Rmu_sc0003441.1_g000018

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003441.1
OG0000075
Physical Location & Seq
Reverse (-)
57921 .. 59112
1192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003441.1_g000018.1.cds

Sequence Viewer

Length: 849 bp
ctgggcgagattgggatcactaatggcgccatcgttcatatggtggctgacctctggaactgttatcgcaaccgcagtcgtgtgaataccgaggatccgagtctcgggtatcgggaggctcaggagaggttgatgagggctgtgaacttgaattatcatgcttcggccgagttggtggatcattttgatcgggaaatagcgcaacttcagggggagctggaggccaagaggaattggtcgcgcgagcttcagaatgcattagaccagggccaagtagagcatgaggatcttaggctagccatcgatgatgggatcgagaggaggatggagctggaaagggcgctggccatagagggggcttgtcgtcaagaggctgaggatgccttggagcttcgagctgcggccttggagagtttggctccctatttggacggtgtggtggacctggaggggcaggttgggaatctgcagagggaggtggaccgtttacgggatgtggagctagaggcaggcgagagggaggtggagatggagcggctgaggaaggagttagcctgggagcgaacacgatcaagtgacttcgccgaagattgtctccgcctgcgcgctgctgccgagacgcaccgggataagctcaccaaggctaggtgggatggtgcaaatagggccgaggagatggtgcgagatatgcaggccaagaaggccgcgagattgcaaactagcgcggcaagtggtgatcgaggtccggggattgtgatccgggactcggttgtatcggagcctacaccgggtcaagctggtgatcgcgaggcgggtgatgctactggcgagcaaagggccgatggttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

282

Amino Acids

31.64

Weight (kDa)

4.81

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 445
AccB1I GGYRCC 1 cut(s) 26
AccBSI CCGCTC 1 cut(s) 535
AccII CGCG 6 cut(s) 241, 243, 606, 707, 725, 807
AciI CCGC 7 cut(s) 73, 401, 535, 598, 705, 725, 812
AclWI GGATC 7 cut(s) 23, 89, 102, 186, 294, 320, 751
AcoI YGGCCR 2 cut(s) 165, 345
AcuI CTGAAG 2 cut(s) 191, 233
AcyI GRCGYC 1 cut(s) 27
AfiI CCNNNNNNNGG 6 cut(s) 104, 354, 490, 645, 766, 788
AgsI TTSAA 1 cut(s) 151
AjnI CCWGG 3 cut(s) 264, 444, 554
AluBI AGCT 8 cut(s) 217, 247, 331, 391, 398, 502, 634, 797
AluI AGCT 8 cut(s) 217, 247, 331, 391, 398, 502, 634, 797
Alw26I GTCTC 3 cut(s) 107, 599, 611
AlwI GGATC 7 cut(s) 23, 89, 102, 186, 294, 320, 751
Ama87I CYCGRG 1 cut(s) 104
AoxI GGCC 9 cut(s) 165, 222, 268, 345, 402, 666, 693, 702, 837
ApeKI GCWGC 3 cut(s) 398, 608, 611
AspLEI GCGC 7 cut(s) 29, 202, 243, 343, 606, 608, 725
AspS9I GGNCC 6 cut(s) 268, 442, 481, 666, 743, 837
AsuC2I CCSGG 4 cut(s) 626, 747, 761, 789
AsuHPI GGTGA 4 cut(s) 628, 746, 812, 827
AsuNHI GCTAGC 1 cut(s) 295
AvaI CYCGRG 1 cut(s) 104
AvaII GGWCC 3 cut(s) 442, 481, 743
BalI TGGCCA 1 cut(s) 347
BamHI GGATCC 1 cut(s) 94
BanI GGYRCC 1 cut(s) 26
BbvCI CCTCAGC 2 cut(s) 375, 539
BbvI GCAGC 3 cut(s) 385, 595, 598
BccI CCATC 8 cut(s) 38, 302, 308, 319, 523, 647, 670, 836
BciT130I CCWGG 3 cut(s) 266, 446, 556
BcnI CCSGG 4 cut(s) 626, 747, 761, 789
BcoDI GTCTC 3 cut(s) 107, 599, 611
BfaI CTAG 4 cut(s) 296, 503, 645, 720
BfmI CTRYAG 1 cut(s) 467
BfoI RGCGCY 2 cut(s) 30, 344
BfuAI ACCTGC 1 cut(s) 445
BglI GCCNNNNNGGC 1 cut(s) 701
BisI GCNGC 7 cut(s) 399, 402, 536, 609, 612, 705, 726
BlsI GCNGC 7 cut(s) 400, 403, 537, 610, 613, 706, 727
Bme1390I CCNGG 7 cut(s) 266, 446, 556, 626, 747, 761, 789
Bme18I GGWCC 3 cut(s) 442, 481, 743
BmeT110I CYCGRG 1 cut(s) 104
BmgT120I GGNCC 6 cut(s) 268, 442, 481, 666, 743, 837
BmiI GGNNCC 4 cut(s) 28, 96, 420, 780
BmrFI CCNGG 7 cut(s) 266, 446, 556, 626, 747, 761, 789
BmsI GCATC 2 cut(s) 370, 808
BmtI GCTAGC 1 cut(s) 299
BplI GAGNNNNNCTC 2 cut(s) 403, 435
BpmI CTGGAG 2 cut(s) 239, 467
Bpu10I CCTNAGC 3 cut(s) 120, 375, 539
BpuMI CCSGG 4 cut(s) 626, 747, 761, 789
Bsa29I ATCGAT 1 cut(s) 303
BsaBI GATNNNNATC 2 cut(s) 14, 755
BsaHI GRCGYC 1 cut(s) 27
BsaJI CCNNGG 8 cut(s) 90, 265, 384, 405, 555, 639, 669, 746
Bsc4I CCNNNNNNNGG 6 cut(s) 104, 354, 490, 645, 766, 788
Bse1I ACTGG 1 cut(s) 829
Bse8I GATNNNNATC 2 cut(s) 14, 755
BseBI CCWGG 3 cut(s) 266, 446, 556
BseCI ATCGAT 1 cut(s) 303
BseDI CCNNGG 8 cut(s) 90, 265, 384, 405, 555, 639, 669, 746
BseGI GGATG 4 cut(s) 330, 385, 499, 658
BseJI GATNNNNATC 2 cut(s) 14, 755
BseLI CCNNNNNNNGG 6 cut(s) 104, 354, 490, 645, 766, 788
BseMII CTCAG 3 cut(s) 134, 366, 530
BseNI ACTGG 1 cut(s) 829
BsePI GCGCGC 1 cut(s) 604
BseRI GAGGAG 2 cut(s) 334, 686
BseX3I CGGCCG 1 cut(s) 165
BseXI GCAGC 3 cut(s) 385, 595, 598
Bsh1236I CGCG 6 cut(s) 241, 243, 606, 707, 725, 807
Bsh1285I CGRYCG 1 cut(s) 168
BshFI GGCC 9 cut(s) 167, 224, 270, 347, 404, 668, 695, 704, 839
BshNI GGYRCC 1 cut(s) 26
BshVI ATCGAT 1 cut(s) 303
BsiEI CGRYCG 1 cut(s) 168
BsiHKCI CYCGRG 1 cut(s) 104
BsiSI CCGG 4 cut(s) 625, 746, 760, 788
BslFI GGGAC 1 cut(s) 776
BslI CCNNNNNNNGG 6 cut(s) 104, 354, 490, 645, 766, 788
BsmAI GTCTC 3 cut(s) 107, 599, 611
BsmBI CGTCTC 1 cut(s) 611
BsmFI GGGAC 1 cut(s) 776
BsmI GAATGC 1 cut(s) 259
BsnI GGCC 9 cut(s) 167, 224, 270, 347, 404, 668, 695, 704, 839
BsoBI CYCGRG 1 cut(s) 104
Bsp68I TCGCGA 1 cut(s) 807
BspACI CCGC 7 cut(s) 73, 401, 535, 598, 705, 725, 812
BspANI GGCC 9 cut(s) 167, 224, 270, 347, 404, 668, 695, 704, 839
BspCNI CTCAG 3 cut(s) 133, 367, 531
BspDI ATCGAT 1 cut(s) 303
BspFNI CGCG 6 cut(s) 241, 243, 606, 707, 725, 807
BspLI GGNNCC 4 cut(s) 28, 96, 420, 780
BspMAI CTGCAG 1 cut(s) 471
BspMI ACCTGC 1 cut(s) 445
BspOI GCTAGC 1 cut(s) 299
BspPI GGATC 7 cut(s) 23, 89, 102, 186, 294, 320, 751
BspT107I GGYRCC 1 cut(s) 26
BsrBI CCGCTC 1 cut(s) 535
BsrI ACTGG 1 cut(s) 829
BssECI CCNNGG 8 cut(s) 90, 265, 384, 405, 555, 639, 669, 746
BssHII GCGCGC 1 cut(s) 604
BssNI GRCGYC 1 cut(s) 27
BssT1I CCWWGG 3 cut(s) 384, 405, 639
Bst2UI CCWGG 3 cut(s) 266, 446, 556
Bst4CI ACNGT 3 cut(s) 62, 434, 485
BstACI GRCGYC 1 cut(s) 27
BstC8I GCNNGC 8 cut(s) 245, 297, 345, 511, 602, 606, 693, 830
BstDEI CTNAG 4 cut(s) 120, 290, 375, 539
BstF5I GGATG 4 cut(s) 330, 385, 499, 658
BstFNI CGCG 6 cut(s) 241, 243, 606, 707, 725, 807
BstH2I RGCGCY 2 cut(s) 30, 344
BstHHI GCGC 7 cut(s) 29, 202, 243, 343, 606, 608, 725
BstMAI GTCTC 3 cut(s) 107, 599, 611
BstMCI CGRYCG 1 cut(s) 168
BstMWI GCNNNNNNNGC 5 cut(s) 380, 665, 688, 701, 818
BstNI CCWGG 3 cut(s) 266, 446, 556
BstSCI CCNGG 7 cut(s) 264, 444, 554, 624, 745, 759, 787
BstSFI CTRYAG 1 cut(s) 467
BstUI CGCG 6 cut(s) 241, 243, 606, 707, 725, 807
BstV1I GCAGC 3 cut(s) 385, 595, 598
BstX2I RGATCY 2 cut(s) 94, 286
BstYI RGATCY 2 cut(s) 94, 286
BstZI CGGCCG 1 cut(s) 165
Bsu15I ATCGAT 1 cut(s) 303
BsuRI GGCC 9 cut(s) 167, 224, 270, 347, 404, 668, 695, 704, 839
BsuTUI ATCGAT 1 cut(s) 303
BtsCI GGATG 4 cut(s) 330, 385, 499, 658
BtuMI TCGCGA 1 cut(s) 807
BveI ACCTGC 1 cut(s) 445
Cac8I GCNNGC 8 cut(s) 245, 297, 345, 511, 602, 606, 693, 830
CfoI GCGC 7 cut(s) 29, 202, 243, 343, 606, 608, 725
Cfr13I GGNCC 6 cut(s) 268, 442, 481, 666, 743, 837
ClaI ATCGAT 1 cut(s) 303
CseI GACGC 1 cut(s) 628
CviAII CATG 2 cut(s) 158, 281
DdeI CTNAG 4 cut(s) 120, 290, 375, 539
DinI GGCGCC 1 cut(s) 28
EaeI YGGCCR 2 cut(s) 165, 345
EagI CGGCCG 1 cut(s) 165
EciI GGCGGA 1 cut(s) 587
EclXI CGGCCG 1 cut(s) 165
Eco130I CCWWGG 3 cut(s) 384, 405, 639
Eco47I GGWCC 3 cut(s) 442, 481, 743
Eco52I CGGCCG 1 cut(s) 165
Eco57I CTGAAG 2 cut(s) 191, 233
Eco88I CYCGRG 1 cut(s) 104
EcoRII CCWGG 3 cut(s) 264, 444, 554
EcoT14I CCWWGG 3 cut(s) 384, 405, 639
EcoT22I ATGCAT 1 cut(s) 259
EgeI GGCGCC 1 cut(s) 28
EheI GGCGCC 1 cut(s) 28
ErhI CCWWGG 3 cut(s) 384, 405, 639
Esp3I CGTCTC 1 cut(s) 611
FaeI CATG 2 cut(s) 161, 284
FaiI YATR 6 cut(s) 39, 41, 159, 282, 350, 689
FaqI GGGAC 1 cut(s) 776
FatI CATG 2 cut(s) 157, 280
FauI CCCGC 1 cut(s) 805
FauNDI CATATG 1 cut(s) 39
Fnu4HI GCNGC 7 cut(s) 399, 402, 536, 609, 612, 705, 726
FokI GGATG 4 cut(s) 337, 392, 506, 665
Fsp4HI GCNGC 7 cut(s) 399, 402, 536, 609, 612, 705, 726
FspBI CTAG 4 cut(s) 296, 503, 645, 720
GlaI GCGC 7 cut(s) 28, 201, 242, 342, 605, 607, 724
GluI GCNGC 7 cut(s) 399, 402, 536, 609, 612, 705, 726
GsuI CTGGAG 2 cut(s) 239, 467
HaeII RGCGCY 2 cut(s) 30, 344
HaeIII GGCC 9 cut(s) 167, 224, 270, 347, 404, 668, 695, 704, 839
HapII CCGG 4 cut(s) 625, 746, 760, 788
HgaI GACGC 1 cut(s) 628
HhaI GCGC 7 cut(s) 29, 202, 243, 343, 606, 608, 725
Hin1I GRCGYC 1 cut(s) 27
Hin1II CATG 2 cut(s) 161, 284
Hin6I GCGC 7 cut(s) 27, 200, 241, 341, 604, 606, 723
HinP1I GCGC 7 cut(s) 27, 200, 241, 341, 604, 606, 723
HinfI GANTC 3 cut(s) 100, 463, 764
HpaII CCGG 4 cut(s) 625, 746, 760, 788
HphI GGTGA 4 cut(s) 628, 746, 812, 827
Hpy166II GTNNAC 4 cut(s) 145, 442, 481, 488
Hpy188I TCNGA 3 cut(s) 99, 252, 778
Hpy188III TCNNGA 7 cut(s) 55, 113, 122, 191, 316, 368, 806
Hpy8I GTNNAC 4 cut(s) 145, 442, 481, 488
HpyAV CCTTC 2 cut(s) 538, 694
HpyCH4III ACNGT 3 cut(s) 62, 434, 485
HpyCH4V TGCA 5 cut(s) 257, 469, 659, 691, 715
HpyF10VI GCNNNNNNNGC 5 cut(s) 380, 665, 688, 701, 818
HpyF3I CTNAG 4 cut(s) 120, 290, 375, 539
Hsp92I GRCGYC 1 cut(s) 27
Hsp92II CATG 2 cut(s) 161, 284
HspAI GCGC 7 cut(s) 27, 200, 241, 341, 604, 606, 723
KasI GGCGCC 1 cut(s) 26
LmnI GCTCC 8 cut(s) 214, 328, 388, 424, 499, 532, 559, 778
Lsp1109I GCAGC 3 cut(s) 385, 595, 598
LweI GCATC 2 cut(s) 370, 808
MaeI CTAG 4 cut(s) 296, 503, 645, 720
MaeIII GTNAC 1 cut(s) 575
MbiI CCGCTC 1 cut(s) 535
MboII GAAGA 1 cut(s) 599
MflI RGATCY 2 cut(s) 94, 286
MlsI TGGCCA 1 cut(s) 347
MluCI AATT 2 cut(s) 151, 232
MluNI TGGCCA 1 cut(s) 347
Mly113I GGCGCC 1 cut(s) 27
MlyI GAGTC 2 cut(s) 109, 758
Mox20I TGGCCA 1 cut(s) 347
Mph1103I ATGCAT 1 cut(s) 259
MscI TGGCCA 1 cut(s) 347
MseI TTAA 1 cut(s) 847
Msp20I TGGCCA 1 cut(s) 347
MspI CCGG 4 cut(s) 625, 746, 760, 788
MspR9I CCNGG 7 cut(s) 266, 446, 556, 626, 747, 761, 789
Mva1269I GAATGC 1 cut(s) 259
MvaI CCWGG 3 cut(s) 266, 446, 556
MvnI CGCG 6 cut(s) 241, 243, 606, 707, 725, 807
MwoI GCNNNNNNNGC 5 cut(s) 380, 665, 688, 701, 818
NarI GGCGCC 1 cut(s) 27
NciI CCSGG 4 cut(s) 626, 747, 761, 789
NdeI CATATG 1 cut(s) 39
NheI GCTAGC 1 cut(s) 295
NlaIII CATG 2 cut(s) 161, 284
NlaIV GGNNCC 4 cut(s) 28, 96, 420, 780
NmeAIII GCCGAG 3 cut(s) 193, 640, 694
NmuCI GTSAC 1 cut(s) 575
NruI TCGCGA 1 cut(s) 807
NsiI ATGCAT 1 cut(s) 259
PauI GCGCGC 1 cut(s) 604
PctI GAATGC 1 cut(s) 259
PfeI GAWTC 1 cut(s) 463
PfoI TCCNGGA 1 cut(s) 759
PkrI GCNGC 7 cut(s) 400, 403, 537, 610, 613, 706, 727
PleI GAGTC 2 cut(s) 108, 758
PluTI GGCGCC 1 cut(s) 30
PpsI GAGTC 2 cut(s) 108, 758
Psp6I CCWGG 3 cut(s) 264, 444, 554
PspGI CCWGG 3 cut(s) 264, 444, 554
PspN4I GGNNCC 4 cut(s) 28, 96, 420, 780
PspPI GGNCC 6 cut(s) 268, 442, 481, 666, 743, 837
PstI CTGCAG 1 cut(s) 471
PsuI RGATCY 2 cut(s) 94, 286
PteI GCGCGC 1 cut(s) 604
RruI TCGCGA 1 cut(s) 807
SaqAI TTAA 1 cut(s) 847
SatI GCNGC 7 cut(s) 399, 402, 536, 609, 612, 705, 726
Sau96I GGNCC 6 cut(s) 268, 442, 481, 666, 743, 837
SchI GAGTC 2 cut(s) 109, 758
ScrFI CCNGG 7 cut(s) 266, 446, 556, 626, 747, 761, 789
SfaNI GCATC 2 cut(s) 370, 808
SfcI CTRYAG 1 cut(s) 467
SfiI GGCCNNNNNGGCC 1 cut(s) 701
SfoI GGCGCC 1 cut(s) 28
SinI GGWCC 3 cut(s) 442, 481, 743
Sse9I AATT 2 cut(s) 151, 232
SsiI CCGC 7 cut(s) 73, 401, 535, 598, 705, 725, 812
SspDI GGCGCC 1 cut(s) 26
SspMI CTAG 4 cut(s) 296, 503, 645, 720
StyD4I CCNGG 7 cut(s) 264, 444, 554, 624, 745, 759, 787
StyI CCWWGG 3 cut(s) 384, 405, 639
TaaI ACNGT 3 cut(s) 62, 434, 485
TaqI TCGA 4 cut(s) 303, 315, 394, 739
TasI AATT 2 cut(s) 151, 232
TauI GCSGC 4 cut(s) 404, 538, 707, 728
TfiI GAWTC 1 cut(s) 463
Tru1I TTAA 1 cut(s) 847
Tru9I TTAA 1 cut(s) 847
TseFI GTSAC 1 cut(s) 575
TseI GCWGC 3 cut(s) 398, 608, 611
Tsp45I GTSAC 1 cut(s) 575
TspDTI ATGAA 1 cut(s) 26
VpaK11BI GGWCC 3 cut(s) 442, 481, 743
XcmI CCANNNNNNNNNTGG 1 cut(s) 37
XspI CTAG 4 cut(s) 296, 503, 645, 720
Zsp2I ATGCAT 1 cut(s) 259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.