Rmu_sc0004688.1_g000024

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004688.1
OG0000075
Physical Location & Seq
Reverse (-)
63587 .. 68128
4542 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004688.1_g000024.1.cds

Sequence Viewer

Length: 2127 bp
atgcttcgacggaggcccggagcggttgtcggtttggctagcacgggtagttctgttctccatggtgctagtgatggttgtgacacgtgttcgtctggtagtgcagcagcggttacaacttctgagcagttacttaaatttgttggtaacttgtgcgctgatttgcgggagtctggctccgtttctttccgtgtggaacgttcaggatctcgatatcaccttgaggcatatgtataccaacaagtatcccaagtccccggtcaagagttctcttgggtagggagtttgtctttggtaaaattatcggaagttcaaggcgagttcatgccacgcggcttccgtacaaccattacccccaagtccctacttaagaggagtcttggctggggtgaggagatcgtattcgcgcttggcgttgtgtcgctatcgctaatctgtgtatggggcgggagtatccctgtcgcggtaaacgagagggttccaccagtggaggtgaaggattttcacgtggtggtgtcggtgcttcttgtggaggtggcgagggtgctccccgtgggggtgccgtgggcggttcccgaggaggtggtgagggttagtgtcgtggagttccgagtagggttgtgcaaactgtgggttccgatatgcctaaggtggagaatgttgaagtgttggagattctgcactcgccacgggggcggttactccttggcgatatgcccattgatcagcccggtcataccaccccgaggtggggtgggcatgcttttactagtaccagctcaagtgtgggttgacgttcccgatactagaagagcttcagtacctgctgtcgtgtctgaatatatcgttggggcagctatcgccaaaagcgttgaggtaattaatgggaagcgcgtgtcggcgcgattattgaggaccttccgtcaaatatttaccctcactagaggggcaagccttgcctggttaggggccgctggcagaatccagacatggtgcatcgggctcctactcgtttccagcctatctgaggctatcctgaccacgctagagcagaaacgtgtggcgagggtgttaggcgcgtttcccctggggacgagggggttctatcgcctgtgtaggcacccaatatacgagaagtttgaattggggaggcgtccggcggatatgccgaacaaggcccctagcaagagtgacgccccgtacgccgaggtcgatactaatgtcattatccaggggttgctgttagaatcggagacggcaaggcagtcccccagagtctctatgggaggggtggagcatggcttcttggaccggccatcagagcacgtggttgaagtggagatctccgtcaaggagttgtttgaggaagttgagcggcgccagagccataccagtgccaaggcccgcctggtacaggatgctgtgttagagcagttggacgctgtctttggtgaggatattagtggtccggtatcgagggaggtcattaccgttgatagcggagaagatgaggtgaccagccaggctgttggggatgcagttccgactgttgaggctcctgaagcgcaacaggaggtttgggagggtgatgttgggggtaccaaggttgccgagacggaggcccttgcccaagtagaagggacccgagtgtctgagaccagtgcacgcactgacggagctgggtcgaagaagagggtagcttcacaacttagtctcgggagtcccccagtgggtgttaatgtcgatacccgtggagggaagagggctcgagttgaagatgtgtcgcgttccagatctacaagcaagggttctcggggttctagcaatgaggttactgggggtctcgcacgcacccttgatgaaattgggatcacatatggagctattctgcacatggttgctaatttgagaaattgccatcaggaactcagccgtgtgaatgctgagaatctgcgccttaggtattgggaagcacatgagaggttaatgagagctatgaacatgaattattatgcctcggctgagttgcttgcgcattttgatcgggagataggccgcctgcaaggtgaactaaatgctgagagggaaagagcacacgagctccaggatgcactggatcgcagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

708

Amino Acids

77.14

Weight (kDa)

7.2

Isoelectric Point (pI)

43.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1648
Acc16I TGCGCA 1 cut(s) 2034
Acc36I ACCTGC 1 cut(s) 832
Acc65I GGTACC 1 cut(s) 1598
AccB1I GGYRCC 4 cut(s) 559, 1119, 1377, 1598
AccBSI CCGCTC 2 cut(s) 23, 1375
AccI GTMKAC 1 cut(s) 234
AccII CGCG 7 cut(s) 333, 407, 464, 894, 904, 1079, 1786
AclI AACGTT 1 cut(s) 199
AclWI GGATC 3 cut(s) 214, 1877, 2124
AcoI YGGCCR 1 cut(s) 1313
AcsI RAATTY 1 cut(s) 137
AcuI CTGAAG 2 cut(s) 801, 1581
AcvI CACGTG 3 cut(s) 87, 508, 1327
AcyI GRCGYC 3 cut(s) 1153, 1194, 1378
AdeI CACNNNGTG 1 cut(s) 511
AfaI GTAC 6 cut(s) 343, 774, 822, 1202, 1413, 1600
AflII CTTAAG 1 cut(s) 368
AflIII ACRYGT 3 cut(s) 84, 86, 1057
AgsI TTSAA 5 cut(s) 314, 664, 1142, 1334, 1775
AhdI GACNNNNNGTC 1 cut(s) 921
AhlI ACTAGT 1 cut(s) 769
AjnI CCWGG 6 cut(s) 959, 1086, 1230, 1407, 1521, 2103
AjuI GAANNNNNNNTTGG 4 cut(s) 831, 863, 1127, 1159
AluBI AGCT 9 cut(s) 779, 815, 857, 1679, 1700, 1883, 1994, 2101, 2124
AluI AGCT 9 cut(s) 779, 815, 857, 1679, 1700, 1883, 1994, 2101, 2124
Alw21I GWGCWC 5 cut(s) 549, 1326, 1666, 2095, 2103
Alw26I GTCTC 6 cut(s) 1247, 1282, 1607, 1649, 1718, 1847
Alw44I GTGCAC 1 cut(s) 1662
AlwI GGATC 3 cut(s) 214, 1877, 2124
AlwNI CAGNNNCTG 1 cut(s) 824
Ama87I CYCGRG 6 cut(s) 575, 744, 1644, 1715, 1767, 1812
AoxI GGCC 7 cut(s) 14, 969, 1176, 1313, 1401, 1620, 2053
ApaLI GTGCAC 1 cut(s) 1662
ApeKI GCWGC 4 cut(s) 104, 107, 854, 2121
ApoI RAATTY 1 cut(s) 137
ArsI GACNNNNNNTTYG 2 cut(s) 1430, 1462
AseI ATTAAT 1 cut(s) 882
Asp700I GAANNNNTTC 1 cut(s) 814
Asp718I GGTACC 1 cut(s) 1598
AspLEI GCGC 9 cut(s) 158, 409, 894, 904, 1079, 1380, 1567, 1956, 2035
AspS9I GGNCC 9 cut(s) 15, 915, 969, 1177, 1309, 1402, 1466, 1621, 1641
AsuC2I CCSGG 3 cut(s) 18, 258, 731
AsuHPI GGTGA 8 cut(s) 209, 401, 505, 598, 1463, 1525, 1598, 2078
AsuNHI GCTAGC 1 cut(s) 38
AvaI CYCGRG 6 cut(s) 575, 744, 1644, 1715, 1767, 1812
AvaII GGWCC 4 cut(s) 915, 1309, 1466, 1641
AxyI CCTNAGG 2 cut(s) 647, 1958
BaeGI GKGCMC 1 cut(s) 1666
BaeI ACNNNNGTAYC 4 cut(s) 1206, 1239, 1590, 1623
BanI GGYRCC 4 cut(s) 559, 1119, 1377, 1598
BanII GRGCYC 3 cut(s) 1005, 1768, 2103
BauI CACGAG 1 cut(s) 2096
BbrPI CACGTG 3 cut(s) 87, 508, 1327
Bbv12I GWGCWC 5 cut(s) 549, 1326, 1666, 2095, 2103
BbvI GCAGC 3 cut(s) 116, 119, 866
BccI CCATC 3 cut(s) 68, 1324, 1926
BceAI ACGGC 3 cut(s) 547, 1272, 1917
BcgI CGANNNNNNTGC 2 cut(s) 2024, 2058
BciT130I CCWGG 6 cut(s) 961, 1088, 1232, 1409, 1523, 2105
BciVI GTATCC 2 cut(s) 256, 464
BclI TGATCA 1 cut(s) 723
BcnI CCSGG 3 cut(s) 18, 258, 731
BcoDI GTCTC 6 cut(s) 1247, 1282, 1607, 1649, 1718, 1847
BcuI ACTAGT 1 cut(s) 769
BfaI CTAG 9 cut(s) 39, 69, 770, 807, 942, 1046, 1182, 1821, 2125
BfoI RGCGCY 1 cut(s) 1381
BfrI CTTAAG 1 cut(s) 368
BfuAI ACCTGC 1 cut(s) 832
BfuI GTATCC 2 cut(s) 256, 464
BglI GCCNNNNNGGC 1 cut(s) 693
BglII AGATCT 2 cut(s) 1341, 1793
BisI GCNGC 8 cut(s) 105, 108, 334, 855, 972, 1376, 2056, 2122
BlsI GCNGC 8 cut(s) 106, 109, 335, 856, 973, 1377, 2057, 2123
Bme1390I CCNGG 9 cut(s) 18, 258, 731, 961, 1088, 1232, 1409, 1523, 2105
Bme18I GGWCC 4 cut(s) 915, 1309, 1466, 1641
BmeRI GACNNNNNGTC 1 cut(s) 921
BmeT110I CYCGRG 6 cut(s) 575, 744, 1644, 1715, 1767, 1812
BmgT120I GGNCC 9 cut(s) 15, 915, 969, 1177, 1309, 1402, 1466, 1621, 1641
BmrFI CCNGG 9 cut(s) 18, 258, 731, 961, 1088, 1232, 1409, 1523, 2105
BmrI ACTGGG 2 cut(s) 1721, 1845
BmsI GCATC 4 cut(s) 1005, 1408, 1525, 2098
BmtI GCTAGC 1 cut(s) 42
BmuI ACTGGG 2 cut(s) 1721, 1845
BplI GAGNNNNNCTC 2 cut(s) 161, 193
BpmI CTGGAG 1 cut(s) 2087
BpuEI CTTGAG 2 cut(s) 242, 765
BpuMI CCSGG 3 cut(s) 18, 258, 731
BsaAI YACGTR 3 cut(s) 87, 508, 1327
BsaHI GRCGYC 3 cut(s) 1153, 1194, 1378
BsaI GGTCTC 2 cut(s) 1649, 1847
BsaWI WCCGGW 1 cut(s) 1468
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 2085, 2115
Bse118I RCCGGY 1 cut(s) 1311
Bse1I ACTGG 6 cut(s) 485, 1392, 1659, 1727, 1840, 2118
Bse21I CCTNAGG 2 cut(s) 647, 1958
Bse3DI GCAATG 1 cut(s) 1831
BseBI CCWGG 6 cut(s) 961, 1088, 1232, 1409, 1523, 2105
BseGI GGATG 3 cut(s) 1423, 1540, 2113
BseMI GCAATG 1 cut(s) 1831
BseMII CTCAG 7 cut(s) 114, 1017, 1644, 1935, 1942, 2013, 2070
BseNI ACTGG 6 cut(s) 485, 1392, 1659, 1727, 1840, 2118
BseRI GAGGAG 3 cut(s) 388, 407, 593
BseSI GKGCMC 1 cut(s) 1666
BseXI GCAGC 3 cut(s) 116, 119, 866
BseYI CCCAGC 2 cut(s) 384, 1679
BsgI GTGCAG 3 cut(s) 123, 664, 1874
Bsh1236I CGCG 7 cut(s) 333, 407, 464, 894, 904, 1079, 1786
BshFI GGCC 7 cut(s) 16, 971, 1178, 1315, 1403, 1622, 2055
BshNI GGYRCC 4 cut(s) 559, 1119, 1377, 1598
BsiHKAI GWGCWC 5 cut(s) 549, 1326, 1666, 2095, 2103
BsiHKCI CYCGRG 6 cut(s) 575, 744, 1644, 1715, 1767, 1812
BsiSI CCGG 6 cut(s) 18, 258, 731, 1157, 1312, 1469
BsiWI CGTACG 1 cut(s) 1200
BslFI GGGAC 6 cut(s) 239, 346, 1105, 1252, 1654, 1707
BsmAI GTCTC 6 cut(s) 1247, 1282, 1607, 1649, 1718, 1847
BsmBI CGTCTC 2 cut(s) 1247, 1607
BsmFI GGGAC 6 cut(s) 239, 346, 1105, 1252, 1654, 1707
BsmI GAATGC 1 cut(s) 1945
BsnI GGCC 7 cut(s) 16, 971, 1178, 1315, 1403, 1622, 2055
Bso31I GGTCTC 2 cut(s) 1649, 1847
BsoBI CYCGRG 6 cut(s) 575, 744, 1644, 1715, 1767, 1812
Bsp1286I GDGCHC 7 cut(s) 549, 1005, 1326, 1666, 1768, 2095, 2103
Bsp143I GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
Bsp19I CCATGG 1 cut(s) 61
BspANI GGCC 7 cut(s) 16, 971, 1178, 1315, 1403, 1622, 2055
BspCNI CTCAG 7 cut(s) 115, 1018, 1645, 1936, 1941, 2014, 2071
BspFNI CGCG 7 cut(s) 333, 407, 464, 894, 904, 1079, 1786
BspMI ACCTGC 1 cut(s) 832
BspOI GCTAGC 1 cut(s) 42
BspPI GGATC 3 cut(s) 214, 1877, 2124
BspQI GCTCTTC 1 cut(s) 805
BspT107I GGYRCC 4 cut(s) 559, 1119, 1377, 1598
BspTI CTTAAG 1 cut(s) 368
BspTNI GGTCTC 2 cut(s) 1649, 1847
BsrBI CCGCTC 2 cut(s) 23, 1375
BsrDI GCAATG 1 cut(s) 1831
BsrFI RCCGGY 1 cut(s) 1311
BsrI ACTGG 6 cut(s) 485, 1392, 1659, 1727, 1840, 2118
BssAI RCCGGY 1 cut(s) 1311
BssMI GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
BssNAI GTATAC 1 cut(s) 235
BssNI GRCGYC 3 cut(s) 1153, 1194, 1378
BssSI CACGAG 1 cut(s) 2096
BssT1I CCWWGG 4 cut(s) 61, 705, 1398, 1602
Bst1107I GTATAC 1 cut(s) 235
Bst2BI CACGAG 1 cut(s) 2096
Bst2UI CCWGG 6 cut(s) 961, 1088, 1232, 1409, 1523, 2105
Bst4CI ACNGT 3 cut(s) 630, 1492, 1549
Bst6I CTCTTC 3 cut(s) 805, 1685, 1754
BstACI GRCGYC 3 cut(s) 1153, 1194, 1378
BstAFI CTTAAG 1 cut(s) 368
BstAPI GCANNNNNTGC 1 cut(s) 956
BstBAI YACGTR 3 cut(s) 87, 508, 1327
BstC8I GCNNGC 9 cut(s) 40, 761, 952, 976, 1405, 1666, 1849, 2031, 2060
BstDSI CCRYGG 5 cut(s) 61, 552, 563, 688, 1750
BstEII GGTNACC 1 cut(s) 1513
BstENI CCTNNNNNAGG 2 cut(s) 1025, 1412
BstF5I GGATG 3 cut(s) 1423, 1540, 2113
BstFNI CGCG 7 cut(s) 333, 407, 464, 894, 904, 1079, 1786
BstH2I RGCGCY 1 cut(s) 1381
BstHHI GCGC 9 cut(s) 158, 409, 894, 904, 1079, 1380, 1567, 1956, 2035
BstKTI GATC 8 cut(s) 209, 399, 726, 1344, 1796, 1872, 2044, 2119
BstMAI GTCTC 6 cut(s) 1247, 1282, 1607, 1649, 1718, 1847
BstMBI GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
BstMWI GCNNNNNNNGC 6 cut(s) 693, 860, 956, 1202, 1321, 1562
BstNI CCWGG 6 cut(s) 961, 1088, 1232, 1409, 1523, 2105
BstNSI RCATGY 1 cut(s) 763
BstPI GGTNACC 1 cut(s) 1513
BstSCI CCNGG 9 cut(s) 16, 256, 729, 959, 1086, 1230, 1407, 1521, 2103
BstSLI GKGCMC 1 cut(s) 1666
BstUI CGCG 7 cut(s) 333, 407, 464, 894, 904, 1079, 1786
BstV1I GCAGC 3 cut(s) 116, 119, 866
BstX2I RGATCY 3 cut(s) 206, 1341, 1793
BstXI CCANNNNNNTGG 1 cut(s) 1529
BstYI RGATCY 3 cut(s) 206, 1341, 1793
BstZ17I GTATAC 1 cut(s) 235
Bsu36I CCTNAGG 2 cut(s) 647, 1958
BsuI GTATCC 2 cut(s) 256, 464
BsuRI GGCC 7 cut(s) 16, 971, 1178, 1315, 1403, 1622, 2055
BtgI CCRYGG 5 cut(s) 61, 552, 563, 688, 1750
BtsCI GGATG 3 cut(s) 1423, 1540, 2113
BtsIMutI CAGTG 6 cut(s) 492, 1399, 1666, 1668, 1734, 2111
BveI ACCTGC 1 cut(s) 832
Cac8I GCNNGC 9 cut(s) 40, 761, 952, 976, 1405, 1666, 1849, 2031, 2060
CaiI CAGNNNCTG 1 cut(s) 824
CfoI GCGC 9 cut(s) 158, 409, 894, 904, 1079, 1380, 1567, 1956, 2035
Cfr10I RCCGGY 1 cut(s) 1311
Cfr13I GGNCC 9 cut(s) 15, 915, 969, 1177, 1309, 1402, 1466, 1621, 1641
CseI GACGC 3 cut(s) 1142, 1202, 1448
Csp6I GTAC 6 cut(s) 342, 773, 821, 1201, 1412, 1599
CviAII CATG 8 cut(s) 62, 325, 760, 990, 1298, 1894, 1976, 2002
CviQI GTAC 6 cut(s) 342, 773, 821, 1201, 1412, 1599
DinI GGCGCC 1 cut(s) 1379
DpnI GATC 8 cut(s) 208, 398, 725, 1343, 1795, 1871, 2043, 2118
DpnII GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
DraIII CACNNNGTG 1 cut(s) 511
DrdI GACNNNNNNGTC 1 cut(s) 1648
DriI GACNNNNNGTC 1 cut(s) 921
DseDI GACNNNNNNGTC 1 cut(s) 1648
EaeI YGGCCR 1 cut(s) 1313
Eam1104I CTCTTC 3 cut(s) 805, 1685, 1754
Eam1105I GACNNNNNGTC 1 cut(s) 921
EarI CTCTTC 3 cut(s) 805, 1685, 1754
EciI GGCGGA 1 cut(s) 1175
Ecl136II GAGCTC 1 cut(s) 2101
Eco130I CCWWGG 4 cut(s) 61, 705, 1398, 1602
Eco24I GRGCYC 3 cut(s) 1005, 1768, 2103
Eco31I GGTCTC 2 cut(s) 1649, 1847
Eco32I GATATC 1 cut(s) 215
Eco47I GGWCC 4 cut(s) 915, 1309, 1466, 1641
Eco53kI GAGCTC 1 cut(s) 2101
Eco57I CTGAAG 2 cut(s) 801, 1581
Eco72I CACGTG 3 cut(s) 87, 508, 1327
Eco81I CCTNAGG 2 cut(s) 647, 1958
Eco88I CYCGRG 6 cut(s) 575, 744, 1644, 1715, 1767, 1812
Eco91I GGTNACC 1 cut(s) 1513
EcoICRI GAGCTC 1 cut(s) 2101
EcoNI CCTNNNNNAGG 2 cut(s) 1025, 1412
EcoO109I RGGNCCY 4 cut(s) 915, 1177, 1621, 1641
EcoO65I GGTNACC 1 cut(s) 1513
EcoRII CCWGG 6 cut(s) 959, 1086, 1230, 1407, 1521, 2103
EcoRV GATATC 1 cut(s) 215
EcoT14I CCWWGG 4 cut(s) 61, 705, 1398, 1602
EcoT38I GRGCYC 3 cut(s) 1005, 1768, 2103
EgeI GGCGCC 1 cut(s) 1379
EheI GGCGCC 1 cut(s) 1379
ErhI CCWWGG 4 cut(s) 61, 705, 1398, 1602
Esp3I CGTCTC 2 cut(s) 1247, 1607
FaeI CATG 8 cut(s) 65, 328, 763, 993, 1301, 1897, 1979, 2005
FaqI GGGAC 6 cut(s) 239, 346, 1105, 1252, 1654, 1707
FatI CATG 8 cut(s) 61, 324, 759, 989, 1297, 1893, 1975, 2001
FauI CCCGC 3 cut(s) 159, 440, 1412
FauNDI CATATG 2 cut(s) 229, 1876
FbaI TGATCA 1 cut(s) 723
FblI GTMKAC 1 cut(s) 234
Fnu4HI GCNGC 8 cut(s) 105, 108, 334, 855, 972, 1376, 2056, 2122
FokI GGATG 3 cut(s) 1430, 1547, 2120
FriOI GRGCYC 3 cut(s) 1005, 1768, 2103
Fsp4HI GCNGC 8 cut(s) 105, 108, 334, 855, 972, 1376, 2056, 2122
FspBI CTAG 9 cut(s) 39, 69, 770, 807, 942, 1046, 1182, 1821, 2125
FspI TGCGCA 1 cut(s) 2034
GlaI GCGC 9 cut(s) 157, 408, 893, 903, 1078, 1379, 1566, 1955, 2034
GluI GCNGC 8 cut(s) 105, 108, 334, 855, 972, 1376, 2056, 2122
GsaI CCCAGC 2 cut(s) 388, 1683
GsuI CTGGAG 1 cut(s) 2087
HaeII RGCGCY 1 cut(s) 1381
HaeIII GGCC 7 cut(s) 16, 971, 1178, 1315, 1403, 1622, 2055
HapII CCGG 6 cut(s) 18, 258, 731, 1157, 1312, 1469
HgaI GACGC 3 cut(s) 1142, 1202, 1448
HhaI GCGC 9 cut(s) 158, 409, 894, 904, 1079, 1380, 1567, 1956, 2035
Hin1I GRCGYC 3 cut(s) 1153, 1194, 1378
Hin1II CATG 8 cut(s) 65, 328, 763, 993, 1301, 1897, 1979, 2005
Hin6I GCGC 9 cut(s) 156, 407, 892, 902, 1077, 1378, 1565, 1954, 2033
HinP1I GCGC 9 cut(s) 156, 407, 892, 902, 1077, 1378, 1565, 1954, 2033
HincII GTYRAC 1 cut(s) 793
HindII GTYRAC 1 cut(s) 793
HinfI GANTC 8 cut(s) 170, 376, 675, 981, 1247, 1275, 1720, 1948
HpaII CCGG 6 cut(s) 18, 258, 731, 1157, 1312, 1469
HphI GGTGA 8 cut(s) 209, 401, 505, 598, 1463, 1525, 1598, 2078
Hpy166II GTNNAC 5 cut(s) 235, 469, 793, 1664, 2069
Hpy8I GTNNAC 5 cut(s) 235, 469, 793, 1664, 2069
Hpy99I CGWCG 1 cut(s) 12
HpyAV CCTTC 3 cut(s) 490, 928, 1631
HpyCH4III ACNGT 3 cut(s) 630, 1492, 1549
HpyCH4IV ACGT 6 cut(s) 86, 199, 507, 795, 1057, 1326
HpyCH4V TGCA 9 cut(s) 104, 624, 681, 996, 1538, 1664, 1891, 2062, 2111
HpyF10VI GCNNNNNNNGC 6 cut(s) 693, 860, 956, 1202, 1321, 1562
HpySE526I ACGT 6 cut(s) 86, 199, 507, 795, 1057, 1326
Hsp92I GRCGYC 3 cut(s) 1153, 1194, 1378
Hsp92II CATG 8 cut(s) 65, 328, 763, 993, 1301, 1897, 1979, 2005
HspAI GCGC 9 cut(s) 156, 407, 892, 902, 1077, 1378, 1565, 1954, 2033
KasI GGCGCC 1 cut(s) 1377
KflI GGGWCCC 1 cut(s) 1641
KpnI GGTACC 1 cut(s) 1602
Ksp22I TGATCA 1 cut(s) 723
Kzo9I GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
LguI GCTCTTC 1 cut(s) 805
LmnI GCTCC 9 cut(s) 20, 182, 552, 1008, 1294, 1561, 1676, 1880, 2106
Lsp1109I GCAGC 3 cut(s) 116, 119, 866
LweI GCATC 4 cut(s) 1005, 1408, 1525, 2098
MaeI CTAG 9 cut(s) 39, 69, 770, 807, 942, 1046, 1182, 1821, 2125
MaeII ACGT 6 cut(s) 86, 199, 507, 795, 1057, 1326
MaeIII GTNAC 8 cut(s) 80, 112, 129, 146, 698, 1190, 1513, 1831
MalI GATC 8 cut(s) 208, 398, 725, 1343, 1795, 1871, 2043, 2118
MbiI CCGCTC 2 cut(s) 23, 1375
MboI GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
MboII GAAGA 6 cut(s) 822, 1517, 1699, 1702, 1771, 1787
MflI RGATCY 3 cut(s) 206, 1341, 1793
MhlI GDGCHC 7 cut(s) 549, 1005, 1326, 1666, 1768, 2095, 2103
MluCI AATT 8 cut(s) 137, 299, 879, 1142, 1863, 1903, 1912, 2005
Mly113I GGCGCC 1 cut(s) 1378
MlyI GAGTC 4 cut(s) 179, 385, 1284, 1729
MmeI TCCRAC 3 cut(s) 650, 1416, 1568
MroXI GAANNNNTTC 1 cut(s) 814
MseI TTAA 5 cut(s) 135, 369, 882, 1737, 1985
MslI CAYNNNNRTG 1 cut(s) 1392
MspA1I CMGCKG 2 cut(s) 110, 974
MspCI CTTAAG 1 cut(s) 368
MspI CCGG 6 cut(s) 18, 258, 731, 1157, 1312, 1469
MspR9I CCNGG 9 cut(s) 18, 258, 731, 961, 1088, 1232, 1409, 1523, 2105
Mva1269I GAATGC 1 cut(s) 1945
MvaI CCWGG 6 cut(s) 961, 1088, 1232, 1409, 1523, 2105
MvnI CGCG 7 cut(s) 333, 407, 464, 894, 904, 1079, 1786
MwoI GCNNNNNNNGC 6 cut(s) 693, 860, 956, 1202, 1321, 1562
NarI GGCGCC 1 cut(s) 1378
NciI CCSGG 3 cut(s) 18, 258, 731
NcoI CCATGG 1 cut(s) 61
NdeI CATATG 2 cut(s) 229, 1876
NdeII GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
NheI GCTAGC 1 cut(s) 38
NlaIII CATG 8 cut(s) 65, 328, 763, 993, 1301, 1897, 1979, 2005
NmeAIII GCCGAG 3 cut(s) 1231, 1636, 1997
NmuCI GTSAC 3 cut(s) 80, 1190, 1513
NsbI TGCGCA 1 cut(s) 2034
NspI RCATGY 1 cut(s) 763
PaeI GCATGC 1 cut(s) 763
PaeR7I CTCGAG 1 cut(s) 1767
PasI CCCWGGG 1 cut(s) 1087
PciSI GCTCTTC 1 cut(s) 805
PcsI WCGNNNNNNNCGW 5 cut(s) 337, 411, 468, 867, 1209
PctI GAATGC 1 cut(s) 1945
PdmI GAANNNNTTC 1 cut(s) 814
PfeI GAWTC 4 cut(s) 675, 981, 1247, 1948
Pfl23II CGTACG 1 cut(s) 1200
PflFI GACNNNGTC 1 cut(s) 1442
PfoI TCCNGGA 1 cut(s) 2103
PkrI GCNGC 8 cut(s) 106, 109, 335, 856, 973, 1377, 2057, 2123
PleI GAGTC 4 cut(s) 178, 384, 1283, 1728
PluTI GGCGCC 1 cut(s) 1381
PmaCI CACGTG 3 cut(s) 87, 508, 1327
PmlI CACGTG 3 cut(s) 87, 508, 1327
PpsI GAGTC 4 cut(s) 178, 384, 1283, 1728
Ppu21I YACGTR 3 cut(s) 87, 508, 1327
PpuMI RGGWCCY 2 cut(s) 915, 1641
PshBI ATTAAT 1 cut(s) 882
Psp124BI GAGCTC 1 cut(s) 2103
Psp1406I AACGTT 1 cut(s) 199
Psp5II RGGWCCY 2 cut(s) 915, 1641
Psp6I CCWGG 6 cut(s) 959, 1086, 1230, 1407, 1521, 2103
PspCI CACGTG 3 cut(s) 87, 508, 1327
PspEI GGTNACC 1 cut(s) 1513
PspFI CCCAGC 2 cut(s) 384, 1679
PspGI CCWGG 6 cut(s) 959, 1086, 1230, 1407, 1521, 2103
PspLI CGTACG 1 cut(s) 1200
PspPI GGNCC 9 cut(s) 15, 915, 969, 1177, 1309, 1402, 1466, 1621, 1641
PspPPI RGGWCCY 2 cut(s) 915, 1641
PspXI VCTCGAGB 1 cut(s) 1767
PstNI CAGNNNCTG 1 cut(s) 824
PsuI RGATCY 3 cut(s) 206, 1341, 1793
PsyI GACNNNGTC 1 cut(s) 1442
RsaI GTAC 6 cut(s) 343, 774, 822, 1202, 1413, 1600
RsaNI GTAC 6 cut(s) 342, 773, 821, 1201, 1412, 1599
RseI CAYNNNNRTG 1 cut(s) 1392
SacI GAGCTC 1 cut(s) 2103
SapI GCTCTTC 1 cut(s) 805
SaqAI TTAA 5 cut(s) 135, 369, 882, 1737, 1985
SatI GCNGC 8 cut(s) 105, 108, 334, 855, 972, 1376, 2056, 2122
Sau3AI GATC 8 cut(s) 206, 396, 723, 1341, 1793, 1869, 2041, 2116
Sau96I GGNCC 9 cut(s) 15, 915, 969, 1177, 1309, 1402, 1466, 1621, 1641
SchI GAGTC 4 cut(s) 179, 385, 1284, 1729
ScrFI CCNGG 9 cut(s) 18, 258, 731, 961, 1088, 1232, 1409, 1523, 2105
SduI GDGCHC 7 cut(s) 549, 1005, 1326, 1666, 1768, 2095, 2103
SfaNI GCATC 4 cut(s) 1005, 1408, 1525, 2098
SfoI GGCGCC 1 cut(s) 1379
Sfr274I CTCGAG 1 cut(s) 1767
SinI GGWCC 4 cut(s) 915, 1309, 1466, 1641
SlaI CTCGAG 1 cut(s) 1767
SmiMI CAYNNNNRTG 1 cut(s) 1392
SmlI CTYRAG 4 cut(s) 221, 368, 780, 1767
SmoI CTYRAG 4 cut(s) 221, 368, 780, 1767
SpeI ACTAGT 1 cut(s) 769
SphI GCATGC 1 cut(s) 763
Sse9I AATT 8 cut(s) 137, 299, 879, 1142, 1863, 1903, 1912, 2005
SspDI GGCGCC 1 cut(s) 1377
SspI AATATT 1 cut(s) 930
SspMI CTAG 9 cut(s) 39, 69, 770, 807, 942, 1046, 1182, 1821, 2125
SstI GAGCTC 1 cut(s) 2103
StyD4I CCNGG 9 cut(s) 16, 256, 729, 959, 1086, 1230, 1407, 1521, 2103
StyI CCWWGG 4 cut(s) 61, 705, 1398, 1602
TaaI ACNGT 3 cut(s) 630, 1492, 1549
TaiI ACGT 6 cut(s) 89, 202, 510, 798, 1060, 1329
TaqI TCGA 7 cut(s) 7, 211, 1212, 1475, 1685, 1743, 1768
TasI AATT 8 cut(s) 137, 299, 879, 1142, 1863, 1903, 1912, 2005
TauI GCSGC 4 cut(s) 336, 974, 1378, 2058
TfiI GAWTC 4 cut(s) 675, 981, 1247, 1948
Tru1I TTAA 5 cut(s) 135, 369, 882, 1737, 1985
Tru9I TTAA 5 cut(s) 135, 369, 882, 1737, 1985
TscAI CASTG 6 cut(s) 492, 1399, 1666, 1675, 1734, 2118
TseFI GTSAC 3 cut(s) 80, 1190, 1513
TseI GCWGC 4 cut(s) 104, 107, 854, 2121
Tsp45I GTSAC 3 cut(s) 80, 1190, 1513
TspDTI ATGAA 4 cut(s) 313, 1875, 2012, 2018
TspGWI ACGGA 8 cut(s) 25, 169, 179, 329, 911, 1336, 1631, 1689
TspRI CASTG 6 cut(s) 492, 1399, 1666, 1675, 1734, 2118
Tth111I GACNNNGTC 1 cut(s) 1442
Vha464I CTTAAG 1 cut(s) 368
VneI GTGCAC 1 cut(s) 1662
VpaK11BI GGWCC 4 cut(s) 915, 1309, 1466, 1641
VspI ATTAAT 1 cut(s) 882
XagI CCTNNNNNAGG 2 cut(s) 1025, 1412
XapI RAATTY 1 cut(s) 137
XceI RCATGY 1 cut(s) 763
XcmI CCANNNNNNNNNTGG 3 cut(s) 783, 1279, 1405
XhoI CTCGAG 1 cut(s) 1767
XmiI GTMKAC 1 cut(s) 234
XmnI GAANNNNTTC 1 cut(s) 814
XspI CTAG 9 cut(s) 39, 69, 770, 807, 942, 1046, 1182, 1821, 2125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.