Rmu_sc0002371.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002371.1
OG0000075
Physical Location & Seq
Forward (+)
3437 .. 5406
1970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002371.1_g000002.1.cds

Sequence Viewer

Length: 924 bp
atgcaatactcgacgaaggctggagatagcgggtgcgttaattttagggcacgtggcctcgcgattatcaaggacctttcatcaaacatttatgctcactggccggaggatatggctagcgaggctgctagcaagagtgatggtcccatacgcggaagtggataccgatgttatcatcaaggagttgttgcgagaatcagagacggcaagatgagtgaacatgctgttcccgaagagatgtacctgaggtttcctgataccgtattggagtatcttaaccagcaagccaagaagcgatcgaggctggtcaacattcctgagtactctttgaggagttccagtaccccgaggttcaagaaggtgggtgaagtggagatctccgtcgaggagttatttgaggaggttgagcggcgccaaagtgttaccagtgccaaggttcgccttgcacaagatgccgtgttagagcagctggagactgtctttggtgacgagatcggcggtccgaagcgcagcctgagtctggagaaggtgacattgggggtacctaggttgtcaagacggagacccactcccccagtgggttttagtgtctatgcccatggaagtaagagggctcgggttgacgatggtgacattttgcacatggtcgccgacttgcaaaatttccatattgatcgcagtcgtgtgaatgttgaggatcctcatcttgggtatcgggaagtgcatgagaggttaatgaggggtgctttggatcgcggccaagtggagagggatgaaatgaggaaggcgattgacgatggggtcgcgagaaggatggaattggagcaagcactcacgatggaggaatctcgtcgtcgggaggtcgaggacactgttgcccccttaaaggagtcaaatttggacctgactggcaagttgcagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

307

Amino Acids

34.81

Weight (kDa)

6.74

Isoelectric Point (pI)

55.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 800
Acc65I GGTACC 1 cut(s) 541
AccB1I GGYRCC 2 cut(s) 411, 541
AccBSI CCGCTC 1 cut(s) 409
AccII CGCG 4 cut(s) 62, 153, 756, 806
AciI CCGC 5 cut(s) 30, 153, 409, 498, 756
AclWI GGATC 3 cut(s) 692, 705, 759
AcoI YGGCCR 2 cut(s) 101, 757
AcsI RAATTY 2 cut(s) 661, 895
AcvI CACGTG 1 cut(s) 53
AcyI GRCGYC 1 cut(s) 412
AfaI GTAC 4 cut(s) 242, 323, 343, 543
AfiI CCNNNNNNNGG 5 cut(s) 152, 520, 578, 707, 886
AgsI TTSAA 1 cut(s) 355
AjuI GAANNNNNNNTTGG 2 cut(s) 518, 550
AluBI AGCT 1 cut(s) 469
AluI AGCT 1 cut(s) 469
Alw26I GTCTC 3 cut(s) 195, 467, 556
AlwI GGATC 3 cut(s) 692, 705, 759
Ama87I CYCGRG 2 cut(s) 346, 615
AoxI GGCC 3 cut(s) 55, 101, 757
ApeKI GCWGC 3 cut(s) 125, 466, 510
ApoI RAATTY 2 cut(s) 661, 895
Asp718I GGTACC 1 cut(s) 541
AspA2I CCTAGG 1 cut(s) 545
AspLEI GCGC 2 cut(s) 414, 510
AspS9I GGNCC 4 cut(s) 73, 143, 500, 901
AsuHPI GGTGA 4 cut(s) 377, 497, 541, 641
AsuNHI GCTAGC 2 cut(s) 116, 128
AvaI CYCGRG 2 cut(s) 346, 615
AvaII GGWCC 4 cut(s) 73, 143, 500, 901
AvrII CCTAGG 1 cut(s) 545
AxyI CCTNAGG 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 52
BaeI ACNNNNGTAYC 4 cut(s) 154, 187, 533, 566
BamHI GGATCC 1 cut(s) 697
BanI GGYRCC 2 cut(s) 411, 541
BanII GRGCYC 1 cut(s) 616
BbrPI CACGTG 1 cut(s) 53
BbvI GCAGC 3 cut(s) 112, 478, 522
BccI CCATC 5 cut(s) 134, 620, 791, 808, 832
BceAI ACGGC 2 cut(s) 220, 440
BciVI GTATCC 1 cut(s) 155
BcoDI GTCTC 3 cut(s) 195, 467, 556
BfaI CTAG 3 cut(s) 117, 129, 546
BfoI RGCGCY 1 cut(s) 415
BfuI GTATCC 1 cut(s) 155
BglII AGATCT 1 cut(s) 375
BisI GCNGC 5 cut(s) 126, 410, 467, 511, 757
BlnI CCTAGG 1 cut(s) 545
BlsI GCNGC 5 cut(s) 127, 411, 468, 512, 758
BmcAI AGTACT 1 cut(s) 323
Bme18I GGWCC 4 cut(s) 73, 143, 500, 901
BmeT110I CYCGRG 2 cut(s) 346, 615
BmgT120I GGNCC 4 cut(s) 73, 143, 500, 901
BmiI GGNNCC 4 cut(s) 145, 413, 543, 699
BmrI ACTGGG 1 cut(s) 569
BmsI GCATC 1 cut(s) 442
BmtI GCTAGC 2 cut(s) 120, 132
BmuI ACTGGG 1 cut(s) 569
BplI GAGNNNNNCTC 2 cut(s) 553, 585
BpmI CTGGAG 3 cut(s) 42, 491, 542
BsaAI YACGTR 1 cut(s) 53
BsaBI GATNNNNATC 1 cut(s) 702
BsaHI GRCGYC 1 cut(s) 412
BsaI GGTCTC 1 cut(s) 556
BsaJI CCNNGG 4 cut(s) 347, 432, 545, 598
BsaXI ACNNNNNCTCC 2 cut(s) 325, 355
Bsc4I CCNNNNNNNGG 5 cut(s) 152, 520, 578, 707, 886
Bse1I ACTGG 5 cut(s) 104, 339, 426, 575, 913
Bse21I CCTNAGG 1 cut(s) 245
Bse8I GATNNNNATC 1 cut(s) 702
BseDI CCNNGG 4 cut(s) 347, 432, 545, 598
BseGI GGATG 2 cut(s) 778, 819
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 5 cut(s) 152, 520, 578, 707, 886
BseMII CTCAG 3 cut(s) 236, 309, 506
BseNI ACTGG 5 cut(s) 104, 339, 426, 575, 913
BseRI GAGGAG 3 cut(s) 346, 401, 413
BseSI GKGCMC 1 cut(s) 52
BseXI GCAGC 3 cut(s) 112, 478, 522
Bsh1236I CGCG 4 cut(s) 62, 153, 756, 806
Bsh1285I CGRYCG 1 cut(s) 299
BshFI GGCC 3 cut(s) 57, 103, 759
BshNI GGYRCC 2 cut(s) 411, 541
BsiEI CGRYCG 1 cut(s) 299
BsiHKCI CYCGRG 2 cut(s) 346, 615
BsiSI CCGG 1 cut(s) 104
BslFI GGGAC 1 cut(s) 129
BslI CCNNNNNNNGG 5 cut(s) 152, 520, 578, 707, 886
BsmAI GTCTC 3 cut(s) 195, 467, 556
BsmBI CGTCTC 1 cut(s) 195
BsmFI GGGAC 1 cut(s) 129
BsnI GGCC 3 cut(s) 57, 103, 759
Bso31I GGTCTC 1 cut(s) 556
BsoBI CYCGRG 2 cut(s) 346, 615
Bsp1286I GDGCHC 2 cut(s) 52, 616
Bsp143I GATC 6 cut(s) 296, 375, 492, 673, 697, 751
Bsp19I CCATGG 1 cut(s) 598
Bsp68I TCGCGA 2 cut(s) 62, 806
BspACI CCGC 5 cut(s) 30, 153, 409, 498, 756
BspANI GGCC 3 cut(s) 57, 103, 759
BspCNI CTCAG 3 cut(s) 237, 310, 507
BspFNI CGCG 4 cut(s) 62, 153, 756, 806
BspLI GGNNCC 4 cut(s) 145, 413, 543, 699
BspOI GCTAGC 2 cut(s) 120, 132
BspPI GGATC 3 cut(s) 692, 705, 759
BspT107I GGYRCC 2 cut(s) 411, 541
BspTNI GGTCTC 1 cut(s) 556
BsrBI CCGCTC 1 cut(s) 409
BsrI ACTGG 5 cut(s) 104, 339, 426, 575, 913
BssECI CCNNGG 4 cut(s) 347, 432, 545, 598
BssMI GATC 6 cut(s) 296, 375, 492, 673, 697, 751
BssNI GRCGYC 1 cut(s) 412
BssT1I CCWWGG 3 cut(s) 432, 545, 598
Bst4CI ACNGT 3 cut(s) 262, 478, 874
Bst6I CTCTTC 1 cut(s) 228
BstACI GRCGYC 1 cut(s) 412
BstAPI GCANNNNNTGC 1 cut(s) 452
BstBAI YACGTR 1 cut(s) 53
BstC8I GCNNGC 4 cut(s) 118, 130, 285, 828
BstDEI CTNAG 3 cut(s) 245, 318, 515
BstDSI CCRYGG 1 cut(s) 598
BstF5I GGATG 2 cut(s) 778, 819
BstFNI CGCG 4 cut(s) 62, 153, 756, 806
BstH2I RGCGCY 1 cut(s) 415
BstHHI GCGC 2 cut(s) 414, 510
BstKTI GATC 6 cut(s) 299, 378, 495, 676, 700, 754
BstMAI GTCTC 3 cut(s) 195, 467, 556
BstMBI GATC 6 cut(s) 296, 375, 492, 673, 697, 751
BstMCI CGRYCG 1 cut(s) 299
BstMWI GCNNNNNNNGC 3 cut(s) 122, 301, 452
BstNSI RCATGY 1 cut(s) 224
BstSLI GKGCMC 1 cut(s) 52
BstUI CGCG 4 cut(s) 62, 153, 756, 806
BstV1I GCAGC 3 cut(s) 112, 478, 522
BstX2I RGATCY 2 cut(s) 375, 697
BstYI RGATCY 2 cut(s) 375, 697
Bsu36I CCTNAGG 1 cut(s) 245
BsuI GTATCC 1 cut(s) 155
BsuRI GGCC 3 cut(s) 57, 103, 759
BtgI CCRYGG 1 cut(s) 598
BtsCI GGATG 2 cut(s) 778, 819
BtsIMutI CAGTG 4 cut(s) 97, 433, 582, 870
BtuMI TCGCGA 2 cut(s) 62, 806
Cac8I GCNNGC 4 cut(s) 118, 130, 285, 828
CfoI GCGC 2 cut(s) 414, 510
Cfr13I GGNCC 4 cut(s) 73, 143, 500, 901
CpoI CGGWCCG 1 cut(s) 500
Csp6I GTAC 4 cut(s) 241, 322, 342, 542
CspI CGGWCCG 1 cut(s) 500
CviAII CATG 4 cut(s) 221, 599, 643, 725
CviQI GTAC 4 cut(s) 241, 322, 342, 542
DdeI CTNAG 3 cut(s) 245, 318, 515
DinI GGCGCC 1 cut(s) 413
DpnI GATC 6 cut(s) 298, 377, 494, 675, 699, 753
DpnII GATC 6 cut(s) 296, 375, 492, 673, 697, 751
DrdI GACNNNNNNGTC 1 cut(s) 800
DseDI GACNNNNNNGTC 1 cut(s) 800
EaeI YGGCCR 2 cut(s) 101, 757
Eam1104I CTCTTC 1 cut(s) 228
EarI CTCTTC 1 cut(s) 228
Eco130I CCWWGG 3 cut(s) 432, 545, 598
Eco24I GRGCYC 1 cut(s) 616
Eco31I GGTCTC 1 cut(s) 556
Eco47I GGWCC 4 cut(s) 73, 143, 500, 901
Eco72I CACGTG 1 cut(s) 53
Eco81I CCTNAGG 1 cut(s) 245
Eco88I CYCGRG 2 cut(s) 346, 615
EcoO109I RGGNCCY 1 cut(s) 73
EcoT14I CCWWGG 3 cut(s) 432, 545, 598
EcoT38I GRGCYC 1 cut(s) 616
EgeI GGCGCC 1 cut(s) 413
EheI GGCGCC 1 cut(s) 413
ErhI CCWWGG 3 cut(s) 432, 545, 598
Esp3I CGTCTC 1 cut(s) 195
FaeI CATG 4 cut(s) 224, 602, 646, 728
FaiI YATR 9 cut(s) 93, 113, 149, 222, 594, 600, 644, 669, 726
FaqI GGGAC 1 cut(s) 129
FatI CATG 4 cut(s) 220, 598, 642, 724
FauI CCCGC 1 cut(s) 23
Fnu4HI GCNGC 5 cut(s) 126, 410, 467, 511, 757
FokI GGATG 2 cut(s) 785, 826
FriOI GRGCYC 1 cut(s) 616
Fsp4HI GCNGC 5 cut(s) 126, 410, 467, 511, 757
FspBI CTAG 3 cut(s) 117, 129, 546
GlaI GCGC 2 cut(s) 413, 509
GluI GCNGC 5 cut(s) 126, 410, 467, 511, 757
GsuI CTGGAG 3 cut(s) 42, 491, 542
HaeII RGCGCY 1 cut(s) 415
HaeIII GGCC 3 cut(s) 57, 103, 759
HapII CCGG 1 cut(s) 104
HhaI GCGC 2 cut(s) 414, 510
Hin1I GRCGYC 1 cut(s) 412
Hin1II CATG 4 cut(s) 224, 602, 646, 728
Hin6I GCGC 2 cut(s) 412, 508
HinP1I GCGC 2 cut(s) 412, 508
HincII GTYRAC 2 cut(s) 310, 622
HindII GTYRAC 2 cut(s) 310, 622
HinfI GANTC 4 cut(s) 195, 517, 845, 890
HpaII CCGG 1 cut(s) 104
HphI GGTGA 4 cut(s) 377, 497, 541, 641
Hpy166II GTNNAC 3 cut(s) 218, 310, 622
Hpy188I TCNGA 2 cut(s) 200, 504
Hpy8I GTNNAC 3 cut(s) 218, 310, 622
Hpy99I CGWCG 4 cut(s) 16, 386, 855, 858
HpyAV CCTTC 5 cut(s) 10, 352, 520, 778, 804
HpyCH4III ACNGT 3 cut(s) 262, 478, 874
HpyCH4IV ACGT 1 cut(s) 52
HpyCH4V TGCA 6 cut(s) 4, 446, 640, 658, 724, 919
HpyF10VI GCNNNNNNNGC 3 cut(s) 122, 301, 452
HpyF3I CTNAG 3 cut(s) 245, 318, 515
HpySE526I ACGT 1 cut(s) 52
Hsp92I GRCGYC 1 cut(s) 412
Hsp92II CATG 4 cut(s) 224, 602, 646, 728
HspAI GCGC 2 cut(s) 412, 508
KasI GGCGCC 1 cut(s) 411
KpnI GGTACC 1 cut(s) 545
Kzo9I GATC 6 cut(s) 296, 375, 492, 673, 697, 751
LmnI GCTCC 1 cut(s) 823
Lsp1109I GCAGC 3 cut(s) 112, 478, 522
LweI GCATC 1 cut(s) 442
MaeI CTAG 3 cut(s) 117, 129, 546
MaeII ACGT 1 cut(s) 52
MaeIII GTNAC 4 cut(s) 421, 485, 529, 629
MalI GATC 6 cut(s) 298, 377, 494, 675, 699, 753
MbiI CCGCTC 1 cut(s) 409
MboI GATC 6 cut(s) 296, 375, 492, 673, 697, 751
MboII GAAGA 1 cut(s) 245
MflI RGATCY 2 cut(s) 375, 697
MhlI GDGCHC 2 cut(s) 52, 616
MluCI AATT 4 cut(s) 40, 661, 818, 895
Mly113I GGCGCC 1 cut(s) 412
MlyI GAGTC 2 cut(s) 526, 899
MseI TTAA 4 cut(s) 39, 276, 734, 884
MspA1I CMGCKG 1 cut(s) 469
MspI CCGG 1 cut(s) 104
MvnI CGCG 4 cut(s) 62, 153, 756, 806
MwoI GCNNNNNNNGC 3 cut(s) 122, 301, 452
NarI GGCGCC 1 cut(s) 412
NcoI CCATGG 1 cut(s) 598
NdeII GATC 6 cut(s) 296, 375, 492, 673, 697, 751
NheI GCTAGC 2 cut(s) 116, 128
NlaIII CATG 4 cut(s) 224, 602, 646, 728
NlaIV GGNNCC 4 cut(s) 145, 413, 543, 699
NmuCI GTSAC 3 cut(s) 485, 529, 629
NruI TCGCGA 2 cut(s) 62, 806
NspI RCATGY 1 cut(s) 224
PfeI GAWTC 2 cut(s) 195, 845
PkrI GCNGC 5 cut(s) 127, 411, 468, 512, 758
Ple19I CGATCG 1 cut(s) 299
PleI GAGTC 2 cut(s) 525, 898
PluTI GGCGCC 1 cut(s) 415
PmaCI CACGTG 1 cut(s) 53
PmlI CACGTG 1 cut(s) 53
PpsI GAGTC 2 cut(s) 525, 898
Ppu21I YACGTR 1 cut(s) 53
PpuMI RGGWCCY 1 cut(s) 73
Psp5II RGGWCCY 1 cut(s) 73
PspCI CACGTG 1 cut(s) 53
PspN4I GGNNCC 4 cut(s) 145, 413, 543, 699
PspPI GGNCC 4 cut(s) 73, 143, 500, 901
PspPPI RGGWCCY 1 cut(s) 73
PsuI RGATCY 2 cut(s) 375, 697
PvuI CGATCG 1 cut(s) 299
PvuII CAGCTG 1 cut(s) 469
RruI TCGCGA 2 cut(s) 62, 806
RsaI GTAC 4 cut(s) 242, 323, 343, 543
RsaNI GTAC 4 cut(s) 241, 322, 342, 542
Rsr2I CGGWCCG 1 cut(s) 500
RsrII CGGWCCG 1 cut(s) 500
SaqAI TTAA 4 cut(s) 39, 276, 734, 884
SatI GCNGC 5 cut(s) 126, 410, 467, 511, 757
Sau3AI GATC 6 cut(s) 296, 375, 492, 673, 697, 751
Sau96I GGNCC 4 cut(s) 73, 143, 500, 901
ScaI AGTACT 1 cut(s) 323
SchI GAGTC 2 cut(s) 526, 899
SduI GDGCHC 2 cut(s) 52, 616
SfaNI GCATC 1 cut(s) 442
SfoI GGCGCC 1 cut(s) 413
SinI GGWCC 4 cut(s) 73, 143, 500, 901
Sse9I AATT 4 cut(s) 40, 661, 818, 895
SsiI CCGC 5 cut(s) 30, 153, 409, 498, 756
SspDI GGCGCC 1 cut(s) 411
SspMI CTAG 3 cut(s) 117, 129, 546
StyI CCWWGG 3 cut(s) 432, 545, 598
TaaI ACNGT 3 cut(s) 262, 478, 874
TaiI ACGT 1 cut(s) 55
TaqI TCGA 4 cut(s) 11, 299, 384, 864
TasI AATT 4 cut(s) 40, 661, 818, 895
TatI WGTACW 1 cut(s) 321
TauI GCSGC 2 cut(s) 412, 759
TfiI GAWTC 2 cut(s) 195, 845
Tru1I TTAA 4 cut(s) 39, 276, 734, 884
Tru9I TTAA 4 cut(s) 39, 276, 734, 884
TscAI CASTG 4 cut(s) 104, 433, 582, 877
TseFI GTSAC 3 cut(s) 485, 529, 629
TseI GCWGC 3 cut(s) 125, 466, 510
Tsp45I GTSAC 3 cut(s) 485, 529, 629
TspDTI ATGAA 2 cut(s) 69, 789
TspGWI ACGGA 2 cut(s) 370, 574
TspRI CASTG 4 cut(s) 104, 433, 582, 877
VpaK11BI GGWCC 4 cut(s) 73, 143, 500, 901
XapI RAATTY 2 cut(s) 661, 895
XceI RCATGY 1 cut(s) 224
XcmI CCANNNNNNNNNTGG 1 cut(s) 574
XmaJI CCTAGG 1 cut(s) 545
XspI CTAG 3 cut(s) 117, 129, 546
ZrmI AGTACT 1 cut(s) 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.