Rorug05G0468000

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
64459022 .. 64461236
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0468000.1

Sequence Viewer

Length: 1260 bp
ATGGGTCGTACCAGGGAAGTTGCTCGTCTAACAACCGGTGAAACATATCCCCCTAGGAAGCGCCTCTGTACTACTCCGAAGAGTGGTACGATACCGTCGAAGAGGTCTCCCACTGTGGTGGATGTTCCAAGCAGCAGTTGTGACTCTGACAAGTCCCAAGAGGAAGAGGAAGACTCCGAACCTGAGATGGCCCAAGATGAAGAGACAAGGCCCGAGTCTGAGATGCCCCAAGATGAAGAAGAAATTACTGTGTATAGCCCCGATTCCACTGATGAAGAGGAGTCTGAGAAGTCCCAAGATGAAGAGGCTAGCTCTGAGTCTGAGATGCTGCCTCAAGAGGAAGAGGAAGACTCCGAACCTGCGAAGTCCCAAGATGAAGAGACAAGGTCCGAGTCTGAGATGCCCCAAGATGAAGAGGCAACTGCTCTGAATGGCGCTGATAACCCTGCTCTGGTGGACCGGAATGAGGCCAATGGTAGGGAAGTCTCAAGGGAGGAGTACGATCAAGCTTTGAAGGAGAGAGATATGGCCTTGAACGAGCTGAATAACTTGAGAGCAGAGCTAAAGGAGGTCCACAATGACAGGTCTAGGGCTCTGGCTGAGTTCGAGTTAGGCAAGAAGGTGTTGGAGGCTGAGAAGAAAGCATTGACTGAGAGACTCGATAAGGAGTTTAGTAACTTTGCAGCAGAGCTAAAGGATGTTCTGGAAAGCTTGTCCAAGAGCAAGGCTGAGTTGGAACAGACTTCCCGGGAACGGGATGGCTACCGAAACAGCTTGGAATTAGGGAAGAAGGGGTGGGAGGATGAAAAGAAAGCTTTGACTGAGAGACTTAATAAGGACTTTAATAACTTTGGAGCAGAGCTAAAGGAGGTCCTGAAAAACTTGTCTAAGAGCGAAGCTGAGTTGGAGAAGACTTCCCAAGAACGGGATACCTACCGAAGCAGCTTGGAATTAGGGAACAAGGTCTGGGAGGCTGAGAGGATTGAAATGGCAGAGAGGATAGCAACAGCGAACAAGGAAAAGGAAAACGCCTTGGAATTGAGGAAAAAGGTAGCTGAGGCTGAGAGGATAGAAATGGCGGAGAGCACAGCAATGGTGAACAAGGAAAAAGAAAAGGATTATTGCAAAGGATACCCAGATGGGTGGCTCAAGAAGCCTCATGCTTATGTCCACGCATGGCATGATGCCAGATTGGCCAATGTGGTTACTGATCTTCCTGTGTTGCAGATGATGAACAACCTGCCAAAATCACATGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

419

Amino Acids

47.81

Weight (kDa)

4.65

Isoelectric Point (pI)

63.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 367, 1248
AciI CCGC 1 cut(s) 1079
AcoI YGGCCR 1 cut(s) 1194
AfaI GTAC 4 cut(s) 10, 70, 88, 500
AfiI CCNNNNNNNGG 8 cut(s) 83, 451, 466, 477, 753, 754, 924, 925
AflIII ACRYGT 1 cut(s) 1252
AgeI ACCGGT 1 cut(s) 35
AgsI TTSAA 3 cut(s) 514, 535, 986
AjnI CCWGG 1 cut(s) 11
AleI CACNNNNGTG 1 cut(s) 116
Alw21I GWGCWC 1 cut(s) 1088
Alw26I GTCTC 6 cut(s) 111, 197, 374, 490, 649, 820
Ama87I CYCGRG 2 cut(s) 212, 747
AoxI GGCC 5 cut(s) 189, 209, 468, 528, 1194
ApeKI GCWGC 4 cut(s) 132, 328, 683, 942
AsiGI ACCGGT 1 cut(s) 35
AspA2I CCTAGG 1 cut(s) 53
AspLEI GCGC 2 cut(s) 63, 437
AspS9I GGNCC 6 cut(s) 190, 210, 387, 457, 571, 871
AsuC2I CCSGG 2 cut(s) 748, 749
AsuHPI GGTGA 2 cut(s) 50, 1108
AsuNHI GCTAGC 1 cut(s) 308
AvaI CYCGRG 2 cut(s) 212, 747
AvaII GGWCC 4 cut(s) 387, 457, 571, 871
AvrII CCTAGG 1 cut(s) 53
BalI TGGCCA 1 cut(s) 1196
BanII GRGCYC 1 cut(s) 595
BbsI GAAGAC 3 cut(s) 177, 354, 917
Bbv12I GWGCWC 1 cut(s) 1088
BbvCI CCTCAGC 1 cut(s) 1056
BbvI GCAGC 4 cut(s) 144, 315, 695, 954
BccI CCATC 3 cut(s) 181, 752, 1133
BciT130I CCWGG 1 cut(s) 13
BciVI GTATCC 2 cut(s) 922, 1124
BcnI CCSGG 2 cut(s) 748, 749
BcoDI GTCTC 6 cut(s) 111, 197, 374, 490, 649, 820
BfaI CTAG 4 cut(s) 54, 309, 588, 1258
BfoI RGCGCY 2 cut(s) 64, 438
BfuAI ACCTGC 2 cut(s) 367, 1248
BfuI GTATCC 2 cut(s) 922, 1124
BglI GCCNNNNNGGC 1 cut(s) 1193
BisI GCNGC 4 cut(s) 133, 329, 684, 943
BlnI CCTAGG 1 cut(s) 53
BlsI GCNGC 4 cut(s) 134, 330, 685, 944
Bme1390I CCNGG 3 cut(s) 13, 748, 749
Bme18I GGWCC 4 cut(s) 387, 457, 571, 871
BmeT110I CYCGRG 2 cut(s) 212, 747
BmgT120I GGNCC 6 cut(s) 190, 210, 387, 457, 571, 871
BmrFI CCNGG 3 cut(s) 13, 748, 749
BmsI GCATC 4 cut(s) 213, 315, 390, 1174
BmtI GCTAGC 1 cut(s) 312
BpiI GAAGAC 3 cut(s) 177, 354, 917
BplI GAGNNNNNCTC 6 cut(s) 158, 190, 296, 328, 335, 367
Bpu10I CCTNAGC 1 cut(s) 1056
BpuEI CTTGAG 4 cut(s) 318, 472, 571, 1133
BpuMI CCSGG 2 cut(s) 748, 749
BsaI GGTCTC 1 cut(s) 111
BsaJI CCNNGG 4 cut(s) 12, 53, 747, 1032
BsaWI WCCGGW 2 cut(s) 35, 459
Bsc4I CCNNNNNNNGG 8 cut(s) 83, 451, 466, 477, 753, 754, 924, 925
Bse118I RCCGGY 1 cut(s) 35
Bse3DI GCAATG 1 cut(s) 1098
BseBI CCWGG 1 cut(s) 13
BseDI CCNNGG 4 cut(s) 12, 53, 747, 1032
BseGI GGATG 4 cut(s) 127, 703, 763, 808
BseLI CCNNNNNNNGG 8 cut(s) 83, 451, 466, 477, 753, 754, 924, 925
BseMI GCAATG 1 cut(s) 1098
BseRI GAGGAG 2 cut(s) 293, 509
BseXI GCAGC 4 cut(s) 144, 315, 695, 954
BshFI GGCC 5 cut(s) 191, 211, 470, 530, 1196
BshTI ACCGGT 1 cut(s) 35
BsiHKAI GWGCWC 1 cut(s) 1088
BsiHKCI CYCGRG 2 cut(s) 212, 747
BsiSI CCGG 3 cut(s) 36, 460, 748
BslFI GGGAC 3 cut(s) 139, 277, 352
BslI CCNNNNNNNGG 8 cut(s) 83, 451, 466, 477, 753, 754, 924, 925
BsmAI GTCTC 6 cut(s) 111, 197, 374, 490, 649, 820
BsmFI GGGAC 3 cut(s) 139, 277, 352
BsnI GGCC 5 cut(s) 191, 211, 470, 530, 1196
Bso31I GGTCTC 1 cut(s) 111
BsoBI CYCGRG 2 cut(s) 212, 747
Bsp1286I GDGCHC 2 cut(s) 595, 1088
Bsp143I GATC 2 cut(s) 502, 1210
BspACI CCGC 1 cut(s) 1079
BspANI GGCC 5 cut(s) 191, 211, 470, 530, 1196
BspMI ACCTGC 2 cut(s) 367, 1248
BspOI GCTAGC 1 cut(s) 312
BspTNI GGTCTC 1 cut(s) 111
BsrDI GCAATG 1 cut(s) 1098
BsrFI RCCGGY 1 cut(s) 35
BssAI RCCGGY 1 cut(s) 35
BssECI CCNNGG 4 cut(s) 12, 53, 747, 1032
BssMI GATC 2 cut(s) 502, 1210
BssT1I CCWWGG 2 cut(s) 53, 1032
Bst2UI CCWGG 1 cut(s) 13
Bst4CI ACNGT 3 cut(s) 96, 115, 250
Bst6I CTCTTC 9 cut(s) 74, 95, 159, 195, 270, 297, 336, 372, 408
BstC8I GCNNGC 1 cut(s) 310
BstF5I GGATG 4 cut(s) 127, 703, 763, 808
BstH2I RGCGCY 2 cut(s) 64, 438
BstHHI GCGC 2 cut(s) 63, 437
BstKTI GATC 2 cut(s) 505, 1213
BstMAI GTCTC 6 cut(s) 111, 197, 374, 490, 649, 820
BstMBI GATC 2 cut(s) 502, 1210
BstMWI GCNNNNNNNGC 2 cut(s) 1153, 1193
BstNI CCWGG 1 cut(s) 13
BstNSI RCATGY 1 cut(s) 1256
BstSCI CCNGG 3 cut(s) 11, 746, 747
BstV1I GCAGC 4 cut(s) 144, 315, 695, 954
BstV2I GAAGAC 3 cut(s) 177, 354, 917
BstXI CCANNNNNNTGG 2 cut(s) 118, 1143
BsuI GTATCC 2 cut(s) 922, 1124
BsuRI GGCC 5 cut(s) 191, 211, 470, 530, 1196
BtsCI GGATG 4 cut(s) 127, 703, 763, 808
BtsIMutI CAGTG 2 cut(s) 111, 267
BveI ACCTGC 2 cut(s) 367, 1248
Cac8I GCNNGC 1 cut(s) 310
CfoI GCGC 2 cut(s) 63, 437
Cfr10I RCCGGY 1 cut(s) 35
Cfr13I GGNCC 6 cut(s) 190, 210, 387, 457, 571, 871
Cfr9I CCCGGG 1 cut(s) 747
Csp6I GTAC 4 cut(s) 9, 69, 87, 499
CspAI ACCGGT 1 cut(s) 35
CviAII CATG 4 cut(s) 1160, 1176, 1181, 1253
CviQI GTAC 4 cut(s) 9, 69, 87, 499
DpnI GATC 2 cut(s) 504, 1212
DpnII GATC 2 cut(s) 502, 1210
EaeI YGGCCR 1 cut(s) 1194
Eam1104I CTCTTC 9 cut(s) 74, 95, 159, 195, 270, 297, 336, 372, 408
EarI CTCTTC 9 cut(s) 74, 95, 159, 195, 270, 297, 336, 372, 408
EciI GGCGGA 1 cut(s) 1094
Eco130I CCWWGG 2 cut(s) 53, 1032
Eco24I GRGCYC 1 cut(s) 595
Eco31I GGTCTC 1 cut(s) 111
Eco47I GGWCC 4 cut(s) 387, 457, 571, 871
Eco88I CYCGRG 2 cut(s) 212, 747
EcoO109I RGGNCCY 1 cut(s) 871
EcoRII CCWGG 1 cut(s) 11
EcoT14I CCWWGG 2 cut(s) 53, 1032
EcoT38I GRGCYC 1 cut(s) 595
ErhI CCWWGG 2 cut(s) 53, 1032
FaeI CATG 4 cut(s) 1163, 1179, 1184, 1256
FaiI YATR 8 cut(s) 46, 255, 527, 1161, 1167, 1177, 1182, 1254
FaqI GGGAC 3 cut(s) 139, 277, 352
FatI CATG 4 cut(s) 1159, 1175, 1180, 1252
Fnu4HI GCNGC 4 cut(s) 133, 329, 684, 943
FokI GGATG 4 cut(s) 134, 710, 770, 815
FriOI GRGCYC 1 cut(s) 595
Fsp4HI GCNGC 4 cut(s) 133, 329, 684, 943
FspBI CTAG 4 cut(s) 54, 309, 588, 1258
GlaI GCGC 2 cut(s) 62, 436
GluI GCNGC 4 cut(s) 133, 329, 684, 943
HaeII RGCGCY 2 cut(s) 64, 438
HaeIII GGCC 5 cut(s) 191, 211, 470, 530, 1196
HapII CCGG 3 cut(s) 36, 460, 748
HhaI GCGC 2 cut(s) 63, 437
Hin1II CATG 4 cut(s) 1163, 1179, 1184, 1256
Hin6I GCGC 2 cut(s) 61, 435
HinP1I GCGC 2 cut(s) 61, 435
HindIII AAGCTT 3 cut(s) 507, 709, 813
HinfI GANTC 9 cut(s) 143, 173, 215, 263, 281, 317, 350, 392, 657
HpaII CCGG 3 cut(s) 36, 460, 748
HphI GGTGA 2 cut(s) 50, 1108
Hpy166II GTNNAC 4 cut(s) 457, 574, 1099, 1171
Hpy188III TCNNGA 4 cut(s) 335, 704, 874, 1150
Hpy8I GTNNAC 4 cut(s) 457, 574, 1099, 1171
Hpy99I CGWCG 1 cut(s) 100
HpyAV CCTTC 3 cut(s) 508, 613, 784
HpyCH4III ACNGT 3 cut(s) 96, 115, 250
HpyCH4V TGCA 3 cut(s) 683, 1125, 1225
HpyF10VI GCNNNNNNNGC 2 cut(s) 1153, 1193
Hsp92II CATG 4 cut(s) 1163, 1179, 1184, 1256
HspAI GCGC 2 cut(s) 61, 435
Kzo9I GATC 2 cut(s) 502, 1210
LmnI GCTCC 1 cut(s) 854
Lsp1109I GCAGC 4 cut(s) 144, 315, 695, 954
LweI GCATC 4 cut(s) 213, 315, 390, 1174
MaeI CTAG 4 cut(s) 54, 309, 588, 1258
MaeIII GTNAC 3 cut(s) 140, 674, 1204
MalI GATC 2 cut(s) 504, 1212
MboI GATC 2 cut(s) 502, 1210
MhlI GDGCHC 2 cut(s) 595, 1088
MlsI TGGCCA 1 cut(s) 1196
MluCI AATT 4 cut(s) 243, 779, 950, 1037
MluNI TGGCCA 1 cut(s) 1196
MlyI GAGTC 8 cut(s) 137, 167, 224, 290, 326, 344, 401, 651
MmeI TCCRAC 3 cut(s) 606, 714, 885
Mox20I TGGCCA 1 cut(s) 1196
MscI TGGCCA 1 cut(s) 1196
MseI TTAA 2 cut(s) 831, 843
MslI CAYNNNNRTG 3 cut(s) 116, 1091, 1164
Msp20I TGGCCA 1 cut(s) 1196
MspI CCGG 3 cut(s) 36, 460, 748
MspR9I CCNGG 3 cut(s) 13, 748, 749
MvaI CCWGG 1 cut(s) 13
MwoI GCNNNNNNNGC 2 cut(s) 1153, 1193
NciI CCSGG 2 cut(s) 748, 749
NdeII GATC 2 cut(s) 502, 1210
NheI GCTAGC 1 cut(s) 308
NlaIII CATG 4 cut(s) 1163, 1179, 1184, 1256
NmuCI GTSAC 1 cut(s) 140
NspI RCATGY 1 cut(s) 1256
OliI CACNNNNGTG 1 cut(s) 116
PciI ACATGT 1 cut(s) 1252
PcsI WCGNNNNNNNCGW 1 cut(s) 95
PfeI GAWTC 1 cut(s) 263
PflFI GACNNNGTC 1 cut(s) 385
PinAI ACCGGT 1 cut(s) 35
PkrI GCNGC 4 cut(s) 134, 330, 685, 944
PleI GAGTC 8 cut(s) 137, 167, 223, 289, 325, 344, 400, 651
PpsI GAGTC 8 cut(s) 137, 167, 223, 289, 325, 344, 400, 651
PpuMI RGGWCCY 1 cut(s) 871
PscI ACATGT 1 cut(s) 1252
Psp5II RGGWCCY 1 cut(s) 871
Psp6I CCWGG 1 cut(s) 11
PspGI CCWGG 1 cut(s) 11
PspPI GGNCC 6 cut(s) 190, 210, 387, 457, 571, 871
PspPPI RGGWCCY 1 cut(s) 871
PsyI GACNNNGTC 1 cut(s) 385
RsaI GTAC 4 cut(s) 10, 70, 88, 500
RsaNI GTAC 4 cut(s) 9, 69, 87, 499
RseI CAYNNNNRTG 3 cut(s) 116, 1091, 1164
SaqAI TTAA 2 cut(s) 831, 843
SatI GCNGC 4 cut(s) 133, 329, 684, 943
Sau3AI GATC 2 cut(s) 502, 1210
Sau96I GGNCC 6 cut(s) 190, 210, 387, 457, 571, 871
SchI GAGTC 8 cut(s) 137, 167, 224, 290, 326, 344, 401, 651
ScrFI CCNGG 3 cut(s) 13, 748, 749
SduI GDGCHC 2 cut(s) 595, 1088
SfaNI GCATC 4 cut(s) 213, 315, 390, 1174
SinI GGWCC 4 cut(s) 387, 457, 571, 871
SmaI CCCGGG 1 cut(s) 749
SmiMI CAYNNNNRTG 3 cut(s) 116, 1091, 1164
SmlI CTYRAG 4 cut(s) 333, 487, 550, 1148
SmoI CTYRAG 4 cut(s) 333, 487, 550, 1148
Sse9I AATT 4 cut(s) 243, 779, 950, 1037
SsiI CCGC 1 cut(s) 1079
SspMI CTAG 4 cut(s) 54, 309, 588, 1258
StyD4I CCNGG 3 cut(s) 11, 746, 747
StyI CCWWGG 2 cut(s) 53, 1032
TaaI ACNGT 3 cut(s) 96, 115, 250
TaqI TCGA 3 cut(s) 98, 606, 660
TasI AATT 4 cut(s) 243, 779, 950, 1037
TatI WGTACW 1 cut(s) 68
TfiI GAWTC 1 cut(s) 263
Tru1I TTAA 2 cut(s) 831, 843
Tru9I TTAA 2 cut(s) 831, 843
TscAI CASTG 2 cut(s) 118, 274
TseFI GTSAC 1 cut(s) 140
TseI GCWGC 4 cut(s) 132, 328, 683, 942
Tsp45I GTSAC 1 cut(s) 140
TspDTI ATGAA 8 cut(s) 213, 249, 288, 315, 390, 426, 819, 1247
TspMI CCCGGG 1 cut(s) 747
TspRI CASTG 2 cut(s) 118, 274
Tth111I GACNNNGTC 1 cut(s) 385
VpaK11BI GGWCC 4 cut(s) 387, 457, 571, 871
XceI RCATGY 1 cut(s) 1256
XmaI CCCGGG 1 cut(s) 747
XmaJI CCTAGG 1 cut(s) 53
XspI CTAG 4 cut(s) 54, 309, 588, 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.