Rroxscaffold_6G00401460

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000075
Physical Location & Seq
Reverse (-)
23812170 .. 23814650
2481 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00401460.1

Sequence Viewer

Length: 1116 bp
ATGAGTCTCGTGCTTCCGATACTTGCACTTGGGAGGTATGTGCATACCAACAAGTCCCCCAAGTCCCGAGTCAAGAGTTCTCTTGGGTGGGGAGTTTGTCTTTGGTTAAAGTATCGAAAGTGTAAGATGAGTTTACGCCACGTGGCTTCCGTACAGCCATTACCCCCGTCCCCAAGTCCCCACTTAAGAGGAGTCATGGTTGGGAAGCCTGGTGTACCGGAGTCCGGATCATGCAATAATGGCGTAGTGGTGAGGAGCCGAGGCGACGAGCATGACTTCGTAACGCTTAGGGATGTCGGACACGTGGCGCGGGGGTGGCGAAGGTATTTCTCGCAATCGTGGCCAAGGTGTTCCCCGTGGTGGCGCGTGGGTGGTTCCCGAGGAGGTGGTGAGGATGCTTCCAAAGGAGGTAGAGGGGTTCGTCCCGAGGAGGTGGAGGGGGGTTCATCTCGTGGAAGTGGGGAGGGTTCGTCCCTAGGAGTTGGGCAACCGTTGTTCCCGATATGCTTGAGATGGAGAATGTTGAAGTGTTGGAGATTCCGCGATTGCCACCGGGCGGTTGCTCTTGAAGATATGACTATTGATCGGCCTGGTCCGAACGCGTACTCGACGAAAGTCGGAGATAGCGGATGTGTAAATTTTAGGGCGTGCGGCCATGCCATTATTGAGGACTTGCCGTCAAAAATTTATGCTTCTTTGGCGGGGAAGGCCTTGCTTGGTAGGAGGCCGGTGGCGAATCCGGATATGGTGCATCGGGCTCCGACTCGTTTCCAACCCATCCGTGAGTATCGCGATTGCAATTTTGCGGATATGCCGAGCGAGGCCGCTAGCAAAAGTGTCGCCTCGTACACTAATGTCGATCCCGATACTATTATTCGGGGGTTGTTACGAGAATCGGATACCGCGAGTATCTCACCGGCGAGCCGAGGAAGAGGCCGATGCCAAGGGGCACGAGGTTCCGGATACCGGGAACCGGCGCAAAATTCCCCGCGTCGCGCAATGCGGTGGGTGAAGGCGGCGAGCGTCCGCCTTGGTGACGTGGCTCGGGCCTCGGAGCTAATGGTTGAAGTGGAGATCTCCATCGAGGAGTTACTTGGAAGAGGTGGAGCGACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

371

Amino Acids

40.5

Weight (kDa)

10.04

Isoelectric Point (pI)

54.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 8 cut(s) 310, 366, 543, 602, 792, 905, 991, 996
AccIII TCCGGA 3 cut(s) 224, 739, 959
AclWI GGATC 2 cut(s) 235, 854
AcoI YGGCCR 2 cut(s) 341, 652
AcsI RAATTY 3 cut(s) 637, 684, 982
AcvI CACGTG 2 cut(s) 142, 304
AfaI GTAC 4 cut(s) 153, 216, 605, 848
AfiI CCNNNNNNNGG 5 cut(s) 224, 360, 556, 966, 973
AflII CTTAAG 1 cut(s) 184
AflIII ACRYGT 2 cut(s) 301, 600
AgsI TTSAA 3 cut(s) 526, 569, 1067
AhdI GACNNNNNGTC 1 cut(s) 676
AjiI CACGTC 2 cut(s) 1039, 1113
AjnI CCWGG 2 cut(s) 208, 589
AluBI AGCT 1 cut(s) 1057
AluI AGCT 1 cut(s) 1057
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 2 cut(s) 235, 854
Ama87I CYCGRG 4 cut(s) 66, 378, 425, 1044
Aor13HI TCCGGA 3 cut(s) 224, 739, 959
AoxI GGCC 8 cut(s) 341, 587, 652, 708, 725, 822, 934, 1047
ApoI RAATTY 3 cut(s) 637, 684, 982
AspA2I CCTAGG 1 cut(s) 475
AspLEI GCGC 4 cut(s) 310, 366, 979, 998
AspS9I GGNCC 2 cut(s) 593, 1047
AsuC2I CCSGG 2 cut(s) 554, 968
AsuHPI GGTGA 5 cut(s) 262, 401, 906, 1021, 1046
AsuNHI GCTAGC 1 cut(s) 827
AvaI CYCGRG 4 cut(s) 66, 378, 425, 1044
AvaII GGWCC 1 cut(s) 593
AvrII CCTAGG 1 cut(s) 475
BaeGI GKGCMC 1 cut(s) 952
BalI TGGCCA 1 cut(s) 343
BanII GRGCYC 1 cut(s) 760
BauI CACGAG 3 cut(s) 8, 450, 951
BbrPI CACGTG 2 cut(s) 142, 304
BccI CCATC 3 cut(s) 507, 785, 1088
BceAI ACGGC 1 cut(s) 661
BcgI CGANNNNNNTGC 2 cut(s) 820, 854
BciT130I CCWGG 2 cut(s) 210, 591
BciVI GTATCC 2 cut(s) 892, 956
BcnI CCSGG 2 cut(s) 554, 968
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 2 cut(s) 476, 828
BfrI CTTAAG 1 cut(s) 184
BfuI GTATCC 2 cut(s) 892, 956
BglII AGATCT 1 cut(s) 1074
BisI GCNGC 3 cut(s) 652, 825, 1017
BlnI CCTAGG 1 cut(s) 475
BlsI GCNGC 3 cut(s) 653, 826, 1018
Bme1390I CCNGG 4 cut(s) 210, 554, 591, 968
Bme18I GGWCC 1 cut(s) 593
BmeRI GACNNNNNGTC 1 cut(s) 676
BmeT110I CYCGRG 4 cut(s) 66, 378, 425, 1044
BmgBI CACGTC 2 cut(s) 1039, 1113
BmgT120I GGNCC 2 cut(s) 593, 1047
BmiI GGNNCC 5 cut(s) 257, 376, 759, 958, 972
BmrFI CCNGG 4 cut(s) 210, 554, 591, 968
BmsI GCATC 3 cut(s) 385, 760, 929
BmtI GCTAGC 1 cut(s) 831
BoxI GACNNNNGTC 1 cut(s) 614
Bpu10I CCTNAGC 1 cut(s) 287
BpuEI CTTGAG 1 cut(s) 529
BpuMI CCSGG 2 cut(s) 554, 968
BsaAI YACGTR 2 cut(s) 142, 304
BsaBI GATNNNNATC 1 cut(s) 1079
BsaWI WCCGGW 4 cut(s) 217, 224, 739, 959
BsaXI ACNNNNNCTCC 4 cut(s) 183, 213, 455, 485
Bsc4I CCNNNNNNNGG 5 cut(s) 224, 360, 556, 966, 973
Bse118I RCCGGY 3 cut(s) 727, 916, 973
Bse3DI GCAATG 1 cut(s) 1005
Bse8I GATNNNNATC 1 cut(s) 1079
BseAI TCCGGA 3 cut(s) 224, 739, 959
BseBI CCWGG 2 cut(s) 210, 591
BseGI GGATG 4 cut(s) 298, 400, 635, 777
BseJI GATNNNNATC 1 cut(s) 1079
BseLI CCNNNNNNNGG 5 cut(s) 224, 360, 556, 966, 973
BseMI GCAATG 1 cut(s) 1005
BseRI GAGGAG 5 cut(s) 204, 268, 396, 443, 1100
BseSI GKGCMC 1 cut(s) 952
Bsh1236I CGCG 8 cut(s) 310, 366, 543, 602, 792, 905, 991, 996
BshFI GGCC 8 cut(s) 343, 589, 654, 710, 727, 824, 936, 1049
BsiHKCI CYCGRG 4 cut(s) 66, 378, 425, 1044
BsiSI CCGG 9 cut(s) 218, 225, 553, 728, 740, 917, 960, 967, 974
BslFI GGGAC 6 cut(s) 40, 49, 154, 162, 408, 457
BslI CCNNNNNNNGG 5 cut(s) 224, 360, 556, 966, 973
BsmAI GTCTC 1 cut(s) 11
BsmFI GGGAC 6 cut(s) 40, 49, 154, 162, 408, 457
BsnI GGCC 8 cut(s) 343, 589, 654, 710, 727, 824, 936, 1049
BsoBI CYCGRG 4 cut(s) 66, 378, 425, 1044
Bsp1286I GDGCHC 2 cut(s) 760, 952
Bsp13I TCCGGA 3 cut(s) 224, 739, 959
Bsp143I GATC 4 cut(s) 227, 583, 859, 1074
Bsp68I TCGCGA 1 cut(s) 792
BspANI GGCC 8 cut(s) 343, 589, 654, 710, 727, 824, 936, 1049
BspEI TCCGGA 3 cut(s) 224, 739, 959
BspFNI CGCG 8 cut(s) 310, 366, 543, 602, 792, 905, 991, 996
BspLI GGNNCC 5 cut(s) 257, 376, 759, 958, 972
BspOI GCTAGC 1 cut(s) 831
BspPI GGATC 2 cut(s) 235, 854
BspTI CTTAAG 1 cut(s) 184
BsrDI GCAATG 1 cut(s) 1005
BsrFI RCCGGY 3 cut(s) 727, 916, 973
BssAI RCCGGY 3 cut(s) 727, 916, 973
BssMI GATC 4 cut(s) 227, 583, 859, 1074
BssSI CACGAG 3 cut(s) 8, 450, 951
BssT1I CCWWGG 4 cut(s) 344, 475, 943, 1030
Bst2BI CACGAG 3 cut(s) 8, 450, 951
Bst2UI CCWGG 2 cut(s) 210, 591
Bst4CI ACNGT 1 cut(s) 492
Bst6I CTCTTC 2 cut(s) 925, 1093
BstAFI CTTAAG 1 cut(s) 184
BstBAI YACGTR 2 cut(s) 142, 304
BstC8I GCNNGC 4 cut(s) 649, 829, 922, 1021
BstDEI CTNAG 1 cut(s) 287
BstDSI CCRYGG 1 cut(s) 356
BstF5I GGATG 4 cut(s) 298, 400, 635, 777
BstFNI CGCG 8 cut(s) 310, 366, 543, 602, 792, 905, 991, 996
BstHHI GCGC 4 cut(s) 310, 366, 979, 998
BstKTI GATC 4 cut(s) 230, 586, 862, 1077
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 4 cut(s) 227, 583, 859, 1074
BstMWI GCNNNNNNNGC 5 cut(s) 240, 316, 340, 698, 707
BstNI CCWGG 2 cut(s) 210, 591
BstPAI GACNNNNGTC 1 cut(s) 614
BstSCI CCNGG 4 cut(s) 208, 552, 589, 966
BstSLI GKGCMC 1 cut(s) 952
BstUI CGCG 8 cut(s) 310, 366, 543, 602, 792, 905, 991, 996
BstX2I RGATCY 1 cut(s) 1074
BstYI RGATCY 1 cut(s) 1074
BsuI GTATCC 2 cut(s) 892, 956
BsuRI GGCC 8 cut(s) 343, 589, 654, 710, 727, 824, 936, 1049
BtgI CCRYGG 1 cut(s) 356
BtrI CACGTC 2 cut(s) 1039, 1113
BtsCI GGATG 4 cut(s) 298, 400, 635, 777
BtuMI TCGCGA 1 cut(s) 792
Cac8I GCNNGC 4 cut(s) 649, 829, 922, 1021
CfoI GCGC 4 cut(s) 310, 366, 979, 998
Cfr10I RCCGGY 3 cut(s) 727, 916, 973
Cfr13I GGNCC 2 cut(s) 593, 1047
CseI GACGC 2 cut(s) 980, 1012
Csp6I GTAC 4 cut(s) 152, 215, 604, 847
CviAII CATG 4 cut(s) 196, 231, 272, 656
CviQI GTAC 4 cut(s) 152, 215, 604, 847
DdeI CTNAG 1 cut(s) 287
DpnI GATC 4 cut(s) 229, 585, 861, 1076
DpnII GATC 4 cut(s) 227, 583, 859, 1074
DriI GACNNNNNGTC 1 cut(s) 676
EaeI YGGCCR 2 cut(s) 341, 652
Eam1104I CTCTTC 2 cut(s) 925, 1093
Eam1105I GACNNNNNGTC 1 cut(s) 676
EarI CTCTTC 2 cut(s) 925, 1093
EciI GGCGGA 1 cut(s) 1016
Eco130I CCWWGG 4 cut(s) 344, 475, 943, 1030
Eco147I AGGCCT 1 cut(s) 710
Eco24I GRGCYC 1 cut(s) 760
Eco47I GGWCC 1 cut(s) 593
Eco72I CACGTG 2 cut(s) 142, 304
Eco88I CYCGRG 4 cut(s) 66, 378, 425, 1044
EcoRII CCWGG 2 cut(s) 208, 589
EcoT14I CCWWGG 4 cut(s) 344, 475, 943, 1030
EcoT38I GRGCYC 1 cut(s) 760
ErhI CCWWGG 4 cut(s) 344, 475, 943, 1030
FaeI CATG 4 cut(s) 199, 234, 275, 659
FaqI GGGAC 6 cut(s) 40, 49, 154, 162, 408, 457
FatI CATG 4 cut(s) 195, 230, 271, 655
FauI CCCGC 3 cut(s) 303, 694, 996
Fnu4HI GCNGC 3 cut(s) 652, 825, 1017
FokI GGATG 4 cut(s) 305, 407, 642, 764
FriOI GRGCYC 1 cut(s) 760
Fsp4HI GCNGC 3 cut(s) 652, 825, 1017
FspBI CTAG 2 cut(s) 476, 828
GlaI GCGC 4 cut(s) 309, 365, 978, 997
GluI GCNGC 3 cut(s) 652, 825, 1017
HaeIII GGCC 8 cut(s) 343, 589, 654, 710, 727, 824, 936, 1049
HapII CCGG 9 cut(s) 218, 225, 553, 728, 740, 917, 960, 967, 974
HgaI GACGC 2 cut(s) 980, 1012
HhaI GCGC 4 cut(s) 310, 366, 979, 998
Hin1II CATG 4 cut(s) 199, 234, 275, 659
Hin6I GCGC 4 cut(s) 308, 364, 977, 996
HinP1I GCGC 4 cut(s) 308, 364, 977, 996
HinfI GANTC 8 cut(s) 4, 69, 192, 221, 537, 736, 763, 893
HpaII CCGG 9 cut(s) 218, 225, 553, 728, 740, 917, 960, 967, 974
HphI GGTGA 5 cut(s) 262, 401, 906, 1021, 1046
Hpy166II GTNNAC 3 cut(s) 134, 215, 849
Hpy188I TCNGA 7 cut(s) 18, 299, 597, 620, 762, 898, 1054
Hpy8I GTNNAC 3 cut(s) 134, 215, 849
Hpy99I CGWCG 4 cut(s) 269, 613, 996, 1114
HpyAV CCTTC 3 cut(s) 315, 700, 1006
HpyCH4III ACNGT 1 cut(s) 492
HpyCH4IV ACGT 4 cut(s) 141, 303, 1038, 1112
HpyCH4V TGCA 5 cut(s) 26, 43, 234, 751, 798
HpyF10VI GCNNNNNNNGC 5 cut(s) 240, 316, 340, 698, 707
HpyF3I CTNAG 1 cut(s) 287
HpySE526I ACGT 4 cut(s) 141, 303, 1038, 1112
Hsp92II CATG 4 cut(s) 199, 234, 275, 659
HspAI GCGC 4 cut(s) 308, 364, 977, 996
Kpn2I TCCGGA 3 cut(s) 224, 739, 959
Kzo9I GATC 4 cut(s) 227, 583, 859, 1074
LmnI GCTCC 4 cut(s) 255, 763, 1054, 1106
LweI GCATC 3 cut(s) 385, 760, 929
MaeI CTAG 2 cut(s) 476, 828
MaeII ACGT 4 cut(s) 141, 303, 1038, 1112
MaeIII GTNAC 4 cut(s) 280, 885, 1034, 1089
MalI GATC 4 cut(s) 229, 585, 861, 1076
MboI GATC 4 cut(s) 227, 583, 859, 1074
MboII GAAGA 3 cut(s) 581, 942, 1110
MflI RGATCY 1 cut(s) 1074
MhlI GDGCHC 2 cut(s) 760, 952
MlsI TGGCCA 1 cut(s) 343
MluCI AATT 4 cut(s) 637, 684, 799, 982
MluI ACGCGT 1 cut(s) 600
MluNI TGGCCA 1 cut(s) 343
MlyI GAGTC 5 cut(s) 13, 78, 201, 230, 757
MmeI TCCRAC 5 cut(s) 277, 512, 598, 785, 796
Mox20I TGGCCA 1 cut(s) 343
MroI TCCGGA 3 cut(s) 224, 739, 959
MscI TGGCCA 1 cut(s) 343
MseI TTAA 2 cut(s) 107, 185
Msp20I TGGCCA 1 cut(s) 343
MspCI CTTAAG 1 cut(s) 184
MspI CCGG 9 cut(s) 218, 225, 553, 728, 740, 917, 960, 967, 974
MspR9I CCNGG 4 cut(s) 210, 554, 591, 968
MvaI CCWGG 2 cut(s) 210, 591
MvnI CGCG 8 cut(s) 310, 366, 543, 602, 792, 905, 991, 996
MwoI GCNNNNNNNGC 5 cut(s) 240, 316, 340, 698, 707
NciI CCSGG 2 cut(s) 554, 968
NdeII GATC 4 cut(s) 227, 583, 859, 1074
NheI GCTAGC 1 cut(s) 827
NlaIII CATG 4 cut(s) 199, 234, 275, 659
NlaIV GGNNCC 5 cut(s) 257, 376, 759, 958, 972
NmeAIII GCCGAG 3 cut(s) 284, 840, 950
NmuCI GTSAC 1 cut(s) 1034
NruI TCGCGA 1 cut(s) 792
PceI AGGCCT 1 cut(s) 710
PcsI WCGNNNNNNNCGW 2 cut(s) 147, 902
PfeI GAWTC 3 cut(s) 537, 736, 893
PkrI GCNGC 3 cut(s) 653, 826, 1018
PleI GAGTC 5 cut(s) 12, 77, 200, 229, 757
PmaCI CACGTG 2 cut(s) 142, 304
PmlI CACGTG 2 cut(s) 142, 304
PpsI GAGTC 5 cut(s) 12, 77, 200, 229, 757
Ppu21I YACGTR 2 cut(s) 142, 304
PshAI GACNNNNGTC 1 cut(s) 614
Psp6I CCWGG 2 cut(s) 208, 589
PspCI CACGTG 2 cut(s) 142, 304
PspGI CCWGG 2 cut(s) 208, 589
PspN4I GGNNCC 5 cut(s) 257, 376, 759, 958, 972
PspPI GGNCC 2 cut(s) 593, 1047
PsuI RGATCY 1 cut(s) 1074
RruI TCGCGA 1 cut(s) 792
RsaI GTAC 4 cut(s) 153, 216, 605, 848
RsaNI GTAC 4 cut(s) 152, 215, 604, 847
SaqAI TTAA 2 cut(s) 107, 185
SatI GCNGC 3 cut(s) 652, 825, 1017
Sau3AI GATC 4 cut(s) 227, 583, 859, 1074
Sau96I GGNCC 2 cut(s) 593, 1047
SchI GAGTC 5 cut(s) 13, 78, 201, 230, 757
ScrFI CCNGG 4 cut(s) 210, 554, 591, 968
SduI GDGCHC 2 cut(s) 760, 952
SfaNI GCATC 3 cut(s) 385, 760, 929
SgrAI CRCCGGYG 1 cut(s) 916
SinI GGWCC 1 cut(s) 593
SmlI CTYRAG 2 cut(s) 184, 508
SmoI CTYRAG 2 cut(s) 184, 508
Sse9I AATT 4 cut(s) 637, 684, 799, 982
SseBI AGGCCT 1 cut(s) 710
SspMI CTAG 2 cut(s) 476, 828
StuI AGGCCT 1 cut(s) 710
StyD4I CCNGG 4 cut(s) 208, 552, 589, 966
StyI CCWWGG 4 cut(s) 344, 475, 943, 1030
TaaI ACNGT 1 cut(s) 492
TaiI ACGT 4 cut(s) 144, 306, 1041, 1115
TaqI TCGA 4 cut(s) 115, 608, 858, 1083
TasI AATT 4 cut(s) 637, 684, 799, 982
TauI GCSGC 3 cut(s) 654, 827, 1019
TfiI GAWTC 3 cut(s) 537, 736, 893
Tru1I TTAA 2 cut(s) 107, 185
Tru9I TTAA 2 cut(s) 107, 185
TseFI GTSAC 1 cut(s) 1034
Tsp45I GTSAC 1 cut(s) 1034
TspDTI ATGAA 1 cut(s) 435
TspGWI ACGGA 2 cut(s) 139, 770
Vha464I CTTAAG 1 cut(s) 184
VpaK11BI GGWCC 1 cut(s) 593
XapI RAATTY 3 cut(s) 637, 684, 982
XmaJI CCTAGG 1 cut(s) 475
XspI CTAG 2 cut(s) 476, 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.