Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002513.1

Orthogroup ID

OG0015588

Physical Location & Seq

Genomic Coordinates Reverse (-)

61124 .. 65083

Gene Structure 3960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002513.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3561 bp

atggagctctattccgtcgagatggcgttggcgatagctgtgggatttgcgacaatgacacattggttggcttccatggttgaaaaccgtgagccagtgtctaatggtaatcgagaattggccgacgtggactcccctgcatctcttctttcatcagctgaatcatcgtcagcttccatggttgaaaaccctgagccagtaccggaggaaaatcaagaattggtcccctctacatctcttgtatcatcagcagctccttggcagaagtatgatgtttttctgagtttcaggggtgcagacactcgtaagggttttgtatcccacttacaccatgaattgcagactgtgagagggatccaaacattcaaggatgacaaagatcttgaaacaggggcccctatttcttcaagtctgctaaaggcaattgaagaatcaaattttgcaattgttgttctgtcggaaaactatgctcagtctgcatggtgtttggaggaacttacaaagatttgtcaatgcatgaaagacaagaacagaatcctacccctgttttattatgtccaaccaagtgatgtgcggcatcaaaatgggacttttggagatgctttaactaagcatggaaactcgggccggcacaattcagagaaggtgcagcggtggagggatgctttacacagagtggccggtttctgtgggcgtaatgcacaagattttcagactgaaagagatcttgtcgaagccattgtggatactgtgggcagtaaagtacgacctattgaaactgagtttattatttcctcgatccattttgaaccatttgaagcaacgagagaagccatggataaagtaatggaggcgctaaaagatgaaaacatcactatcattggggtttacggaattggaggtgttggaaagtcaacaatggtggaacatgttggtttagaagcccaaaaaaaaaggcttttccctcaggtgattttggctcgcatatccccagaacctaacgtgtggaatattcaaggcacattagcagacatgttgggtctgaaactggtggatgagacagtaattggaagagcccgtacattgaggaagaagataacaagtggagataggatccttataatcttggacaacatttgggagggaatagagttgacaagcataggaattcccagattcaacgagcttaaaagatgcaattccaaggtcctactgacaacaaggaaaagggatgtttgctatcgtatgcaatgccaagcaagcattcgtctcaataccttaactgaacaagattcttggaagttgtttgcaaaggaagcaagaaattcttttaaaacgtcgactttctataacaaagcaaggcaggtatcaggagaatgtggtggtcttccagttgcgttgaaagcagttgcaaaggcacttggggataaagagttggacgaatggaacaaagccgctgagcgactaaaggtgtctcaacctccccaccctgaagacgagaaagttgtgttcgaatgcattaagttaagctatgattacttgaaatctgatgtttccaagtcatgcttcttgctttgctgcctattcccggaggattatgatatcaaaattgaagacttgctgaagtatgggattgggaaaggattgtttgaagagtccaacatgcaaaatgccagagacacaatacatacaatcatcgagtctcttaaagattccagcttgcttttggatgctaaagggattaaggggtgcgtaaggatgcatgatgtcatcagagatgttgccatacaaatttccttacaattttttgtaagagctggttgtgaattgcagtattggccaaggattgatgcaggtaaaggctacattgcgatctcactaatgaagaacaaaatatgcacgcttcccgctgaacacttggtatttccaaaacttcatattcttttgttacaaagtaatattatgaataacatcccagtttcttcatttcaacgtctaaaggcattaagggtcttagatcttagctacactgccatttctttactacccacatcattcaatctcctaaccagcctccacactttgtatctagatggttgcttgtcaaggataagtaacatatccctacttggacagttgaaaaaacttgagattcttagtatgagagaacttcctcttttgaaattgcctaaagaaataggacagttgaccacactaaggatgctggacttcactagtgtctgtgttgatatagttccttctaaagtgataagcaacctcaataaattagaggaactgtacatacagtgcgattttgcggactgggggagtaaagcagagggaagtgaagtcgagggaaatacagttgaggagagcgaagctgagggagcaagagaggaaactaatgctccctttgatgagttcactagcttgttacatctacagattttgaaggttttcatatctgatccaaaatgcttacctacagatgttgaggtaaagtctaattggaaaagttttgacatatgtatctgtagagacccatcaattagagaatcgcttttggatccaagttctccacttgattcaaaagccgattcaaaagccttgactcttgacacaaccatggataccttaccaaaatggtttactgatgtggtaaccaagaaatcagagaagctacagtatagaaactgtcggggtttagttaatgttcttaaggaatattaccaagggaccttacattcactgaagtatttacatgttattggtcccagtgacaaattggaacagttgatgaccacaataacaccgattccaaatgaacctgtgtttgagaatttggaagagttgcatctcgatggagtgaattgtctgaaggagttatgtgttggtgaattaccaaatcagtctctatgcaagcttaggttactggaggtgagaggttgtcctgaattgatggatgcacttttacaatctaatttgttgaagagactaccaaatttggaaaaactaagttgtgaagagatggataaattggagtatgtgttttcatatgaagggtctgaggtagaacaaagtactctgacagagttgatagagatgagattggagaatctagggaacctaataaagatatggaatggtcctgctccttgtgaaatcttttgtcatgttaaaactttggtagttttcgagtgcaataagctgaaaaatctctttacatctgacatagctcaccatcttcatgacttggaagatctttcagtagaggcttgcctagggttggagagagttattgaagcaagtgaggaaacagtgaacgacaagatagttttaccaaaattgaagaagttagctttgaaaaagcttcttaagcttacaaggttctatggtagtactggaagtgctactaatgatgaagaatgtattgagtttcctttattggaacactcgcatgtggaacgctgccatattttcaattctccagctaaggacatgttggtttcaatgatgaataagcagcctgttttgattcctatgcaaggtttgtccctatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC TIR

Protein Analysis

1186

Amino Acids

133.52

Weight (kDa)

5.55

Isoelectric Point (pI)

41.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015588)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g44030 FvH4_3g44030
rosa_chinensis	RchiOBHm_Chr5g0079591 RchiOBHm_Chr5g0080151 RchiOBHm_Chr5g0080161 RchiOBHm_Chr5g0080261 RchiOBHm_Chr5g0080311
rosa_multiflora	Rmu_sc0001803.1_g000037 Rmu_sc0002513.1_g000013 Rmu_sc0007806.1_g000017 Rmu_sc0009793.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003050
rosa_rugosa	Rorug05G0468000
rosa_wichuraiana	Rw0G023400 Rw5G048450 Rw5G048480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1121
Acc36I	ACCTGC	2 cut(s)	1354, 1844
AccI	GTMKAC	1 cut(s)	1340
AciI	CCGC	5 cut(s)	574, 652, 1455, 1908, 2318
AclWI	GGATC	8 cut(s)	349, 362, 793, 1108, 1121, 2462, 2561, 2574
AcoI	YGGCCR	3 cut(s)	120, 678, 1838
AcsI	RAATTY	6 cut(s)	436, 1167, 1324, 1791, 2839, 3001
AcuI	CTGAAG	4 cut(s)	1512, 1643, 2771, 2897
AdeI	CACNNNGTG	1 cut(s)	676
AfaI	GTAC	6 cut(s)	201, 765, 1081, 2300, 3082, 3400
AfiI	CCNNNNNNNGG	4 cut(s)	1588, 2217, 3286, 3545
AflII	CTTAAG	2 cut(s)	2717, 3374
AflIII	ACRYGT	5 cut(s)	928, 1002, 1032, 2761, 3498
AhlI	ACTAGT	1 cut(s)	2234
AjiI	CACGTC	1 cut(s)	127
AjuI	GAANNNNNNNTTGG	4 cut(s)	1248, 1280, 1550, 1582
Alw21I	GWGCWC	1 cut(s)	9
Alw26I	GTCTC	8 cut(s)	1052, 1274, 1479, 1671, 1707, 2532, 2916, 2986
AlwI	GGATC	8 cut(s)	349, 362, 793, 1108, 1121, 2462, 2561, 2574
Ama87I	CYCGRG	1 cut(s)	622
AoxI	GGCC	5 cut(s)	120, 393, 625, 678, 1838
ApaI	GGGCCC	1 cut(s)	397
ApeKI	GCWGC	5 cut(s)	251, 649, 1578, 3468, 3523
ApoI	RAATTY	6 cut(s)	436, 1167, 1324, 1791, 2839, 3001
Asp700I	GAANNNNTTC	1 cut(s)	2456
AspA2I	CCTAGG	1 cut(s)	3280
AspLEI	GCGC	1 cut(s)	856
AspS9I	GGNCC	8 cut(s)	223, 393, 394, 625, 1207, 2736, 2771, 3146
AsuC2I	CCSGG	1 cut(s)	1589
AsuHPI	GGTGA	4 cut(s)	982, 2906, 2950, 3230
AsuII	TTCGAA	1 cut(s)	1512
AvaI	CYCGRG	1 cut(s)	622
AvaII	GGWCC	5 cut(s)	223, 1207, 2736, 2771, 3146
AvrII	CCTAGG	1 cut(s)	3280
AxyI	CCTNAGG	1 cut(s)	966
BaeGI	GKGCMC	1 cut(s)	397
BaeI	ACNNNNGTAYC	2 cut(s)	2512, 2545
BalI	TGGCCA	1 cut(s)	1840
BamHI	GGATCC	3 cut(s)	354, 1113, 2566
BanII	GRGCYC	3 cut(s)	9, 397, 1078
BarI	GAAGNNNNNNTAC	2 cut(s)	1063, 1095
BbsI	GAAGAC	3 cut(s)	1379, 1500, 1620
Bbv12I	GWGCWC	1 cut(s)	9
BbvCI	CCTCAGC	1 cut(s)	2382
BbvI	GCAGC	5 cut(s)	263, 661, 1565, 3455, 3535
BccI	CCATC	7 cut(s)	16, 2087, 2551, 2855, 2953, 3022, 3249
BciVI	GTATCC	3 cut(s)	328, 739, 2623
BcnI	CCSGG	1 cut(s)	1589
BcoDI	GTCTC	8 cut(s)	1052, 1274, 1479, 1671, 1707, 2532, 2916, 2986
BcuI	ACTAGT	1 cut(s)	2234
BfaI	CTAG	5 cut(s)	2090, 2235, 2427, 3119, 3281
BfmI	CTRYAG	4 cut(s)	2441, 2484, 2533, 2681
BfoI	RGCGCY	1 cut(s)	857
BfrI	CTTAAG	2 cut(s)	2717, 3374
BfuAI	ACCTGC	2 cut(s)	1354, 1844
BfuI	GTATCC	3 cut(s)	328, 739, 2623
BglII	AGATCT	4 cut(s)	379, 724, 2017, 3259
BisI	GCNGC	7 cut(s)	252, 575, 650, 1455, 1579, 3469, 3524
BlnI	CCTAGG	1 cut(s)	3280
BlpI	GCTNAGC	1 cut(s)	1458
BlsI	GCNGC	7 cut(s)	253, 576, 651, 1456, 1580, 3470, 3525
BmcAI	AGTACT	2 cut(s)	3082, 3400
Bme1390I	CCNGG	1 cut(s)	1589
Bme18I	GGWCC	5 cut(s)	223, 1207, 2736, 2771, 3146
BmeT110I	CYCGRG	1 cut(s)	622
BmgBI	CACGTC	1 cut(s)	127
BmgT120I	GGNCC	8 cut(s)	223, 393, 394, 625, 1207, 2736, 2771, 3146
BmrFI	CCNGG	1 cut(s)	1589
BmrI	ACTGGG	3 cut(s)	1970, 2332, 2769
BmuI	ACTGGG	3 cut(s)	1970, 2332, 2769
BpiI	GAAGAC	3 cut(s)	1379, 1500, 1620
BpmI	CTGGAG	2 cut(s)	2954, 3471
Bpu10I	CCTNAGC	4 cut(s)	192, 2382, 2924, 3492
Bpu1102I	GCTNAGC	1 cut(s)	1458
Bpu14I	TTCGAA	1 cut(s)	1512
BpuEI	CTTGAG	1 cut(s)	2168
BpuMI	CCSGG	1 cut(s)	1589
BsaI	GGTCTC	1 cut(s)	2532
BsaJI	CCNNGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
BsaWI	WCCGGW	1 cut(s)	202
BsaXI	ACNNNNNCTCC	6 cut(s)	116, 146, 2392, 2422, 3032, 3062
Bsc4I	CCNNNNNNNGG	4 cut(s)	1588, 2217, 3286, 3545
Bse118I	RCCGGY	2 cut(s)	627, 680
Bse1I	ACTGG	9 cut(s)	95, 197, 1053, 1391, 1976, 2327, 2775, 2937, 3406
Bse21I	CCTNAGG	1 cut(s)	966
Bse3DI	GCAATG	2 cut(s)	1256, 1866
BseDI	CCNNGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
BseGI	GGATG	9 cut(s)	376, 667, 1060, 1237, 1735, 1764, 1971, 2226, 2968
BseLI	CCNNNNNNNGG	4 cut(s)	1588, 2217, 3286, 3545
BseMI	GCAATG	2 cut(s)	1256, 1866
BseMII	CTCAG	8 cut(s)	183, 272, 485, 771, 980, 1449, 2373, 3057
BseNI	ACTGG	9 cut(s)	95, 197, 1053, 1391, 1976, 2327, 2775, 2937, 3406
BseRI	GAGGAG	1 cut(s)	2384
BseSI	GKGCMC	1 cut(s)	397
BseXI	GCAGC	5 cut(s)	263, 661, 1565, 3455, 3535
BsgI	GTGCAG	2 cut(s)	315, 668
BshFI	GGCC	5 cut(s)	122, 395, 627, 680, 1840
BsiHKAI	GWGCWC	1 cut(s)	9
BsiHKCI	CYCGRG	1 cut(s)	622
BsiSI	CCGG	4 cut(s)	203, 628, 681, 1589
BslFI	GGGAC	5 cut(s)	209, 601, 2749, 2757, 3538
BslI	CCNNNNNNNGG	4 cut(s)	1588, 2217, 3286, 3545
BsmAI	GTCTC	8 cut(s)	1052, 1274, 1479, 1671, 1707, 2532, 2916, 2986
BsmBI	CGTCTC	1 cut(s)	1274
BsmFI	GGGAC	5 cut(s)	209, 601, 2749, 2757, 3538
BsmI	GAATGC	2 cut(s)	1263, 1520
BsnI	GGCC	5 cut(s)	122, 395, 627, 680, 1840
Bso31I	GGTCTC	1 cut(s)	2532
BsoBI	CYCGRG	1 cut(s)	622
Bsp119I	TTCGAA	1 cut(s)	1512
Bsp120I	GGGCCC	1 cut(s)	393
Bsp1286I	GDGCHC	3 cut(s)	9, 397, 1078
Bsp1407I	TGTACA	1 cut(s)	2298
Bsp1720I	GCTNAGC	1 cut(s)	1458
Bsp19I	CCATGG	4 cut(s)	75, 177, 834, 2625
BspACI	CCGC	5 cut(s)	574, 652, 1455, 1908, 2318
BspANI	GGCC	5 cut(s)	122, 395, 627, 680, 1840
BspCNI	CTCAG	8 cut(s)	184, 273, 484, 772, 979, 1450, 2374, 3058
BspHI	TCATGA	1 cut(s)	3247
BspMI	ACCTGC	2 cut(s)	1354, 1844
BspPI	GGATC	8 cut(s)	349, 362, 793, 1108, 1121, 2462, 2561, 2574
BspQI	GCTCTTC	1 cut(s)	1066
BspT104I	TTCGAA	1 cut(s)	1512
BspTI	CTTAAG	2 cut(s)	2717, 3374
BspTNI	GGTCTC	1 cut(s)	2532
BsrDI	GCAATG	2 cut(s)	1256, 1866
BsrFI	RCCGGY	2 cut(s)	627, 680
BsrGI	TGTACA	1 cut(s)	2298
BsrI	ACTGG	9 cut(s)	95, 197, 1053, 1391, 1976, 2327, 2775, 2937, 3406
BssAI	RCCGGY	2 cut(s)	627, 680
BssECI	CCNNGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
BssT1I	CCWWGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
Bst6I	CTCTTC	6 cut(s)	150, 1066, 1647, 2841, 2984, 3018
BstAFI	CTTAAG	2 cut(s)	2717, 3374
BstAUI	TGTACA	1 cut(s)	2298
BstBI	TTCGAA	1 cut(s)	1512
BstC8I	GCNNGC	7 cut(s)	629, 982, 1261, 1721, 1901, 2921, 3277
BstDSI	CCRYGG	4 cut(s)	75, 177, 834, 2625
BstEII	GGTNACC	1 cut(s)	2659
BstENI	CCTNNNNNAGG	1 cut(s)	3543
BstF5I	GGATG	9 cut(s)	376, 667, 1060, 1237, 1735, 1764, 1971, 2226, 2968
BstH2I	RGCGCY	1 cut(s)	857
BstHHI	GCGC	1 cut(s)	856
BstMAI	GTCTC	8 cut(s)	1052, 1274, 1479, 1671, 1707, 2532, 2916, 2986
BstMWI	GCNNNNNNNGC	7 cut(s)	476, 1260, 1316, 1403, 1837, 2387, 3376
BstNSI	RCATGY	6 cut(s)	932, 1036, 1666, 2765, 3461, 3502
BstPI	GGTNACC	1 cut(s)	2659
BstSCI	CCNGG	1 cut(s)	1587
BstSFI	CTRYAG	4 cut(s)	2441, 2484, 2533, 2681
BstSLI	GKGCMC	1 cut(s)	397
BstV1I	GCAGC	5 cut(s)	263, 661, 1565, 3455, 3535
BstV2I	GAAGAC	3 cut(s)	1379, 1500, 1620
BstX2I	RGATCY	7 cut(s)	354, 379, 724, 1113, 2017, 2566, 3259
BstYI	RGATCY	7 cut(s)	354, 379, 724, 1113, 2017, 2566, 3259
Bsu36I	CCTNAGG	1 cut(s)	966
BsuI	GTATCC	3 cut(s)	328, 739, 2623
BsuRI	GGCC	5 cut(s)	122, 395, 627, 680, 1840
BtgI	CCRYGG	4 cut(s)	75, 177, 834, 2625
BtrI	CACGTC	1 cut(s)	127
BtsCI	GGATG	9 cut(s)	376, 667, 1060, 1237, 1735, 1764, 1971, 2226, 2968
BtsI	GCAGTG	1 cut(s)	2028
BtsIMutI	CAGTG	6 cut(s)	102, 2028, 2312, 2747, 2782, 3324
BveI	ACCTGC	2 cut(s)	1354, 1844
Cac8I	GCNNGC	7 cut(s)	629, 982, 1261, 1721, 1901, 2921, 3277
CciI	TCATGA	1 cut(s)	3247
CfoI	GCGC	1 cut(s)	856
Cfr10I	RCCGGY	2 cut(s)	627, 680
Cfr13I	GGNCC	8 cut(s)	223, 393, 394, 625, 1207, 2736, 2771, 3146
Csp6I	GTAC	6 cut(s)	200, 764, 1080, 2299, 3081, 3399
CspCI	CAANNNNNGTGG	2 cut(s)	903, 938
CviQI	GTAC	6 cut(s)	200, 764, 1080, 2299, 3081, 3399
DraI	TTTAAA	1 cut(s)	1333
DraIII	CACNNNGTG	1 cut(s)	676
EaeI	YGGCCR	3 cut(s)	120, 678, 1838
Eam1104I	CTCTTC	6 cut(s)	150, 1066, 1647, 2841, 2984, 3018
EarI	CTCTTC	6 cut(s)	150, 1066, 1647, 2841, 2984, 3018
Ecl136II	GAGCTC	1 cut(s)	7
Eco130I	CCWWGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
Eco24I	GRGCYC	3 cut(s)	9, 397, 1078
Eco31I	GGTCTC	1 cut(s)	2532
Eco32I	GATATC	1 cut(s)	1603
Eco47I	GGWCC	5 cut(s)	223, 1207, 2736, 2771, 3146
Eco53kI	GAGCTC	1 cut(s)	7
Eco57I	CTGAAG	4 cut(s)	1512, 1643, 2771, 2897
Eco81I	CCTNAGG	1 cut(s)	966
Eco88I	CYCGRG	1 cut(s)	622
Eco91I	GGTNACC	1 cut(s)	2659
EcoICRI	GAGCTC	1 cut(s)	7
EcoNI	CCTNNNNNAGG	1 cut(s)	3543
EcoO109I	RGGNCCY	4 cut(s)	393, 394, 1207, 2736
EcoO65I	GGTNACC	1 cut(s)	2659
EcoRI	GAATTC	1 cut(s)	1167
EcoRV	GATATC	1 cut(s)	1603
EcoT14I	CCWWGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
EcoT22I	ATGCAT	3 cut(s)	518, 1520, 1764
EcoT38I	GRGCYC	3 cut(s)	9, 397, 1078
ErhI	CCWWGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
Esp3I	CGTCTC	1 cut(s)	1274
FalI	AAGNNNNNCTT	4 cut(s)	1312, 1344, 1550, 1582
FaqI	GGGAC	5 cut(s)	209, 601, 2749, 2757, 3538
FauI	CCCGC	1 cut(s)	1915
FauNDI	CATATG	2 cut(s)	2525, 3055
FblI	GTMKAC	1 cut(s)	1340
Fnu4HI	GCNGC	7 cut(s)	252, 575, 650, 1455, 1579, 3469, 3524
FokI	GGATG	9 cut(s)	383, 674, 1067, 1244, 1742, 1771, 1958, 2233, 2975
FriOI	GRGCYC	3 cut(s)	9, 397, 1078
Fsp4HI	GCNGC	7 cut(s)	252, 575, 650, 1455, 1579, 3469, 3524
FspBI	CTAG	5 cut(s)	2090, 2235, 2427, 3119, 3281
GlaI	GCGC	1 cut(s)	855
GluI	GCNGC	7 cut(s)	252, 575, 650, 1455, 1579, 3469, 3524
GsuI	CTGGAG	2 cut(s)	2954, 3471
HaeII	RGCGCY	1 cut(s)	857
HaeIII	GGCC	5 cut(s)	122, 395, 627, 680, 1840
HapII	CCGG	4 cut(s)	203, 628, 681, 1589
HhaI	GCGC	1 cut(s)	856
Hin6I	GCGC	1 cut(s)	854
HinP1I	GCGC	1 cut(s)	854
HincII	GTYRAC	4 cut(s)	915, 1155, 1341, 2208
HindII	GTYRAC	4 cut(s)	915, 1155, 1341, 2208
HindIII	AAGCTT	3 cut(s)	2921, 3368, 3377
HpaII	CCGG	4 cut(s)	203, 628, 681, 1589
HphI	GGTGA	4 cut(s)	982, 2906, 2950, 3230
Hpy166II	GTNNAC	9 cut(s)	130, 889, 915, 1155, 1341, 2208, 2424, 2649, 3322
Hpy8I	GTNNAC	9 cut(s)	130, 889, 915, 1155, 1341, 2208, 2424, 2649, 3322
Hpy99I	CGWCG	3 cut(s)	20, 128, 1342
HpyAV	CCTTC	5 cut(s)	637, 2268, 2446, 2872, 3053
HpyCH4IV	ACGT	4 cut(s)	126, 1002, 1337, 1993
HpyF10VI	GCNNNNNNNGC	7 cut(s)	476, 1260, 1316, 1403, 1837, 2387, 3376
HpySE526I	ACGT	4 cut(s)	126, 1002, 1337, 1993
HspAI	GCGC	1 cut(s)	854
KroI	GCCGGC	1 cut(s)	627
KroNI	GCCGGC	1 cut(s)	629
LguI	GCTCTTC	1 cut(s)	1066
LmnI	GCTCC	5 cut(s)	4, 259, 2387, 2413, 3157
Lsp1109I	GCAGC	5 cut(s)	263, 661, 1565, 3455, 3535
MaeI	CTAG	5 cut(s)	2090, 2235, 2427, 3119, 3281
MaeII	ACGT	4 cut(s)	126, 1002, 1337, 1993
MaeIII	GTNAC	6 cut(s)	1947, 2114, 2433, 2659, 2777, 2928
MfeI	CAATTG	2 cut(s)	423, 444
MflI	RGATCY	7 cut(s)	354, 379, 724, 1113, 2017, 2566, 3259
MhlI	GDGCHC	3 cut(s)	9, 397, 1078
MlsI	TGGCCA	1 cut(s)	1840
MluNI	TGGCCA	1 cut(s)	1840
MlyI	GAGTC	4 cut(s)	125, 1664, 1709, 2605
MmeI	TCCRAC	6 cut(s)	438, 583, 886, 1416, 1683, 3267
Mox20I	TGGCCA	1 cut(s)	1840
Mph1103I	ATGCAT	3 cut(s)	518, 1520, 1764
MroNI	GCCGGC	1 cut(s)	627
MroXI	GAANNNNTTC	1 cut(s)	2456
MscI	TGGCCA	1 cut(s)	1840
MslI	CAYNNNNRTG	5 cut(s)	582, 2624, 2859, 3246, 3456
Msp20I	TGGCCA	1 cut(s)	1840
MspA1I	CMGCKG	4 cut(s)	158, 652, 1457, 1910
MspCI	CTTAAG	2 cut(s)	2717, 3374
MspI	CCGG	4 cut(s)	203, 628, 681, 1589
MspR9I	CCNGG	1 cut(s)	1589
MunI	CAATTG	2 cut(s)	423, 444
Mva1269I	GAATGC	2 cut(s)	1263, 1520
MwoI	GCNNNNNNNGC	7 cut(s)	476, 1260, 1316, 1403, 1837, 2387, 3376
NaeI	GCCGGC	1 cut(s)	629
NciI	CCSGG	1 cut(s)	1589
NcoI	CCATGG	4 cut(s)	75, 177, 834, 2625
NdeI	CATATG	2 cut(s)	2525, 3055
NgoMIV	GCCGGC	1 cut(s)	627
NmuCI	GTSAC	1 cut(s)	2777
NsiI	ATGCAT	3 cut(s)	518, 1520, 1764
NspI	RCATGY	6 cut(s)	932, 1036, 1666, 2765, 3461, 3502
NspV	TTCGAA	1 cut(s)	1512
PagI	TCATGA	1 cut(s)	3247
PciI	ACATGT	4 cut(s)	928, 1032, 2761, 3498
PciSI	GCTCTTC	1 cut(s)	1066
PctI	GAATGC	2 cut(s)	1263, 1520
PdiI	GCCGGC	1 cut(s)	629
PdmI	GAANNNNTTC	1 cut(s)	2456
PfoI	TCCNGGA	1 cut(s)	1587
PkrI	GCNGC	7 cut(s)	253, 576, 651, 1456, 1580, 3470, 3525
PleI	GAGTC	4 cut(s)	125, 1663, 1708, 2605
PpsI	GAGTC	4 cut(s)	125, 1663, 1708, 2605
PpuMI	RGGWCCY	2 cut(s)	1207, 2736
PscI	ACATGT	4 cut(s)	928, 1032, 2761, 3498
PsiI	TTATAA	1 cut(s)	1121
Psp124BI	GAGCTC	1 cut(s)	9
Psp5II	RGGWCCY	2 cut(s)	1207, 2736
PspEI	GGTNACC	1 cut(s)	2659
PspOMI	GGGCCC	1 cut(s)	393
PspPI	GGNCC	8 cut(s)	223, 393, 394, 625, 1207, 2736, 2771, 3146
PspPPI	RGGWCCY	2 cut(s)	1207, 2736
PsrI	GAACNNNNNNTAC	2 cut(s)	2286, 2318
PsuI	RGATCY	7 cut(s)	354, 379, 724, 1113, 2017, 2566, 3259
PvuII	CAGCTG	1 cut(s)	158
RsaI	GTAC	6 cut(s)	201, 765, 1081, 2300, 3082, 3400
RsaNI	GTAC	6 cut(s)	200, 764, 1080, 2299, 3081, 3399
RseI	CAYNNNNRTG	5 cut(s)	582, 2624, 2859, 3246, 3456
SacI	GAGCTC	1 cut(s)	9
SalI	GTCGAC	1 cut(s)	1339
SapI	GCTCTTC	1 cut(s)	1066
SatI	GCNGC	7 cut(s)	252, 575, 650, 1455, 1579, 3469, 3524
Sau96I	GGNCC	8 cut(s)	223, 393, 394, 625, 1207, 2736, 2771, 3146
ScaI	AGTACT	2 cut(s)	3082, 3400
SchI	GAGTC	4 cut(s)	125, 1664, 1709, 2605
ScrFI	CCNGG	1 cut(s)	1589
SduI	GDGCHC	3 cut(s)	9, 397, 1078
SfcI	CTRYAG	4 cut(s)	2441, 2484, 2533, 2681
SfuI	TTCGAA	1 cut(s)	1512
SinI	GGWCC	5 cut(s)	223, 1207, 2736, 2771, 3146
SmiMI	CAYNNNNRTG	5 cut(s)	582, 2624, 2859, 3246, 3456
SmlI	CTYRAG	3 cut(s)	2147, 2717, 3374
SmoI	CTYRAG	3 cut(s)	2147, 2717, 3374
SpeI	ACTAGT	1 cut(s)	2234
SsiI	CCGC	5 cut(s)	574, 652, 1455, 1908, 2318
SspI	AATATT	3 cut(s)	1012, 1960, 2726
SspMI	CTAG	5 cut(s)	2090, 2235, 2427, 3119, 3281
SstI	GAGCTC	1 cut(s)	9
StyD4I	CCNGG	1 cut(s)	1587
StyI	CCWWGG	9 cut(s)	75, 177, 257, 834, 1203, 1841, 2625, 2731, 3280
TaiI	ACGT	4 cut(s)	129, 1005, 1340, 1996
TatI	WGTACW	3 cut(s)	2298, 3080, 3398
TauI	GCSGC	2 cut(s)	577, 1457
TscAI	CASTG	6 cut(s)	102, 2035, 2312, 2754, 2782, 3324
TseFI	GTSAC	1 cut(s)	2777
TseI	GCWGC	5 cut(s)	251, 649, 1578, 3468, 3523
Tsp45I	GTSAC	1 cut(s)	2777
TspGWI	ACGGA	2 cut(s)	4, 906
TspRI	CASTG	6 cut(s)	102, 2035, 2312, 2754, 2782, 3324
Vha464I	CTTAAG	2 cut(s)	2717, 3374
VpaK11BI	GGWCC	5 cut(s)	223, 1207, 2736, 2771, 3146
XagI	CCTNNNNNAGG	1 cut(s)	3543
XapI	RAATTY	6 cut(s)	436, 1167, 1324, 1791, 2839, 3001
XbaI	TCTAGA	1 cut(s)	2089
XceI	RCATGY	6 cut(s)	932, 1036, 1666, 2765, 3461, 3502
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1723, 2782
XmaJI	CCTAGG	1 cut(s)	3280
XmiI	GTMKAC	1 cut(s)	1340
XmnI	GAANNNNTTC	1 cut(s)	2456
XspI	CTAG	5 cut(s)	2090, 2235, 2427, 3119, 3281
ZrmI	AGTACT	2 cut(s)	3082, 3400
Zsp2I	ATGCAT	3 cut(s)	518, 1520, 1764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.