Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007806.1

Orthogroup ID

OG0015588

Physical Location & Seq

Genomic Coordinates Reverse (-)

73982 .. 79290

Gene Structure 5309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007806.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3852 bp

atgaccgatactgtatcttctggagcatctaatgcaatgtcgaaaatggatgggtcattgaagcgtggttcaaatgatattggatgcaattttgaagaagcaaaagctaagaagaaacaaaaaactagacacaaagaggaagtgagggaagaagttggagttattgtacaagaagatgcagaaattgaagcgcacaaaaaaaagcagcaaaatcagctgatggaatcatcgtcagctctcatggttgagccaaaatcagaggataatcaagaggcagtggacctggatccttctacatctcttctttcatcagcttctctgaagaaatatgatgtttttttgagtttcaggggtgcagacactcgtaaggattttctatcccacttataccatgaattgagaaatgtgagagggattcaaacgttcatggatgacagagagcttgaactaggggctcctatttctccaagtctgctaaaggcaattgaagaatcaaattttgcaattgttgttttgtcaaaagactatgctcaatctgcatggtgtttggaggaacttacaaagatttgtgactgcatgaaagacaataacagaattataccgcttttttatcatgtcgaacctactgatgtgcggtatcagacgtgtagttttggagatgctttcaaagatcatgtaaacaatgggtggcacagttcagagcagctggagcggtggagaatagctttagaaacggttgccagtttctctgggtgtaatgcaaaggatcacaagactgaaagagaagttgtcgaagccgttgtggaatctgtgtgcaggagagtaagacatattgaaattgagtctattatttcctccagagattttgaagtatttaaagcaacaagagaagccatggacgatgtaatgaaggcgctaaaagatgaaatggtcactgccattggggtcttcggcatgggaggcatcggaaaaacaaccatggtggaacatgtcagtgtagaagcccaaaaaaaggggcttttccatcaggtgattatggctgggatatcccaaaatcccaactcgtgggaaatccttaacttgtgggatattcaggggagattagcatgcatgctgggattcaaattggaggatgacgaaatatttgcaagagcctgcacattgaggaagaggttattgagtaaagataggattcttattatcttggacaacatttggaaggaaatagagttgaaaagcataggaattcctgaataccacgagcttaaaagacgcaattccaaggttctactcaccacaaggagattggaagtttgccattatatggactgccaagcaagcattcctctcgataccttagccgaagatgattctctgaagttgtttgcgaagatagcaagaaagtcttttgaaacaccaaccaatttctatgacattgcagtggaggtagcaaaagaatgtgctggtcttccagttgcgttgacagcagttgcaaaggcacttcgaggtaaaaacttccaccaatggaaggaagctgctaggcggctaaaggagtctaaatctcccaaccctgaagatgagggacgtgtatttgaatgcataaagttaagctatgattacttgaaatctgatgactccaaattgtgcttcttgctctgctgcctattcccaaagggttatgacatccaaattgaagacttgctgaagtatgggattgggaaaggattgtttcaagagtatgacatacaagaagccagaaccacaatacattccgtggtagggtcccttaaagattctagcctacttttggatggtaaaatggacaggggatgcgtaaggatgcatgacgtcatcagagatgttgccatatcaatttccttatctaaggatgggcacccacgcttttttgttaaagctggttgtgagttagagagttggccaagaattgatgcacatgggtgctacaatgcaatctcactaatgaagaacaaaatacgcaagcttcccagagccttggtatgttcagaactccagattctcttgttacaaagtaatttttatgatgagatcccagaattgttttttcaaagtctaaaggcattaagggttttagatcttagccagactagcatttcattactacccccatcattcaatcttttaaccagtctccacactttatatctagatggttgcctgtcaatgacaagtgacatatctctactgggaaaattgggaaaacttgagattcttagtatgagagaacttcgtcttgtgaaattgccggaagaaataggacaattgaccaacctaaggatgctggacttcactagtgaatgtgttgatatagttccttctaatgtgataggcaaactcagtgaattagaagaactgtacatgcagtgcaattttgcggactgggggagtaaaggagaggggagtggagtcgagagaaatatagttgaggagagtgaagctgagggaccaagagaggaaagtaatgctttctttgatgagttaactagcttgttacatctacacaatttgaaagttttcatatctgattcaaaatgcttacctacaaatgttgacggtgaactgaagtggaagaattttgacatatgtattggcagagacccgtcaattagagaattgtctttggattcaagttcttcaccggattcaaaagccttgactcttgacacaagcatggataccttaccgaaatggtttattggtttggtgaccaagaaaacagagaagctacagtatataaactgtcgcggtttaggcaatcttcttaaggaatattaccaagggacgttacatgcactgaagtatttacatgttattggtcccagtgagaaattggaacagttgatgaccccaataacaatggttccaaatgaaagtgtgtttgagaatttggaagagttgcatctcgaagaagtgaattgtctgaaggagttatgtgttggtgaattaccaaatgagtctctatgcaagcttaggttactgaaggtgagaggttgtcatgaattgatgaatgcacttttacaatctaatttgttgaagagattacaaaatttggaaacactaagttgtgaagagatggataaattggagtatgtgttttcatttgaagggtctgaggtagaacaaagtactctgacagagttgatagagatgaaattgaaggatctagggaacctaataaagatatggaatggtcctgctcctcgtggaatctttcgtcatgttaaagttttgatagttttcgagtgcaataagctgaaaaatctcttcacatatgacgtagctcaccatcttcatgacttggaagatctttcagtaaaggcttgccgagggttggagagagttattgaagcaagcgaggaaacagtgcacaacaagatagttttaccaaaattgaagaagttgactttgaaagagcttcgtaagcttacaaggttatatggaagtaatggaagtgctagtaatgatgaggaaaaaattgagtttcctttattggagcactcggatgtggaacgctgcaaaaatttcaattctccagctaagaagatgttggattcagtgattaataagcagcatgttctgattctttcacaagagacaggtcagagagagacacatactttaagcagaagaagagaactagcaaatttggaaaagctagtttgcgagaaaacggatactgatagcgataacaatgttcagttcaatggtgatgaacaagcagaagaaggtttcgattctttccaagatacaggtcagacagaggcacctattttaaccacatcatcattccagaactttgttgactctaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC TIR

Protein Analysis

1283

Amino Acids

145.55

Weight (kDa)

5.51

Isoelectric Point (pI)

45.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015588)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g44030 FvH4_3g44030
rosa_chinensis	RchiOBHm_Chr5g0079591 RchiOBHm_Chr5g0080151 RchiOBHm_Chr5g0080161 RchiOBHm_Chr5g0080261 RchiOBHm_Chr5g0080311
rosa_multiflora	Rmu_sc0001803.1_g000037 Rmu_sc0002513.1_g000013 Rmu_sc0007806.1_g000017 Rmu_sc0009793.1_g000003
rosa_roxburghii	Rroxscaffold_1G00003050
rosa_rugosa	Rorug05G0468000
rosa_wichuraiana	Rw0G023400 Rw5G048450 Rw5G048480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1851
AccB1I	GGYRCC	2 cut(s)	1893, 3802
AccB7I	CCANNNNNTGG	2 cut(s)	1065, 1324
AccBSI	CCGCTC	1 cut(s)	712
AccII	CGCG	1 cut(s)	2784
AciI	CCGC	6 cut(s)	602, 634, 712, 1543, 2414, 2784
AclI	AACGTT	1 cut(s)	422
AclWI	GGATC	5 cut(s)	281, 294, 774, 2062, 3207
AcoI	YGGCCR	1 cut(s)	1937
AcsI	RAATTY	7 cut(s)	496, 1245, 2611, 2923, 3085, 3559, 3682
AcuI	CTGAAG	8 cut(s)	341, 1397, 1593, 1724, 2621, 2855, 2981, 3038
AcyI	GRCGYC	1 cut(s)	1848
AfaI	GTAC	3 cut(s)	168, 2396, 3166
AfiI	CCNNNNNNNGG	8 cut(s)	1012, 1065, 1324, 1528, 1779, 1807, 2313, 3370
AflII	CTTAAG	1 cut(s)	2801
AflIII	ACRYGT	4 cut(s)	644, 988, 1585, 2845
AhlI	ACTAGT	1 cut(s)	2330
AjiI	CACGTC	2 cut(s)	645, 1586
AjnI	CCWGG	1 cut(s)	282
AjuI	GAANNNNNNNTTGG	4 cut(s)	1326, 1358, 1631, 1663
AleI	CACNNNNGTG	1 cut(s)	1957
Alw21I	GWGCWC	2 cut(s)	3408, 3537
Alw26I	GTCTC	5 cut(s)	2174, 2628, 3000, 3626, 3641
Alw44I	GTGCAC	1 cut(s)	3404
AlwI	GGATC	5 cut(s)	281, 294, 774, 2062, 3207
AoxI	GGCC	1 cut(s)	1937
ApaLI	GTGCAC	1 cut(s)	3404
ApeKI	GCWGC	6 cut(s)	205, 703, 1535, 1659, 3552, 3607
ApoI	RAATTY	7 cut(s)	496, 1245, 2611, 2923, 3085, 3559, 3682
ArsI	GACNNNNNNTTYG	2 cut(s)	1127, 1159
AseI	ATTAAT	1 cut(s)	3600
Asp700I	GAANNNNTTC	1 cut(s)	2552
AspLEI	GCGC	2 cut(s)	193, 916
AspS9I	GGNCC	5 cut(s)	280, 1782, 2483, 2855, 3230
AsuHPI	GGTGA	9 cut(s)	1042, 1285, 2606, 2667, 2755, 2990, 3034, 3314, 3758
AvaII	GGWCC	5 cut(s)	280, 1782, 2483, 2855, 3230
AxyI	CCTNAGG	1 cut(s)	2312
BaeGI	GKGCMC	2 cut(s)	1896, 3408
BalI	TGGCCA	1 cut(s)	1939
BamHI	GGATCC	1 cut(s)	286
BanI	GGYRCC	2 cut(s)	1893, 3802
BanII	GRGCYC	1 cut(s)	457
BauI	CACGAG	3 cut(s)	1063, 1259, 3240
BbsI	GAAGAC	3 cut(s)	940, 1460, 1701
Bbv12I	GWGCWC	2 cut(s)	3408, 3537
BbvCI	CCTCAGC	1 cut(s)	2478
BbvI	GCAGC	6 cut(s)	217, 715, 1522, 1646, 3539, 3619
BccI	CCATC	9 cut(s)	44, 214, 1032, 1805, 1883, 2155, 2183, 3106, 3333
BceAI	ACGGC	1 cut(s)	782
BcgI	CGANNNNNNTGC	4 cut(s)	1127, 1161, 1330, 1364
BciT130I	CCWGG	1 cut(s)	284
BciVI	GTATCC	2 cut(s)	2707, 3706
BcoDI	GTCTC	5 cut(s)	2174, 2628, 3000, 3626, 3641
BcuI	ACTAGT	1 cut(s)	2330
BfmI	CTRYAG	1 cut(s)	2765
BfoI	RGCGCY	1 cut(s)	917
BfrI	CTTAAG	1 cut(s)	2801
BfuI	GTATCC	2 cut(s)	2707, 3706
BglII	AGATCT	2 cut(s)	2113, 3343
BisI	GCNGC	7 cut(s)	206, 704, 1536, 1544, 1660, 3553, 3608
BlsI	GCNGC	7 cut(s)	207, 705, 1537, 1545, 1661, 3554, 3609
BmcAI	AGTACT	1 cut(s)	3166
Bme1390I	CCNGG	1 cut(s)	284
Bme18I	GGWCC	5 cut(s)	280, 1782, 2483, 2855, 3230
BmgBI	CACGTC	2 cut(s)	645, 1586
BmgT120I	GGNCC	5 cut(s)	280, 1782, 2483, 2855, 3230
BmrFI	CCNGG	1 cut(s)	284
BmrI	ACTGGG	3 cut(s)	2234, 2428, 2853
BmuI	ACTGGG	3 cut(s)	2234, 2428, 2853
BpiI	GAAGAC	3 cut(s)	940, 1460, 1701
BpmI	CTGGAG	5 cut(s)	42, 728, 841, 2015, 3555
Bpu10I	CCTNAGC	3 cut(s)	1357, 2478, 3008
BpuEI	CTTGAG	1 cut(s)	2264
BsaHI	GRCGYC	1 cut(s)	1848
BsaI	GGTCTC	1 cut(s)	2628
BsaJI	CCNNGG	7 cut(s)	894, 978, 1281, 1773, 2013, 2815, 3364
BsaWI	WCCGGW	1 cut(s)	2677
BsaXI	ACNNNNNCTCC	4 cut(s)	150, 180, 3116, 3146
Bsc4I	CCNNNNNNNGG	8 cut(s)	1012, 1065, 1324, 1528, 1779, 1807, 2313, 3370
Bse1I	ACTGG	6 cut(s)	741, 1472, 2166, 2229, 2423, 2859
Bse21I	CCTNAGG	1 cut(s)	2312
Bse3DI	GCAATG	2 cut(s)	42, 1434
BseBI	CCWGG	1 cut(s)	284
BseDI	CCNNGG	7 cut(s)	894, 978, 1281, 1773, 2013, 2815, 3364
BseLI	CCNNNNNNNGG	8 cut(s)	1012, 1065, 1324, 1528, 1779, 1807, 2313, 3370
BseMI	GCAATG	2 cut(s)	42, 1434
BseMII	CTCAG	3 cut(s)	2389, 2469, 3141
BseNI	ACTGG	6 cut(s)	741, 1472, 2166, 2229, 2423, 2859
BseRI	GAGGAG	2 cut(s)	2480, 3228
BseSI	GKGCMC	2 cut(s)	1896, 3408
BseXI	GCAGC	6 cut(s)	217, 715, 1522, 1646, 3539, 3619
BseYI	CCCAGC	2 cut(s)	1040, 1114
BsgI	GTGCAG	3 cut(s)	375, 835, 1141
Bsh1236I	CGCG	1 cut(s)	2784
BshFI	GGCC	1 cut(s)	1939
BshNI	GGYRCC	2 cut(s)	1893, 3802
BsiHKAI	GWGCWC	2 cut(s)	3408, 3537
BsiSI	CCGG	2 cut(s)	2285, 2678
BslFI	GGGAC	5 cut(s)	1596, 1768, 2496, 2833, 2841
BslI	CCNNNNNNNGG	8 cut(s)	1012, 1065, 1324, 1528, 1779, 1807, 2313, 3370
BsmAI	GTCTC	5 cut(s)	2174, 2628, 3000, 3626, 3641
BsmFI	GGGAC	5 cut(s)	1596, 1768, 2496, 2833, 2841
BsmI	GAATGC	3 cut(s)	1341, 1601, 3052
BsnI	GGCC	1 cut(s)	1939
Bso31I	GGTCTC	1 cut(s)	2628
Bsp1286I	GDGCHC	4 cut(s)	457, 1896, 3408, 3537
Bsp1407I	TGTACA	2 cut(s)	166, 2394
Bsp143I	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
Bsp19I	CCATGG	2 cut(s)	894, 978
BspACI	CCGC	6 cut(s)	602, 634, 712, 1543, 2414, 2784
BspANI	GGCC	1 cut(s)	1939
BspCNI	CTCAG	3 cut(s)	2388, 2470, 3142
BspFNI	CGCG	1 cut(s)	2784
BspHI	TCATGA	2 cut(s)	3034, 3331
BspPI	GGATC	5 cut(s)	281, 294, 774, 2062, 3207
BspT107I	GGYRCC	2 cut(s)	1893, 3802
BspTI	CTTAAG	1 cut(s)	2801
BspTNI	GGTCTC	1 cut(s)	2628
BsrBI	CCGCTC	1 cut(s)	712
BsrDI	GCAATG	2 cut(s)	42, 1434
BsrGI	TGTACA	2 cut(s)	166, 2394
BsrI	ACTGG	6 cut(s)	741, 1472, 2166, 2229, 2423, 2859
BssECI	CCNNGG	7 cut(s)	894, 978, 1281, 1773, 2013, 2815, 3364
BssMI	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
BssNI	GRCGYC	1 cut(s)	1848
BssSI	CACGAG	3 cut(s)	1063, 1259, 3240
BssT1I	CCWWGG	5 cut(s)	894, 978, 1281, 2013, 2815
Bst2BI	CACGAG	3 cut(s)	1063, 1259, 3240
Bst2UI	CCWGG	1 cut(s)	284
Bst4CI	ACNGT	9 cut(s)	13, 695, 736, 2394, 2594, 2769, 2780, 2877, 3403
Bst6I	CTCTTC	7 cut(s)	306, 1163, 2925, 3068, 3102, 3308, 3664
BstACI	GRCGYC	1 cut(s)	1848
BstAFI	CTTAAG	1 cut(s)	2801
BstAPI	GCANNNNNTGC	1 cut(s)	32
BstAUI	TGTACA	2 cut(s)	166, 2394
BstC8I	GCNNGC	8 cut(s)	1108, 1112, 1156, 1339, 2000, 3005, 3361, 3391
BstDSI	CCRYGG	3 cut(s)	894, 978, 1773
BstEII	GGTNACC	1 cut(s)	2743
BstFNI	CGCG	1 cut(s)	2784
BstH2I	RGCGCY	1 cut(s)	917
BstHHI	GCGC	2 cut(s)	193, 916
BstKTI	GATC	7 cut(s)	289, 673, 769, 2070, 2116, 3202, 3346
BstMAI	GTCTC	5 cut(s)	2174, 2628, 3000, 3626, 3641
BstMBI	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
BstNI	CCWGG	1 cut(s)	284
BstNSI	RCATGY	7 cut(s)	992, 1110, 1114, 2401, 2831, 2849, 3614
BstPI	GGTNACC	1 cut(s)	2743
BstSCI	CCNGG	1 cut(s)	282
BstSFI	CTRYAG	1 cut(s)	2765
BstSLI	GKGCMC	2 cut(s)	1896, 3408
BstUI	CGCG	1 cut(s)	2784
BstV1I	GCAGC	6 cut(s)	217, 715, 1522, 1646, 3539, 3619
BstV2I	GAAGAC	3 cut(s)	940, 1460, 1701
BstX2I	RGATCY	5 cut(s)	286, 2067, 2113, 3199, 3343
BstXI	CCANNNNNNTGG	1 cut(s)	2014
BstYI	RGATCY	5 cut(s)	286, 2067, 2113, 3199, 3343
Bsu36I	CCTNAGG	1 cut(s)	2312
BsuI	GTATCC	2 cut(s)	2707, 3706
BsuRI	GGCC	1 cut(s)	1939
BtgI	CCRYGG	3 cut(s)	894, 978, 1773
BtrI	CACGTC	2 cut(s)	645, 1586
BtsI	GCAGTG	4 cut(s)	282, 933, 1446, 2408
Cac8I	GCNNGC	8 cut(s)	1108, 1112, 1156, 1339, 2000, 3005, 3361, 3391
CciI	TCATGA	2 cut(s)	3034, 3331
CfoI	GCGC	2 cut(s)	193, 916
Cfr13I	GGNCC	5 cut(s)	280, 1782, 2483, 2855, 3230
CseI	GACGC	1 cut(s)	1281
Csp6I	GTAC	3 cut(s)	167, 2395, 3165
CspCI	CAANNNNNGTGG	2 cut(s)	963, 998
CviQI	GTAC	3 cut(s)	167, 2395, 3165
DpnI	GATC	7 cut(s)	288, 672, 768, 2069, 2115, 3201, 3345
DpnII	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
DraI	TTTAAA	1 cut(s)	877
EaeI	YGGCCR	1 cut(s)	1937
Eam1104I	CTCTTC	7 cut(s)	306, 1163, 2925, 3068, 3102, 3308, 3664
EarI	CTCTTC	7 cut(s)	306, 1163, 2925, 3068, 3102, 3308, 3664
Eco130I	CCWWGG	5 cut(s)	894, 978, 1281, 2013, 2815
Eco24I	GRGCYC	1 cut(s)	457
Eco31I	GGTCTC	1 cut(s)	2628
Eco32I	GATATC	1 cut(s)	1047
Eco47I	GGWCC	5 cut(s)	280, 1782, 2483, 2855, 3230
Eco57I	CTGAAG	8 cut(s)	341, 1397, 1593, 1724, 2621, 2855, 2981, 3038
Eco81I	CCTNAGG	1 cut(s)	2312
Eco91I	GGTNACC	1 cut(s)	2743
EcoO109I	RGGNCCY	1 cut(s)	1782
EcoO65I	GGTNACC	1 cut(s)	2743
EcoRI	GAATTC	1 cut(s)	1245
EcoRII	CCWGG	1 cut(s)	282
EcoRV	GATATC	1 cut(s)	1047
EcoT14I	CCWWGG	5 cut(s)	894, 978, 1281, 2013, 2815
EcoT22I	ATGCAT	3 cut(s)	1112, 1601, 1845
EcoT38I	GRGCYC	1 cut(s)	457
ErhI	CCWWGG	5 cut(s)	894, 978, 1281, 2013, 2815
FalI	AAGNNNNNCTT	4 cut(s)	1390, 1422, 2488, 2520
FaqI	GGGAC	5 cut(s)	1596, 1768, 2496, 2833, 2841
FauNDI	CATATG	2 cut(s)	2621, 3310
Fnu4HI	GCNGC	7 cut(s)	206, 704, 1536, 1544, 1660, 3553, 3608
FriOI	GRGCYC	1 cut(s)	457
Fsp4HI	GCNGC	7 cut(s)	206, 704, 1536, 1544, 1660, 3553, 3608
GlaI	GCGC	2 cut(s)	192, 915
GluI	GCNGC	7 cut(s)	206, 704, 1536, 1544, 1660, 3553, 3608
GsaI	CCCAGC	2 cut(s)	1044, 1118
GsuI	CTGGAG	5 cut(s)	42, 728, 841, 2015, 3555
HaeII	RGCGCY	1 cut(s)	917
HaeIII	GGCC	1 cut(s)	1939
HapII	CCGG	2 cut(s)	2285, 2678
HgaI	GACGC	1 cut(s)	1281
HhaI	GCGC	2 cut(s)	193, 916
Hin1I	GRCGYC	1 cut(s)	1848
Hin6I	GCGC	2 cut(s)	191, 914
HinP1I	GCGC	2 cut(s)	191, 914
HincII	GTYRAC	5 cut(s)	1482, 2520, 2590, 3441, 3841
HindII	GTYRAC	5 cut(s)	1482, 2520, 2590, 3441, 3841
HindIII	AAGCTT	3 cut(s)	2000, 3005, 3461
HpaI	GTTAAC	1 cut(s)	2520
HpaII	CCGG	2 cut(s)	2285, 2678
HphI	GGTGA	9 cut(s)	1042, 1285, 2606, 2667, 2755, 2990, 3034, 3314, 3758
Hpy166II	GTNNAC	9 cut(s)	280, 679, 1482, 2520, 2590, 2597, 3406, 3441, 3841
Hpy8I	GTNNAC	9 cut(s)	280, 679, 1482, 2520, 2590, 2597, 3406, 3441, 3841
HpyCH4III	ACNGT	9 cut(s)	13, 695, 736, 2394, 2594, 2769, 2780, 2877, 3403
HpyCH4IV	ACGT	6 cut(s)	422, 644, 1585, 1848, 2822, 3315
HpySE526I	ACGT	6 cut(s)	422, 644, 1585, 1848, 2822, 3315
Hsp92I	GRCGYC	1 cut(s)	1848
HspAI	GCGC	2 cut(s)	191, 914
KflI	GGGWCCC	1 cut(s)	1782
KspAI	GTTAAC	1 cut(s)	2520
Kzo9I	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
LmnI	GCTCC	5 cut(s)	23, 460, 709, 3241, 3532
Lsp1109I	GCAGC	6 cut(s)	217, 715, 1522, 1646, 3539, 3619
MaeII	ACGT	6 cut(s)	422, 644, 1585, 1848, 2822, 3315
MaeIII	GTNAC	8 cut(s)	569, 931, 2043, 2210, 2529, 2743, 2823, 3012
MalI	GATC	7 cut(s)	288, 672, 768, 2069, 2115, 3201, 3345
MbiI	CCGCTC	1 cut(s)	712
MboI	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
MfeI	CAATTG	3 cut(s)	483, 504, 2300
MflI	RGATCY	5 cut(s)	286, 2067, 2113, 3199, 3343
MhlI	GDGCHC	4 cut(s)	457, 1896, 3408, 3537
MlsI	TGGCCA	1 cut(s)	1939
MluNI	TGGCCA	1 cut(s)	1939
MlyI	GAGTC	7 cut(s)	851, 1562, 1628, 2454, 2689, 3002, 3836
MmeI	TCCRAC	3 cut(s)	136, 3351, 3567
Mox20I	TGGCCA	1 cut(s)	1939
Mph1103I	ATGCAT	3 cut(s)	1112, 1601, 1845
MroXI	GAANNNNTTC	1 cut(s)	2552
MscI	TGGCCA	1 cut(s)	1939
MslI	CAYNNNNRTG	6 cut(s)	993, 1439, 1957, 2708, 3330, 3540
Msp20I	TGGCCA	1 cut(s)	1939
MspA1I	CMGCKG	2 cut(s)	217, 706
MspCI	CTTAAG	1 cut(s)	2801
MspI	CCGG	2 cut(s)	2285, 2678
MspR9I	CCNGG	1 cut(s)	284
MunI	CAATTG	3 cut(s)	483, 504, 2300
Mva1269I	GAATGC	3 cut(s)	1341, 1601, 3052
MvaI	CCWGG	1 cut(s)	284
MvnI	CGCG	1 cut(s)	2784
NcoI	CCATGG	2 cut(s)	894, 978
NdeI	CATATG	2 cut(s)	2621, 3310
NdeII	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
NmeAIII	GCCGAG	1 cut(s)	3389
NmuCI	GTSAC	4 cut(s)	569, 931, 2210, 2743
NsiI	ATGCAT	3 cut(s)	1112, 1601, 1845
NspI	RCATGY	7 cut(s)	992, 1110, 1114, 2401, 2831, 2849, 3614
OliI	CACNNNNGTG	1 cut(s)	1957
PaeI	GCATGC	2 cut(s)	1110, 1114
PagI	TCATGA	2 cut(s)	3034, 3331
PciI	ACATGT	2 cut(s)	988, 2845
PctI	GAATGC	3 cut(s)	1341, 1601, 3052
PdmI	GAANNNNTTC	1 cut(s)	2552
PflMI	CCANNNNNTGG	2 cut(s)	1065, 1324
PkrI	GCNGC	7 cut(s)	207, 705, 1537, 1545, 1661, 3554, 3609
PleI	GAGTC	7 cut(s)	850, 1561, 1628, 2453, 2689, 3001, 3836
PpsI	GAGTC	7 cut(s)	850, 1561, 1628, 2453, 2689, 3001, 3836
PpuMI	RGGWCCY	1 cut(s)	1782
PscI	ACATGT	2 cut(s)	988, 2845
PshBI	ATTAAT	1 cut(s)	3600
Psp1406I	AACGTT	1 cut(s)	422
Psp5II	RGGWCCY	1 cut(s)	1782
Psp6I	CCWGG	1 cut(s)	282
PspEI	GGTNACC	1 cut(s)	2743
PspFI	CCCAGC	2 cut(s)	1040, 1114
PspGI	CCWGG	1 cut(s)	282
PspPI	GGNCC	5 cut(s)	280, 1782, 2483, 2855, 3230
PspPPI	RGGWCCY	1 cut(s)	1782
PsuI	RGATCY	5 cut(s)	286, 2067, 2113, 3199, 3343
PvuII	CAGCTG	2 cut(s)	217, 706
RsaI	GTAC	3 cut(s)	168, 2396, 3166
RsaNI	GTAC	3 cut(s)	167, 2395, 3165
RseI	CAYNNNNRTG	6 cut(s)	993, 1439, 1957, 2708, 3330, 3540
SatI	GCNGC	7 cut(s)	206, 704, 1536, 1544, 1660, 3553, 3608
Sau3AI	GATC	7 cut(s)	286, 670, 766, 2067, 2113, 3199, 3343
Sau96I	GGNCC	5 cut(s)	280, 1782, 2483, 2855, 3230
ScaI	AGTACT	1 cut(s)	3166
SchI	GAGTC	7 cut(s)	851, 1562, 1628, 2454, 2689, 3002, 3836
ScrFI	CCNGG	1 cut(s)	284
SduI	GDGCHC	4 cut(s)	457, 1896, 3408, 3537
SfcI	CTRYAG	1 cut(s)	2765
SinI	GGWCC	5 cut(s)	280, 1782, 2483, 2855, 3230
SmiMI	CAYNNNNRTG	6 cut(s)	993, 1439, 1957, 2708, 3330, 3540
SmlI	CTYRAG	2 cut(s)	2243, 2801
SmoI	CTYRAG	2 cut(s)	2243, 2801
SpeI	ACTAGT	1 cut(s)	2330
SphI	GCATGC	2 cut(s)	1110, 1114
SsiI	CCGC	6 cut(s)	602, 634, 712, 1543, 2414, 2784
SspI	AATATT	2 cut(s)	1143, 2810
StyD4I	CCNGG	1 cut(s)	282
StyI	CCWWGG	5 cut(s)	894, 978, 1281, 2013, 2815
TaaI	ACNGT	9 cut(s)	13, 695, 736, 2394, 2594, 2769, 2780, 2877, 3403
TaiI	ACGT	6 cut(s)	425, 647, 1588, 1851, 2825, 3318
TaqI	TCGA	9 cut(s)	41, 618, 792, 1350, 1504, 2448, 2943, 3279, 3771
TaqII	GACCGA	1 cut(s)	20
TatI	WGTACW	3 cut(s)	166, 2394, 3164
TauI	GCSGC	1 cut(s)	1546
TseFI	GTSAC	4 cut(s)	569, 931, 2210, 2743
TseI	GCWGC	6 cut(s)	205, 703, 1535, 1659, 3552, 3607
Tsp45I	GTSAC	4 cut(s)	569, 931, 2210, 2743
TspGWI	ACGGA	2 cut(s)	1762, 3725
Van91I	CCANNNNNTGG	2 cut(s)	1065, 1324
Vha464I	CTTAAG	1 cut(s)	2801
VneI	GTGCAC	1 cut(s)	3404
VpaK11BI	GGWCC	5 cut(s)	280, 1782, 2483, 2855, 3230
VspI	ATTAAT	1 cut(s)	3600
XapI	RAATTY	7 cut(s)	496, 1245, 2611, 2923, 3085, 3559, 3682
XbaI	TCTAGA	1 cut(s)	2185
XceI	RCATGY	7 cut(s)	992, 1110, 1114, 2401, 2831, 2849, 3614
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1303, 2866
XmnI	GAANNNNTTC	1 cut(s)	2552
ZraI	GACGTC	1 cut(s)	1849
ZrmI	AGTACT	1 cut(s)	3166
Zsp2I	ATGCAT	3 cut(s)	1112, 1601, 1845

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.