Rroxscaffold_6G00395020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000075
Physical Location & Seq
Forward (+)
15888075 .. 15904993
16919 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00395020.1

Sequence Viewer

Length: 774 bp
ATGGAGAGGGAGATGGAGTCCGAGTGTGGGACACGTGCACTCGTACGGATGGGGACGGGTCGAGGAAGAGGACGGCCTCGCGGCTTCGTCTCGGGAGTCCCCCGAGTTGGTGTTGCTATCGATACGCACGGTAGTAAGAGGTCTCGGATTGATAATGTGTCGCGCTCGAGATATACAAGTAGGGGTTCTGGGGTCCTCGCCATGAGGTCGCCGGGGGTCTCGCTTACAAATCGTGTCAGAAGTGGAGACAACTATGGCTGCAATCTATTTCGGACCGATTTCAGTATTCAAGATTGCACAAACAGATTCATTGGGGAACGACCATTACATGTTGTTAAGCTGATTGGAACTTCTTCTAGAGATGTTTCCTTACACATAGGTATACCCGAGCATCTCACAAAAACGGCACTGTTTATCAATGGGCGTCGAGCCATGAGGGCAAGGGACCAATCTTCGAACCGTGAGCAAATAGGGAGAATTTTCCAGAGCTATAAACATGTGAACGGGCTTGTTCTAGCTCTCATAGAAGATATGACGAGATTTGCAAGAATGATGATCCAGCGCCGAATTGGTGACGAATCTCTATCTCGATGCGGTTCAGTTTGTAGCAATGATGGCCATGTGCCTTATAATTGTTGTTTCCGCCCTTGGAGGCATGGAACCCTCATGTCTAGTAAGTTTGAGAGACCTCCGGAGGTTCGTGCTTTGTGGCGAAAGATTAGTACGGCTTTGCTAGGATTCTTCATGGACACTGGGAATACTAAATGGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

257

Amino Acids

28.99

Weight (kDa)

10.98

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 630
AccI GTMKAC 1 cut(s) 382
AccII CGCG 2 cut(s) 81, 163
AccIII TCCGGA 1 cut(s) 691
AciI CCGC 3 cut(s) 81, 594, 643
AclWI GGATC 1 cut(s) 550
AcoI YGGCCR 1 cut(s) 616
AcsI RAATTY 1 cut(s) 477
AcvI CACGTG 1 cut(s) 35
AcyI GRCGYC 1 cut(s) 424
AfaI GTAC 2 cut(s) 45, 724
AfiI CCNNNNNNNGG 2 cut(s) 27, 107
AflIII ACRYGT 3 cut(s) 32, 328, 496
AgsI TTSAA 1 cut(s) 290
AluBI AGCT 3 cut(s) 340, 489, 518
AluI AGCT 3 cut(s) 340, 489, 518
Alw21I GWGCWC 1 cut(s) 40
Alw26I GTCTC 5 cut(s) 94, 147, 223, 240, 679
Alw44I GTGCAC 1 cut(s) 36
AlwI GGATC 1 cut(s) 550
Ama87I CYCGRG 4 cut(s) 91, 102, 166, 386
Aor13HI TCCGGA 1 cut(s) 691
AoxI GGCC 2 cut(s) 74, 616
ApaLI GTGCAC 1 cut(s) 36
ApeKI GCWGC 1 cut(s) 258
ApoI RAATTY 1 cut(s) 477
Asp700I GAANNNNTTC 1 cut(s) 352
AspLEI GCGC 2 cut(s) 165, 564
AspS9I GGNCC 3 cut(s) 193, 273, 445
AsuC2I CCSGG 1 cut(s) 213
AsuHPI GGTGA 1 cut(s) 584
AsuII TTCGAA 1 cut(s) 455
AvaI CYCGRG 4 cut(s) 91, 102, 166, 386
AvaII GGWCC 3 cut(s) 193, 273, 445
BaeGI GKGCMC 1 cut(s) 40
BalI TGGCCA 1 cut(s) 618
BbrPI CACGTG 1 cut(s) 35
Bbv12I GWGCWC 1 cut(s) 40
BbvI GCAGC 1 cut(s) 245
BccI CCATC 3 cut(s) 7, 43, 608
BceAI ACGGC 3 cut(s) 89, 420, 741
BcnI CCSGG 1 cut(s) 213
BcoDI GTCTC 5 cut(s) 94, 147, 223, 240, 679
BfaI CTAG 4 cut(s) 357, 515, 672, 734
BfoI RGCGCY 1 cut(s) 565
BglI GCCNNNNNGGC 1 cut(s) 437
BisI GCNGC 2 cut(s) 82, 259
BlsI GCNGC 2 cut(s) 83, 260
Bme1390I CCNGG 1 cut(s) 213
Bme18I GGWCC 3 cut(s) 193, 273, 445
BmeT110I CYCGRG 4 cut(s) 91, 102, 166, 386
BmgT120I GGNCC 3 cut(s) 193, 273, 445
BmiI GGNNCC 3 cut(s) 194, 446, 661
BmrFI CCNGG 1 cut(s) 213
BmrI ACTGGG 1 cut(s) 762
BmsI GCATC 2 cut(s) 400, 581
BmuI ACTGGG 1 cut(s) 762
Bpu14I TTCGAA 1 cut(s) 455
BpuMI CCSGG 1 cut(s) 213
Bsa29I ATCGAT 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 35
BsaHI GRCGYC 1 cut(s) 424
BsaI GGTCTC 3 cut(s) 147, 223, 679
BsaJI CCNNGG 2 cut(s) 212, 647
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 3 cut(s) 8, 32, 38
Bsc4I CCNNNNNNNGG 2 cut(s) 27, 107
Bse1I ACTGG 1 cut(s) 757
Bse3DI GCAATG 1 cut(s) 616
BseAI TCCGGA 1 cut(s) 691
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 2 cut(s) 212, 647
BseGI GGATG 1 cut(s) 54
BseLI CCNNNNNNNGG 2 cut(s) 27, 107
BseMI GCAATG 1 cut(s) 616
BseNI ACTGG 1 cut(s) 757
BseSI GKGCMC 1 cut(s) 40
BseXI GCAGC 1 cut(s) 245
Bsh1236I CGCG 2 cut(s) 81, 163
BshFI GGCC 2 cut(s) 76, 618
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 1 cut(s) 40
BsiHKCI CYCGRG 4 cut(s) 91, 102, 166, 386
BsiSI CCGG 2 cut(s) 212, 692
BsiWI CGTACG 1 cut(s) 43
BslFI GGGAC 4 cut(s) 43, 67, 83, 458
BslI CCNNNNNNNGG 2 cut(s) 27, 107
BsmAI GTCTC 5 cut(s) 94, 147, 223, 240, 679
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 4 cut(s) 43, 67, 83, 458
BsnI GGCC 2 cut(s) 76, 618
Bso31I GGTCTC 3 cut(s) 147, 223, 679
BsoBI CYCGRG 4 cut(s) 91, 102, 166, 386
Bsp119I TTCGAA 1 cut(s) 455
Bsp1286I GDGCHC 1 cut(s) 40
Bsp13I TCCGGA 1 cut(s) 691
Bsp143I GATC 1 cut(s) 555
BspACI CCGC 3 cut(s) 81, 594, 643
BspANI GGCC 2 cut(s) 76, 618
BspDI ATCGAT 1 cut(s) 120
BspEI TCCGGA 1 cut(s) 691
BspFNI CGCG 2 cut(s) 81, 163
BspLI GGNNCC 3 cut(s) 194, 446, 661
BspPI GGATC 1 cut(s) 550
BspT104I TTCGAA 1 cut(s) 455
BspTNI GGTCTC 3 cut(s) 147, 223, 679
BsrDI GCAATG 1 cut(s) 616
BsrI ACTGG 1 cut(s) 757
BssECI CCNNGG 2 cut(s) 212, 647
BssMI GATC 1 cut(s) 555
BssNAI GTATAC 1 cut(s) 383
BssNI GRCGYC 1 cut(s) 424
BssT1I CCWWGG 1 cut(s) 647
Bst1107I GTATAC 1 cut(s) 383
Bst4CI ACNGT 3 cut(s) 131, 411, 461
Bst6I CTCTTC 1 cut(s) 61
BstACI GRCGYC 1 cut(s) 424
BstBAI YACGTR 1 cut(s) 35
BstBI TTCGAA 1 cut(s) 455
BstF5I GGATG 1 cut(s) 54
BstFNI CGCG 2 cut(s) 81, 163
BstH2I RGCGCY 1 cut(s) 565
BstHHI GCGC 2 cut(s) 165, 564
BstKTI GATC 1 cut(s) 558
BstMAI GTCTC 5 cut(s) 94, 147, 223, 240, 679
BstMBI GATC 1 cut(s) 555
BstMWI GCNNNNNNNGC 2 cut(s) 437, 615
BstNSI RCATGY 2 cut(s) 332, 500
BstSCI CCNGG 1 cut(s) 211
BstSLI GKGCMC 1 cut(s) 40
BstUI CGCG 2 cut(s) 81, 163
BstV1I GCAGC 1 cut(s) 245
BstZ17I GTATAC 1 cut(s) 383
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 2 cut(s) 76, 618
BsuTUI ATCGAT 1 cut(s) 120
BtsCI GGATG 1 cut(s) 54
BtsIMutI CAGTG 2 cut(s) 407, 750
CfoI GCGC 2 cut(s) 165, 564
Cfr13I GGNCC 3 cut(s) 193, 273, 445
ClaI ATCGAT 1 cut(s) 120
CpoI CGGWCCG 1 cut(s) 273
CseI GACGC 1 cut(s) 413
Csp6I GTAC 2 cut(s) 44, 723
CspI CGGWCCG 1 cut(s) 273
CviAII CATG 8 cut(s) 202, 329, 433, 497, 620, 656, 667, 745
CviQI GTAC 2 cut(s) 44, 723
DpnI GATC 1 cut(s) 557
DpnII GATC 1 cut(s) 555
EaeI YGGCCR 1 cut(s) 616
Eam1104I CTCTTC 1 cut(s) 61
EarI CTCTTC 1 cut(s) 61
EciI GGCGGA 1 cut(s) 632
Eco130I CCWWGG 1 cut(s) 647
Eco31I GGTCTC 3 cut(s) 147, 223, 679
Eco47I GGWCC 3 cut(s) 193, 273, 445
Eco72I CACGTG 1 cut(s) 35
Eco88I CYCGRG 4 cut(s) 91, 102, 166, 386
EcoO109I RGGNCCY 1 cut(s) 193
EcoT14I CCWWGG 1 cut(s) 647
ErhI CCWWGG 1 cut(s) 647
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 8 cut(s) 205, 332, 436, 500, 623, 659, 670, 748
FaqI GGGAC 4 cut(s) 43, 67, 83, 458
FatI CATG 8 cut(s) 201, 328, 432, 496, 619, 655, 666, 744
FblI GTMKAC 1 cut(s) 382
Fnu4HI GCNGC 2 cut(s) 82, 259
FokI GGATG 1 cut(s) 61
Fsp4HI GCNGC 2 cut(s) 82, 259
FspBI CTAG 4 cut(s) 357, 515, 672, 734
GlaI GCGC 2 cut(s) 164, 563
GluI GCNGC 2 cut(s) 82, 259
HaeII RGCGCY 1 cut(s) 565
HaeIII GGCC 2 cut(s) 76, 618
HapII CCGG 2 cut(s) 212, 692
HgaI GACGC 1 cut(s) 413
HhaI GCGC 2 cut(s) 165, 564
Hin1I GRCGYC 1 cut(s) 424
Hin1II CATG 8 cut(s) 205, 332, 436, 500, 623, 659, 670, 748
Hin6I GCGC 2 cut(s) 163, 562
HinP1I GCGC 2 cut(s) 163, 562
HinfI GANTC 5 cut(s) 17, 96, 306, 578, 738
HpaII CCGG 2 cut(s) 212, 692
HphI GGTGA 1 cut(s) 584
Hpy166II GTNNAC 3 cut(s) 38, 383, 502
Hpy188I TCNGA 4 cut(s) 22, 147, 239, 273
Hpy188III TCNNGA 7 cut(s) 93, 168, 290, 357, 484, 588, 692
Hpy8I GTNNAC 3 cut(s) 38, 383, 502
Hpy99I CGWCG 1 cut(s) 429
HpyCH4III ACNGT 3 cut(s) 131, 411, 461
HpyCH4IV ACGT 1 cut(s) 34
HpyCH4V TGCA 4 cut(s) 38, 261, 297, 545
HpyF10VI GCNNNNNNNGC 2 cut(s) 437, 615
HpySE526I ACGT 1 cut(s) 34
Hsp92I GRCGYC 1 cut(s) 424
Hsp92II CATG 8 cut(s) 205, 332, 436, 500, 623, 659, 670, 748
HspAI GCGC 2 cut(s) 163, 562
Kpn2I TCCGGA 1 cut(s) 691
Kzo9I GATC 1 cut(s) 555
LpnPI CCDG 6 cut(s) 174, 225, 497, 572, 705, 738
Lsp1109I GCAGC 1 cut(s) 245
LweI GCATC 2 cut(s) 400, 581
MaeI CTAG 4 cut(s) 357, 515, 672, 734
MaeII ACGT 1 cut(s) 34
MaeIII GTNAC 1 cut(s) 572
MalI GATC 1 cut(s) 557
MboI GATC 1 cut(s) 555
MboII GAAGA 5 cut(s) 78, 345, 444, 539, 733
MhlI GDGCHC 1 cut(s) 40
MlsI TGGCCA 1 cut(s) 618
MluCI AATT 3 cut(s) 477, 567, 631
MluNI TGGCCA 1 cut(s) 618
MlyI GAGTC 2 cut(s) 26, 105
Mox20I TGGCCA 1 cut(s) 618
MroI TCCGGA 1 cut(s) 691
MroXI GAANNNNTTC 1 cut(s) 352
MscI TGGCCA 1 cut(s) 618
MseI TTAA 1 cut(s) 336
Msp20I TGGCCA 1 cut(s) 618
MspI CCGG 2 cut(s) 212, 692
MspR9I CCNGG 1 cut(s) 213
MvnI CGCG 2 cut(s) 81, 163
MwoI GCNNNNNNNGC 2 cut(s) 437, 615
NciI CCSGG 1 cut(s) 213
NdeII GATC 1 cut(s) 555
NlaIII CATG 8 cut(s) 205, 332, 436, 500, 623, 659, 670, 748
NlaIV GGNNCC 3 cut(s) 194, 446, 661
NmuCI GTSAC 1 cut(s) 572
NspI RCATGY 2 cut(s) 332, 500
NspV TTCGAA 1 cut(s) 455
PaeR7I CTCGAG 1 cut(s) 166
PciI ACATGT 2 cut(s) 328, 496
PdmI GAANNNNTTC 1 cut(s) 352
PfeI GAWTC 3 cut(s) 306, 578, 738
Pfl23II CGTACG 1 cut(s) 43
PkrI GCNGC 2 cut(s) 83, 260
PleI GAGTC 2 cut(s) 25, 104
PmaCI CACGTG 1 cut(s) 35
PmlI CACGTG 1 cut(s) 35
PpsI GAGTC 2 cut(s) 25, 104
Ppu21I YACGTR 1 cut(s) 35
PpuMI RGGWCCY 1 cut(s) 193
PscI ACATGT 2 cut(s) 328, 496
PsiI TTATAA 1 cut(s) 630
Psp5II RGGWCCY 1 cut(s) 193
PspCI CACGTG 1 cut(s) 35
PspLI CGTACG 1 cut(s) 43
PspN4I GGNNCC 3 cut(s) 194, 446, 661
PspPI GGNCC 3 cut(s) 193, 273, 445
PspPPI RGGWCCY 1 cut(s) 193
PsrI GAACNNNNNNTAC 2 cut(s) 309, 341
RsaI GTAC 2 cut(s) 45, 724
RsaNI GTAC 2 cut(s) 44, 723
Rsr2I CGGWCCG 1 cut(s) 273
RsrII CGGWCCG 1 cut(s) 273
SaqAI TTAA 1 cut(s) 336
SatI GCNGC 2 cut(s) 82, 259
Sau3AI GATC 1 cut(s) 555
Sau96I GGNCC 3 cut(s) 193, 273, 445
SchI GAGTC 2 cut(s) 26, 105
ScrFI CCNGG 1 cut(s) 213
SduI GDGCHC 1 cut(s) 40
SetI ASST 9 cut(s) 37, 143, 209, 342, 382, 491, 520, 691, 699
SfaNI GCATC 2 cut(s) 400, 581
Sfr274I CTCGAG 1 cut(s) 166
SfuI TTCGAA 1 cut(s) 455
SinI GGWCC 3 cut(s) 193, 273, 445
SlaI CTCGAG 1 cut(s) 166
SmlI CTYRAG 1 cut(s) 166
SmoI CTYRAG 1 cut(s) 166
Sse9I AATT 3 cut(s) 477, 567, 631
SsiI CCGC 3 cut(s) 81, 594, 643
SspMI CTAG 4 cut(s) 357, 515, 672, 734
StyD4I CCNGG 1 cut(s) 211
StyI CCWWGG 1 cut(s) 647
TaaI ACNGT 3 cut(s) 131, 411, 461
TaiI ACGT 1 cut(s) 37
TaqI TCGA 6 cut(s) 61, 120, 167, 427, 455, 589
TaqII GACCGA 1 cut(s) 290
TasI AATT 3 cut(s) 477, 567, 631
TauI GCSGC 1 cut(s) 84
TfiI GAWTC 3 cut(s) 306, 578, 738
Tru1I TTAA 1 cut(s) 336
Tru9I TTAA 1 cut(s) 336
TscAI CASTG 2 cut(s) 414, 757
TseFI GTSAC 1 cut(s) 572
TseI GCWGC 1 cut(s) 258
Tsp45I GTSAC 1 cut(s) 572
TspDTI ATGAA 2 cut(s) 298, 733
TspGWI ACGGA 1 cut(s) 61
TspRI CASTG 2 cut(s) 414, 757
VneI GTGCAC 1 cut(s) 36
VpaK11BI GGWCC 3 cut(s) 193, 273, 445
XapI RAATTY 1 cut(s) 477
XbaI TCTAGA 1 cut(s) 356
XceI RCATGY 2 cut(s) 332, 500
XcmI CCANNNNNNNNNTGG 1 cut(s) 566
XhoI CTCGAG 1 cut(s) 166
XmiI GTMKAC 1 cut(s) 382
XmnI GAANNNNTTC 1 cut(s) 352
XspI CTAG 4 cut(s) 357, 515, 672, 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.