Rmu_sc0000650.1_g000012

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000650.1
OG0000075
Physical Location & Seq
Forward (+)
29988 .. 31864
1877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000650.1_g000012.1.cds

Sequence Viewer

Length: 1533 bp
atgcgctggcaagagtcagtcccccgagactcgggaagtaataaggcattccccagggtctcagcaagaggggaggatcttggtgatggggctcgggtgtcggagcccgtggtagaggtggagatctccttggaggagctgttggaaaaagtggagcagtgtcagagcgacactagtgctcgtgctcgcctggggcaggatgcggttctagagcagttggaaaccgtttttggtgatgaggtaccggaggtgcaacctgaagttggagaggatatagtcggggttgctcgggttaccgaggtgggcacccaagatggcgaaggggaaggggtccgagtgtcggacacctgtgctcgtatggatggggtcttatcgaggaaaaggaaggctttgcagcttcgtctctggagtccctcggttggtgtcgctgtcaacgcttgcggcagtaagaggtctcgggttgataatgtattgcgctcgcgcgatgaggttgtcgggggtctcacgcgcacactgggcgagattggaattaccgatggcaccatccttcatatggtttctgacctacggaattgtcatcgctaccgcagtagcgcagtgaacatgaattatcacgcctcaggtgagttggtggctcattttgatcgagagatggctcggctgcaaggggagctggaggccgagaggaattgggcgcgtgagcttcaggatgcggtggaccaagggcgggtggagcatggggatatgaggcgagtcattgaagaagggatagcgaggaagatggagctggagcgagcgctggccatagaggaggcacgtcgtcaagaggatgttggtgctattgctccgctgagggaggtcaaagaacgtgatgccgagttggagcttcgtgctgctgccttgcaaattttggctccttatcctgatcgcatttggtggggcaagttgggaatctgcagagggaggtggaccgtttgcgagatgtggagctggaggcaggcagagatggagtggcttaggaaggagttagtcgaacaaaaaactcgatcaagtagctttgccgatgagtgtattcgcctgcgtgctgcttccgagacacatagggacaagcttgccaaggctaggagagatggtgtggataaggcagtggatctctatctccggacaaatcactttcaagagaaactgaacaaagccttctcggatggggccttgcactcgattcgagatggtatcgctactggctggattgatcaggagaaaatggtgcgagatacgcaggccaagaaggctgcgaggtcgcaagccagcccggcaagtggtggtcaaggtaccgggattgtgatccggaagcaggttgtgtcggaacctacatcgggccaagctggtgatcgtgaggcgggtggtgttactggcgagcaagggaccggtggtcaggagggagaggtgcaaggcgagaatgttgaagggcgaggggtggcggatgagagagatcaggtggagcagacacgtagtgctgagggcgagacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

510

Amino Acids

56.47

Weight (kDa)

5.23

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1345
Acc65I GGTACC 2 cut(s) 241, 1331
AccB1I GGYRCC 4 cut(s) 241, 305, 539, 1331
AccII CGCG 4 cut(s) 481, 483, 508, 697
AccIII TCCGGA 2 cut(s) 1161, 1347
AciI CCGC 8 cut(s) 203, 441, 586, 713, 727, 848, 1400, 1481
AclWI GGATC 3 cut(s) 84, 1158, 1339
AcoI YGGCCR 1 cut(s) 801
AcsI RAATTY 1 cut(s) 906
AcuI CTGAAG 2 cut(s) 279, 689
AdeI CACNNNGTG 1 cut(s) 1514
AfaI GTAC 2 cut(s) 243, 1333
AfeI AGCGCT 1 cut(s) 798
AflIII ACRYGT 1 cut(s) 1508
AgeI ACCGGT 1 cut(s) 1427
AgsI TTSAA 3 cut(s) 761, 1178, 1466
AhdI GACNNNNNGTC 1 cut(s) 1431
AhlI ACTAGT 1 cut(s) 173
AjiI CACGTC 1 cut(s) 818
AjnI CCWGG 2 cut(s) 53, 189
AjuI GAANNNNNNNTTGG 2 cut(s) 213, 245
Alw21I GWGCWC 3 cut(s) 181, 187, 355
Alw26I GTCTC 7 cut(s) 21, 64, 407, 459, 506, 1088, 1520
AlwI GGATC 3 cut(s) 84, 1158, 1339
Ama87I CYCGRG 5 cut(s) 24, 31, 93, 288, 456
Aor13HI TCCGGA 2 cut(s) 1161, 1347
Aor51HI AGCGCT 1 cut(s) 798
AoxI GGCC 5 cut(s) 678, 801, 1209, 1281, 1378
ApeKI GCWGC 6 cut(s) 394, 661, 893, 896, 1085, 1292
ApoI RAATTY 1 cut(s) 906
AsiGI ACCGGT 1 cut(s) 1427
Asp718I GGTACC 2 cut(s) 241, 1331
AspLEI GCGC 7 cut(s) 6, 477, 483, 510, 596, 697, 799
AspS9I GGNCC 6 cut(s) 331, 718, 969, 1209, 1378, 1425
AsuC2I CCSGG 2 cut(s) 1313, 1336
AsuHPI GGTGA 4 cut(s) 95, 245, 635, 1400
AvaI CYCGRG 5 cut(s) 24, 31, 93, 288, 456
AvaII GGWCC 4 cut(s) 331, 718, 969, 1425
AxyI CCTNAGG 1 cut(s) 619
BaeGI GKGCMC 1 cut(s) 308
BalI TGGCCA 1 cut(s) 803
BanI GGYRCC 4 cut(s) 241, 305, 539, 1331
BanII GRGCYC 2 cut(s) 94, 108
BauI CACGAG 1 cut(s) 180
Bbv12I GWGCWC 3 cut(s) 181, 187, 355
BbvCI CCTCAGC 2 cut(s) 851, 1518
BbvI GCAGC 6 cut(s) 406, 648, 880, 883, 1072, 1279
BcgI CGANNNNNNTGC 4 cut(s) 158, 192, 1205, 1239
BciT130I CCWGG 2 cut(s) 55, 191
BclI TGATCA 1 cut(s) 1252
BcnI CCSGG 2 cut(s) 1313, 1336
BcoDI GTCTC 7 cut(s) 21, 64, 407, 459, 506, 1088, 1520
BcuI ACTAGT 1 cut(s) 173
BfaI CTAG 3 cut(s) 174, 209, 1122
BfmI CTRYAG 1 cut(s) 955
BfoI RGCGCY 1 cut(s) 800
BfuAI ACCTGC 1 cut(s) 1345
BglI GCCNNNNNGGC 2 cut(s) 1289, 1313
BglII AGATCT 1 cut(s) 123
BisI GCNGC 7 cut(s) 395, 442, 662, 894, 897, 1086, 1293
BlsI GCNGC 7 cut(s) 396, 443, 663, 895, 898, 1087, 1294
Bme1390I CCNGG 4 cut(s) 55, 191, 1313, 1336
Bme18I GGWCC 4 cut(s) 331, 718, 969, 1425
BmeRI GACNNNNNGTC 1 cut(s) 1431
BmeT110I CYCGRG 5 cut(s) 24, 31, 93, 288, 456
BmgBI CACGTC 1 cut(s) 818
BmgT120I GGNCC 6 cut(s) 331, 718, 969, 1209, 1378, 1425
BmrFI CCNGG 4 cut(s) 55, 191, 1313, 1336
BmrI ACTGGG 1 cut(s) 524
BmsI GCATC 3 cut(s) 190, 700, 862
BmuI ACTGGG 1 cut(s) 524
BpmI CTGGAG 4 cut(s) 427, 695, 809, 1012
Bpu10I CCTNAGC 3 cut(s) 851, 1016, 1518
BpuMI CCSGG 2 cut(s) 1313, 1336
BsaAI YACGTR 1 cut(s) 1511
BsaBI GATNNNNATC 2 cut(s) 1155, 1343
BsaI GGTCTC 3 cut(s) 64, 459, 506
BsaJI CCNNGG 9 cut(s) 53, 54, 108, 129, 190, 297, 414, 721, 1116
BsaWI WCCGGW 4 cut(s) 244, 1161, 1347, 1427
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 1117, 1147
Bse118I RCCGGY 1 cut(s) 1427
Bse1I ACTGG 3 cut(s) 519, 1246, 1417
Bse21I CCTNAGG 1 cut(s) 619
Bse8I GATNNNNATC 2 cut(s) 1155, 1343
BseAI TCCGGA 2 cut(s) 1161, 1347
BseBI CCWGG 2 cut(s) 55, 191
BseDI CCNNGG 9 cut(s) 53, 54, 108, 129, 190, 297, 414, 721, 1116
BseGI GGATG 7 cut(s) 205, 367, 543, 715, 835, 1210, 1489
BseJI GATNNNNATC 2 cut(s) 1155, 1343
BseMII CTCAG 4 cut(s) 75, 633, 842, 1509
BseNI ACTGG 3 cut(s) 519, 1246, 1417
BseRI GAGGAG 2 cut(s) 149, 824
BseSI GKGCMC 1 cut(s) 308
BseXI GCAGC 6 cut(s) 406, 648, 880, 883, 1072, 1279
Bsh1236I CGCG 4 cut(s) 481, 483, 508, 697
BshFI GGCC 5 cut(s) 680, 803, 1211, 1283, 1380
BshNI GGYRCC 4 cut(s) 241, 305, 539, 1331
BshTI ACCGGT 1 cut(s) 1427
BsiHKAI GWGCWC 3 cut(s) 181, 187, 355
BsiHKCI CYCGRG 5 cut(s) 24, 31, 93, 288, 456
BsiSI CCGG 6 cut(s) 245, 1162, 1313, 1335, 1348, 1428
BslFI GGGAC 4 cut(s) 5, 396, 1118, 1438
BsmAI GTCTC 7 cut(s) 21, 64, 407, 459, 506, 1088, 1520
BsmBI CGTCTC 1 cut(s) 407
BsmFI GGGAC 4 cut(s) 5, 396, 1118, 1438
BsmI GAATGC 1 cut(s) 47
BsnI GGCC 5 cut(s) 680, 803, 1211, 1283, 1380
Bso31I GGTCTC 3 cut(s) 64, 459, 506
BsoBI CYCGRG 5 cut(s) 24, 31, 93, 288, 456
Bsp1286I GDGCHC 6 cut(s) 94, 108, 181, 187, 308, 355
Bsp13I TCCGGA 2 cut(s) 1161, 1347
BspACI CCGC 8 cut(s) 203, 441, 586, 713, 727, 848, 1400, 1481
BspANI GGCC 5 cut(s) 680, 803, 1211, 1283, 1380
BspCNI CTCAG 4 cut(s) 74, 632, 843, 1510
BspEI TCCGGA 2 cut(s) 1161, 1347
BspFNI CGCG 4 cut(s) 481, 483, 508, 697
BspMAI CTGCAG 1 cut(s) 959
BspMI ACCTGC 1 cut(s) 1345
BspPI GGATC 3 cut(s) 84, 1158, 1339
BspT107I GGYRCC 4 cut(s) 241, 305, 539, 1331
BspTNI GGTCTC 3 cut(s) 64, 459, 506
BsrFI RCCGGY 1 cut(s) 1427
BsrI ACTGG 3 cut(s) 519, 1246, 1417
BssAI RCCGGY 1 cut(s) 1427
BssECI CCNNGG 9 cut(s) 53, 54, 108, 129, 190, 297, 414, 721, 1116
BssSI CACGAG 1 cut(s) 180
BssT1I CCWWGG 3 cut(s) 129, 721, 1116
Bst2BI CACGAG 1 cut(s) 180
Bst2UI CCWGG 2 cut(s) 55, 191
Bst4CI ACNGT 2 cut(s) 226, 973
BstBAI YACGTR 1 cut(s) 1511
BstDEI CTNAG 5 cut(s) 61, 619, 851, 1016, 1518
BstDSI CCRYGG 1 cut(s) 108
BstEII GGTNACC 1 cut(s) 292
BstENI CCTNNNNNAGG 1 cut(s) 194
BstF5I GGATG 7 cut(s) 205, 367, 543, 715, 835, 1210, 1489
BstFNI CGCG 4 cut(s) 481, 483, 508, 697
BstH2I RGCGCY 1 cut(s) 800
BstHHI GCGC 7 cut(s) 6, 477, 483, 510, 596, 697, 799
BstMAI GTCTC 7 cut(s) 21, 64, 407, 459, 506, 1088, 1520
BstMWI GCNNNNNNNGC 7 cut(s) 434, 516, 670, 733, 1276, 1289, 1313
BstNI CCWGG 2 cut(s) 55, 191
BstPI GGTNACC 1 cut(s) 292
BstSCI CCNGG 4 cut(s) 53, 189, 1311, 1334
BstSFI CTRYAG 1 cut(s) 955
BstSLI GKGCMC 1 cut(s) 308
BstUI CGCG 4 cut(s) 481, 483, 508, 697
BstV1I GCAGC 6 cut(s) 406, 648, 880, 883, 1072, 1279
BstX2I RGATCY 3 cut(s) 76, 123, 1150
BstYI RGATCY 3 cut(s) 76, 123, 1150
Bsu36I CCTNAGG 1 cut(s) 619
BsuRI GGCC 5 cut(s) 680, 803, 1211, 1283, 1380
BtgI CCRYGG 1 cut(s) 108
BtgZI GCGATG 2 cut(s) 498, 563
BtrI CACGTC 1 cut(s) 818
BtsCI GGATG 7 cut(s) 205, 367, 543, 715, 835, 1210, 1489
BtsI GCAGTG 3 cut(s) 164, 603, 1152
BtsIMutI CAGTG 4 cut(s) 164, 512, 603, 1152
BveI ACCTGC 1 cut(s) 1345
CfoI GCGC 7 cut(s) 6, 477, 483, 510, 596, 697, 799
Cfr10I RCCGGY 1 cut(s) 1427
Cfr13I GGNCC 6 cut(s) 331, 718, 969, 1209, 1378, 1425
Csp6I GTAC 2 cut(s) 242, 1332
CspAI ACCGGT 1 cut(s) 1427
CviAII CATG 2 cut(s) 604, 737
CviQI GTAC 2 cut(s) 242, 1332
DdeI CTNAG 5 cut(s) 61, 619, 851, 1016, 1518
DraIII CACNNNGTG 1 cut(s) 1514
DriI GACNNNNNGTC 1 cut(s) 1431
EaeI YGGCCR 1 cut(s) 801
Eam1105I GACNNNNNGTC 1 cut(s) 1431
EciI GGCGGA 1 cut(s) 1496
Eco130I CCWWGG 3 cut(s) 129, 721, 1116
Eco24I GRGCYC 2 cut(s) 94, 108
Eco31I GGTCTC 3 cut(s) 64, 459, 506
Eco47I GGWCC 4 cut(s) 331, 718, 969, 1425
Eco47III AGCGCT 1 cut(s) 798
Eco57I CTGAAG 2 cut(s) 279, 689
Eco81I CCTNAGG 1 cut(s) 619
Eco88I CYCGRG 5 cut(s) 24, 31, 93, 288, 456
Eco91I GGTNACC 1 cut(s) 292
EcoNI CCTNNNNNAGG 1 cut(s) 194
EcoO109I RGGNCCY 1 cut(s) 1209
EcoO65I GGTNACC 1 cut(s) 292
EcoRII CCWGG 2 cut(s) 53, 189
EcoT14I CCWWGG 3 cut(s) 129, 721, 1116
EcoT38I GRGCYC 2 cut(s) 94, 108
ErhI CCWWGG 3 cut(s) 129, 721, 1116
Esp3I CGTCTC 1 cut(s) 407
FaeI CATG 2 cut(s) 607, 740
FaiI YATR 9 cut(s) 275, 359, 552, 554, 605, 738, 746, 806, 1101
FalI AAGNNNNNCTT 2 cut(s) 373, 405
FaqI GGGAC 4 cut(s) 5, 396, 1118, 1438
FatI CATG 2 cut(s) 603, 736
FauI CCCGC 2 cut(s) 720, 1393
FauNDI CATATG 1 cut(s) 552
FbaI TGATCA 1 cut(s) 1252
Fnu4HI GCNGC 7 cut(s) 395, 442, 662, 894, 897, 1086, 1293
FokI GGATG 7 cut(s) 212, 374, 530, 722, 842, 1217, 1496
FriOI GRGCYC 2 cut(s) 94, 108
Fsp4HI GCNGC 7 cut(s) 395, 442, 662, 894, 897, 1086, 1293
FspBI CTAG 3 cut(s) 174, 209, 1122
GlaI GCGC 7 cut(s) 5, 476, 482, 509, 595, 696, 798
GluI GCNGC 7 cut(s) 395, 442, 662, 894, 897, 1086, 1293
GsuI CTGGAG 4 cut(s) 427, 695, 809, 1012
HaeII RGCGCY 1 cut(s) 800
HaeIII GGCC 5 cut(s) 680, 803, 1211, 1283, 1380
HapII CCGG 6 cut(s) 245, 1162, 1313, 1335, 1348, 1428
HhaI GCGC 7 cut(s) 6, 477, 483, 510, 596, 697, 799
Hin1II CATG 2 cut(s) 607, 740
Hin6I GCGC 7 cut(s) 4, 475, 481, 508, 594, 695, 797
HinP1I GCGC 7 cut(s) 4, 475, 481, 508, 594, 695, 797
HincII GTYRAC 1 cut(s) 433
HindII GTYRAC 1 cut(s) 433
HindIII AAGCTT 1 cut(s) 1109
HinfI GANTC 6 cut(s) 14, 29, 409, 753, 951, 1222
HpaII CCGG 6 cut(s) 245, 1162, 1313, 1335, 1348, 1428
HphI GGTGA 4 cut(s) 95, 245, 635, 1400
Hpy166II GTNNAC 4 cut(s) 433, 601, 718, 969
Hpy188I TCNGA 8 cut(s) 103, 165, 335, 343, 562, 1093, 1204, 1366
Hpy8I GTNNAC 4 cut(s) 433, 601, 718, 969
Hpy99I CGWCG 1 cut(s) 822
HpyAV CCTTC 9 cut(s) 314, 320, 379, 557, 758, 1015, 1207, 1282, 1460
HpyCH4III ACNGT 2 cut(s) 226, 973
HpyCH4IV ACGT 3 cut(s) 817, 868, 1510
HpyCH4V TGCA 7 cut(s) 253, 394, 664, 904, 957, 1216, 1450
HpyF10VI GCNNNNNNNGC 7 cut(s) 434, 516, 670, 733, 1276, 1289, 1313
HpyF3I CTNAG 5 cut(s) 61, 619, 851, 1016, 1518
HpySE526I ACGT 3 cut(s) 817, 868, 1510
Hsp92II CATG 2 cut(s) 607, 740
HspAI GCGC 7 cut(s) 4, 475, 481, 508, 594, 695, 797
Kpn2I TCCGGA 2 cut(s) 1161, 1347
KpnI GGTACC 2 cut(s) 245, 1335
Ksp22I TGATCA 1 cut(s) 1252
Lsp1109I GCAGC 6 cut(s) 406, 648, 880, 883, 1072, 1279
LweI GCATC 3 cut(s) 190, 700, 862
MaeI CTAG 3 cut(s) 174, 209, 1122
MaeII ACGT 3 cut(s) 817, 868, 1510
MaeIII GTNAC 2 cut(s) 292, 1408
MboII GAAGA 2 cut(s) 773, 790
MflI RGATCY 3 cut(s) 76, 123, 1150
MhlI GDGCHC 6 cut(s) 94, 108, 181, 187, 308, 355
MlsI TGGCCA 1 cut(s) 803
MluCI AATT 5 cut(s) 528, 571, 607, 688, 906
MluNI TGGCCA 1 cut(s) 803
MlyI GAGTC 4 cut(s) 23, 23, 418, 762
MmeI TCCRAC 7 cut(s) 81, 123, 198, 244, 321, 861, 1344
Mox20I TGGCCA 1 cut(s) 803
MroI TCCGGA 2 cut(s) 1161, 1347
MscI TGGCCA 1 cut(s) 803
MseI TTAA 1 cut(s) 1531
Msp20I TGGCCA 1 cut(s) 803
MspA1I CMGCKG 1 cut(s) 850
MspI CCGG 6 cut(s) 245, 1162, 1313, 1335, 1348, 1428
MspR9I CCNGG 4 cut(s) 55, 191, 1313, 1336
Mva1269I GAATGC 1 cut(s) 47
MvaI CCWGG 2 cut(s) 55, 191
MvnI CGCG 4 cut(s) 481, 483, 508, 697
MwoI GCNNNNNNNGC 7 cut(s) 434, 516, 670, 733, 1276, 1289, 1313
NciI CCSGG 2 cut(s) 1313, 1336
NdeI CATATG 1 cut(s) 552
NlaIII CATG 2 cut(s) 607, 740
NmeAIII GCCGAG 3 cut(s) 637, 706, 901
PasI CCCWGGG 1 cut(s) 54
PctI GAATGC 1 cut(s) 47
PfeI GAWTC 2 cut(s) 951, 1222
PinAI ACCGGT 1 cut(s) 1427
PkrI GCNGC 7 cut(s) 396, 443, 663, 895, 898, 1087, 1294
PleI GAGTC 4 cut(s) 22, 23, 417, 761
PpsI GAGTC 4 cut(s) 22, 23, 417, 761
Ppu21I YACGTR 1 cut(s) 1511
Psp6I CCWGG 2 cut(s) 53, 189
PspEI GGTNACC 1 cut(s) 292
PspGI CCWGG 2 cut(s) 53, 189
PspPI GGNCC 6 cut(s) 331, 718, 969, 1209, 1378, 1425
PstI CTGCAG 1 cut(s) 959
PsuI RGATCY 3 cut(s) 76, 123, 1150
RsaI GTAC 2 cut(s) 243, 1333
RsaNI GTAC 2 cut(s) 242, 1332
SaqAI TTAA 1 cut(s) 1531
SatI GCNGC 7 cut(s) 395, 442, 662, 894, 897, 1086, 1293
Sau96I GGNCC 6 cut(s) 331, 718, 969, 1209, 1378, 1425
SchI GAGTC 4 cut(s) 23, 23, 418, 762
ScrFI CCNGG 4 cut(s) 55, 191, 1313, 1336
SduI GDGCHC 6 cut(s) 94, 108, 181, 187, 308, 355
SfaNI GCATC 3 cut(s) 190, 700, 862
SfcI CTRYAG 1 cut(s) 955
SinI GGWCC 4 cut(s) 331, 718, 969, 1425
SpeI ACTAGT 1 cut(s) 173
Sse9I AATT 5 cut(s) 528, 571, 607, 688, 906
SsiI CCGC 8 cut(s) 203, 441, 586, 713, 727, 848, 1400, 1481
SspMI CTAG 3 cut(s) 174, 209, 1122
StyD4I CCNGG 4 cut(s) 53, 189, 1311, 1334
StyI CCWWGG 3 cut(s) 129, 721, 1116
TaaI ACNGT 2 cut(s) 226, 973
TaiI ACGT 3 cut(s) 820, 871, 1513
TaqI TCGA 6 cut(s) 374, 646, 1032, 1045, 1220, 1225
TasI AATT 5 cut(s) 528, 571, 607, 688, 906
TauI GCSGC 1 cut(s) 444
TfiI GAWTC 2 cut(s) 951, 1222
Tru1I TTAA 1 cut(s) 1531
Tru9I TTAA 1 cut(s) 1531
TscAI CASTG 4 cut(s) 164, 519, 603, 1152
TseI GCWGC 6 cut(s) 394, 661, 893, 896, 1085, 1292
TspDTI ATGAA 2 cut(s) 539, 620
TspGWI ACGGA 1 cut(s) 583
TspRI CASTG 4 cut(s) 164, 519, 603, 1152
VpaK11BI GGWCC 4 cut(s) 331, 718, 969, 1425
XagI CCTNNNNNAGG 1 cut(s) 194
XapI RAATTY 1 cut(s) 906
XbaI TCTAGA 1 cut(s) 208
XcmI CCANNNNNNNNNTGG 1 cut(s) 550
XspI CTAG 3 cut(s) 174, 209, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.