Rmu_sc0002082.1_g000066

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002082.1
OG0000075
Physical Location & Seq
Forward (+)
264367 .. 266669
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002082.1_g000066.1.cds

Sequence Viewer

Length: 1527 bp
atgcaatacttaacgaaagctggcgagagcggatgtgtgaatttaagggcacgtggcctcacgattattgaggacctgccgtcaaacatttatggtagctggcggggaaggccttgcctggttggaggccactgggtgatgggtgcgttttccaggggagcgagggggttcaatcgcctgtgtaggctccgatatacgagaggtttcagttggggaggtgtccgggggttgttgaaagagtcagagacggcaaggcgagttgatgatgatctaccaaataaggtgtgtgtgactaaccatcgggtgaacatgctgttacccgatgagatgtatttgtggtttcccaatattgttttggagtatctcaactggcgagctgaggaagaggccggtgcagaggtgcatgagactcaagttactcgggaatcgtcacaaagtccccaagggttgtcaatgcaggtggggggggagcttggtggtgtggctcggccttcgaagccagtggttgaggtgaagatctccgttgaggagttaccggaagaagtggagcaacaccaaagctataccagcgcacatgctcgtctggtgcaggatgcggtgttggaacagctggatgcgatctttggcgatgacactggcggtccagagtctagagaagacgtgattgggggtgcccaagttaccgacgtgggtgcccgtggtcaggttggtgagggagataggatccgagtgacagataagtgcacccgcacagacaggtccctaatcagtgtgagtgtcgatactcatgggggtaagaggtctcggactgagaatgtatcaccctcgaggtcaacaagtgggggctcgcgggtttctcgagatgaggttgccgggggtcttgcacccactctgggcaagattggagttactaacggtgtcatcctacatatggttgccgatttgcggaactgtcatcgcgatcgcagtcacgcaaatgctgaagatccacgcttggggtatctggaggctcaggagaggctgatgaggagtgcattggatcaaggccaggtggagtgcgaggatatgaggggagcgattgatgacgggatagcgaggaggatggagttggagcgatcactcacagtggagggggctcgtcgtcaaaaggccgaggatgctatcgttccactgaaaaagtccaacttggatctaaccaggaagctacaacaggcaaaggatggcctgaaagtggtggatcaggttagggcctgggttagtgaggctgaagagtgcctgcaagagttggaaaggcaagtcctggaacgcgatgtagagttggagcttcgcgcggctgctctggagagtttggctccttttccctatcgagtagtggaattggaggggcaggttggtgctctacaaagggaggttgaccatttacgaaatattaagttcgaggcgggcgagagggaggcgaagatggagcgactgaggaaggagttagttgagcagcaaactcgggccagtagctttaccgagcactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

508

Amino Acids

56.51

Weight (kDa)

5.6

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 448
AbsI CCTCGAGG 1 cut(s) 826
Acc36I ACCTGC 3 cut(s) 84, 448, 1378
AccB1I GGYRCC 2 cut(s) 671, 692
AccBSI CCGCTC 1 cut(s) 30
AccII CGCG 5 cut(s) 850, 960, 1308, 1329, 1331
AciI CCGC 9 cut(s) 30, 103, 596, 639, 748, 850, 946, 1331, 1442
AclWI GGATC 6 cut(s) 718, 731, 980, 1047, 1197, 1245
AcsI RAATTY 1 cut(s) 40
AcuI CTGAAG 2 cut(s) 1002, 1287
AcvI CACGTG 1 cut(s) 53
AdeI CACNNNGTG 1 cut(s) 136
AfiI CCNNNNNNNGG 6 cut(s) 703, 893, 931, 945, 995, 1231
AgsI TTSAA 2 cut(s) 172, 235
AhdI GACNNNNNGTC 1 cut(s) 79
AjiI CACGTC 2 cut(s) 661, 688
AjnI CCWGG 6 cut(s) 117, 152, 1047, 1196, 1250, 1299
AjuI GAANNNNNNNTTGG 2 cut(s) 648, 680
AluBI AGCT 9 cut(s) 20, 99, 377, 472, 561, 610, 1204, 1324, 1512
AluI AGCT 9 cut(s) 20, 99, 377, 472, 561, 610, 1204, 1324, 1512
Alw21I GWGCWC 3 cut(s) 746, 1399, 1524
Alw26I GTCTC 3 cut(s) 239, 401, 807
Alw44I GTGCAC 1 cut(s) 742
AlwI GGATC 6 cut(s) 718, 731, 980, 1047, 1197, 1245
Ama87I CYCGRG 4 cut(s) 420, 826, 858, 1500
ApaLI GTGCAC 1 cut(s) 742
ApeKI GCWGC 2 cut(s) 1334, 1492
ApoI RAATTY 1 cut(s) 40
AsiSI GCGATCGC 1 cut(s) 964
AspLEI GCGC 2 cut(s) 572, 1331
AspS9I GGNCC 5 cut(s) 73, 641, 759, 1248, 1503
AsuC2I CCSGG 2 cut(s) 224, 874
AsuHPI GGTGA 5 cut(s) 148, 316, 523, 722, 813
AsuII TTCGAA 1 cut(s) 494
AvaI CYCGRG 4 cut(s) 420, 826, 858, 1500
AvaII GGWCC 3 cut(s) 73, 641, 759
BaeGI GKGCMC 4 cut(s) 52, 676, 697, 746
BamHI GGATCC 1 cut(s) 723
BanI GGYRCC 2 cut(s) 671, 692
BanII GRGCYC 2 cut(s) 848, 1138
BbrPI CACGTG 1 cut(s) 53
BbsI GAAGAC 1 cut(s) 663
Bbv12I GWGCWC 3 cut(s) 746, 1399, 1524
BbvCI CCTCAGC 1 cut(s) 378
BbvI GCAGC 2 cut(s) 1321, 1504
BccI CCATC 5 cut(s) 133, 306, 1096, 1214, 1456
BceAI ACGGC 2 cut(s) 64, 264
BcgI CGANNNNNNTGC 4 cut(s) 674, 708, 1481, 1515
BciT130I CCWGG 6 cut(s) 119, 154, 1049, 1198, 1252, 1301
BcnI CCSGG 2 cut(s) 224, 874
BcoDI GTCTC 3 cut(s) 239, 401, 807
BfaI CTAG 1 cut(s) 651
BfuAI ACCTGC 3 cut(s) 84, 448, 1378
BglII AGATCT 1 cut(s) 516
BisI GCNGC 3 cut(s) 1332, 1335, 1493
BlsI GCNGC 3 cut(s) 1333, 1336, 1494
Bme1390I CCNGG 8 cut(s) 119, 154, 224, 874, 1049, 1198, 1252, 1301
Bme18I GGWCC 3 cut(s) 73, 641, 759
BmeRI GACNNNNNGTC 1 cut(s) 79
BmeT110I CYCGRG 4 cut(s) 420, 826, 858, 1500
BmgBI CACGTC 2 cut(s) 661, 688
BmgT120I GGNCC 5 cut(s) 73, 641, 759, 1248, 1503
BmiI GGNNCC 6 cut(s) 188, 673, 694, 725, 761, 1353
BmrFI CCNGG 8 cut(s) 119, 154, 224, 874, 1049, 1198, 1252, 1301
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 3 cut(s) 583, 604, 1147
BmuI ACTGGG 1 cut(s) 142
BpiI GAAGAC 1 cut(s) 663
BplI GAGNNNNNCTC 2 cut(s) 1336, 1368
BpmI CTGGAG 2 cut(s) 1025, 1361
Bpu10I CCTNAGC 2 cut(s) 378, 1011
Bpu14I TTCGAA 1 cut(s) 494
BpuEI CTTGAG 1 cut(s) 396
BpuMI CCSGG 2 cut(s) 224, 874
BsaAI YACGTR 1 cut(s) 53
BsaBI GATNNNNATC 1 cut(s) 267
BsaI GGTCTC 1 cut(s) 807
BsaJI CCNNGG 7 cut(s) 153, 223, 442, 697, 873, 1152, 1251
BsaWI WCCGGW 1 cut(s) 535
Bsc4I CCNNNNNNNGG 6 cut(s) 703, 893, 931, 945, 995, 1231
Bse118I RCCGGY 1 cut(s) 389
Bse1I ACTGG 5 cut(s) 137, 374, 500, 640, 1506
Bse8I GATNNNNATC 1 cut(s) 267
BseBI CCWGG 6 cut(s) 119, 154, 1049, 1198, 1252, 1301
BseDI CCNNGG 7 cut(s) 153, 223, 442, 697, 873, 1152, 1251
BseGI GGATG 7 cut(s) 38, 598, 619, 921, 1107, 1162, 1225
BseJI GATNNNNATC 1 cut(s) 267
BseLI CCNNNNNNNGG 6 cut(s) 703, 893, 931, 945, 995, 1231
BseMII CTCAG 4 cut(s) 369, 801, 1025, 1463
BseNI ACTGG 5 cut(s) 137, 374, 500, 640, 1506
BseRI GAGGAG 3 cut(s) 542, 1042, 1111
BseSI GKGCMC 4 cut(s) 52, 676, 697, 746
BseXI GCAGC 2 cut(s) 1321, 1504
BsgI GTGCAG 2 cut(s) 414, 608
Bsh1236I CGCG 5 cut(s) 850, 960, 1308, 1329, 1331
Bsh1285I CGRYCG 1 cut(s) 964
BshNI GGYRCC 2 cut(s) 671, 692
BsiEI CGRYCG 1 cut(s) 964
BsiHKAI GWGCWC 3 cut(s) 746, 1399, 1524
BsiHKCI CYCGRG 4 cut(s) 420, 826, 858, 1500
BsiSI CCGG 4 cut(s) 223, 390, 536, 873
BslFI GGGAC 2 cut(s) 423, 745
BslI CCNNNNNNNGG 6 cut(s) 703, 893, 931, 945, 995, 1231
BsmAI GTCTC 3 cut(s) 239, 401, 807
BsmBI CGTCTC 1 cut(s) 239
BsmFI GGGAC 2 cut(s) 423, 745
Bso31I GGTCTC 1 cut(s) 807
BsoBI CYCGRG 4 cut(s) 420, 826, 858, 1500
Bsp119I TTCGAA 1 cut(s) 494
Bsp1286I GDGCHC 8 cut(s) 52, 676, 697, 746, 848, 1138, 1399, 1524
Bsp68I TCGCGA 1 cut(s) 960
BspACI CCGC 9 cut(s) 30, 103, 596, 639, 748, 850, 946, 1331, 1442
BspCNI CTCAG 4 cut(s) 370, 802, 1024, 1464
BspFNI CGCG 5 cut(s) 850, 960, 1308, 1329, 1331
BspLI GGNNCC 6 cut(s) 188, 673, 694, 725, 761, 1353
BspMI ACCTGC 3 cut(s) 84, 448, 1378
BspPI GGATC 6 cut(s) 718, 731, 980, 1047, 1197, 1245
BspT104I TTCGAA 1 cut(s) 494
BspT107I GGYRCC 2 cut(s) 671, 692
BspTNI GGTCTC 1 cut(s) 807
BsrBI CCGCTC 1 cut(s) 30
BsrFI RCCGGY 1 cut(s) 389
BsrI ACTGG 5 cut(s) 137, 374, 500, 640, 1506
BssAI RCCGGY 1 cut(s) 389
BssECI CCNNGG 7 cut(s) 153, 223, 442, 697, 873, 1152, 1251
BssT1I CCWWGG 1 cut(s) 442
Bst2UI CCWGG 6 cut(s) 119, 154, 1049, 1198, 1252, 1301
Bst4CI ACNGT 3 cut(s) 917, 953, 1126
Bst6I CTCTTC 2 cut(s) 378, 1263
BstBAI YACGTR 1 cut(s) 53
BstBI TTCGAA 1 cut(s) 494
BstC8I GCNNGC 6 cut(s) 22, 101, 375, 848, 1277, 1444
BstDEI CTNAG 4 cut(s) 378, 810, 1011, 1472
BstDSI CCRYGG 1 cut(s) 697
BstF5I GGATG 7 cut(s) 38, 598, 619, 921, 1107, 1162, 1225
BstFNI CGCG 5 cut(s) 850, 960, 1308, 1329, 1331
BstHHI GCGC 2 cut(s) 572, 1331
BstMAI GTCTC 3 cut(s) 239, 401, 807
BstMCI CGRYCG 1 cut(s) 964
BstMWI GCNNNNNNNGC 4 cut(s) 109, 496, 567, 1157
BstNI CCWGG 6 cut(s) 119, 154, 1049, 1198, 1252, 1301
BstNSI RCATGY 2 cut(s) 313, 578
BstSCI CCNGG 8 cut(s) 117, 152, 222, 872, 1047, 1196, 1250, 1299
BstSLI GKGCMC 4 cut(s) 52, 676, 697, 746
BstUI CGCG 5 cut(s) 850, 960, 1308, 1329, 1331
BstV1I GCAGC 2 cut(s) 1321, 1504
BstV2I GAAGAC 1 cut(s) 663
BstX2I RGATCY 4 cut(s) 516, 723, 985, 1189
BstYI RGATCY 4 cut(s) 516, 723, 985, 1189
BtgI CCRYGG 1 cut(s) 697
BtgZI GCGATG 3 cut(s) 642, 941, 1323
BtrI CACGTC 2 cut(s) 661, 688
BtsCI GGATG 7 cut(s) 38, 598, 619, 921, 1107, 1162, 1225
BtsIMutI CAGTG 7 cut(s) 130, 507, 633, 775, 1131, 1169, 1522
BtuMI TCGCGA 1 cut(s) 960
BveI ACCTGC 3 cut(s) 84, 448, 1378
Cac8I GCNNGC 6 cut(s) 22, 101, 375, 848, 1277, 1444
CfoI GCGC 2 cut(s) 572, 1331
Cfr10I RCCGGY 1 cut(s) 389
Cfr13I GGNCC 5 cut(s) 73, 641, 759, 1248, 1503
CspCI CAANNNNNGTGG 2 cut(s) 441, 476
CviAII CATG 4 cut(s) 310, 404, 575, 788
DdeI CTNAG 4 cut(s) 378, 810, 1011, 1472
DraIII CACNNNGTG 1 cut(s) 136
DriI GACNNNNNGTC 1 cut(s) 79
Eam1104I CTCTTC 2 cut(s) 378, 1263
Eam1105I GACNNNNNGTC 1 cut(s) 79
EarI CTCTTC 2 cut(s) 378, 1263
Eco130I CCWWGG 1 cut(s) 442
Eco147I AGGCCT 1 cut(s) 112
Eco24I GRGCYC 2 cut(s) 848, 1138
Eco31I GGTCTC 1 cut(s) 807
Eco47I GGWCC 3 cut(s) 73, 641, 759
Eco57I CTGAAG 2 cut(s) 1002, 1287
Eco72I CACGTG 1 cut(s) 53
Eco88I CYCGRG 4 cut(s) 420, 826, 858, 1500
EcoO109I RGGNCCY 3 cut(s) 73, 759, 1248
EcoRII CCWGG 6 cut(s) 117, 152, 1047, 1196, 1250, 1299
EcoT14I CCWWGG 1 cut(s) 442
EcoT38I GRGCYC 2 cut(s) 848, 1138
ErhI CCWWGG 1 cut(s) 442
Esp3I CGTCTC 1 cut(s) 239
FaeI CATG 4 cut(s) 313, 407, 578, 791
FalI AAGNNNNNCTT 2 cut(s) 1169, 1201
FaqI GGGAC 2 cut(s) 423, 745
FatI CATG 4 cut(s) 309, 403, 574, 787
FauI CCCGC 4 cut(s) 96, 755, 843, 1435
FauNDI CATATG 1 cut(s) 930
Fnu4HI GCNGC 3 cut(s) 1332, 1335, 1493
FokI GGATG 7 cut(s) 45, 605, 626, 908, 1114, 1169, 1232
FriOI GRGCYC 2 cut(s) 848, 1138
Fsp4HI GCNGC 3 cut(s) 1332, 1335, 1493
FspBI CTAG 1 cut(s) 651
GlaI GCGC 2 cut(s) 571, 1330
GluI GCNGC 3 cut(s) 1332, 1335, 1493
GsuI CTGGAG 2 cut(s) 1025, 1361
HapII CCGG 4 cut(s) 223, 390, 536, 873
HhaI GCGC 2 cut(s) 572, 1331
Hin1II CATG 4 cut(s) 313, 407, 578, 791
Hin6I GCGC 2 cut(s) 570, 1329
HinP1I GCGC 2 cut(s) 570, 1329
HincII GTYRAC 2 cut(s) 834, 1414
HindII GTYRAC 2 cut(s) 834, 1414
HinfI GANTC 4 cut(s) 239, 409, 425, 647
HpaII CCGG 4 cut(s) 223, 390, 536, 873
HphI GGTGA 5 cut(s) 148, 316, 523, 722, 813
Hpy166II GTNNAC 4 cut(s) 307, 744, 834, 1414
Hpy188I TCNGA 4 cut(s) 191, 244, 728, 807
Hpy8I GTNNAC 4 cut(s) 307, 744, 834, 1414
Hpy99I CGWCG 2 cut(s) 689, 1143
HpyAV CCTTC 3 cut(s) 102, 501, 1471
HpyCH4III ACNGT 3 cut(s) 917, 953, 1126
HpyCH4IV ACGT 3 cut(s) 52, 660, 687
HpyCH4V TGCA 9 cut(s) 4, 395, 403, 457, 589, 744, 884, 1034, 1279
HpyF10VI GCNNNNNNNGC 4 cut(s) 109, 496, 567, 1157
HpyF3I CTNAG 4 cut(s) 378, 810, 1011, 1472
HpySE526I ACGT 3 cut(s) 52, 660, 687
Hsp92II CATG 4 cut(s) 313, 407, 578, 791
HspAI GCGC 2 cut(s) 570, 1329
LmnI GCTCC 9 cut(s) 158, 192, 469, 547, 1073, 1111, 1321, 1357, 1465
Lsp1109I GCAGC 2 cut(s) 1321, 1504
LweI GCATC 3 cut(s) 583, 604, 1147
MaeI CTAG 1 cut(s) 651
MaeII ACGT 3 cut(s) 52, 660, 687
MaeIII GTNAC 9 cut(s) 289, 315, 415, 429, 531, 679, 730, 907, 968
MbiI CCGCTC 1 cut(s) 30
MboII GAAGA 7 cut(s) 395, 526, 551, 668, 995, 1280, 1471
MflI RGATCY 4 cut(s) 516, 723, 985, 1189
MhlI GDGCHC 8 cut(s) 52, 676, 697, 746, 848, 1138, 1399, 1524
MluCI AATT 2 cut(s) 40, 1376
MlyI GAGTC 3 cut(s) 248, 403, 656
MmeI TCCRAC 6 cut(s) 103, 582, 1089, 1206, 1266, 1299
MseI TTAA 3 cut(s) 11, 44, 1431
MslI CAYNNNNRTG 1 cut(s) 975
MspA1I CMGCKG 1 cut(s) 610
MspI CCGG 4 cut(s) 223, 390, 536, 873
MspR9I CCNGG 8 cut(s) 119, 154, 224, 874, 1049, 1198, 1252, 1301
MvaI CCWGG 6 cut(s) 119, 154, 1049, 1198, 1252, 1301
MvnI CGCG 5 cut(s) 850, 960, 1308, 1329, 1331
MwoI GCNNNNNNNGC 4 cut(s) 109, 496, 567, 1157
NciI CCSGG 2 cut(s) 224, 874
NdeI CATATG 1 cut(s) 930
NlaIII CATG 4 cut(s) 313, 407, 578, 791
NlaIV GGNNCC 6 cut(s) 188, 673, 694, 725, 761, 1353
NmeAIII GCCGAG 2 cut(s) 466, 1177
NmuCI GTSAC 4 cut(s) 289, 429, 730, 968
NruI TCGCGA 1 cut(s) 960
NspI RCATGY 2 cut(s) 313, 578
NspV TTCGAA 1 cut(s) 494
PaeR7I CTCGAG 2 cut(s) 826, 858
PaqCI CACCTGC 1 cut(s) 448
PceI AGGCCT 1 cut(s) 112
PcsI WCGNNNNNNNCGW 1 cut(s) 1443
PfeI GAWTC 1 cut(s) 425
PfoI TCCNGGA 1 cut(s) 1299
PkrI GCNGC 3 cut(s) 1333, 1336, 1494
Ple19I CGATCG 1 cut(s) 964
PleI GAGTC 3 cut(s) 247, 403, 655
PmaCI CACGTG 1 cut(s) 53
PmlI CACGTG 1 cut(s) 53
PpsI GAGTC 3 cut(s) 247, 403, 655
Ppu21I YACGTR 1 cut(s) 53
PpuMI RGGWCCY 2 cut(s) 73, 759
Psp5II RGGWCCY 2 cut(s) 73, 759
Psp6I CCWGG 6 cut(s) 117, 152, 1047, 1196, 1250, 1299
PspCI CACGTG 1 cut(s) 53
PspGI CCWGG 6 cut(s) 117, 152, 1047, 1196, 1250, 1299
PspN4I GGNNCC 6 cut(s) 188, 673, 694, 725, 761, 1353
PspPI GGNCC 5 cut(s) 73, 641, 759, 1248, 1503
PspPPI RGGWCCY 2 cut(s) 73, 759
PspXI VCTCGAGB 1 cut(s) 826
PsuI RGATCY 4 cut(s) 516, 723, 985, 1189
PvuI CGATCG 1 cut(s) 964
PvuII CAGCTG 1 cut(s) 610
RgaI GCGATCGC 1 cut(s) 964
RruI TCGCGA 1 cut(s) 960
RseI CAYNNNNRTG 1 cut(s) 975
SaqAI TTAA 3 cut(s) 11, 44, 1431
SatI GCNGC 3 cut(s) 1332, 1335, 1493
Sau96I GGNCC 5 cut(s) 73, 641, 759, 1248, 1503
SchI GAGTC 3 cut(s) 248, 403, 656
ScrFI CCNGG 8 cut(s) 119, 154, 224, 874, 1049, 1198, 1252, 1301
SduI GDGCHC 8 cut(s) 52, 676, 697, 746, 848, 1138, 1399, 1524
SfaAI GCGATCGC 1 cut(s) 964
SfaNI GCATC 3 cut(s) 583, 604, 1147
Sfr274I CTCGAG 2 cut(s) 826, 858
SfuI TTCGAA 1 cut(s) 494
SgfI GCGATCGC 1 cut(s) 964
SinI GGWCC 3 cut(s) 73, 641, 759
SlaI CTCGAG 2 cut(s) 826, 858
SmiMI CAYNNNNRTG 1 cut(s) 975
SmlI CTYRAG 3 cut(s) 411, 826, 858
SmoI CTYRAG 3 cut(s) 411, 826, 858
Sse9I AATT 2 cut(s) 40, 1376
SseBI AGGCCT 1 cut(s) 112
SsiI CCGC 9 cut(s) 30, 103, 596, 639, 748, 850, 946, 1331, 1442
SspI AATATT 2 cut(s) 349, 1429
SspMI CTAG 1 cut(s) 651
StuI AGGCCT 1 cut(s) 112
StyD4I CCNGG 8 cut(s) 117, 152, 222, 872, 1047, 1196, 1250, 1299
StyI CCWWGG 1 cut(s) 442
TaaI ACNGT 3 cut(s) 917, 953, 1126
TaiI ACGT 3 cut(s) 55, 663, 690
TaqI TCGA 6 cut(s) 494, 780, 827, 859, 1366, 1437
TasI AATT 2 cut(s) 40, 1376
TauI GCSGC 1 cut(s) 1334
TfiI GAWTC 1 cut(s) 425
Tru1I TTAA 3 cut(s) 11, 44, 1431
Tru9I TTAA 3 cut(s) 11, 44, 1431
TscAI CASTG 6 cut(s) 137, 507, 640, 775, 1131, 1176
TseFI GTSAC 4 cut(s) 289, 429, 730, 968
TseI GCWGC 2 cut(s) 1334, 1492
Tsp45I GTSAC 4 cut(s) 289, 429, 730, 968
TspGWI ACGGA 1 cut(s) 511
TspRI CASTG 6 cut(s) 137, 507, 640, 775, 1131, 1176
VneI GTGCAC 1 cut(s) 742
VpaK11BI GGWCC 3 cut(s) 73, 641, 759
XapI RAATTY 1 cut(s) 40
XbaI TCTAGA 1 cut(s) 650
XceI RCATGY 2 cut(s) 313, 578
XcmI CCANNNNNNNNNTGG 1 cut(s) 352
XhoI CTCGAG 2 cut(s) 826, 858
XspI CTAG 1 cut(s) 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.