Rmu_sc0004823.1_g000046

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004823.1
OG0000075
Physical Location & Seq
Reverse (-)
129662 .. 131261
1600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004823.1_g000046.1.cds

Sequence Viewer

Length: 1080 bp
atgtctcgatggcagcagccgaggttagtggcgctcctcaaggccttagaggggctggaagtgatgagggtgtccaggtgcctgagatggagatctctgtggtgtcgggcaagggagaggaagcttaaggtacttgtgtgtactgatggcactgggttgaggaagagaacggcttcacaacttcgtctagggagtctccccgtgggtgtgagtatcgatactcatgggggaaaaagatcccgagttgaggatacgcgctcgacaaataagggttcccgccactctcgggaagaggttgttagaagtgtctcgcatatggtgttgcggatagcccgatcatgcatatggtggctgatctacgcaactgtcaccgggaccgcagaggccgaagaggccgttgcccccttgaaggaatccaatttagacctgaccggtaagctgcagcgggctgaggtgggtttaaaggccttggaagaggtaagggtagaggtcttcactactgaagagcggttgctagaattggagagacaagtgcaagacggcgatgctgagttggagctccgtagggcggtcttagagagtttatctccttatattgatcacattgctgtcgagaaggatgcagagttgaagcgattaaggaaggaggtggatgacgggcgatctcgggctagtaccttctccaatgattgcattagtttgcgagctgcgaccgagacccattttgtcaagcttcagaaggccaagcgagacggtgcagcaatggctgtggatccttatcttttgtcatccaactttaagaagaagatgaacaaagccttctcggatggggcattgcattcaattagcgatggccaacgctgcaagtggtggtcgagggggagggattgttatccaagagccgtcactgtcgtggagcgcaacgctagccacttcagggaccgcaaggctgggagtgctcgcacaagtgagcaggaagatactcttgtgatggatgccgaggtagggccagagggcaagaacgctggggagcgagacatgactggggagcaggcgcgcagtgtcaagggcgagacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

359

Amino Acids

40.46

Weight (kDa)

9.43

Isoelectric Point (pI)

50.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 78
AccBSI CCGCTC 1 cut(s) 508
AccII CGCG 2 cut(s) 256, 1057
AciI CCGC 7 cut(s) 277, 325, 378, 445, 508, 569, 943
AclWI GGATC 3 cut(s) 231, 767, 780
AcoI YGGCCR 1 cut(s) 853
AcuI CTGAAG 3 cut(s) 522, 719, 919
AfaI GTAC 3 cut(s) 132, 142, 676
AfiI CCNNNNNNNGG 7 cut(s) 51, 247, 286, 409, 568, 937, 1005
AflII CTTAAG 1 cut(s) 125
AgeI ACCGGT 1 cut(s) 431
AgsI TTSAA 3 cut(s) 409, 631, 843
AjnI CCWGG 1 cut(s) 74
AleI CACNNNNGTG 1 cut(s) 911
AluBI AGCT 5 cut(s) 124, 439, 559, 707, 733
AluI AGCT 5 cut(s) 124, 439, 559, 707, 733
Alw21I GWGCWC 2 cut(s) 561, 961
Alw26I GTCTC 8 cut(s) 9, 200, 313, 520, 710, 744, 1029, 1067
AlwI GGATC 3 cut(s) 231, 767, 780
Ama87I CYCGRG 3 cut(s) 240, 285, 666
AoxI GGCC 7 cut(s) 42, 384, 393, 465, 741, 853, 1007
ApeKI GCWGC 7 cut(s) 13, 16, 439, 442, 707, 758, 861
AsiGI ACCGGT 1 cut(s) 431
Asp700I GAANNNNTTC 1 cut(s) 172
AspLEI GCGC 5 cut(s) 34, 258, 921, 1057, 1059
AspS9I GGNCC 3 cut(s) 375, 940, 1007
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 1 cut(s) 361
AsuNHI GCTAGC 1 cut(s) 926
AvaI CYCGRG 3 cut(s) 240, 285, 666
AvaII GGWCC 2 cut(s) 375, 940
BaeI ACNNNNGTAYC 4 cut(s) 122, 155, 972, 1005
BalI TGGCCA 1 cut(s) 855
BamHI GGATCC 1 cut(s) 772
BanI GGYRCC 1 cut(s) 78
BanII GRGCYC 1 cut(s) 561
BbsI GAAGAC 1 cut(s) 484
Bbv12I GWGCWC 2 cut(s) 561, 961
BbvCI CCTCAGC 1 cut(s) 450
BbvI GCAGC 7 cut(s) 25, 28, 426, 454, 694, 770, 848
BccI CCATC 6 cut(s) 3, 81, 140, 821, 845, 985
BceAI ACGGC 4 cut(s) 186, 380, 556, 887
BcgI CGANNNNNNTGC 2 cut(s) 602, 636
BciT130I CCWGG 1 cut(s) 76
BciVI GTATCC 1 cut(s) 244
BclI TGATCA 1 cut(s) 598
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 8 cut(s) 9, 200, 313, 520, 710, 744, 1029, 1067
BfaI CTAG 4 cut(s) 188, 515, 672, 927
BfmI CTRYAG 1 cut(s) 440
BfoI RGCGCY 1 cut(s) 35
BfrI CTTAAG 1 cut(s) 125
BfuI GTATCC 1 cut(s) 244
BglI GCCNNNNNGGC 1 cut(s) 392
BglII AGATCT 1 cut(s) 92
BisI GCNGC 7 cut(s) 14, 17, 440, 443, 708, 759, 862
BlsI GCNGC 7 cut(s) 15, 18, 441, 444, 709, 760, 863
Bme1390I CCNGG 2 cut(s) 76, 373
Bme18I GGWCC 2 cut(s) 375, 940
BmeT110I CYCGRG 3 cut(s) 240, 285, 666
BmgT120I GGNCC 3 cut(s) 375, 940, 1007
BmiI GGNNCC 5 cut(s) 80, 274, 376, 774, 941
BmrFI CCNGG 2 cut(s) 76, 373
BmrI ACTGGG 2 cut(s) 162, 1053
BmsI GCATC 3 cut(s) 535, 610, 985
BmtI GCTAGC 1 cut(s) 930
BmuI ACTGGG 2 cut(s) 162, 1053
BpiI GAAGAC 1 cut(s) 484
BplI GAGNNNNNCTC 2 cut(s) 571, 603
Bpu10I CCTNAGC 1 cut(s) 450
BpuEI CTTGAG 1 cut(s) 23
BpuMI CCSGG 1 cut(s) 373
Bsa29I ATCGAT 1 cut(s) 216
BsaBI GATNNNNATC 3 cut(s) 91, 777, 891
BsaI GGTCTC 1 cut(s) 710
BsaJI CCNNGG 4 cut(s) 20, 201, 468, 999
BsaWI WCCGGW 1 cut(s) 431
BsaXI ACNNNNNCTCC 2 cut(s) 874, 904
Bsc4I CCNNNNNNNGG 7 cut(s) 51, 247, 286, 409, 568, 937, 1005
Bse118I RCCGGY 1 cut(s) 431
Bse1I ACTGG 2 cut(s) 157, 1048
Bse3DI GCAATG 3 cut(s) 603, 768, 833
Bse8I GATNNNNATC 3 cut(s) 91, 777, 891
BseBI CCWGG 1 cut(s) 76
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 4 cut(s) 20, 201, 468, 999
BseGI GGATG 5 cut(s) 625, 658, 788, 832, 1000
BseJI GATNNNNATC 3 cut(s) 91, 777, 891
BseLI CCNNNNNNNGG 7 cut(s) 51, 247, 286, 409, 568, 937, 1005
BseMI GCAATG 3 cut(s) 603, 768, 833
BseMII CTCAG 3 cut(s) 74, 441, 540
BseNI ACTGG 2 cut(s) 157, 1048
BsePI GCGCGC 1 cut(s) 1055
BseRI GAGGAG 1 cut(s) 26
BseXI GCAGC 7 cut(s) 25, 28, 426, 454, 694, 770, 848
BseYI CCCAGC 2 cut(s) 950, 1025
BsgI GTGCAG 1 cut(s) 777
Bsh1236I CGCG 2 cut(s) 256, 1057
Bsh1285I CGRYCG 1 cut(s) 714
BshFI GGCC 7 cut(s) 44, 386, 395, 467, 743, 855, 1009
BshNI GGYRCC 1 cut(s) 78
BshTI ACCGGT 1 cut(s) 431
BshVI ATCGAT 1 cut(s) 216
BsiEI CGRYCG 1 cut(s) 714
BsiHKAI GWGCWC 2 cut(s) 561, 961
BsiHKCI CYCGRG 3 cut(s) 240, 285, 666
BsiSI CCGG 2 cut(s) 372, 432
BslFI GGGAC 2 cut(s) 388, 953
BslI CCNNNNNNNGG 7 cut(s) 51, 247, 286, 409, 568, 937, 1005
BsmAI GTCTC 8 cut(s) 9, 200, 313, 520, 710, 744, 1029, 1067
BsmBI CGTCTC 1 cut(s) 744
BsmFI GGGAC 2 cut(s) 388, 953
BsmI GAATGC 1 cut(s) 838
BsnI GGCC 7 cut(s) 44, 386, 395, 467, 743, 855, 1009
Bso31I GGTCTC 1 cut(s) 710
BsoBI CYCGRG 3 cut(s) 240, 285, 666
Bsp1286I GDGCHC 2 cut(s) 561, 961
Bsp143I GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
BspACI CCGC 7 cut(s) 277, 325, 378, 445, 508, 569, 943
BspANI GGCC 7 cut(s) 44, 386, 395, 467, 743, 855, 1009
BspCNI CTCAG 3 cut(s) 75, 442, 541
BspDI ATCGAT 1 cut(s) 216
BspFNI CGCG 2 cut(s) 256, 1057
BspLI GGNNCC 5 cut(s) 80, 274, 376, 774, 941
BspMAI CTGCAG 1 cut(s) 444
BspOI GCTAGC 1 cut(s) 930
BspPI GGATC 3 cut(s) 231, 767, 780
BspQI GCTCTTC 1 cut(s) 498
BspT107I GGYRCC 1 cut(s) 78
BspTI CTTAAG 1 cut(s) 125
BspTNI GGTCTC 1 cut(s) 710
BsrBI CCGCTC 1 cut(s) 508
BsrDI GCAATG 3 cut(s) 603, 768, 833
BsrFI RCCGGY 1 cut(s) 431
BsrI ACTGG 2 cut(s) 157, 1048
BssAI RCCGGY 1 cut(s) 431
BssECI CCNNGG 4 cut(s) 20, 201, 468, 999
BssHII GCGCGC 1 cut(s) 1055
BssMI GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
BssT1I CCWWGG 1 cut(s) 468
Bst2UI CCWGG 1 cut(s) 76
Bst4CI ACNGT 3 cut(s) 367, 755, 910
Bst6I CTCTTC 5 cut(s) 158, 285, 384, 468, 498
BstAFI CTTAAG 1 cut(s) 125
BstC8I GCNNGC 6 cut(s) 447, 705, 928, 961, 1053, 1057
BstDEI CTNAG 5 cut(s) 46, 83, 450, 549, 574
BstDSI CCRYGG 1 cut(s) 201
BstF5I GGATG 5 cut(s) 625, 658, 788, 832, 1000
BstFNI CGCG 2 cut(s) 256, 1057
BstH2I RGCGCY 1 cut(s) 35
BstHHI GCGC 5 cut(s) 34, 258, 921, 1057, 1059
BstKTI GATC 7 cut(s) 95, 239, 338, 357, 601, 665, 775
BstMAI GTCTC 8 cut(s) 9, 200, 313, 520, 710, 744, 1029, 1067
BstMBI GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
BstMCI CGRYCG 1 cut(s) 714
BstMWI GCNNNNNNNGC 5 cut(s) 392, 764, 861, 927, 956
BstNI CCWGG 1 cut(s) 76
BstSCI CCNGG 2 cut(s) 74, 371
BstSFI CTRYAG 1 cut(s) 440
BstUI CGCG 2 cut(s) 256, 1057
BstV1I GCAGC 7 cut(s) 25, 28, 426, 454, 694, 770, 848
BstV2I GAAGAC 1 cut(s) 484
BstX2I RGATCY 3 cut(s) 92, 236, 772
BstYI RGATCY 3 cut(s) 92, 236, 772
Bsu15I ATCGAT 1 cut(s) 216
BsuI GTATCC 1 cut(s) 244
BsuRI GGCC 7 cut(s) 44, 386, 395, 467, 743, 855, 1009
BsuTUI ATCGAT 1 cut(s) 216
BtgI CCRYGG 1 cut(s) 201
BtgZI GCGATG 2 cut(s) 558, 864
BtsCI GGATG 5 cut(s) 625, 658, 788, 832, 1000
BtsI GCAGTG 1 cut(s) 1066
BtsIMutI CAGTG 3 cut(s) 150, 906, 1066
Cac8I GCNNGC 6 cut(s) 447, 705, 928, 961, 1053, 1057
CfoI GCGC 5 cut(s) 34, 258, 921, 1057, 1059
Cfr10I RCCGGY 1 cut(s) 431
Cfr13I GGNCC 3 cut(s) 375, 940, 1007
ClaI ATCGAT 1 cut(s) 216
Csp6I GTAC 3 cut(s) 131, 141, 675
CspAI ACCGGT 1 cut(s) 431
CspCI CAANNNNNGTGG 2 cut(s) 750, 785
CviAII CATG 3 cut(s) 224, 339, 1039
CviQI GTAC 3 cut(s) 131, 141, 675
DdeI CTNAG 5 cut(s) 46, 83, 450, 549, 574
DpnI GATC 7 cut(s) 94, 238, 337, 356, 600, 664, 774
DpnII GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
DraI TTTAAA 1 cut(s) 462
EaeI YGGCCR 1 cut(s) 853
Eam1104I CTCTTC 5 cut(s) 158, 285, 384, 468, 498
EarI CTCTTC 5 cut(s) 158, 285, 384, 468, 498
Ecl136II GAGCTC 1 cut(s) 559
Eco130I CCWWGG 1 cut(s) 468
Eco147I AGGCCT 2 cut(s) 44, 467
Eco24I GRGCYC 1 cut(s) 561
Eco31I GGTCTC 1 cut(s) 710
Eco47I GGWCC 2 cut(s) 375, 940
Eco53kI GAGCTC 1 cut(s) 559
Eco57I CTGAAG 3 cut(s) 522, 719, 919
Eco88I CYCGRG 3 cut(s) 240, 285, 666
EcoICRI GAGCTC 1 cut(s) 559
EcoRII CCWGG 1 cut(s) 74
EcoT14I CCWWGG 1 cut(s) 468
EcoT22I ATGCAT 1 cut(s) 344
EcoT38I GRGCYC 1 cut(s) 561
ErhI CCWWGG 1 cut(s) 468
Esp3I CGTCTC 1 cut(s) 744
FaeI CATG 3 cut(s) 227, 342, 1042
FaiI YATR 9 cut(s) 225, 315, 317, 340, 344, 346, 594, 1040, 1078
FalI AAGNNNNNCTT 2 cut(s) 969, 1001
FaqI GGGAC 2 cut(s) 388, 953
FatI CATG 3 cut(s) 223, 338, 1038
FauI CCCGC 2 cut(s) 284, 438
FauNDI CATATG 2 cut(s) 315, 344
FbaI TGATCA 1 cut(s) 598
Fnu4HI GCNGC 7 cut(s) 14, 17, 440, 443, 708, 759, 862
FokI GGATG 5 cut(s) 632, 665, 775, 839, 1007
FriOI GRGCYC 1 cut(s) 561
Fsp4HI GCNGC 7 cut(s) 14, 17, 440, 443, 708, 759, 862
FspBI CTAG 4 cut(s) 188, 515, 672, 927
GlaI GCGC 5 cut(s) 33, 257, 920, 1056, 1058
GluI GCNGC 7 cut(s) 14, 17, 440, 443, 708, 759, 862
GsaI CCCAGC 2 cut(s) 954, 1029
HaeII RGCGCY 1 cut(s) 35
HaeIII GGCC 7 cut(s) 44, 386, 395, 467, 743, 855, 1009
HapII CCGG 2 cut(s) 372, 432
HhaI GCGC 5 cut(s) 34, 258, 921, 1057, 1059
Hin1II CATG 3 cut(s) 227, 342, 1042
Hin6I GCGC 5 cut(s) 32, 256, 919, 1055, 1057
HinP1I GCGC 5 cut(s) 32, 256, 919, 1055, 1057
HindIII AAGCTT 2 cut(s) 122, 731
HinfI GANTC 2 cut(s) 193, 413
HpaII CCGG 2 cut(s) 372, 432
HphI GGTGA 1 cut(s) 361
Hpy166II GTNNAC 1 cut(s) 141
Hpy188I TCNGA 2 cut(s) 738, 826
Hpy188III TCNNGA 4 cut(s) 6, 240, 287, 613
Hpy8I GTNNAC 1 cut(s) 141
HpyAV CCTTC 6 cut(s) 403, 610, 637, 688, 733, 829
HpyCH4III ACNGT 3 cut(s) 367, 755, 910
HpyCH4V TGCA 8 cut(s) 342, 442, 535, 623, 693, 758, 838, 864
HpyF10VI GCNNNNNNNGC 5 cut(s) 392, 764, 861, 927, 956
HpyF3I CTNAG 5 cut(s) 46, 83, 450, 549, 574
Hsp92II CATG 3 cut(s) 227, 342, 1042
HspAI GCGC 5 cut(s) 32, 256, 919, 1055, 1057
Ksp22I TGATCA 1 cut(s) 598
Kzo9I GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
LguI GCTCTTC 1 cut(s) 498
LmnI GCTCC 6 cut(s) 39, 556, 564, 916, 1030, 1048
Lsp1109I GCAGC 7 cut(s) 25, 28, 426, 454, 694, 770, 848
LweI GCATC 3 cut(s) 535, 610, 985
MaeI CTAG 4 cut(s) 188, 515, 672, 927
MaeIII GTNAC 2 cut(s) 367, 904
MalI GATC 7 cut(s) 94, 238, 337, 356, 600, 664, 774
MbiI CCGCTC 1 cut(s) 508
MboI GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
MboII GAAGA 9 cut(s) 175, 302, 401, 484, 485, 515, 814, 817, 989
MflI RGATCY 3 cut(s) 92, 236, 772
MhlI GDGCHC 2 cut(s) 561, 961
MlsI TGGCCA 1 cut(s) 855
MluCI AATT 3 cut(s) 418, 518, 843
MluNI TGGCCA 1 cut(s) 855
MlyI GAGTC 1 cut(s) 202
MmeI TCCRAC 2 cut(s) 534, 816
Mox20I TGGCCA 1 cut(s) 855
Mph1103I ATGCAT 1 cut(s) 344
MroXI GAANNNNTTC 1 cut(s) 172
MscI TGGCCA 1 cut(s) 855
MseI TTAA 4 cut(s) 126, 461, 638, 798
MslI CAYNNNNRTG 2 cut(s) 343, 911
Msp20I TGGCCA 1 cut(s) 855
MspA1I CMGCKG 1 cut(s) 445
MspCI CTTAAG 1 cut(s) 125
MspI CCGG 2 cut(s) 372, 432
MspR9I CCNGG 2 cut(s) 76, 373
Mva1269I GAATGC 1 cut(s) 838
MvaI CCWGG 1 cut(s) 76
MvnI CGCG 2 cut(s) 256, 1057
MwoI GCNNNNNNNGC 5 cut(s) 392, 764, 861, 927, 956
NciI CCSGG 1 cut(s) 373
NdeI CATATG 2 cut(s) 315, 344
NdeII GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
NheI GCTAGC 1 cut(s) 926
NlaIII CATG 3 cut(s) 227, 342, 1042
NlaIV GGNNCC 5 cut(s) 80, 274, 376, 774, 941
NmeAIII GCCGAG 2 cut(s) 45, 1024
NmuCI GTSAC 2 cut(s) 367, 904
NsiI ATGCAT 1 cut(s) 344
OliI CACNNNNGTG 1 cut(s) 911
PauI GCGCGC 1 cut(s) 1055
PceI AGGCCT 2 cut(s) 44, 467
PciSI GCTCTTC 1 cut(s) 498
PctI GAATGC 1 cut(s) 838
PdmI GAANNNNTTC 1 cut(s) 172
PfeI GAWTC 1 cut(s) 413
PinAI ACCGGT 1 cut(s) 431
PkrI GCNGC 7 cut(s) 15, 18, 441, 444, 709, 760, 863
PleI GAGTC 1 cut(s) 201
PpsI GAGTC 1 cut(s) 201
Psp124BI GAGCTC 1 cut(s) 561
Psp6I CCWGG 1 cut(s) 74
PspFI CCCAGC 2 cut(s) 950, 1025
PspGI CCWGG 1 cut(s) 74
PspN4I GGNNCC 5 cut(s) 80, 274, 376, 774, 941
PspPI GGNCC 3 cut(s) 375, 940, 1007
PstI CTGCAG 1 cut(s) 444
PsuI RGATCY 3 cut(s) 92, 236, 772
PteI GCGCGC 1 cut(s) 1055
RsaI GTAC 3 cut(s) 132, 142, 676
RsaNI GTAC 3 cut(s) 131, 141, 675
RseI CAYNNNNRTG 2 cut(s) 343, 911
SacI GAGCTC 1 cut(s) 561
SapI GCTCTTC 1 cut(s) 498
SaqAI TTAA 4 cut(s) 126, 461, 638, 798
SatI GCNGC 7 cut(s) 14, 17, 440, 443, 708, 759, 862
Sau3AI GATC 7 cut(s) 92, 236, 335, 354, 598, 662, 772
Sau96I GGNCC 3 cut(s) 375, 940, 1007
SchI GAGTC 1 cut(s) 202
ScrFI CCNGG 2 cut(s) 76, 373
SduI GDGCHC 2 cut(s) 561, 961
SfaNI GCATC 3 cut(s) 535, 610, 985
SfcI CTRYAG 1 cut(s) 440
SfiI GGCCNNNNNGGCC 1 cut(s) 392
SinI GGWCC 2 cut(s) 375, 940
SmiMI CAYNNNNRTG 2 cut(s) 343, 911
SmlI CTYRAG 2 cut(s) 38, 125
SmoI CTYRAG 2 cut(s) 38, 125
Sse9I AATT 3 cut(s) 418, 518, 843
SseBI AGGCCT 2 cut(s) 44, 467
SsiI CCGC 7 cut(s) 277, 325, 378, 445, 508, 569, 943
SspMI CTAG 4 cut(s) 188, 515, 672, 927
SstI GAGCTC 1 cut(s) 561
StuI AGGCCT 2 cut(s) 44, 467
StyD4I CCNGG 2 cut(s) 74, 371
StyI CCWWGG 1 cut(s) 468
TaaI ACNGT 3 cut(s) 367, 755, 910
TaqI TCGA 5 cut(s) 7, 216, 260, 612, 875
TaqII GACCGA 1 cut(s) 728
TasI AATT 3 cut(s) 418, 518, 843
TatI WGTACW 1 cut(s) 140
TfiI GAWTC 1 cut(s) 413
Tru1I TTAA 4 cut(s) 126, 461, 638, 798
Tru9I TTAA 4 cut(s) 126, 461, 638, 798
TscAI CASTG 3 cut(s) 157, 913, 1066
TseFI GTSAC 2 cut(s) 367, 904
TseI GCWGC 7 cut(s) 13, 16, 439, 442, 707, 758, 861
Tsp45I GTSAC 2 cut(s) 367, 904
TspDTI ATGAA 1 cut(s) 824
TspGWI ACGGA 1 cut(s) 551
TspRI CASTG 3 cut(s) 157, 913, 1066
Vha464I CTTAAG 1 cut(s) 125
VpaK11BI GGWCC 2 cut(s) 375, 940
XmnI GAANNNNTTC 1 cut(s) 172
XspI CTAG 4 cut(s) 188, 515, 672, 927
Zsp2I ATGCAT 1 cut(s) 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.