Rroxscaffold_1G00030660

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000075
Physical Location & Seq
Forward (+)
40861238 .. 40863547
2310 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00030660.1

Sequence Viewer

Length: 783 bp
ATGGGAGCCGATTATCGAGGATTTACCGTCCGATATTTACTCCCGATTGAGGAGGAAGCGGTGTCTCGTAGGGTGATCCGTGGCGAGAATCCCCGATATGTGGAGCAAGATACTCCGCCGACCCGAGTAGAGGAGAAGGGCATTATGACGGTTTTGGCCAAGTTCCGGAGGGAGGAGGGGTTTTATCGCCTTTGTAGGTTAGCGATATACGAGAGGTGTGAGTTGGGGAGGCATCCTACTACCACCAAGAGTGACGCCCTCTATGCCGACGTGAATACCGATGCCATCATCGAGGAGCTACTAAAAGACTCGCAGGCGGTGAGACATTGCAATGTACACGGCGACAAGAAGGCTAGCCGCAGGTTATTTCCATGGATATTGGGGAAGCGGAAGTGTGACGAGTCAAGGTGTGGGTGTCTCGGCGGCGGTGGGCGAGGTTGGGGGGTCGCTTTGCAAGGTCCCCAAGGCGGTGGCGATGATGAGGGTGTCCGGTGCCCGAGAAGGGATGGAATTGGAGCGGTCGGCCGGGCAATAGAGGAGTCTCGGCGGGCGGAAGCTAAGGATGCGCCGCCCCTCGAGGTGTCAAATTTGGACTTGACCACCAAGTTGCGGCGGGCTGAACTTGGTTTGAAAGCCCCGAGGAGGTTAGGGCCCGGGTCCGCATTTGCTAAAGAGCGGCAAGTCGGCGCCTTGCAAAGAGAGTTTGACTACTTAAGGGTCATTGAGCACCAAGCCGGCGAGAGGGATGTGGAGCTGGAGCGATTAAGGAAGGAGGTGGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

260

Amino Acids

29.26

Weight (kDa)

8.82

Isoelectric Point (pI)

56.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 575
Acc36I ACCTGC 1 cut(s) 351
AccB1I GGYRCC 2 cut(s) 492, 686
AccBSI CCGCTC 2 cut(s) 518, 676
AccIII TCCGGA 1 cut(s) 165
AclWI GGATC 1 cut(s) 70
AcoI YGGCCR 2 cut(s) 156, 523
AcsI RAATTY 1 cut(s) 586
AcyI GRCGYC 2 cut(s) 255, 687
AfaI GTAC 1 cut(s) 336
AflII CTTAAG 1 cut(s) 712
AgsI TTSAA 1 cut(s) 631
AjiI CACGTC 1 cut(s) 271
AluBI AGCT 3 cut(s) 298, 557, 754
AluI AGCT 3 cut(s) 298, 557, 754
Alw21I GWGCWC 1 cut(s) 729
Alw26I GTCTC 4 cut(s) 69, 316, 422, 546
AlwI GGATC 1 cut(s) 70
Ama87I CYCGRG 5 cut(s) 123, 496, 575, 637, 653
Aor13HI TCCGGA 1 cut(s) 165
AoxI GGCC 3 cut(s) 156, 523, 650
ApaI GGGCCC 1 cut(s) 654
ApoI RAATTY 1 cut(s) 586
AspLEI GCGC 2 cut(s) 568, 689
AspS9I GGNCC 4 cut(s) 458, 650, 651, 657
AsuC2I CCSGG 3 cut(s) 527, 654, 655
AsuHPI GGTGA 2 cut(s) 85, 331
AsuNHI GCTAGC 1 cut(s) 353
AvaI CYCGRG 5 cut(s) 123, 496, 575, 637, 653
AvaII GGWCC 2 cut(s) 458, 657
BaeGI GKGCMC 2 cut(s) 497, 654
BalI TGGCCA 1 cut(s) 158
BanI GGYRCC 2 cut(s) 492, 686
BanII GRGCYC 1 cut(s) 654
Bbv12I GWGCWC 1 cut(s) 729
BccI CCATC 2 cut(s) 293, 500
BceAI ACGGC 1 cut(s) 355
BcnI CCSGG 3 cut(s) 527, 654, 655
BcoDI GTCTC 4 cut(s) 69, 316, 422, 546
BfaI CTAG 2 cut(s) 354, 781
BfoI RGCGCY 1 cut(s) 690
BfrI CTTAAG 1 cut(s) 712
BfuAI ACCTGC 1 cut(s) 351
BisI GCNGC 5 cut(s) 358, 424, 569, 611, 677
BlsI GCNGC 5 cut(s) 359, 425, 570, 612, 678
Bme1390I CCNGG 3 cut(s) 527, 654, 655
Bme18I GGWCC 2 cut(s) 458, 657
BmeT110I CYCGRG 5 cut(s) 123, 496, 575, 637, 653
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 4 cut(s) 458, 650, 651, 657
BmiI GGNNCC 6 cut(s) 7, 460, 494, 652, 658, 688
BmrFI CCNGG 3 cut(s) 527, 654, 655
BmsI GCATC 3 cut(s) 241, 271, 553
BmtI GCTAGC 1 cut(s) 357
BpmI CTGGAG 1 cut(s) 776
Bpu10I CCTNAGC 1 cut(s) 558
BpuMI CCSGG 3 cut(s) 527, 654, 655
BsaHI GRCGYC 2 cut(s) 255, 687
BsaJI CCNNGG 5 cut(s) 79, 371, 463, 638, 653
BsaWI WCCGGW 2 cut(s) 165, 489
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bse118I RCCGGY 1 cut(s) 734
Bse3DI GCAATG 2 cut(s) 325, 337
BseAI TCCGGA 1 cut(s) 165
BseDI CCNNGG 5 cut(s) 79, 371, 463, 638, 653
BseGI GGATG 4 cut(s) 232, 511, 568, 751
BseMI GCAATG 2 cut(s) 325, 337
BseRI GAGGAG 6 cut(s) 65, 146, 188, 308, 551, 655
BseSI GKGCMC 2 cut(s) 497, 654
BseX3I CGGCCG 1 cut(s) 523
Bsh1285I CGRYCG 2 cut(s) 522, 526
BshFI GGCC 3 cut(s) 158, 525, 652
BshNI GGYRCC 2 cut(s) 492, 686
BsiEI CGRYCG 2 cut(s) 522, 526
BsiHKAI GWGCWC 1 cut(s) 729
BsiHKCI CYCGRG 5 cut(s) 123, 496, 575, 637, 653
BsiSI CCGG 5 cut(s) 166, 490, 526, 654, 735
BslFI GGGAC 1 cut(s) 444
BsmAI GTCTC 4 cut(s) 69, 316, 422, 546
BsmFI GGGAC 1 cut(s) 444
BsnI GGCC 3 cut(s) 158, 525, 652
BsoBI CYCGRG 5 cut(s) 123, 496, 575, 637, 653
Bsp120I GGGCCC 1 cut(s) 650
Bsp1286I GDGCHC 3 cut(s) 497, 654, 729
Bsp13I TCCGGA 1 cut(s) 165
Bsp1407I TGTACA 1 cut(s) 334
Bsp143I GATC 1 cut(s) 75
Bsp19I CCATGG 1 cut(s) 371
BspANI GGCC 3 cut(s) 158, 525, 652
BspEI TCCGGA 1 cut(s) 165
BspLI GGNNCC 6 cut(s) 7, 460, 494, 652, 658, 688
BspMI ACCTGC 1 cut(s) 351
BspOI GCTAGC 1 cut(s) 357
BspPI GGATC 1 cut(s) 70
BspT107I GGYRCC 2 cut(s) 492, 686
BspTI CTTAAG 1 cut(s) 712
BsrBI CCGCTC 2 cut(s) 518, 676
BsrDI GCAATG 2 cut(s) 325, 337
BsrFI RCCGGY 1 cut(s) 734
BsrGI TGTACA 1 cut(s) 334
BssAI RCCGGY 1 cut(s) 734
BssECI CCNNGG 5 cut(s) 79, 371, 463, 638, 653
BssMI GATC 1 cut(s) 75
BssNI GRCGYC 2 cut(s) 255, 687
BssT1I CCWWGG 2 cut(s) 371, 463
Bst4CI ACNGT 2 cut(s) 28, 151
BstACI GRCGYC 2 cut(s) 255, 687
BstAFI CTTAAG 1 cut(s) 712
BstAUI TGTACA 1 cut(s) 334
BstC8I GCNNGC 5 cut(s) 315, 355, 549, 615, 736
BstDEI CTNAG 1 cut(s) 558
BstDSI CCRYGG 2 cut(s) 79, 371
BstF5I GGATG 4 cut(s) 232, 511, 568, 751
BstH2I RGCGCY 1 cut(s) 690
BstHHI GCGC 2 cut(s) 568, 689
BstKTI GATC 1 cut(s) 78
BstMAI GTCTC 4 cut(s) 69, 316, 422, 546
BstMBI GATC 1 cut(s) 75
BstMCI CGRYCG 2 cut(s) 522, 526
BstMWI GCNNNNNNNGC 2 cut(s) 263, 563
BstSCI CCNGG 3 cut(s) 525, 652, 653
BstSLI GKGCMC 2 cut(s) 497, 654
BstXI CCANNNNNNTGG 1 cut(s) 470
BstZI CGGCCG 1 cut(s) 523
BsuRI GGCC 3 cut(s) 158, 525, 652
BtgI CCRYGG 2 cut(s) 79, 371
BtgZI GCGATG 1 cut(s) 489
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 4 cut(s) 232, 511, 568, 751
BveI ACCTGC 1 cut(s) 351
Cac8I GCNNGC 5 cut(s) 315, 355, 549, 615, 736
CfoI GCGC 2 cut(s) 568, 689
Cfr10I RCCGGY 1 cut(s) 734
Cfr13I GGNCC 4 cut(s) 458, 650, 651, 657
Cfr9I CCCGGG 1 cut(s) 653
CseI GACGC 1 cut(s) 263
Csp6I GTAC 1 cut(s) 335
CviAII CATG 1 cut(s) 372
CviQI GTAC 1 cut(s) 335
DdeI CTNAG 1 cut(s) 558
DinI GGCGCC 1 cut(s) 688
DpnI GATC 1 cut(s) 77
DpnII GATC 1 cut(s) 75
EaeI YGGCCR 2 cut(s) 156, 523
EagI CGGCCG 1 cut(s) 523
EciI GGCGGA 2 cut(s) 105, 566
EclXI CGGCCG 1 cut(s) 523
Eco130I CCWWGG 2 cut(s) 371, 463
Eco24I GRGCYC 1 cut(s) 654
Eco47I GGWCC 2 cut(s) 458, 657
Eco52I CGGCCG 1 cut(s) 523
Eco88I CYCGRG 5 cut(s) 123, 496, 575, 637, 653
EcoO109I RGGNCCY 2 cut(s) 458, 650
EcoT14I CCWWGG 2 cut(s) 371, 463
EcoT38I GRGCYC 1 cut(s) 654
EgeI GGCGCC 1 cut(s) 688
EheI GGCGCC 1 cut(s) 688
ErhI CCWWGG 2 cut(s) 371, 463
FaeI CATG 1 cut(s) 375
FaiI YATR 5 cut(s) 99, 146, 208, 264, 373
FaqI GGGAC 1 cut(s) 444
FatI CATG 1 cut(s) 371
FauI CCCGC 2 cut(s) 540, 606
Fnu4HI GCNGC 5 cut(s) 358, 424, 569, 611, 677
FokI GGATG 4 cut(s) 219, 518, 575, 758
FriOI GRGCYC 1 cut(s) 654
Fsp4HI GCNGC 5 cut(s) 358, 424, 569, 611, 677
FspBI CTAG 2 cut(s) 354, 781
GlaI GCGC 2 cut(s) 567, 688
GluI GCNGC 5 cut(s) 358, 424, 569, 611, 677
GsuI CTGGAG 1 cut(s) 776
HaeII RGCGCY 1 cut(s) 690
HaeIII GGCC 3 cut(s) 158, 525, 652
HapII CCGG 5 cut(s) 166, 490, 526, 654, 735
HgaI GACGC 1 cut(s) 263
HhaI GCGC 2 cut(s) 568, 689
Hin1I GRCGYC 2 cut(s) 255, 687
Hin1II CATG 1 cut(s) 375
Hin6I GCGC 2 cut(s) 566, 687
HinP1I GCGC 2 cut(s) 566, 687
HinfI GANTC 4 cut(s) 88, 308, 401, 539
HpaII CCGG 5 cut(s) 166, 490, 526, 654, 735
HphI GGTGA 2 cut(s) 85, 331
Hpy166II GTNNAC 2 cut(s) 337, 778
Hpy188I TCNGA 1 cut(s) 32
Hpy188III TCNNGA 2 cut(s) 43, 166
Hpy8I GTNNAC 2 cut(s) 337, 778
Hpy99I CGWCG 1 cut(s) 272
HpyAV CCTTC 4 cut(s) 130, 343, 495, 763
HpyCH4III ACNGT 2 cut(s) 28, 151
HpyCH4IV ACGT 1 cut(s) 270
HpyCH4V TGCA 3 cut(s) 330, 454, 694
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 563
HpyF3I CTNAG 1 cut(s) 558
HpySE526I ACGT 1 cut(s) 270
Hsp92I GRCGYC 2 cut(s) 255, 687
Hsp92II CATG 1 cut(s) 375
HspAI GCGC 2 cut(s) 566, 687
KasI GGCGCC 1 cut(s) 686
Kpn2I TCCGGA 1 cut(s) 165
KroI GCCGGC 1 cut(s) 734
KroNI GCCGGC 1 cut(s) 736
Kzo9I GATC 1 cut(s) 75
LmnI GCTCC 6 cut(s) 5, 103, 295, 515, 751, 757
LpnPI CCDG 8 cut(s) 179, 299, 346, 503, 539, 667, 740, 748
LweI GCATC 3 cut(s) 241, 271, 553
MaeI CTAG 2 cut(s) 354, 781
MaeII ACGT 1 cut(s) 270
MaeIII GTNAC 2 cut(s) 251, 395
MalI GATC 1 cut(s) 77
MbiI CCGCTC 2 cut(s) 518, 676
MboI GATC 1 cut(s) 75
MhlI GDGCHC 3 cut(s) 497, 654, 729
MlsI TGGCCA 1 cut(s) 158
MluCI AATT 2 cut(s) 510, 586
MluNI TGGCCA 1 cut(s) 158
Mly113I GGCGCC 1 cut(s) 687
MlyI GAGTC 3 cut(s) 302, 410, 548
Mox20I TGGCCA 1 cut(s) 158
MroI TCCGGA 1 cut(s) 165
MroNI GCCGGC 1 cut(s) 734
MscI TGGCCA 1 cut(s) 158
MseI TTAA 2 cut(s) 713, 764
MslI CAYNNNNRTG 1 cut(s) 330
Msp20I TGGCCA 1 cut(s) 158
MspCI CTTAAG 1 cut(s) 712
MspI CCGG 5 cut(s) 166, 490, 526, 654, 735
MspR9I CCNGG 3 cut(s) 527, 654, 655
MwoI GCNNNNNNNGC 2 cut(s) 263, 563
NaeI GCCGGC 1 cut(s) 736
NarI GGCGCC 1 cut(s) 687
NciI CCSGG 3 cut(s) 527, 654, 655
NcoI CCATGG 1 cut(s) 371
NdeII GATC 1 cut(s) 75
NgoMIV GCCGGC 1 cut(s) 734
NheI GCTAGC 1 cut(s) 353
NlaIII CATG 1 cut(s) 375
NlaIV GGNNCC 6 cut(s) 7, 460, 494, 652, 658, 688
NmeAIII GCCGAG 2 cut(s) 399, 523
NmuCI GTSAC 2 cut(s) 251, 395
PaeR7I CTCGAG 1 cut(s) 575
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PdiI GCCGGC 1 cut(s) 736
PfeI GAWTC 1 cut(s) 88
PkrI GCNGC 5 cut(s) 359, 425, 570, 612, 678
PleI GAGTC 3 cut(s) 302, 409, 547
PluTI GGCGCC 1 cut(s) 690
PpsI GAGTC 3 cut(s) 302, 409, 547
PpuMI RGGWCCY 1 cut(s) 458
Psp5II RGGWCCY 1 cut(s) 458
PspN4I GGNNCC 6 cut(s) 7, 460, 494, 652, 658, 688
PspOMI GGGCCC 1 cut(s) 650
PspPI GGNCC 4 cut(s) 458, 650, 651, 657
PspPPI RGGWCCY 1 cut(s) 458
PspXI VCTCGAGB 1 cut(s) 575
RsaI GTAC 1 cut(s) 336
RsaNI GTAC 1 cut(s) 335
RseI CAYNNNNRTG 1 cut(s) 330
SaqAI TTAA 2 cut(s) 713, 764
SatI GCNGC 5 cut(s) 358, 424, 569, 611, 677
Sau3AI GATC 1 cut(s) 75
Sau96I GGNCC 4 cut(s) 458, 650, 651, 657
SchI GAGTC 3 cut(s) 302, 410, 548
ScrFI CCNGG 3 cut(s) 527, 654, 655
SduI GDGCHC 3 cut(s) 497, 654, 729
SfaNI GCATC 3 cut(s) 241, 271, 553
SfoI GGCGCC 1 cut(s) 688
Sfr274I CTCGAG 1 cut(s) 575
SinI GGWCC 2 cut(s) 458, 657
SlaI CTCGAG 1 cut(s) 575
SmaI CCCGGG 1 cut(s) 655
SmiMI CAYNNNNRTG 1 cut(s) 330
SmlI CTYRAG 2 cut(s) 575, 712
SmoI CTYRAG 2 cut(s) 575, 712
Sse9I AATT 2 cut(s) 510, 586
SspDI GGCGCC 1 cut(s) 686
SspMI CTAG 2 cut(s) 354, 781
StyD4I CCNGG 3 cut(s) 525, 652, 653
StyI CCWWGG 2 cut(s) 371, 463
TaaI ACNGT 2 cut(s) 28, 151
TaiI ACGT 1 cut(s) 273
TaqI TCGA 3 cut(s) 16, 291, 576
TasI AATT 2 cut(s) 510, 586
TatI WGTACW 1 cut(s) 334
TauI GCSGC 5 cut(s) 360, 426, 571, 613, 679
TfiI GAWTC 1 cut(s) 88
Tru1I TTAA 2 cut(s) 713, 764
Tru9I TTAA 2 cut(s) 713, 764
TseFI GTSAC 2 cut(s) 251, 395
Tsp45I GTSAC 2 cut(s) 251, 395
TspGWI ACGGA 1 cut(s) 68
TspMI CCCGGG 1 cut(s) 653
Vha464I CTTAAG 1 cut(s) 712
VpaK11BI GGWCC 2 cut(s) 458, 657
XapI RAATTY 1 cut(s) 586
XhoI CTCGAG 1 cut(s) 575
XmaI CCCGGG 1 cut(s) 653
XspI CTAG 2 cut(s) 354, 781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.