Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009793.1

Orthogroup ID

OG0015588

Physical Location & Seq

Genomic Coordinates Reverse (-)

15655 .. 21192

Gene Structure 5538 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009793.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3762 bp

atggagctctattccgtcgagatggcgttggcggtagctgtgggatttgcgacaatgacacattggttggcttccatggttgaaaaccgtgagctagtgtctaatgataatcgagaattggccgacgtggacccccctgcatctcttctttcatcagctgaatcatcgtcagcttccatggttgaaaaccctgagccaatgccggaagaaaatcaagaattggtcccctctacatctcttgtatcatcagcagctccttggcagaagtatgatgtttttctgagtttcaggggtgcagacactcgtacgggttttgtatcccacttataccatgaattgcagactgtgagagggattcaaacgttcatggatgacaaaaagcttgaactaggggctcctatttctcgaagtctgctagaggcaattgaagaatcaaattttgcaattgttgttttgtcgaaagactatgctcaatctgcatggtgtttggaggaacttacaaagatttgtcaatgcatgaaaaccaataacagaatcctacccctgttttatcatgtcgaacctatggatgtgcggcatcaaaaggggacttttagagatgctttcacaaatcatgtgaaaaatgggtggcacagttcagagaagatgcagcagtggagaaaagctttaaaaacagtagccagtttctctgggtgtaatgcaaaggatcatcagaatgaaagagatcttgtcgaagccattgtggaatctgtgtgcagtaaagtacgacctattgaaattgagtttattatttccttcagagattttgtaccatttaaagcaaccagagaagccatggacaatgtactgaaggcgctaaaagatgaaaaggtcactgccgttggggtgtacggcatgggaggcattggaaaaacaaccatggtggaacatgttggtgtagaagcccaaaaaaaggggattttccgtcaggtgattatggctggcatatcccaaaagcctaacttgtggaatattcaagacacattagcagacatgttgggtgtgaagctggtggatgcgaccataactggaagagccaaaacactgaggaagaagataaggagtggaaataggatccttataattttggacaacatttggaatgaaatacagttgacagacataggaattcccagatccaacgagcttaaaagatgcaattccaaggtcctactcacaacaaggaaaagggatgtttgctatcgtatgcaatgccaagcaagcattcgtctcaataccttaactgaacaagattcttggaagttgtttgagaaggaagcaagaaattcttttgaaacgtcgactttccataacaaagcaaggcaggtagcaggagaatgtggtggtcttccagttgcattgaaagcagttgcaaaggcacttggggataaaaagttggacgaatggaacaaagctgctgagcgactaaaggtgtctcaacttccccaccctgaagatgagaaagttgtgttcgaatgcattaagttaagctatgattacttgaaatctgatgtttccaaatcatgctttttgctttgctgcctattcccggaggatgatgatatcaaaattgaagacttgctgaagtatgggattgggaaaggattgtttgaagagtccaacatgcaaaatgccagagacacaatacagaccgttgtcgagtctcttaaagattcgggcttgcttttggatgctaaaaaagaagggggatatgtaaggatgcatgatgtcgtcagagatgttgccatacaaatttccttacaattttttgtaagagctggttgtgaattgcagtattggccaaggattgatgcaggtaaaggctacattgcaatctcactaatgaagaacaaaatatgcacgcttcctgctgaacacttggtatttccagaacttcgtattctcttgttacgaagtaatattatgaataacatcccagttccttcatttgaacgtctagaggcattaagggtcttagatcttagctacactggcatttctttactacccacatcattcaatctcctaaccagcctccacactttgtatctagattgttgctgcttatcaaggataagtaacatatccctacttggacagttgaaagagcttgagattcttagtatgagagaacttcctcttttgaaattgccgaaagaaataggacagttgaccagactaaggatgctagacttcactagtgtctgtgttgatatagttccttctaaagtgataagcaacctcaataaattagaggaactgtacatacagtgttattttgcggactgggggagtaaagtcaaggggagtaaagcagaggggaatgaagtcaagggagatacagttgaggagagcgaagctgagggagtaagagaggaaactaatgcttcctttgatgagttaactagcttgttacatctacacattttgaaggttttcatatctgatccaaaatgcttacctacagatgttgaggtcaagtctaattggaaaagttttgacatatgtatctgtagagaccggtcaattagagaattgcttttggatccaagatctccacttagagaattgcttttgaattcaagttctccacttgattcaaaagccttgactcttgacacaaccatggataccttaccgcaatggtttactgatgtggtgaacaagaaaacggagaagctacagtacataaactgtcagggtttagttaatgttcttaatgaatattaccaagggacattacatgcacttaagtatttacatgttattggtcccagtgataaattggaacagttgatgaccccaataacatcggttccaaatgaacctgtgtttgagaatttggaagagttgcatcttgttgaagtgatttgtctgaaggagttatgtgttggtgaattaccaaatgagtctctatgcaagcttaggttactgaaggtgagaggttgtcatgaattgatgaatgcacttttacaatctaatttgctgaagagactaaaaaatttggaaaaactaagttgtgaagagatggataaattggagtatgtattttcatctgaagggtctgaggtagaacaaaatactctgacagagttgatagagatgagattggagaatctagggagcctaataaagatatggaatggtcctgctcctagtgaaatcttttgtcatgttaaaactttggtagttttcgagtgcaataagctgaaaaatcttttcacatctgacatagctcaccatcttcatgacttggaagatctttcagtagaggcttgcctacggttggagagagttattgaagcaagtgaggaaacagtgaacgacaagatagttttaccaaaattgaagaagttagctatgaaaaagcttcttaagcttacaaggttctatggtagtactggaagtgctactagtgatgaagaatatgttgagtttcctttattggaacactcgcatgtggaacgctgccatattttcaattctccagctaaggacatgttggtttcgatgatgaataagcagcctgttttgattcctatgcaagagacagaactaccaaatctggaaaagctagtttgtgagaaaatgggtgacatcggaacacttttcaatggtgatgaacaagcggaagaaggtttcgattctttcgaagatacaggtcagagagaggcacctactttaaccggatcatcattccagaactttgttgactcttggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC TIR

Protein Analysis

1253

Amino Acids

141.76

Weight (kDa)

5.47

Isoelectric Point (pI)

39.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015588)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g44030 FvH4_3g44030
rosa_chinensis	RchiOBHm_Chr5g0079591 RchiOBHm_Chr5g0080151 RchiOBHm_Chr5g0080161 RchiOBHm_Chr5g0080261 RchiOBHm_Chr5g0080311
rosa_multiflora	Rmu_sc0001803.1_g000037 Rmu_sc0002513.1_g000013 Rmu_sc0007806.1_g000017 Rmu_sc0009793.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003050
rosa_rugosa	Rorug05G0468000
rosa_wichuraiana	Rw0G023400 Rw5G048450 Rw5G048480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1121
Acc36I	ACCTGC	2 cut(s)	1354, 1844
AccB1I	GGYRCC	1 cut(s)	3712
AccI	GTMKAC	1 cut(s)	1340
AciI	CCGC	5 cut(s)	32, 574, 2321, 2678, 3668
AclI	AACGTT	1 cut(s)	362
AclWI	GGATC	8 cut(s)	714, 1108, 1121, 1170, 2480, 2579, 2592, 3736
AcoI	YGGCCR	2 cut(s)	120, 1838
AcsI	RAATTY	7 cut(s)	436, 1167, 1324, 1791, 2617, 2878, 3040
AcuI	CTGAAG	8 cut(s)	781, 869, 1512, 1643, 2936, 2993, 3047, 3117
AfaI	GTAC	8 cut(s)	307, 765, 810, 846, 890, 2303, 2726, 3439
AfiI	CCNNNNNNNGG	4 cut(s)	952, 1588, 2220, 3325
AflII	CTTAAG	2 cut(s)	2789, 3413
AflIII	ACRYGT	4 cut(s)	928, 1032, 2800, 3537
AgeI	ACCGGT	1 cut(s)	2559
AhlI	ACTAGT	2 cut(s)	2237, 3452
AjiI	CACGTC	1 cut(s)	127
AjuI	GAANNNNNNNTTGG	2 cut(s)	1248, 1280
Alw21I	GWGCWC	1 cut(s)	9
Alw26I	GTCTC	8 cut(s)	1274, 1479, 1671, 1707, 2550, 2955, 3025, 3581
AlwI	GGATC	8 cut(s)	714, 1108, 1121, 1170, 2480, 2579, 2592, 3736
AoxI	GGCC	2 cut(s)	120, 1838
ApeKI	GCWGC	7 cut(s)	251, 649, 1454, 1578, 2100, 3507, 3562
ApoI	RAATTY	7 cut(s)	436, 1167, 1324, 1791, 2617, 2878, 3040
AsiGI	ACCGGT	1 cut(s)	2559
Asp700I	GAANNNNTTC	1 cut(s)	2474
AspLEI	GCGC	1 cut(s)	856
AspS9I	GGNCC	5 cut(s)	130, 223, 1207, 2810, 3185
AsuC2I	CCSGG	1 cut(s)	1589
AsuHPI	GGTGA	7 cut(s)	982, 2710, 2945, 2989, 3269, 3644, 3668
AsuII	TTCGAA	2 cut(s)	1512, 3690
AvaII	GGWCC	5 cut(s)	130, 223, 1207, 2810, 3185
BaeI	ACNNNNGTAYC	2 cut(s)	2530, 2563
BalI	TGGCCA	1 cut(s)	1840
BamHI	GGATCC	2 cut(s)	1113, 2584
BanI	GGYRCC	1 cut(s)	3712
BanII	GRGCYC	2 cut(s)	9, 397
BarI	GAAGNNNNNNTAC	2 cut(s)	2708, 2740
BbsI	GAAGAC	2 cut(s)	1379, 1620
Bbv12I	GWGCWC	1 cut(s)	9
BbvCI	CCTCAGC	1 cut(s)	2400
BbvI	GCAGC	7 cut(s)	263, 661, 1441, 1565, 2087, 3494, 3574
BccI	CCATC	3 cut(s)	16, 3061, 3288
BceAI	ACGGC	2 cut(s)	863, 907
BciVI	GTATCC	2 cut(s)	328, 2662
BcnI	CCSGG	1 cut(s)	1589
BcoDI	GTCTC	8 cut(s)	1274, 1479, 1671, 1707, 2550, 2955, 3025, 3581
BcuI	ACTAGT	2 cut(s)	2237, 3452
BfmI	CTRYAG	3 cut(s)	2502, 2551, 2720
BfoI	RGCGCY	1 cut(s)	857
BfrI	CTTAAG	2 cut(s)	2789, 3413
BfuAI	ACCTGC	2 cut(s)	1354, 1844
BfuI	GTATCC	2 cut(s)	328, 2662
BglII	AGATCT	4 cut(s)	724, 2017, 2591, 3298
BisI	GCNGC	8 cut(s)	252, 575, 650, 1455, 1579, 2101, 3508, 3563
BlpI	GCTNAGC	1 cut(s)	1458
BlsI	GCNGC	8 cut(s)	253, 576, 651, 1456, 1580, 2102, 3509, 3564
BmcAI	AGTACT	1 cut(s)	3439
Bme1390I	CCNGG	1 cut(s)	1589
Bme18I	GGWCC	5 cut(s)	130, 223, 1207, 2810, 3185
BmgBI	CACGTC	1 cut(s)	127
BmgT120I	GGNCC	5 cut(s)	130, 223, 1207, 2810, 3185
BmiI	GGNNCC	9 cut(s)	132, 225, 396, 1115, 2586, 2812, 2856, 3164, 3714
BmrFI	CCNGG	1 cut(s)	1589
BmrI	ACTGGG	3 cut(s)	1970, 2335, 2808
BmuI	ACTGGG	3 cut(s)	1970, 2335, 2808
BoxI	GACNNNNGTC	1 cut(s)	1694
BpiI	GAAGAC	2 cut(s)	1379, 1620
BpmI	CTGGAG	1 cut(s)	3510
Bpu10I	CCTNAGC	4 cut(s)	192, 2400, 2963, 3531
Bpu1102I	GCTNAGC	1 cut(s)	1458
Bpu14I	TTCGAA	2 cut(s)	1512, 3690
BpuEI	CTTGAG	1 cut(s)	2171
BpuMI	CCSGG	1 cut(s)	1589
BsaI	GGTCTC	1 cut(s)	2550
BsaJI	CCNNGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
BsaWI	WCCGGW	2 cut(s)	2559, 3725
BsaXI	ACNNNNNCTCC	2 cut(s)	2367, 2397
Bsc4I	CCNNNNNNNGG	4 cut(s)	952, 1588, 2220, 3325
Bse118I	RCCGGY	1 cut(s)	2559
Bse1I	ACTGG	8 cut(s)	681, 1072, 1391, 1976, 2035, 2330, 2814, 3445
Bse3DI	GCAATG	3 cut(s)	1256, 1866, 2687
BseDI	CCNNGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
BseGI	GGATG	9 cut(s)	376, 574, 1060, 1237, 1600, 1735, 1764, 1971, 2229
BseLI	CCNNNNNNNGG	4 cut(s)	952, 1588, 2220, 3325
BseMI	GCAATG	3 cut(s)	1256, 1866, 2687
BseMII	CTCAG	6 cut(s)	183, 272, 1076, 1449, 2391, 3096
BseNI	ACTGG	8 cut(s)	681, 1072, 1391, 1976, 2035, 2330, 2814, 3445
BseRI	GAGGAG	1 cut(s)	2402
BseXI	GCAGC	7 cut(s)	263, 661, 1441, 1565, 2087, 3494, 3574
BsgI	GTGCAG	2 cut(s)	315, 775
BshFI	GGCC	2 cut(s)	122, 1840
BshNI	GGYRCC	1 cut(s)	3712
BshTI	ACCGGT	1 cut(s)	2559
BsiHKAI	GWGCWC	1 cut(s)	9
BsiSI	CCGG	4 cut(s)	203, 1589, 2560, 3726
BsiWI	CGTACG	1 cut(s)	305
BslFI	GGGAC	4 cut(s)	209, 601, 2788, 2796
BslI	CCNNNNNNNGG	4 cut(s)	952, 1588, 2220, 3325
BsmAI	GTCTC	8 cut(s)	1274, 1479, 1671, 1707, 2550, 2955, 3025, 3581
BsmBI	CGTCTC	1 cut(s)	1274
BsmFI	GGGAC	4 cut(s)	209, 601, 2788, 2796
BsmI	GAATGC	3 cut(s)	1263, 1520, 3007
BsnI	GGCC	2 cut(s)	122, 1840
Bso31I	GGTCTC	1 cut(s)	2550
Bsp119I	TTCGAA	2 cut(s)	1512, 3690
Bsp1286I	GDGCHC	2 cut(s)	9, 397
Bsp1407I	TGTACA	1 cut(s)	2301
Bsp1720I	GCTNAGC	1 cut(s)	1458
Bsp19I	CCATGG	5 cut(s)	75, 177, 834, 918, 2664
BspACI	CCGC	5 cut(s)	32, 574, 2321, 2678, 3668
BspANI	GGCC	2 cut(s)	122, 1840
BspCNI	CTCAG	6 cut(s)	184, 273, 1077, 1450, 2392, 3097
BspHI	TCATGA	2 cut(s)	2989, 3286
BspLI	GGNNCC	9 cut(s)	132, 225, 396, 1115, 2586, 2812, 2856, 3164, 3714
BspMI	ACCTGC	2 cut(s)	1354, 1844
BspPI	GGATC	8 cut(s)	714, 1108, 1121, 1170, 2480, 2579, 2592, 3736
BspQI	GCTCTTC	1 cut(s)	1066
BspT104I	TTCGAA	2 cut(s)	1512, 3690
BspT107I	GGYRCC	1 cut(s)	3712
BspTI	CTTAAG	2 cut(s)	2789, 3413
BspTNI	GGTCTC	1 cut(s)	2550
BsrDI	GCAATG	3 cut(s)	1256, 1866, 2687
BsrFI	RCCGGY	1 cut(s)	2559
BsrGI	TGTACA	1 cut(s)	2301
BsrI	ACTGG	8 cut(s)	681, 1072, 1391, 1976, 2035, 2330, 2814, 3445
BssAI	RCCGGY	1 cut(s)	2559
BssECI	CCNNGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
BssT1I	CCWWGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
Bst6I	CTCTTC	6 cut(s)	150, 1066, 1647, 2880, 3023, 3057
BstAFI	CTTAAG	2 cut(s)	2789, 3413
BstAUI	TGTACA	1 cut(s)	2301
BstBI	TTCGAA	2 cut(s)	1512, 3690
BstC8I	GCNNGC	6 cut(s)	982, 1261, 1721, 1901, 2960, 3316
BstDSI	CCRYGG	5 cut(s)	75, 177, 834, 918, 2664
BstF5I	GGATG	9 cut(s)	376, 574, 1060, 1237, 1600, 1735, 1764, 1971, 2229
BstH2I	RGCGCY	1 cut(s)	857
BstHHI	GCGC	1 cut(s)	856
BstMAI	GTCTC	8 cut(s)	1274, 1479, 1671, 1707, 2550, 2955, 3025, 3581
BstMWI	GCNNNNNNNGC	7 cut(s)	476, 900, 1260, 1403, 1837, 2031, 3415
BstNSI	RCATGY	7 cut(s)	932, 1036, 1666, 2786, 2804, 3500, 3541
BstPAI	GACNNNNGTC	1 cut(s)	1694
BstSCI	CCNGG	1 cut(s)	1587
BstSFI	CTRYAG	3 cut(s)	2502, 2551, 2720
BstV1I	GCAGC	7 cut(s)	263, 661, 1441, 1565, 2087, 3494, 3574
BstV2I	GAAGAC	2 cut(s)	1379, 1620
BstX2I	RGATCY	7 cut(s)	724, 1113, 1175, 2017, 2584, 2591, 3298
BstYI	RGATCY	7 cut(s)	724, 1113, 1175, 2017, 2584, 2591, 3298
BsuI	GTATCC	2 cut(s)	328, 2662
BsuRI	GGCC	2 cut(s)	122, 1840
BtgI	CCRYGG	5 cut(s)	75, 177, 834, 918, 2664
BtrI	CACGTC	1 cut(s)	127
BtsCI	GGATG	9 cut(s)	376, 574, 1060, 1237, 1600, 1735, 1764, 1971, 2229
BtsI	GCAGTG	2 cut(s)	659, 873
BtsIMutI	CAGTG	7 cut(s)	659, 873, 1082, 2028, 2315, 2821, 3363
BveI	ACCTGC	2 cut(s)	1354, 1844
Cac8I	GCNNGC	6 cut(s)	982, 1261, 1721, 1901, 2960, 3316
CciI	TCATGA	2 cut(s)	2989, 3286
CfoI	GCGC	1 cut(s)	856
Cfr10I	RCCGGY	1 cut(s)	2559
Cfr13I	GGNCC	5 cut(s)	130, 223, 1207, 2810, 3185
Csp6I	GTAC	8 cut(s)	306, 764, 809, 845, 889, 2302, 2725, 3438
CspAI	ACCGGT	1 cut(s)	2559
CspCI	CAANNNNNGTGG	2 cut(s)	903, 938
CviQI	GTAC	8 cut(s)	306, 764, 809, 845, 889, 2302, 2725, 3438
DraI	TTTAAA	2 cut(s)	669, 817
EaeI	YGGCCR	2 cut(s)	120, 1838
Eam1104I	CTCTTC	6 cut(s)	150, 1066, 1647, 2880, 3023, 3057
EarI	CTCTTC	6 cut(s)	150, 1066, 1647, 2880, 3023, 3057
Ecl136II	GAGCTC	1 cut(s)	7
Eco130I	CCWWGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
Eco24I	GRGCYC	2 cut(s)	9, 397
Eco31I	GGTCTC	1 cut(s)	2550
Eco32I	GATATC	1 cut(s)	1603
Eco47I	GGWCC	5 cut(s)	130, 223, 1207, 2810, 3185
Eco53kI	GAGCTC	1 cut(s)	7
Eco57I	CTGAAG	8 cut(s)	781, 869, 1512, 1643, 2936, 2993, 3047, 3117
EcoICRI	GAGCTC	1 cut(s)	7
EcoO109I	RGGNCCY	1 cut(s)	1207
EcoRI	GAATTC	2 cut(s)	1167, 2617
EcoRV	GATATC	1 cut(s)	1603
EcoT14I	CCWWGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
EcoT22I	ATGCAT	3 cut(s)	518, 1520, 1764
EcoT38I	GRGCYC	2 cut(s)	9, 397
ErhI	CCWWGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
Esp3I	CGTCTC	1 cut(s)	1274
FalI	AAGNNNNNCTT	4 cut(s)	986, 1018, 1312, 1344
FaqI	GGGAC	4 cut(s)	209, 601, 2788, 2796
FauNDI	CATATG	1 cut(s)	2543
FblI	GTMKAC	1 cut(s)	1340
Fnu4HI	GCNGC	8 cut(s)	252, 575, 650, 1455, 1579, 2101, 3508, 3563
FokI	GGATG	9 cut(s)	383, 581, 1067, 1244, 1607, 1742, 1771, 1958, 2236
FriOI	GRGCYC	2 cut(s)	9, 397
Fsp4HI	GCNGC	8 cut(s)	252, 575, 650, 1455, 1579, 2101, 3508, 3563
GlaI	GCGC	1 cut(s)	855
GluI	GCNGC	8 cut(s)	252, 575, 650, 1455, 1579, 2101, 3508, 3563
GsuI	CTGGAG	1 cut(s)	3510
HaeII	RGCGCY	1 cut(s)	857
HaeIII	GGCC	2 cut(s)	122, 1840
HapII	CCGG	4 cut(s)	203, 1589, 2560, 3726
HhaI	GCGC	1 cut(s)	856
Hin6I	GCGC	1 cut(s)	854
HinP1I	GCGC	1 cut(s)	854
HincII	GTYRAC	5 cut(s)	1155, 1341, 2211, 2442, 3751
HindII	GTYRAC	5 cut(s)	1155, 1341, 2211, 2442, 3751
HindIII	AAGCTT	5 cut(s)	380, 663, 2960, 3407, 3416
HpaI	GTTAAC	1 cut(s)	2442
HpaII	CCGG	4 cut(s)	203, 1589, 2560, 3726
HphI	GGTGA	7 cut(s)	982, 2710, 2945, 2989, 3269, 3644, 3668
Hpy99I	CGWCG	3 cut(s)	20, 128, 1342
HpyCH4IV	ACGT	4 cut(s)	126, 362, 1337, 1993
HpyF10VI	GCNNNNNNNGC	7 cut(s)	476, 900, 1260, 1403, 1837, 2031, 3415
HpySE526I	ACGT	4 cut(s)	126, 362, 1337, 1993
HspAI	GCGC	1 cut(s)	854
KspAI	GTTAAC	1 cut(s)	2442
LguI	GCTCTTC	1 cut(s)	1066
LmnI	GCTCC	5 cut(s)	4, 259, 400, 3162, 3196
Lsp1109I	GCAGC	7 cut(s)	263, 661, 1441, 1565, 2087, 3494, 3574
MaeII	ACGT	4 cut(s)	126, 362, 1337, 1993
MaeIII	GTNAC	6 cut(s)	871, 1947, 2117, 2451, 2967, 3632
MfeI	CAATTG	2 cut(s)	423, 444
MflI	RGATCY	7 cut(s)	724, 1113, 1175, 2017, 2584, 2591, 3298
MhlI	GDGCHC	2 cut(s)	9, 397
MlsI	TGGCCA	1 cut(s)	1840
MluNI	TGGCCA	1 cut(s)	1840
MlyI	GAGTC	5 cut(s)	1664, 1709, 2644, 2957, 3746
MmeI	TCCRAC	4 cut(s)	1203, 1416, 1683, 3306
Mox20I	TGGCCA	1 cut(s)	1840
Mph1103I	ATGCAT	3 cut(s)	518, 1520, 1764
MroXI	GAANNNNTTC	1 cut(s)	2474
MscI	TGGCCA	1 cut(s)	1840
MslI	CAYNNNNRTG	5 cut(s)	714, 933, 2663, 3285, 3495
Msp20I	TGGCCA	1 cut(s)	1840
MspA1I	CMGCKG	1 cut(s)	158
MspCI	CTTAAG	2 cut(s)	2789, 3413
MspI	CCGG	4 cut(s)	203, 1589, 2560, 3726
MspR9I	CCNGG	1 cut(s)	1589
MunI	CAATTG	2 cut(s)	423, 444
Mva1269I	GAATGC	3 cut(s)	1263, 1520, 3007
MwoI	GCNNNNNNNGC	7 cut(s)	476, 900, 1260, 1403, 1837, 2031, 3415
NciI	CCSGG	1 cut(s)	1589
NcoI	CCATGG	5 cut(s)	75, 177, 834, 918, 2664
NdeI	CATATG	1 cut(s)	2543
NlaIV	GGNNCC	9 cut(s)	132, 225, 396, 1115, 2586, 2812, 2856, 3164, 3714
NmuCI	GTSAC	2 cut(s)	871, 3632
NsiI	ATGCAT	3 cut(s)	518, 1520, 1764
NspI	RCATGY	7 cut(s)	932, 1036, 1666, 2786, 2804, 3500, 3541
NspV	TTCGAA	2 cut(s)	1512, 3690
PagI	TCATGA	2 cut(s)	2989, 3286
PciI	ACATGT	4 cut(s)	928, 1032, 2800, 3537
PciSI	GCTCTTC	1 cut(s)	1066
PcsI	WCGNNNNNNNCGW	1 cut(s)	3687
PctI	GAATGC	3 cut(s)	1263, 1520, 3007
PdmI	GAANNNNTTC	1 cut(s)	2474
Pfl23II	CGTACG	1 cut(s)	305
PfoI	TCCNGGA	1 cut(s)	1587
PinAI	ACCGGT	1 cut(s)	2559
PkrI	GCNGC	8 cut(s)	253, 576, 651, 1456, 1580, 2102, 3509, 3564
PleI	GAGTC	5 cut(s)	1663, 1708, 2644, 2956, 3746
PpsI	GAGTC	5 cut(s)	1663, 1708, 2644, 2956, 3746
PpuMI	RGGWCCY	1 cut(s)	1207
PscI	ACATGT	4 cut(s)	928, 1032, 2800, 3537
PshAI	GACNNNNGTC	1 cut(s)	1694
PsiI	TTATAA	1 cut(s)	1121
Psp124BI	GAGCTC	1 cut(s)	9
Psp1406I	AACGTT	1 cut(s)	362
Psp5II	RGGWCCY	1 cut(s)	1207
PspLI	CGTACG	1 cut(s)	305
PspN4I	GGNNCC	9 cut(s)	132, 225, 396, 1115, 2586, 2812, 2856, 3164, 3714
PspPI	GGNCC	5 cut(s)	130, 223, 1207, 2810, 3185
PspPPI	RGGWCCY	1 cut(s)	1207
PsrI	GAACNNNNNNTAC	2 cut(s)	2289, 2321
PsuI	RGATCY	7 cut(s)	724, 1113, 1175, 2017, 2584, 2591, 3298
PvuII	CAGCTG	1 cut(s)	158
RsaI	GTAC	8 cut(s)	307, 765, 810, 846, 890, 2303, 2726, 3439
RsaNI	GTAC	8 cut(s)	306, 764, 809, 845, 889, 2302, 2725, 3438
RseI	CAYNNNNRTG	5 cut(s)	714, 933, 2663, 3285, 3495
SacI	GAGCTC	1 cut(s)	9
SalI	GTCGAC	1 cut(s)	1339
SapI	GCTCTTC	1 cut(s)	1066
SatI	GCNGC	8 cut(s)	252, 575, 650, 1455, 1579, 2101, 3508, 3563
Sau96I	GGNCC	5 cut(s)	130, 223, 1207, 2810, 3185
ScaI	AGTACT	1 cut(s)	3439
SchI	GAGTC	5 cut(s)	1664, 1709, 2644, 2957, 3746
ScrFI	CCNGG	1 cut(s)	1589
SduI	GDGCHC	2 cut(s)	9, 397
SfcI	CTRYAG	3 cut(s)	2502, 2551, 2720
SfuI	TTCGAA	2 cut(s)	1512, 3690
SinI	GGWCC	5 cut(s)	130, 223, 1207, 2810, 3185
SmiMI	CAYNNNNRTG	5 cut(s)	714, 933, 2663, 3285, 3495
SmlI	CTYRAG	3 cut(s)	2150, 2789, 3413
SmoI	CTYRAG	3 cut(s)	2150, 2789, 3413
SpeI	ACTAGT	2 cut(s)	2237, 3452
SsiI	CCGC	5 cut(s)	32, 574, 2321, 2678, 3668
SspI	AATATT	3 cut(s)	1012, 1960, 2765
SstI	GAGCTC	1 cut(s)	9
StyD4I	CCNGG	1 cut(s)	1587
StyI	CCWWGG	9 cut(s)	75, 177, 257, 834, 918, 1203, 1841, 2664, 2770
TaiI	ACGT	4 cut(s)	129, 365, 1340, 1996
TatI	WGTACW	4 cut(s)	844, 2301, 2724, 3437
TauI	GCSGC	1 cut(s)	577
TscAI	CASTG	7 cut(s)	659, 880, 1089, 2035, 2315, 2821, 3363
TseFI	GTSAC	2 cut(s)	871, 3632
TseI	GCWGC	7 cut(s)	251, 649, 1454, 1578, 2100, 3507, 3562
Tsp45I	GTSAC	2 cut(s)	871, 3632
TspGWI	ACGGA	3 cut(s)	4, 953, 2726
TspRI	CASTG	7 cut(s)	659, 880, 1089, 2035, 2315, 2821, 3363
Vha464I	CTTAAG	2 cut(s)	2789, 3413
VpaK11BI	GGWCC	5 cut(s)	130, 223, 1207, 2810, 3185
XapI	RAATTY	7 cut(s)	436, 1167, 1324, 1791, 2617, 2878, 3040
XbaI	TCTAGA	2 cut(s)	1996, 2089
XceI	RCATGY	7 cut(s)	932, 1036, 1666, 2786, 2804, 3500, 3541
XcmI	CCANNNNNNNNNTGG	2 cut(s)	832, 2821
XmiI	GTMKAC	1 cut(s)	1340
XmnI	GAANNNNTTC	1 cut(s)	2474
ZrmI	AGTACT	1 cut(s)	3439
Zsp2I	ATGCAT	3 cut(s)	518, 1520, 1764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.