoT22I ATGCAT 1 cut(s) 57
FaeI CATG 1 cut(s) 97
FaiI YATR 2 cut(s) 95, 285
FalI AAGNNNNNCTT 2 cut(s) 17, 49
FatI CATG 1 cut(s) 93
FauI CCCGC 1 cut(s) 26
HaeIII GGCC 1 cut(s) 279
HapII CCGG 1 cut(s) 81
Hin1II CATG 1 cut(s) 97
HinfI GANTC 1 cut(s) 214
HpaII CCGG 1 cut(s) 81
HphI GGTGA 2 cut(s) 259, 260
Hpy166II GTNNAC 1 cut(s) 114
Hpy188I TCNGA 3 cut(s) 67, 150, 222
Hpy188III TCNNGA 1 cut(s) 81
Hpy8I GTNNAC 1 cut(s) 114
HpyAV CCTTC 1 cut(s) 43
HpyCH4IV ACGT 2 cut(s) 142, 177
HpyCH4V TGCA 3 cut(s) 55, 109, 229
HpyF3I CTNAG 1 cut(s) 260
HpySE526I ACGT 2 cut(s) 142, 177
Hsp92II CATG 1 cut(s) 97
Kpn2I TCCGGA 1 cut(s) 80
LpnPI CCDG 3 cut(s) 94, 261, 288
LweI GCATC 2 cut(s) 64, 216
MaeII ACGT 2 cut(s) 142, 177
MboII GAAGA 9 cut(s) 23, 37, 53, 56, 137, 163, 176, 209, 235
MnlI CCTC 2 cut(s) 147, 247
Mph1103I ATGCAT 1 cut(s) 57
MroI TCCGGA 1 cut(s) 80
MseI TTAA 1 cut(s) 171
MspI CCGG 1 cut(s) 81
MspR9I CCNGG 1 cut(s) 276
MvaI CCWGG 1 cut(s) 276
MvnI CGCG 1 cut(s) 21
NlaIII CATG 1 cut(s) 97
NlaIV GGNNCC 1 cut(s) 291
NsiI ATGCAT 1 cut(s) 57
NspV TTCGAA 1 cut(s) 74
PcsI WCGNNNNNNNCGW 1 cut(s) 71
PfeI GAWTC 1 cut(s) 214
PflFI GACNNNGTC 1 cut(s) 118
PflMI CCANNNNNTGG 1 cut(s) 286
Psp1406I AACGTT 1 cut(s) 177
Psp6I CCWGG 1 cut(s) 274
PspGI CCWGG 1 cut(s) 274
PspN4I GGNNCC 1 cut(s) 291
PsyI GACNNNGTC 1 cut(s) 118
SaqAI TTAA 1 cut(s) 171
ScrFI CCNGG 1 cut(s) 276
SetI ASST 4 cut(s) 145, 180, 204, 237
SfaNI GCATC 2 cut(s) 64, 216
SfuI TTCGAA 1 cut(s) 74
SsiI CCGC 2 cut(s) 19, 242
StyD4I CCNGG 1 cut(s) 274
TaiI ACGT 2 cut(s) 145, 180
TaqI TCGA 3 cut(s) 74, 98, 122
TfiI GAWTC 1 cut(s) 214
Tru1I TTAA 1 cut(s) 171
Tru9I TTAA 1 cut(s) 171
TscAI CASTG 1 cut(s) 116
TspDTI ATGAA 1 cut(s) 54
TspRI CASTG 1 cut(s) 116
Tth111I GACNNNGTC 1 cut(s) 118
Van91I CCANNNNNTGG 1 cut(s) 286
Zsp2I ATGCAT 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.