Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001803.1

Orthogroup ID

OG0015588

Physical Location & Seq

Genomic Coordinates Forward (+)

143297 .. 147806

Gene Structure 4510 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001803.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3852 bp

atgtgtcgtataataatagctcctatagtctccggtgaaagtctcctctcaaataccacacatcatagacgtccagtagaatccaggcctctctcgcattcgacagtcccgacggctccagattcgacggaattgaccagcggcgacactgcattggtccttctctctctcctcggttctggagcatctaatgcaatgtcagaaatggataggtcattgaagcgtggttcaagtgatattggatgcggttttgaagaggcaaaagctaagaagaaacaaaaagctagagacgaagaggaagtgatggaagaagtcggagttattgtacaagaagaagcagaaattgaagggcaaaaaaaaaagcagcaagattccccagtgattcagctgatggaatcatcgtcagctctcatggttgaaaaccctgagccaaaatctggggataatcaggaatcagtggacctggatccctctacatctcttcgttcagcagatccttcgaagaagtatgatgtttttctgagtttcaggggtgcagacactcgtctgggtattgtatcccacttatacgatgaattgagagatgggagagggcttcgaacgttcatggatgacaaaaagcttgaactaggggatcatatttctcaaagtctgctaaaggcaattgaagaatccagttttgcaattgttgttttgtcaaagaactatgctgaatcaccatggtgtttggaggaacttacaaagatttgccaatgcatgaaagacaataacagaattataccggttttttatcatgtcgaacctactgatgtacggcatcagaagggtagttttgaaaatgctttcaaaaatcatgtaaacaatggacggcacaattcaaagaagctggagcggtggaaagaagctttaaaaacagttgccgatttctctggatataatgcaaaggataagactgataaagaagctgtcaaagccattgtggaatctctgtgcaagaaagtatggcctactgaaattgagtttattatttcctccagatattttgaagaatttgaagcaacaagacaagccatggacgatgtagtgaaggcgctaaaagatgaaaatgtcactgccgttggggtctacggcatgggaggcgtcggaaaaacaaccatggtggaacatgtcgctgtagaagcccaaaaaaaggggcttttccgtcaggtgattatggctaacatatcccaaaagcccaacttgtgggaaaagcccgacttgtgggaaaagctcaacttgtgggatattcaggaaaagcccaccttgttggatattcagagtggattggcacacatgttgggtttcaaatttgaagttgacggagaatttgcaagagcccgcgaattgaggaagtggataaagaagggagagaggattcttattatcttggacaacatttggaatgcaatagagttgacagacataggaattcccagttacgatgagcttaaaagacgcaattccaaggttctactcaccactaggagattgcaagtttgcggtgatatgaaatgtgacaaaaacattcctctcaataccttagctaaaaatgattcttggaatttgtttgtgaagatagcagaaacaccaaccaatttctatggcattgcaagtgaggtagcaggagaatgtgctggtcttccagttgcattgatagcagttgcaaaggcacttcggggtaaaaacttcggccaatggaaggaagctgctaggcgactaaaggcgtctaaaactacttcctgccctgaagatgaaagacgtgtatttaaatgcataaagtttagctatgattacttgatatctgatgactccaaattatgcttcttgctttgctgcctattcccagaggattatgacatccaaattgaagacttgctgaagtattggattggggaaggattgtttcaagagaacaaaatacaagacgccagagcggcaatatgttctgtggtccagtcccttaaagattctagcctacttttggatggtaaaagggacagaggatgcataaggatgcatgatgtcatcagagatgttgccatatcaatttccttatctatggatgggcaccgacggttttttgtaaaagctggttgtgagttagggagttggccaggaattgatgcacatgggcgctacaatgcaatctcactaatgaagaacaaaatccgcatgcttcccgatgacttggtatgttcagaactccaaattctcttgttacaaagtaatgtttatgagaacatcccagaagttttttttcaaagtctacagtcattaagggtcttagatcttagccagactcgcatttctttcctacccggatcattcaatcttctaagcagcctccacactctgtgtctaaatggttgcctgttaatgacaagtgacatatctctactgggaagattgagggaacttaagattcttagtatgagagaacttcgtcttgtgaaattgccagaagaaataggacaattgaccaacctaaggatgctggacttcactagtgaaggtgttgatatagttccttctaatgtgataggcaacctcagaaaattagaagaactgtacatgcagtgcaattttgcggactgggagagtgaagttgaggagagcgaagctgagggagcaagagaggaaactaatgctttctttgatgagttaactggcttacatctacatattttgaaggttttcatatctgatccaaaatgcttgcctacaaatgtagtggttatgccgaattggaaaagttttgatatctgtatcagtagtgaccgctcaattagagaatcgcttttgcatccaagttctccacttgattcaaaagccttgactcttgacacaaccatggataccttaccgaattggttttttgaggtggtgaccaagaaaacagagaagctacagtacataaactgttggggtttacgcaatcttcttgaggaatatttccaagggacattacatgcactgaagtatttacatgttattggtcccattgagatggaacagttgatgaccccaacaacacctgatcgaaatgaacgtgtgtttgagaatttggaagagttgcatctcgatagagtgaaatgtctgaaagagttatgtgttggtgaattacaaactgagtctctgtgcaagcttaggttactgaaggtgagtcattgtcataaattgatgaatgcacttctacaatctaatttgttgcagagactacaaaatctggaaatactaatttgtgaagagatggatgaattggagtatgtgtttgcatgtgaagtgtttgacgcagaacaaattactctgagaaaattgatagaaatgagattggggaagctagggagcctgataaagatatggaatggtcctgctccttgtgaaatcttttgtcatgttaaaattttggtggttttcgagtgctataagctgaaaaatctcttcacatctgacatagctcaatgtcttcatgaattggaagatctttcagtagaggcttgccaagcgttggagagagtttttgaagcaagtaaggaaacagtgaacgacaagataattttaccaaaattgaagatcttagctttgaaacagcttccgaagcttacaaggttctatggtagtactggaagtgctactaatgatgaagaaaatattgagtttcctttattggaacactcgcacgtggaccgctgccataatttcaaatctccagctatggacatgttggtttcagtgatgaataagcagcctgttttgattattatgcaagagacaggtcagagagagacacctactttaagcagaagaagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC TIR

Protein Analysis

1283

Amino Acids

145.75

Weight (kDa)

5.67

Isoelectric Point (pI)

48.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015588)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g44030 FvH4_3g44030
rosa_chinensis	RchiOBHm_Chr5g0079591 RchiOBHm_Chr5g0080151 RchiOBHm_Chr5g0080161 RchiOBHm_Chr5g0080261 RchiOBHm_Chr5g0080311
rosa_multiflora	Rmu_sc0001803.1_g000037 Rmu_sc0002513.1_g000013 Rmu_sc0007806.1_g000017 Rmu_sc0009793.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003050
rosa_rugosa	Rorug05G0468000
rosa_wichuraiana	Rw0G023400 Rw5G048450 Rw5G048480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	73
AccB1I	GGYRCC	1 cut(s)	2106
AccB7I	CCANNNNNTGG	3 cut(s)	437, 1242, 3547
AccBSI	CCGCTC	3 cut(s)	892, 1973, 2820
AccI	GTMKAC	2 cut(s)	1125, 2305
AccII	CGCG	1 cut(s)	1380
AclI	AACGTT	1 cut(s)	602
AclWI	GGATC	6 cut(s)	461, 474, 488, 642, 2368, 2738
AcoI	YGGCCR	2 cut(s)	1729, 2150
AcsI	RAATTY	8 cut(s)	1049, 1346, 1364, 1467, 1600, 2247, 3100, 3441
AcuI	CTGAAG	4 cut(s)	1806, 1937, 3035, 3215
AcvI	CACGTG	1 cut(s)	3721
AcyI	GRCGYC	4 cut(s)	70, 1140, 1763, 1965
AdeI	CACNNNGTG	1 cut(s)	2394
AfaI	GTAC	5 cut(s)	327, 813, 2609, 2951, 3661
AfiI	CCNNNNNNNGG	8 cut(s)	437, 1189, 1242, 1260, 1738, 2020, 2526, 3547
AflII	CTTAAG	1 cut(s)	2456
AflIII	ACRYGT	6 cut(s)	1165, 1332, 1798, 3025, 3088, 3759
AgeI	ACCGGT	1 cut(s)	781
AhlI	ACTAGT	1 cut(s)	2543
AjiI	CACGTC	1 cut(s)	1799
AjnI	CCWGG	3 cut(s)	83, 462, 2152
AjuI	GAANNNNNNNTTGG	2 cut(s)	1844, 1876
AleI	CACNNNNGTG	1 cut(s)	721
Alw26I	GTCTC	7 cut(s)	34, 47, 282, 3177, 3247, 3803, 3818
AlwI	GGATC	6 cut(s)	461, 474, 488, 642, 2368, 2738
AoxI	GGCC	4 cut(s)	86, 1004, 1729, 2150
ApeKI	GCWGC	6 cut(s)	364, 1745, 1872, 2379, 3729, 3784
ApoI	RAATTY	8 cut(s)	1049, 1346, 1364, 1467, 1600, 2247, 3100, 3441
ArsI	GACNNNNNNTTYG	2 cut(s)	1349, 1381
AsiGI	ACCGGT	1 cut(s)	781
Asp700I	GAANNNNTTC	1 cut(s)	2732
AspLEI	GCGC	2 cut(s)	1093, 2175
AspS9I	GGNCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
AsuC2I	CCSGG	1 cut(s)	2358
AsuHPI	GGTGA	8 cut(s)	47, 708, 1219, 1507, 1553, 2935, 3167, 3211
AsuII	TTCGAA	2 cut(s)	500, 598
AvaII	GGWCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
AxyI	CCTNAGG	1 cut(s)	2525
BaeGI	GKGCMC	1 cut(s)	2109
BalI	TGGCCA	1 cut(s)	2152
BamHI	GGATCC	1 cut(s)	466
BanI	GGYRCC	1 cut(s)	2106
BanII	GRGCYC	1 cut(s)	1378
BarI	GAAGNNNNNNTAC	2 cut(s)	2933, 2965
BbrPI	CACGTG	1 cut(s)	3721
BbsI	GAAGAC	3 cut(s)	1670, 1914, 3497
BbvCI	CCTCAGC	1 cut(s)	2661
BbvI	GCAGC	6 cut(s)	376, 1732, 1859, 2391, 3716, 3796
BccI	CCATC	7 cut(s)	298, 385, 578, 2018, 2096, 3040, 3283
BceAI	ACGGC	5 cut(s)	129, 830, 884, 1100, 1144
BcgI	CGANNNNNNTGC	2 cut(s)	480, 514
BciT130I	CCWGG	3 cut(s)	85, 464, 2154
BciVI	GTATCC	2 cut(s)	568, 2887
BcnI	CCSGG	1 cut(s)	2358
BcoDI	GTCTC	7 cut(s)	34, 47, 282, 3177, 3247, 3803, 3818
BcuI	ACTAGT	1 cut(s)	2543
BfaI	CTAG	7 cut(s)	285, 629, 1521, 1749, 2010, 2544, 3380
BfmI	CTRYAG	4 cut(s)	24, 1173, 2306, 2945
BfoI	RGCGCY	2 cut(s)	1094, 2176
BfrI	CTTAAG	1 cut(s)	2456
BfuI	GTATCC	2 cut(s)	568, 2887
BglI	GCCNNNNNGGC	1 cut(s)	1973
BglII	AGATCT	3 cut(s)	2326, 3520, 3612
BisI	GCNGC	8 cut(s)	142, 365, 1746, 1873, 1974, 2380, 3730, 3785
BlsI	GCNGC	8 cut(s)	143, 366, 1747, 1874, 1975, 2381, 3731, 3786
BmcAI	AGTACT	1 cut(s)	3661
Bme1390I	CCNGG	4 cut(s)	85, 464, 2154, 2358
Bme18I	GGWCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
BmgBI	CACGTC	1 cut(s)	1799
BmgT120I	GGNCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
BmiI	GGNNCC	5 cut(s)	117, 468, 2108, 3037, 3386
BmrFI	CCNGG	4 cut(s)	85, 464, 2154, 2358
BmrI	ACTGGG	4 cut(s)	371, 1467, 2447, 2641
BmsI	GCATC	9 cut(s)	194, 233, 826, 2033, 2043, 2152, 2520, 2851, 3124
BmuI	ACTGGG	4 cut(s)	371, 1467, 2447, 2641
BoxI	GACNNNNGTC	1 cut(s)	543
BpiI	GAAGAC	3 cut(s)	1670, 1914, 3497
BpmI	CTGGAG	5 cut(s)	102, 201, 908, 1018, 3732
Bpu10I	CCTNAGC	4 cut(s)	426, 1579, 2661, 3185
Bpu14I	TTCGAA	2 cut(s)	500, 598
BpuEI	CTTGAG	1 cut(s)	3002
BpuMI	CCSGG	1 cut(s)	2358
BsaAI	YACGTR	1 cut(s)	3721
BsaHI	GRCGYC	4 cut(s)	70, 1140, 1763, 1965
BsaJI	CCNNGG	7 cut(s)	172, 719, 1071, 1155, 1503, 2889, 2995
BsaWI	WCCGGW	2 cut(s)	32, 781
BsaXI	ACNNNNNCTCC	4 cut(s)	309, 339, 3293, 3323
Bsc4I	CCNNNNNNNGG	8 cut(s)	437, 1189, 1242, 1260, 1738, 2020, 2526, 3547
Bse118I	RCCGGY	1 cut(s)	781
Bse21I	CCTNAGG	1 cut(s)	2525
Bse3DI	GCAATG	2 cut(s)	201, 1644
BseBI	CCWGG	3 cut(s)	85, 464, 2154
BseDI	CCNNGG	7 cut(s)	172, 719, 1071, 1155, 1503, 2889, 2995
BseLI	CCNNNNNNNGG	8 cut(s)	437, 1189, 1242, 1260, 1738, 2020, 2526, 3547
BseMI	GCAATG	2 cut(s)	201, 1644
BseMII	CTCAG	6 cut(s)	417, 512, 2602, 2652, 3159, 3338
BseRI	GAGGAG	3 cut(s)	35, 161, 2663
BseSI	GKGCMC	1 cut(s)	2109
BseXI	GCAGC	6 cut(s)	376, 1732, 1859, 2391, 3716, 3796
BsgI	GTGCAG	1 cut(s)	555
Bsh1236I	CGCG	1 cut(s)	1380
BshFI	GGCC	4 cut(s)	88, 1006, 1731, 2152
BshNI	GGYRCC	1 cut(s)	2106
BshTI	ACCGGT	1 cut(s)	781
BsiSI	CCGG	3 cut(s)	33, 782, 2358
BslFI	GGGAC	5 cut(s)	92, 1981, 2048, 3013, 3021
BslI	CCNNNNNNNGG	8 cut(s)	437, 1189, 1242, 1260, 1738, 2020, 2526, 3547
BsmAI	GTCTC	7 cut(s)	34, 47, 282, 3177, 3247, 3803, 3818
BsmBI	CGTCTC	1 cut(s)	282
BsmFI	GGGAC	5 cut(s)	92, 1981, 2048, 3013, 3021
BsmI	GAATGC	3 cut(s)	97, 1447, 3229
BsnI	GGCC	4 cut(s)	88, 1006, 1731, 2152
Bsp119I	TTCGAA	2 cut(s)	500, 598
Bsp1286I	GDGCHC	2 cut(s)	1378, 2109
Bsp1407I	TGTACA	2 cut(s)	325, 2607
Bsp143I	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
Bsp19I	CCATGG	4 cut(s)	719, 1071, 1155, 2889
BspANI	GGCC	4 cut(s)	88, 1006, 1731, 2152
BspCNI	CTCAG	6 cut(s)	418, 513, 2601, 2653, 3160, 3339
BspFNI	CGCG	1 cut(s)	1380
BspHI	TCATGA	1 cut(s)	3508
BspLI	GGNNCC	5 cut(s)	117, 468, 2108, 3037, 3386
BspPI	GGATC	6 cut(s)	461, 474, 488, 642, 2368, 2738
BspT104I	TTCGAA	2 cut(s)	500, 598
BspT107I	GGYRCC	1 cut(s)	2106
BspTI	CTTAAG	1 cut(s)	2456
BsrBI	CCGCTC	3 cut(s)	892, 1973, 2820
BsrDI	GCAATG	2 cut(s)	201, 1644
BsrFI	RCCGGY	1 cut(s)	781
BsrGI	TGTACA	2 cut(s)	325, 2607
BssAI	RCCGGY	1 cut(s)	781
BssECI	CCNNGG	7 cut(s)	172, 719, 1071, 1155, 1503, 2889, 2995
BssMI	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
BssNI	GRCGYC	4 cut(s)	70, 1140, 1763, 1965
BssT1I	CCWWGG	6 cut(s)	719, 1071, 1155, 1503, 2889, 2995
Bst2UI	CCWGG	3 cut(s)	85, 464, 2154
Bst4CI	ACNGT	9 cut(s)	106, 916, 2115, 2310, 2607, 2949, 2960, 3054, 3580
Bst6I	CTCTTC	6 cut(s)	249, 288, 486, 3102, 3279, 3485
BstACI	GRCGYC	4 cut(s)	70, 1140, 1763, 1965
BstAFI	CTTAAG	1 cut(s)	2456
BstAPI	GCANNNNNTGC	1 cut(s)	191
BstAUI	TGTACA	2 cut(s)	325, 2607
BstBAI	YACGTR	1 cut(s)	3721
BstBI	TTCGAA	2 cut(s)	500, 598
BstC8I	GCNNGC	5 cut(s)	1378, 2213, 2756, 3182, 3538
BstDSI	CCRYGG	4 cut(s)	719, 1071, 1155, 2889
BstEII	GGTNACC	1 cut(s)	2923
BstFNI	CGCG	1 cut(s)	1380
BstH2I	RGCGCY	2 cut(s)	1094, 2176
BstHHI	GCGC	2 cut(s)	1093, 2175
BstKTI	GATC	9 cut(s)	469, 496, 637, 2329, 2363, 2746, 3079, 3523, 3615
BstMAI	GTCTC	7 cut(s)	34, 47, 282, 3177, 3247, 3803, 3818
BstMBI	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
BstNI	CCWGG	3 cut(s)	85, 464, 2154
BstNSI	RCATGY	8 cut(s)	1169, 1336, 2215, 2614, 3011, 3029, 3318, 3763
BstPAI	GACNNNNGTC	1 cut(s)	543
BstPI	GGTNACC	1 cut(s)	2923
BstSCI	CCNGG	4 cut(s)	83, 462, 2152, 2356
BstSFI	CTRYAG	4 cut(s)	24, 1173, 2306, 2945
BstSLI	GKGCMC	1 cut(s)	2109
BstUI	CGCG	1 cut(s)	1380
BstV1I	GCAGC	6 cut(s)	376, 1732, 1859, 2391, 3716, 3796
BstV2I	GAAGAC	3 cut(s)	1670, 1914, 3497
BstX2I	RGATCY	5 cut(s)	466, 493, 2326, 3520, 3612
BstXI	CCANNNNNNTGG	2 cut(s)	1306, 3046
BstYI	RGATCY	5 cut(s)	466, 493, 2326, 3520, 3612
Bsu36I	CCTNAGG	1 cut(s)	2525
BsuI	GTATCC	2 cut(s)	568, 2887
BsuRI	GGCC	4 cut(s)	88, 1006, 1731, 2152
BtgI	CCRYGG	4 cut(s)	719, 1071, 1155, 2889
BtrI	CACGTC	1 cut(s)	1799
BtsI	GCAGTG	3 cut(s)	147, 1110, 2621
BtsIMutI	CAGTG	8 cut(s)	147, 384, 462, 1110, 2621, 3011, 3585, 3777
Cac8I	GCNNGC	5 cut(s)	1378, 2213, 2756, 3182, 3538
CciI	TCATGA	1 cut(s)	3508
CfoI	GCGC	2 cut(s)	1093, 2175
Cfr10I	RCCGGY	1 cut(s)	781
Cfr13I	GGNCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
CseI	GACGC	5 cut(s)	1129, 1503, 1752, 1973, 3338
Csp6I	GTAC	5 cut(s)	326, 812, 2608, 2950, 3660
CspAI	ACCGGT	1 cut(s)	781
CspCI	CAANNNNNGTGG	4 cut(s)	1140, 1175, 2751, 2786
CviQI	GTAC	5 cut(s)	326, 812, 2608, 2950, 3660
DpnI	GATC	9 cut(s)	468, 495, 636, 2328, 2362, 2745, 3078, 3522, 3614
DpnII	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
DraI	TTTAAA	2 cut(s)	909, 1807
DraIII	CACNNNGTG	1 cut(s)	2394
EaeI	YGGCCR	2 cut(s)	1729, 2150
Eam1104I	CTCTTC	6 cut(s)	249, 288, 486, 3102, 3279, 3485
EarI	CTCTTC	6 cut(s)	249, 288, 486, 3102, 3279, 3485
Eco130I	CCWWGG	6 cut(s)	719, 1071, 1155, 1503, 2889, 2995
Eco147I	AGGCCT	1 cut(s)	88
Eco24I	GRGCYC	1 cut(s)	1378
Eco32I	GATATC	2 cut(s)	1839, 2800
Eco47I	GGWCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
Eco57I	CTGAAG	4 cut(s)	1806, 1937, 3035, 3215
Eco72I	CACGTG	1 cut(s)	3721
Eco81I	CCTNAGG	1 cut(s)	2525
Eco91I	GGTNACC	1 cut(s)	2923
EcoO65I	GGTNACC	1 cut(s)	2923
EcoRI	GAATTC	1 cut(s)	1467
EcoRII	CCWGG	3 cut(s)	83, 462, 2152
EcoRV	GATATC	2 cut(s)	1839, 2800
EcoT14I	CCWWGG	6 cut(s)	719, 1071, 1155, 1503, 2889, 2995
EcoT22I	ATGCAT	4 cut(s)	758, 1814, 2048, 2058
EcoT38I	GRGCYC	1 cut(s)	1378
ErhI	CCWWGG	6 cut(s)	719, 1071, 1155, 1503, 2889, 2995
Esp3I	CGTCTC	1 cut(s)	282
FalI	AAGNNNNNCTT	8 cut(s)	1223, 1255, 1241, 1273, 1259, 1291, 1286, 1318
FaqI	GGGAC	5 cut(s)	92, 1981, 2048, 3013, 3021
FauI	CCCGC	1 cut(s)	1385
FblI	GTMKAC	2 cut(s)	1125, 2305
Fnu4HI	GCNGC	8 cut(s)	142, 365, 1746, 1873, 1974, 2380, 3730, 3785
FriOI	GRGCYC	1 cut(s)	1378
Fsp4HI	GCNGC	8 cut(s)	142, 365, 1746, 1873, 1974, 2380, 3730, 3785
FspBI	CTAG	7 cut(s)	285, 629, 1521, 1749, 2010, 2544, 3380
GlaI	GCGC	2 cut(s)	1092, 2174
GluI	GCNGC	8 cut(s)	142, 365, 1746, 1873, 1974, 2380, 3730, 3785
GsuI	CTGGAG	5 cut(s)	102, 201, 908, 1018, 3732
HaeII	RGCGCY	2 cut(s)	1094, 2176
HaeIII	GGCC	4 cut(s)	88, 1006, 1731, 2152
HapII	CCGG	3 cut(s)	33, 782, 2358
HgaI	GACGC	5 cut(s)	1129, 1503, 1752, 1973, 3338
HhaI	GCGC	2 cut(s)	1093, 2175
Hin1I	GRCGYC	4 cut(s)	70, 1140, 1763, 1965
Hin6I	GCGC	2 cut(s)	1091, 2173
HinP1I	GCGC	2 cut(s)	1091, 2173
HincII	GTYRAC	3 cut(s)	1357, 1455, 2703
HindII	GTYRAC	3 cut(s)	1357, 1455, 2703
HindIII	AAGCTT	4 cut(s)	620, 903, 3182, 3638
HpaI	GTTAAC	1 cut(s)	2703
HpaII	CCGG	3 cut(s)	33, 782, 2358
HphI	GGTGA	8 cut(s)	47, 708, 1219, 1507, 1553, 2935, 3167, 3211
Hpy99I	CGWCG	4 cut(s)	115, 130, 1145, 2115
HpyCH4III	ACNGT	9 cut(s)	106, 916, 2115, 2310, 2607, 2949, 2960, 3054, 3580
HpyCH4IV	ACGT	5 cut(s)	70, 602, 1798, 3088, 3720
HpySE526I	ACGT	5 cut(s)	70, 602, 1798, 3088, 3720
Hsp92I	GRCGYC	4 cut(s)	70, 1140, 1763, 1965
HspAI	GCGC	2 cut(s)	1091, 2173
KspAI	GTTAAC	1 cut(s)	2703
Kzo9I	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
LmnI	GCTCC	7 cut(s)	25, 121, 182, 889, 2666, 3384, 3418
Lsp1109I	GCAGC	6 cut(s)	376, 1732, 1859, 2391, 3716, 3796
LweI	GCATC	9 cut(s)	194, 233, 826, 2033, 2043, 2152, 2520, 2851, 3124
MaeI	CTAG	7 cut(s)	285, 629, 1521, 1749, 2010, 2544, 3380
MaeII	ACGT	5 cut(s)	70, 602, 1798, 3088, 3720
MaeIII	GTNAC	8 cut(s)	1108, 1475, 1553, 2256, 2423, 2813, 2923, 3189
MalI	GATC	9 cut(s)	468, 495, 636, 2328, 2362, 2745, 3078, 3522, 3614
MbiI	CCGCTC	3 cut(s)	892, 1973, 2820
MboI	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
MfeI	CAATTG	3 cut(s)	663, 684, 2513
MflI	RGATCY	5 cut(s)	466, 493, 2326, 3520, 3612
MhlI	GDGCHC	2 cut(s)	1378, 2109
MlsI	TGGCCA	1 cut(s)	2152
MluNI	TGGCCA	1 cut(s)	2152
MlyI	GAGTC	5 cut(s)	1841, 2332, 2869, 3179, 3211
MmeI	TCCRAC	4 cut(s)	295, 1123, 1287, 3528
Mox20I	TGGCCA	1 cut(s)	2152
Mph1103I	ATGCAT	4 cut(s)	758, 1814, 2048, 2058
MroXI	GAANNNNTTC	1 cut(s)	2732
MscI	TGGCCA	1 cut(s)	2152
MslI	CAYNNNNRTG	4 cut(s)	721, 2051, 2888, 3044
Msp20I	TGGCCA	1 cut(s)	2152
MspA1I	CMGCKG	3 cut(s)	141, 388, 3729
MspCI	CTTAAG	1 cut(s)	2456
MspI	CCGG	3 cut(s)	33, 782, 2358
MspR9I	CCNGG	4 cut(s)	85, 464, 2154, 2358
MunI	CAATTG	3 cut(s)	663, 684, 2513
Mva1269I	GAATGC	3 cut(s)	97, 1447, 3229
MvaI	CCWGG	3 cut(s)	85, 464, 2154
MvnI	CGCG	1 cut(s)	1380
NciI	CCSGG	1 cut(s)	2358
NcoI	CCATGG	4 cut(s)	719, 1071, 1155, 2889
NdeII	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
NlaIV	GGNNCC	5 cut(s)	117, 468, 2108, 3037, 3386
NmuCI	GTSAC	5 cut(s)	1108, 1553, 2423, 2813, 2923
NsiI	ATGCAT	4 cut(s)	758, 1814, 2048, 2058
NspI	RCATGY	8 cut(s)	1169, 1336, 2215, 2614, 3011, 3029, 3318, 3763
NspV	TTCGAA	2 cut(s)	500, 598
OliI	CACNNNNGTG	1 cut(s)	721
PaeI	GCATGC	1 cut(s)	2215
PagI	TCATGA	1 cut(s)	3508
PceI	AGGCCT	1 cut(s)	88
PciI	ACATGT	4 cut(s)	1165, 1332, 3025, 3759
PcsI	WCGNNNNNNNCGW	2 cut(s)	107, 3085
PctI	GAATGC	3 cut(s)	97, 1447, 3229
PdmI	GAANNNNTTC	1 cut(s)	2732
PflMI	CCANNNNNTGG	3 cut(s)	437, 1242, 3547
PinAI	ACCGGT	1 cut(s)	781
PkrI	GCNGC	8 cut(s)	143, 366, 1747, 1874, 1975, 2381, 3731, 3786
PleI	GAGTC	5 cut(s)	1841, 2332, 2869, 3178, 3210
PmaCI	CACGTG	1 cut(s)	3721
PmlI	CACGTG	1 cut(s)	3721
PpsI	GAGTC	5 cut(s)	1841, 2332, 2869, 3178, 3210
Ppu21I	YACGTR	1 cut(s)	3721
PscI	ACATGT	4 cut(s)	1165, 1332, 3025, 3759
PshAI	GACNNNNGTC	1 cut(s)	543
Psp1406I	AACGTT	1 cut(s)	602
Psp6I	CCWGG	3 cut(s)	83, 462, 2152
PspCI	CACGTG	1 cut(s)	3721
PspEI	GGTNACC	1 cut(s)	2923
PspGI	CCWGG	3 cut(s)	83, 462, 2152
PspN4I	GGNNCC	5 cut(s)	117, 468, 2108, 3037, 3386
PspPI	GGNCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
PsuI	RGATCY	5 cut(s)	466, 493, 2326, 3520, 3612
PvuII	CAGCTG	1 cut(s)	388
RsaI	GTAC	5 cut(s)	327, 813, 2609, 2951, 3661
RsaNI	GTAC	5 cut(s)	326, 812, 2608, 2950, 3660
RseI	CAYNNNNRTG	4 cut(s)	721, 2051, 2888, 3044
SatI	GCNGC	8 cut(s)	142, 365, 1746, 1873, 1974, 2380, 3730, 3785
Sau3AI	GATC	9 cut(s)	466, 493, 634, 2326, 2360, 2743, 3076, 3520, 3612
Sau96I	GGNCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
ScaI	AGTACT	1 cut(s)	3661
SchI	GAGTC	5 cut(s)	1841, 2332, 2869, 3179, 3211
ScrFI	CCNGG	4 cut(s)	85, 464, 2154, 2358
SduI	GDGCHC	2 cut(s)	1378, 2109
SfaNI	GCATC	9 cut(s)	194, 233, 826, 2033, 2043, 2152, 2520, 2851, 3124
SfcI	CTRYAG	4 cut(s)	24, 1173, 2306, 2945
SfuI	TTCGAA	2 cut(s)	500, 598
SinI	GGWCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
SmiI	ATTTAAAT	1 cut(s)	1807
SmiMI	CAYNNNNRTG	4 cut(s)	721, 2051, 2888, 3044
SmlI	CTYRAG	2 cut(s)	2456, 2981
SmoI	CTYRAG	2 cut(s)	2456, 2981
SpeI	ACTAGT	1 cut(s)	2543
SphI	GCATGC	1 cut(s)	2215
SseBI	AGGCCT	1 cut(s)	88
SspI	AATATT	2 cut(s)	2990, 3691
SspMI	CTAG	7 cut(s)	285, 629, 1521, 1749, 2010, 2544, 3380
StuI	AGGCCT	1 cut(s)	88
StyD4I	CCNGG	4 cut(s)	83, 462, 2152, 2356
StyI	CCWWGG	6 cut(s)	719, 1071, 1155, 1503, 2889, 2995
SwaI	ATTTAAAT	1 cut(s)	1807
TaaI	ACNGT	9 cut(s)	106, 916, 2115, 2310, 2607, 2949, 2960, 3054, 3580
TaiI	ACGT	5 cut(s)	73, 605, 1801, 3091, 3723
TaqI	TCGA	8 cut(s)	101, 125, 500, 598, 798, 3079, 3120, 3456
TatI	WGTACW	4 cut(s)	325, 2607, 2949, 3659
TauI	GCSGC	2 cut(s)	144, 1976
TscAI	CASTG	8 cut(s)	154, 384, 462, 1117, 2621, 3018, 3585, 3777
TseFI	GTSAC	5 cut(s)	1108, 1553, 2423, 2813, 2923
TseI	GCWGC	6 cut(s)	364, 1745, 1872, 2379, 3729, 3784
Tsp45I	GTSAC	5 cut(s)	1108, 1553, 2423, 2813, 2923
TspGWI	ACGGA	3 cut(s)	143, 1190, 1374
TspRI	CASTG	8 cut(s)	154, 384, 462, 1117, 2621, 3018, 3585, 3777
Van91I	CCANNNNNTGG	3 cut(s)	437, 1242, 3547
Vha464I	CTTAAG	1 cut(s)	2456
VpaK11BI	GGWCC	6 cut(s)	157, 460, 1990, 3035, 3407, 3724
XapI	RAATTY	8 cut(s)	1049, 1346, 1364, 1467, 1600, 2247, 3100, 3441
XceI	RCATGY	8 cut(s)	1169, 1336, 2215, 2614, 3011, 3029, 3318, 3763
XmiI	GTMKAC	2 cut(s)	1125, 2305
XmnI	GAANNNNTTC	1 cut(s)	2732
XspI	CTAG	7 cut(s)	285, 629, 1521, 1749, 2010, 2544, 3380
ZraI	GACGTC	1 cut(s)	71
ZrmI	AGTACT	1 cut(s)	3661
Zsp2I	ATGCAT	4 cut(s)	758, 1814, 2048, 2058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.