Rmu_sc0025769.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025769.1
OG0000075
Physical Location & Seq
Forward (+)
7777 .. 10457
2681 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0025769.1_g000004.1.cds

Sequence Viewer

Length: 1743 bp
atggcgtgggagcatcgtagtcatggtaggcgagagggttcatcttgtagaggtggtgaaggagcttctcatggagatggcgtgggcgcttctcacaagcttggtgacagtgcccctcagggaggggccgtgggctcttcccgaggtggtagtgaaggtgtctctcgtagaggtacagtgggcgcttccagaggtcgcagcgaaggtgtttctcgaggtggtgaagggtcctcgcgtggggtcccaagtagggttgagcgtgttgcaggccccgaggttccccaggtggaagaagttgaggtgttggagattactcgttcgccaggagctgtagtatctgttgtcgtgcctgaatgtatagttagggcagctatagccaaatgcactaagtactcgaccaagggtggtgatagtggatgtattaattttagggcgcgtggccgtgcagttatcgaggacctggcgtcaaacatttatgctcgttggcggaggaggccttgcctggttagaggcctttggcagaacccggacatggtgcatcaggaggttgacctgaccacgttggagcagaagcgcgtggccagggtgatgggtgcatttcccaggggagcgaagtggttctatcgcctgtgtaggctctcgatatatgagaagtttaatctggggaggcgtccggtagtcatgttgaatgaggcttcgagcaagagtgatgagccctacacggaggtggatatagatgttattattagagagttgttgcgagaatcggagacagcaaggcgggttgacatcgatcttcctaagaaagttcgtgtgaccgatcatcgggtgaacatgcagttgcccgacgagatgtatctgaggtttcctgctgtggagccggtggtcgaggtggagatctccatcaatgagttgcttgaagaagtggagcaacgccaaagcgatactagtgctcggactcgcctggtgcaggatacggtgttggaacagttggaggctatatttagtgatgacattggcggtccaatctcgcgagaggttattactgttaacagtggggaagcggatcccgagtctggagaaggcatggttgagggtacccaagttgctgagatgaggacccatgttcagcttcttctcgggagtcccccagttggcgtcgacatcgatactcgtgggggcaagaagtctcgggttgataatgtatcgcacttgagatctacaagtaggggctcgtggggttctctcgatgaagttgcagggggtctcgcgcgtaccctgggcgagattggagtcattgatggtgccatacttcatatggttgccgacttgcagaattaccatcgcgatcgcagtcgtgtgactgatgagtatcctcgcctggggtattgggaggctcaggagaggctgatgagggctgtgaacatgaattaccatgcctctgtcgaattggtagcccactttgatctggagatagcccgactgcagggggagctaaatgccaagagggaatgggcacgtgagcctcataatgcattggaacaaggccaggtaaagcacgaggacatgaggtgtgtgattgatgacaggatcgcgagacagatggagttggagcgagcactagcagtggagagggcccgtcgtcaggaggccgagaatgttatcgcttcactgagagagtccaacctggatctaattgggaagctgcagcaggtggaggatggcctgaaggctttggattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

580

Amino Acids

64.22

Weight (kDa)

5.83

Isoelectric Point (pI)

47.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1702
Acc36I ACCTGC 1 cut(s) 1702
Acc65I GGTACC 1 cut(s) 1097
AccB1I GGYRCC 2 cut(s) 1097, 1304
AccI GTMKAC 1 cut(s) 1161
AccII CGCG 8 cut(s) 235, 436, 576, 1033, 1271, 1273, 1347, 1595
AciI CCGC 4 cut(s) 487, 781, 1020, 1064
AclWI GGATC 4 cut(s) 1061, 1074, 1598, 1698
AcoI YGGCCR 2 cut(s) 439, 579
AcvI CACGTG 1 cut(s) 1520
AcyI GRCGYC 3 cut(s) 464, 670, 1158
AfaI GTAC 4 cut(s) 175, 392, 1099, 1276
AgsI TTSAA 2 cut(s) 688, 920
AhdI GACNNNNNGTC 1 cut(s) 463
AhlI ACTAGT 1 cut(s) 947
AleI CACNNNNGTG 1 cut(s) 725
AluBI AGCT 7 cut(s) 65, 100, 329, 371, 1132, 1495, 1705
AluI AGCT 7 cut(s) 65, 100, 329, 371, 1132, 1495, 1705
Alw21I GWGCWC 2 cut(s) 955, 1621
Alw26I GTCTC 5 cut(s) 166, 764, 1194, 1271, 1591
AlwI GGATC 4 cut(s) 1061, 1074, 1598, 1698
AlwNI CAGNNNCTG 1 cut(s) 329
Ama87I CYCGRG 6 cut(s) 141, 213, 272, 1070, 1139, 1191
ApaI GGGCCC 1 cut(s) 1639
ApeKI GCWGC 4 cut(s) 198, 368, 1705, 1708
AseI ATTAAT 1 cut(s) 423
AsiSI GCGATCGC 1 cut(s) 1351
Asp700I GAANNNNTTC 1 cut(s) 617
Asp718I GGTACC 1 cut(s) 1097
AspLEI GCGC 5 cut(s) 89, 185, 436, 576, 1273
AspS9I GGNCC 9 cut(s) 126, 228, 241, 269, 457, 1022, 1119, 1635, 1636
AsuC2I CCSGG 1 cut(s) 527
AsuHPI GGTGA 6 cut(s) 68, 116, 233, 419, 598, 841
AvaI CYCGRG 6 cut(s) 141, 213, 272, 1070, 1139, 1191
AvaII GGWCC 5 cut(s) 228, 241, 457, 1022, 1119
AxyI CCTNAGG 1 cut(s) 117
BaeGI GKGCMC 3 cut(s) 115, 1519, 1639
BaeI ACNNNNGTAYC 2 cut(s) 1089, 1122
BalI TGGCCA 1 cut(s) 581
BamHI GGATCC 1 cut(s) 1066
BanI GGYRCC 2 cut(s) 1097, 1304
BanII GRGCYC 4 cut(s) 137, 717, 1235, 1639
BauI CACGAG 3 cut(s) 1173, 1234, 1559
BbrPI CACGTG 1 cut(s) 1520
Bbv12I GWGCWC 2 cut(s) 955, 1621
BbvI GCAGC 4 cut(s) 210, 380, 1692, 1720
BccI CCATC 7 cut(s) 71, 583, 911, 1295, 1350, 1597, 1715
BceAI ACGGC 2 cut(s) 113, 426
BcgI CGANNNNNNTGC 4 cut(s) 932, 966, 1238, 1272
BciVI GTATCC 2 cut(s) 967, 1383
BcnI CCSGG 1 cut(s) 527
BcoDI GTCTC 5 cut(s) 166, 764, 1194, 1271, 1591
BcuI ACTAGT 1 cut(s) 947
BfaI CTAG 2 cut(s) 948, 1622
BfmI CTRYAG 4 cut(s) 330, 372, 1484, 1706
BfoI RGCGCY 2 cut(s) 90, 186
BfuAI ACCTGC 1 cut(s) 1702
BfuI GTATCC 2 cut(s) 967, 1383
BglII AGATCT 2 cut(s) 897, 1217
BisI GCNGC 4 cut(s) 199, 369, 1706, 1709
BlsI GCNGC 4 cut(s) 200, 370, 1707, 1710
BmcAI AGTACT 1 cut(s) 392
Bme18I GGWCC 5 cut(s) 228, 241, 457, 1022, 1119
BmeRI GACNNNNNGTC 1 cut(s) 463
BmeT110I CYCGRG 6 cut(s) 141, 213, 272, 1070, 1139, 1191
BmgT120I GGNCC 9 cut(s) 126, 228, 241, 269, 457, 1022, 1119, 1635, 1636
BmrI ACTGGG 1 cut(s) 1145
BmsI GCATC 2 cut(s) 22, 547
BmuI ACTGGG 1 cut(s) 1145
BpmI CTGGAG 2 cut(s) 1098, 1490
Bpu10I CCTNAGC 1 cut(s) 1398
BpuEI CTTGAG 1 cut(s) 1234
BpuMI CCSGG 1 cut(s) 527
Bsa29I ATCGAT 2 cut(s) 792, 1167
BsaAI YACGTR 1 cut(s) 1520
BsaBI GATNNNNATC 2 cut(s) 902, 1371
BsaHI GRCGYC 3 cut(s) 464, 670, 1158
BsaI GGTCTC 1 cut(s) 1271
BsaWI WCCGGW 1 cut(s) 673
BsaXI ACNNNNNCTCC 6 cut(s) 66, 96, 114, 144, 318, 348
Bse118I RCCGGY 1 cut(s) 880
Bse1I ACTGG 1 cut(s) 1151
Bse21I CCTNAGG 1 cut(s) 117
Bse8I GATNNNNATC 2 cut(s) 902, 1371
BseCI ATCGAT 2 cut(s) 792, 1167
BseGI GGATG 2 cut(s) 422, 1726
BseJI GATNNNNATC 2 cut(s) 902, 1371
BseMII CTCAG 5 cut(s) 131, 851, 1101, 1412, 1664
BseNI ACTGG 1 cut(s) 1151
BseRI GAGGAG 1 cut(s) 505
BseSI GKGCMC 3 cut(s) 115, 1519, 1639
BseXI GCAGC 4 cut(s) 210, 380, 1692, 1720
BsgI GTGCAG 2 cut(s) 465, 989
Bsh1236I CGCG 8 cut(s) 235, 436, 576, 1033, 1271, 1273, 1347, 1595
Bsh1285I CGRYCG 1 cut(s) 1351
BshNI GGYRCC 2 cut(s) 1097, 1304
BshVI ATCGAT 2 cut(s) 792, 1167
BsiEI CGRYCG 1 cut(s) 1351
BsiHKAI GWGCWC 2 cut(s) 955, 1621
BsiHKCI CYCGRG 6 cut(s) 141, 213, 272, 1070, 1139, 1191
BsiSI CCGG 3 cut(s) 527, 674, 881
BslFI GGGAC 2 cut(s) 227, 1131
BsmAI GTCTC 5 cut(s) 166, 764, 1194, 1271, 1591
BsmFI GGGAC 2 cut(s) 227, 1131
Bso31I GGTCTC 1 cut(s) 1271
BsoBI CYCGRG 6 cut(s) 141, 213, 272, 1070, 1139, 1191
Bsp120I GGGCCC 1 cut(s) 1635
Bsp1286I GDGCHC 8 cut(s) 115, 137, 717, 955, 1235, 1519, 1621, 1639
Bsp143I GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
Bsp68I TCGCGA 3 cut(s) 1033, 1347, 1595
BspACI CCGC 4 cut(s) 487, 781, 1020, 1064
BspCNI CTCAG 5 cut(s) 130, 852, 1102, 1411, 1665
BspDI ATCGAT 2 cut(s) 792, 1167
BspFNI CGCG 8 cut(s) 235, 436, 576, 1033, 1271, 1273, 1347, 1595
BspMAI CTGCAG 2 cut(s) 1488, 1710
BspMI ACCTGC 1 cut(s) 1702
BspPI GGATC 4 cut(s) 1061, 1074, 1598, 1698
BspQI GCTCTTC 1 cut(s) 142
BspT107I GGYRCC 2 cut(s) 1097, 1304
BspTNI GGTCTC 1 cut(s) 1271
BsrFI RCCGGY 1 cut(s) 880
BsrI ACTGG 1 cut(s) 1151
BssAI RCCGGY 1 cut(s) 880
BssMI GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
BssNI GRCGYC 3 cut(s) 464, 670, 1158
BssSI CACGAG 3 cut(s) 1173, 1234, 1559
BssT1I CCWWGG 1 cut(s) 399
Bst2BI CACGAG 3 cut(s) 1173, 1234, 1559
Bst4CI ACNGT 6 cut(s) 110, 178, 979, 990, 1048, 1055
Bst6I CTCTTC 1 cut(s) 142
BstACI GRCGYC 3 cut(s) 464, 670, 1158
BstBAI YACGTR 1 cut(s) 1520
BstC8I GCNNGC 2 cut(s) 268, 1617
BstDEI CTNAG 7 cut(s) 117, 387, 801, 860, 1110, 1398, 1673
BstDSI CCRYGG 1 cut(s) 129
BstENI CCTNNNNNAGG 2 cut(s) 120, 968
BstF5I GGATG 2 cut(s) 422, 1726
BstFNI CGCG 8 cut(s) 235, 436, 576, 1033, 1271, 1273, 1347, 1595
BstH2I RGCGCY 2 cut(s) 90, 186
BstHHI GCGC 5 cut(s) 89, 185, 436, 576, 1273
BstKTI GATC 9 cut(s) 796, 823, 900, 1069, 1220, 1351, 1468, 1593, 1693
BstMAI GTCTC 5 cut(s) 166, 764, 1194, 1271, 1591
BstMBI GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
BstMCI CGRYCG 1 cut(s) 1351
BstMWI GCNNNNNNNGC 3 cut(s) 374, 493, 1492
BstNSI RCATGY 1 cut(s) 838
BstSFI CTRYAG 4 cut(s) 330, 372, 1484, 1706
BstSLI GKGCMC 3 cut(s) 115, 1519, 1639
BstUI CGCG 8 cut(s) 235, 436, 576, 1033, 1271, 1273, 1347, 1595
BstV1I GCAGC 4 cut(s) 210, 380, 1692, 1720
BstX2I RGATCY 4 cut(s) 897, 1066, 1217, 1690
BstXI CCANNNNNNTGG 1 cut(s) 589
BstYI RGATCY 4 cut(s) 897, 1066, 1217, 1690
Bsu15I ATCGAT 2 cut(s) 792, 1167
Bsu36I CCTNAGG 1 cut(s) 117
BsuI GTATCC 2 cut(s) 967, 1383
BsuTUI ATCGAT 2 cut(s) 792, 1167
BtgI CCRYGG 1 cut(s) 129
BtgZI GCGATG 1 cut(s) 1328
BtsCI GGATG 2 cut(s) 422, 1726
BtsI GCAGTG 1 cut(s) 1632
BtsIMutI CAGTG 5 cut(s) 115, 183, 1060, 1632, 1670
BtuMI TCGCGA 3 cut(s) 1033, 1347, 1595
BveI ACCTGC 1 cut(s) 1702
Cac8I GCNNGC 2 cut(s) 268, 1617
CaiI CAGNNNCTG 1 cut(s) 329
CfoI GCGC 5 cut(s) 89, 185, 436, 576, 1273
Cfr10I RCCGGY 1 cut(s) 880
Cfr13I GGNCC 9 cut(s) 126, 228, 241, 269, 457, 1022, 1119, 1635, 1636
ClaI ATCGAT 2 cut(s) 792, 1167
CseI GACGC 3 cut(s) 453, 659, 1147
Csp6I GTAC 4 cut(s) 174, 391, 1098, 1275
CviQI GTAC 4 cut(s) 174, 391, 1098, 1275
DdeI CTNAG 7 cut(s) 117, 387, 801, 860, 1110, 1398, 1673
DpnI GATC 9 cut(s) 795, 822, 899, 1068, 1219, 1350, 1467, 1592, 1692
DpnII GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
DriI GACNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 2 cut(s) 439, 579
Eam1104I CTCTTC 1 cut(s) 142
Eam1105I GACNNNNNGTC 1 cut(s) 463
EarI CTCTTC 1 cut(s) 142
EciI GGCGGA 1 cut(s) 502
Eco130I CCWWGG 1 cut(s) 399
Eco147I AGGCCT 2 cut(s) 496, 513
Eco24I GRGCYC 4 cut(s) 137, 717, 1235, 1639
Eco31I GGTCTC 1 cut(s) 1271
Eco47I GGWCC 5 cut(s) 228, 241, 457, 1022, 1119
Eco72I CACGTG 1 cut(s) 1520
Eco81I CCTNAGG 1 cut(s) 117
Eco88I CYCGRG 6 cut(s) 141, 213, 272, 1070, 1139, 1191
EcoNI CCTNNNNNAGG 2 cut(s) 120, 968
EcoO109I RGGNCCY 6 cut(s) 228, 241, 269, 457, 1119, 1635
EcoT14I CCWWGG 1 cut(s) 399
EcoT22I ATGCAT 1 cut(s) 1537
EcoT38I GRGCYC 4 cut(s) 137, 717, 1235, 1639
ErhI CCWWGG 1 cut(s) 399
FaqI GGGAC 2 cut(s) 227, 1131
FauI CCCGC 1 cut(s) 774
FauNDI CATATG 1 cut(s) 1317
FblI GTMKAC 1 cut(s) 1161
Fnu4HI GCNGC 4 cut(s) 199, 369, 1706, 1709
FokI GGATG 2 cut(s) 429, 1733
FriOI GRGCYC 4 cut(s) 137, 717, 1235, 1639
Fsp4HI GCNGC 4 cut(s) 199, 369, 1706, 1709
FspBI CTAG 2 cut(s) 948, 1622
GlaI GCGC 5 cut(s) 88, 184, 435, 575, 1272
GluI GCNGC 4 cut(s) 199, 369, 1706, 1709
GsuI CTGGAG 2 cut(s) 1098, 1490
HaeII RGCGCY 2 cut(s) 90, 186
HapII CCGG 3 cut(s) 527, 674, 881
HgaI GACGC 3 cut(s) 453, 659, 1147
HhaI GCGC 5 cut(s) 89, 185, 436, 576, 1273
Hin1I GRCGYC 3 cut(s) 464, 670, 1158
Hin6I GCGC 5 cut(s) 87, 183, 434, 574, 1271
HinP1I GCGC 5 cut(s) 87, 183, 434, 574, 1271
HincII GTYRAC 4 cut(s) 550, 787, 1051, 1162
HindII GTYRAC 4 cut(s) 550, 787, 1051, 1162
HindIII AAGCTT 1 cut(s) 98
HinfI GANTC 6 cut(s) 764, 958, 1073, 1144, 1293, 1679
HpaI GTTAAC 1 cut(s) 1051
HpaII CCGG 3 cut(s) 527, 674, 881
HphI GGTGA 6 cut(s) 68, 116, 233, 419, 598, 841
Hpy166II GTNNAC 6 cut(s) 550, 787, 832, 1051, 1162, 1423
Hpy188I TCNGA 3 cut(s) 769, 861, 957
Hpy8I GTNNAC 6 cut(s) 550, 787, 832, 1051, 1162, 1423
Hpy99I CGWCG 3 cut(s) 851, 1163, 1644
HpyAV CCTTC 6 cut(s) 53, 149, 197, 218, 1076, 1723
HpyCH4III ACNGT 6 cut(s) 110, 178, 979, 990, 1048, 1055
HpyCH4IV ACGT 2 cut(s) 560, 1519
HpyF10VI GCNNNNNNNGC 3 cut(s) 374, 493, 1492
HpyF3I CTNAG 7 cut(s) 117, 387, 801, 860, 1110, 1398, 1673
HpySE526I ACGT 2 cut(s) 560, 1519
Hsp92I GRCGYC 3 cut(s) 464, 670, 1158
HspAI GCGC 5 cut(s) 87, 183, 434, 574, 1271
KflI GGGWCCC 1 cut(s) 241
KpnI GGTACC 1 cut(s) 1101
KspAI GTTAAC 1 cut(s) 1051
Kzo9I GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
LguI GCTCTTC 1 cut(s) 142
LmnI GCTCC 9 cut(s) 10, 62, 326, 565, 608, 877, 928, 1492, 1612
Lsp1109I GCAGC 4 cut(s) 210, 380, 1692, 1720
LweI GCATC 2 cut(s) 22, 547
MaeI CTAG 2 cut(s) 948, 1622
MaeII ACGT 2 cut(s) 560, 1519
MaeIII GTNAC 3 cut(s) 104, 814, 1360
MalI GATC 9 cut(s) 795, 822, 899, 1068, 1219, 1350, 1467, 1592, 1692
MboI GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
MboII GAAGA 5 cut(s) 129, 302, 788, 932, 1127
MflI RGATCY 4 cut(s) 897, 1066, 1217, 1690
MhlI GDGCHC 8 cut(s) 115, 137, 717, 955, 1235, 1519, 1621, 1639
MlsI TGGCCA 1 cut(s) 581
MluCI AATT 5 cut(s) 424, 1336, 1429, 1448, 1695
MluNI TGGCCA 1 cut(s) 581
MlyI GAGTC 5 cut(s) 952, 1082, 1153, 1302, 1688
MmeI TCCRAC 6 cut(s) 285, 543, 963, 972, 1590, 1707
Mox20I TGGCCA 1 cut(s) 581
Mph1103I ATGCAT 1 cut(s) 1537
MroXI GAANNNNTTC 1 cut(s) 617
MscI TGGCCA 1 cut(s) 581
MseI TTAA 3 cut(s) 423, 657, 1050
MslI CAYNNNNRTG 2 cut(s) 75, 725
Msp20I TGGCCA 1 cut(s) 581
MspI CCGG 3 cut(s) 527, 674, 881
MvnI CGCG 8 cut(s) 235, 436, 576, 1033, 1271, 1273, 1347, 1595
MwoI GCNNNNNNNGC 3 cut(s) 374, 493, 1492
NciI CCSGG 1 cut(s) 527
NdeI CATATG 1 cut(s) 1317
NdeII GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
NmeAIII GCCGAG 1 cut(s) 1678
NmuCI GTSAC 3 cut(s) 104, 814, 1360
NruI TCGCGA 3 cut(s) 1033, 1347, 1595
NsiI ATGCAT 1 cut(s) 1537
NspI RCATGY 1 cut(s) 838
OliI CACNNNNGTG 1 cut(s) 725
PaeR7I CTCGAG 1 cut(s) 213
PaqCI CACCTGC 1 cut(s) 1702
PasI CCCWGGG 2 cut(s) 603, 1279
PceI AGGCCT 2 cut(s) 496, 513
PciSI GCTCTTC 1 cut(s) 142
PdmI GAANNNNTTC 1 cut(s) 617
PfeI GAWTC 1 cut(s) 764
PkrI GCNGC 4 cut(s) 200, 370, 1707, 1710
Ple19I CGATCG 1 cut(s) 1351
PleI GAGTC 5 cut(s) 952, 1081, 1152, 1301, 1687
PmaCI CACGTG 1 cut(s) 1520
PmlI CACGTG 1 cut(s) 1520
PpsI GAGTC 5 cut(s) 952, 1081, 1152, 1301, 1687
Ppu21I YACGTR 1 cut(s) 1520
PpuMI RGGWCCY 4 cut(s) 228, 241, 457, 1119
PshBI ATTAAT 1 cut(s) 423
Psp5II RGGWCCY 4 cut(s) 228, 241, 457, 1119
PspCI CACGTG 1 cut(s) 1520
PspOMI GGGCCC 1 cut(s) 1635
PspPI GGNCC 9 cut(s) 126, 228, 241, 269, 457, 1022, 1119, 1635, 1636
PspPPI RGGWCCY 4 cut(s) 228, 241, 457, 1119
PsrI GAACNNNNNNTAC 2 cut(s) 1415, 1447
PstI CTGCAG 2 cut(s) 1488, 1710
PstNI CAGNNNCTG 1 cut(s) 329
PsuI RGATCY 4 cut(s) 897, 1066, 1217, 1690
PvuI CGATCG 1 cut(s) 1351
RgaI GCGATCGC 1 cut(s) 1351
RruI TCGCGA 3 cut(s) 1033, 1347, 1595
RsaI GTAC 4 cut(s) 175, 392, 1099, 1276
RsaNI GTAC 4 cut(s) 174, 391, 1098, 1275
RseI CAYNNNNRTG 2 cut(s) 75, 725
SalI GTCGAC 1 cut(s) 1160
SapI GCTCTTC 1 cut(s) 142
SaqAI TTAA 3 cut(s) 423, 657, 1050
SatI GCNGC 4 cut(s) 199, 369, 1706, 1709
Sau3AI GATC 9 cut(s) 793, 820, 897, 1066, 1217, 1348, 1465, 1590, 1690
Sau96I GGNCC 9 cut(s) 126, 228, 241, 269, 457, 1022, 1119, 1635, 1636
ScaI AGTACT 1 cut(s) 392
SchI GAGTC 5 cut(s) 952, 1082, 1153, 1302, 1688
SduI GDGCHC 8 cut(s) 115, 137, 717, 955, 1235, 1519, 1621, 1639
SfaAI GCGATCGC 1 cut(s) 1351
SfaNI GCATC 2 cut(s) 22, 547
SfcI CTRYAG 4 cut(s) 330, 372, 1484, 1706
Sfr274I CTCGAG 1 cut(s) 213
SgfI GCGATCGC 1 cut(s) 1351
SinI GGWCC 5 cut(s) 228, 241, 457, 1022, 1119
SlaI CTCGAG 1 cut(s) 213
SmiMI CAYNNNNRTG 2 cut(s) 75, 725
SmlI CTYRAG 2 cut(s) 213, 1213
SmoI CTYRAG 2 cut(s) 213, 1213
SpeI ACTAGT 1 cut(s) 947
Sse9I AATT 5 cut(s) 424, 1336, 1429, 1448, 1695
SseBI AGGCCT 2 cut(s) 496, 513
SsiI CCGC 4 cut(s) 487, 781, 1020, 1064
SspMI CTAG 2 cut(s) 948, 1622
StuI AGGCCT 2 cut(s) 496, 513
StyI CCWWGG 1 cut(s) 399
TaaI ACNGT 6 cut(s) 110, 178, 979, 990, 1048, 1055
TaiI ACGT 2 cut(s) 563, 1522
TaqII GACCGA 1 cut(s) 833
TasI AATT 5 cut(s) 424, 1336, 1429, 1448, 1695
TatI WGTACW 1 cut(s) 390
TfiI GAWTC 1 cut(s) 764
Tru1I TTAA 3 cut(s) 423, 657, 1050
Tru9I TTAA 3 cut(s) 423, 657, 1050
TscAI CASTG 5 cut(s) 115, 183, 1060, 1632, 1677
TseFI GTSAC 3 cut(s) 104, 814, 1360
TseI GCWGC 4 cut(s) 198, 368, 1705, 1708
Tsp45I GTSAC 3 cut(s) 104, 814, 1360
TspDTI ATGAA 4 cut(s) 30, 1266, 1304, 1442
TspGWI ACGGA 1 cut(s) 737
TspRI CASTG 5 cut(s) 115, 183, 1060, 1632, 1677
VpaK11BI GGWCC 5 cut(s) 228, 241, 457, 1022, 1119
VspI ATTAAT 1 cut(s) 423
XagI CCTNNNNNAGG 2 cut(s) 120, 968
XceI RCATGY 1 cut(s) 838
XcmI CCANNNNNNNNNTGG 1 cut(s) 1315
XhoI CTCGAG 1 cut(s) 213
XmiI GTMKAC 1 cut(s) 1161
XmnI GAANNNNTTC 1 cut(s) 617
XspI CTAG 2 cut(s) 948, 1622
ZrmI AGTACT 1 cut(s) 392
Zsp2I ATGCAT 1 cut(s) 1537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.