Rmu_sc0000433.1_g000035

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000433.1
OG0000075
Physical Location & Seq
Reverse (-)
136332 .. 138156
1825 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000433.1_g000035.1.cds

Sequence Viewer

Length: 1395 bp
atgttgttgcctgacgaagtgtatctgagctttcctgatactgtgctggaatatctcaatcagcgggccaaggaagaactcgatgccaaggggcatgaggttcggggtactcaagagccgacgcaagatccccaggagtcgcccattcaggttggggtagcgagcgagcgtcccctacccacagttgaagtggagttctccattgaggagttgctggaagagatggagcgacatcaaaacgatgccagcacccgtacccggctggtgcaagacgcaatgttggaacagctagatgctgtctttagcaaggatgttggcgctccaatctcgcagaaggccatcactgttgacaatggggaggcagaggtaaccagccaggccgttggcgagacaggtctgacgaccgaagttcctgaagtgcaaccgcagtctggagagggcatggttggggttgcccaggttaccgagactgggacccatggccaggatggtgagggggatggggtccgagtgtctgacacatgctcccctacggatgggactgcgcaggttgataatgtatcgtgctcaagatctacgagtgggggctcgcgaggttctcgcaatgaggttgccaggggtctcgcgcgcaccttgggagagattggaattactgaaagcgccattctgcatatggtcgctgacctgcagaactgtcatctcgtctggagcctcgtgaatatcgaagatccgcgcctagggtatcaggaggctcaggagaggttgataaggggggagctgaatgtcgagagggagcgagcccgtgagctgcagagtgtgttggaccagggccagatggaatgcgaggatatgaggcgagcaattgaagacgggatcatgagaaggatggagttggagcgatcactcgcagatggtctgaaagttgtggatcaggtgagggctcggattaccgaggctgaagagcacctgggagacttggaaaggcaagtcctggatcgcgatgccgagttggagcttcgtacggctgctttggaaagtttagctccctttcccgatcatgtggtggaattggaagggcaggttggtactctggaaagggaggttgacagtttgcgagacgttgagtttgagataggcaagagggaggcagagatggagcggcttaggaaggagctagcggagcaacaggctcgggccaataactttgccgaggatttcattctcttaggtgccgctgccgcgacacatttggatgagcttcacaaggctagccgagatggtgcggacaaggcggtggatctctatctccggccagcccactttcaagagaatatcaacaaagccttctcggatagggccttatacttgattcgagatggtatcactgccggttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

464

Amino Acids

51.3

Weight (kDa)

4.52

Isoelectric Point (pI)

41.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 546
Acc36I ACCTGC 3 cut(s) 538, 693, 1069
AccB1I GGYRCC 1 cut(s) 1229
AccBSI CCGCTC 1 cut(s) 1159
AccII CGCG 6 cut(s) 592, 626, 628, 733, 999, 1241
AciI CCGC 9 cut(s) 64, 425, 731, 1159, 1178, 1233, 1239, 1283, 1292
AclWI GGATC 6 cut(s) 122, 722, 881, 936, 1002, 1305
AcoI YGGCCR 2 cut(s) 481, 1310
AcuI CTGAAG 2 cut(s) 435, 978
AfaI GTAC 4 cut(s) 109, 256, 1021, 1087
AfiI CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 737
AgsI TTSAA 3 cut(s) 188, 866, 1325
AjnI CCWGG 8 cut(s) 132, 375, 456, 483, 614, 825, 966, 990
AjuI GAANNNNNNNTTGG 2 cut(s) 1065, 1097
AluBI AGCT 8 cut(s) 30, 289, 778, 808, 1015, 1043, 1174, 1258
AluI AGCT 8 cut(s) 30, 289, 778, 808, 1015, 1043, 1174, 1258
Alw21I GWGCWC 2 cut(s) 569, 966
Alw26I GTCTC 5 cut(s) 383, 461, 626, 966, 1110
AlwI GGATC 6 cut(s) 122, 722, 881, 936, 1002, 1305
Ama87I CYCGRG 1 cut(s) 1191
AoxI GGCC 8 cut(s) 66, 336, 378, 481, 829, 1194, 1310, 1356
ApeKI GCWGC 3 cut(s) 808, 1025, 1235
ArsI GACNNNNNNTTYG 2 cut(s) 1109, 1141
AspA2I CCTAGG 1 cut(s) 736
AspLEI GCGC 6 cut(s) 320, 547, 628, 630, 662, 735
AspS9I GGNCC 7 cut(s) 66, 474, 505, 823, 829, 1194, 1356
AsuC2I CCSGG 1 cut(s) 259
AsuHPI GGTGA 2 cut(s) 503, 946
AsuNHI GCTAGC 2 cut(s) 1174, 1268
AvaI CYCGRG 1 cut(s) 1191
AvaII GGWCC 3 cut(s) 474, 505, 823
AvrII CCTAGG 1 cut(s) 736
BalI TGGCCA 1 cut(s) 483
BanI GGYRCC 1 cut(s) 1229
BanII GRGCYC 3 cut(s) 590, 802, 943
BauI CACGAG 1 cut(s) 713
BbsI GAAGAC 1 cut(s) 873
Bbv12I GWGCWC 2 cut(s) 569, 966
BbvI GCAGC 3 cut(s) 795, 1012, 1222
BceAI ACGGC 2 cut(s) 365, 1038
BcgI CGANNNNNNTGC 4 cut(s) 83, 117, 1172, 1206
BciT130I CCWGG 8 cut(s) 134, 377, 458, 485, 616, 827, 968, 992
BcnI CCSGG 1 cut(s) 259
BcoDI GTCTC 5 cut(s) 383, 461, 626, 966, 1110
BfaI CTAG 4 cut(s) 290, 737, 1175, 1269
BfmI CTRYAG 2 cut(s) 686, 809
BfoI RGCGCY 2 cut(s) 321, 663
BfuAI ACCTGC 3 cut(s) 538, 693, 1069
BglII AGATCT 1 cut(s) 572
BisI GCNGC 6 cut(s) 809, 1026, 1160, 1233, 1236, 1239
BlnI CCTAGG 1 cut(s) 736
BlsI GCNGC 6 cut(s) 810, 1027, 1161, 1234, 1237, 1240
Bme1390I CCNGG 9 cut(s) 134, 259, 377, 458, 485, 616, 827, 968, 992
Bme18I GGWCC 3 cut(s) 474, 505, 823
BmeT110I CYCGRG 1 cut(s) 1191
BmgT120I GGNCC 7 cut(s) 66, 474, 505, 823, 829, 1194, 1356
BmiI GGNNCC 5 cut(s) 475, 476, 506, 710, 1231
BmrFI CCNGG 9 cut(s) 134, 259, 377, 458, 485, 616, 827, 968, 992
BmrI ACTGGG 1 cut(s) 480
BmsI GCATC 4 cut(s) 73, 232, 283, 991
BmtI GCTAGC 2 cut(s) 1178, 1272
BmuI ACTGGG 1 cut(s) 480
BpiI GAAGAC 1 cut(s) 873
BpmI CTGGAG 2 cut(s) 453, 727
Bpu10I CCTNAGC 2 cut(s) 753, 1163
BpuEI CTTGAG 2 cut(s) 96, 553
BpuMI CCSGG 1 cut(s) 259
BsaBI GATNNNNATC 1 cut(s) 1302
BsaI GGTCTC 1 cut(s) 626
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bsc4I CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 737
Bse118I RCCGGY 1 cut(s) 1388
Bse1I ACTGG 1 cut(s) 475
Bse3DI GCAATG 2 cut(s) 282, 610
Bse8I GATNNNNATC 1 cut(s) 1302
BseBI CCWGG 8 cut(s) 134, 377, 458, 485, 616, 827, 968, 992
BseGI GGATG 6 cut(s) 316, 493, 505, 541, 891, 1258
BseJI GATNNNNATC 1 cut(s) 1302
BseLI CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 737
BseMI GCAATG 2 cut(s) 282, 610
BseMII CTCAG 2 cut(s) 17, 767
BseNI ACTGG 1 cut(s) 475
BsePI GCGCGC 1 cut(s) 626
BseRI GAGGAG 1 cut(s) 221
BseXI GCAGC 3 cut(s) 795, 1012, 1222
Bsh1236I CGCG 6 cut(s) 592, 626, 628, 733, 999, 1241
Bsh1285I CGRYCG 1 cut(s) 405
BshFI GGCC 8 cut(s) 68, 338, 380, 483, 831, 1196, 1312, 1358
BshNI GGYRCC 1 cut(s) 1229
BsiEI CGRYCG 1 cut(s) 405
BsiHKAI GWGCWC 2 cut(s) 569, 966
BsiHKCI CYCGRG 1 cut(s) 1191
BsiSI CCGG 3 cut(s) 259, 1309, 1389
BsiWI CGTACG 1 cut(s) 1019
BslFI GGGAC 3 cut(s) 156, 487, 553
BslI CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 737
BsmAI GTCTC 5 cut(s) 383, 461, 626, 966, 1110
BsmBI CGTCTC 1 cut(s) 1110
BsmFI GGGAC 3 cut(s) 156, 487, 553
BsmI GAATGC 1 cut(s) 845
BsnI GGCC 8 cut(s) 68, 338, 380, 483, 831, 1196, 1312, 1358
Bso31I GGTCTC 1 cut(s) 626
BsoBI CYCGRG 1 cut(s) 1191
Bsp1286I GDGCHC 5 cut(s) 569, 590, 802, 943, 966
Bsp143I GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
Bsp19I CCATGG 1 cut(s) 478
Bsp68I TCGCGA 2 cut(s) 592, 999
BspACI CCGC 9 cut(s) 64, 425, 731, 1159, 1178, 1233, 1239, 1283, 1292
BspANI GGCC 8 cut(s) 68, 338, 380, 483, 831, 1196, 1312, 1358
BspCNI CTCAG 2 cut(s) 18, 766
BspFNI CGCG 6 cut(s) 592, 626, 628, 733, 999, 1241
BspHI TCATGA 1 cut(s) 876
BspLI GGNNCC 5 cut(s) 475, 476, 506, 710, 1231
BspMAI CTGCAG 2 cut(s) 690, 813
BspMI ACCTGC 3 cut(s) 538, 693, 1069
BspOI GCTAGC 2 cut(s) 1178, 1272
BspPI GGATC 6 cut(s) 122, 722, 881, 936, 1002, 1305
BspQI GCTCTTC 1 cut(s) 954
BspT107I GGYRCC 1 cut(s) 1229
BspTNI GGTCTC 1 cut(s) 626
BsrBI CCGCTC 1 cut(s) 1159
BsrDI GCAATG 2 cut(s) 282, 610
BsrFI RCCGGY 1 cut(s) 1388
BsrI ACTGG 1 cut(s) 475
BssAI RCCGGY 1 cut(s) 1388
BssHII GCGCGC 1 cut(s) 626
BssMI GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
BssSI CACGAG 1 cut(s) 713
BssT1I CCWWGG 5 cut(s) 69, 87, 478, 633, 736
Bst2BI CACGAG 1 cut(s) 713
Bst2UI CCWGG 8 cut(s) 134, 377, 458, 485, 616, 827, 968, 992
Bst4CI ACNGT 5 cut(s) 43, 184, 346, 695, 1109
Bst6I CTCTTC 2 cut(s) 213, 954
BstDEI CTNAG 4 cut(s) 26, 753, 1163, 1225
BstDSI CCRYGG 1 cut(s) 478
BstEII GGTNACC 2 cut(s) 367, 460
BstF5I GGATG 6 cut(s) 316, 493, 505, 541, 891, 1258
BstFNI CGCG 6 cut(s) 592, 626, 628, 733, 999, 1241
BstH2I RGCGCY 2 cut(s) 321, 663
BstHHI GCGC 6 cut(s) 320, 547, 628, 630, 662, 735
BstKTI GATC 9 cut(s) 130, 575, 730, 876, 902, 931, 997, 1057, 1300
BstMAI GTCTC 5 cut(s) 383, 461, 626, 966, 1110
BstMBI GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
BstMCI CGRYCG 1 cut(s) 405
BstMWI GCNNNNNNNGC 3 cut(s) 1180, 1238, 1289
BstNI CCWGG 8 cut(s) 134, 377, 458, 485, 616, 827, 968, 992
BstNSI RCATGY 1 cut(s) 525
BstPI GGTNACC 2 cut(s) 367, 460
BstSCI CCNGG 9 cut(s) 132, 257, 375, 456, 483, 614, 825, 966, 990
BstSFI CTRYAG 2 cut(s) 686, 809
BstUI CGCG 6 cut(s) 592, 626, 628, 733, 999, 1241
BstV1I GCAGC 3 cut(s) 795, 1012, 1222
BstV2I GAAGAC 1 cut(s) 873
BstX2I RGATCY 4 cut(s) 127, 572, 727, 1297
BstXI CCANNNNNNTGG 1 cut(s) 383
BstYI RGATCY 4 cut(s) 127, 572, 727, 1297
BsuRI GGCC 8 cut(s) 68, 338, 380, 483, 831, 1196, 1312, 1358
BtgI CCRYGG 1 cut(s) 478
BtgZI GCGATG 1 cut(s) 1014
BtsCI GGATG 6 cut(s) 316, 493, 505, 541, 891, 1258
BtsI GCAGTG 1 cut(s) 1383
BtsIMutI CAGTG 2 cut(s) 342, 1383
BtuMI TCGCGA 2 cut(s) 592, 999
BveI ACCTGC 3 cut(s) 538, 693, 1069
CciI TCATGA 1 cut(s) 876
CfoI GCGC 6 cut(s) 320, 547, 628, 630, 662, 735
Cfr10I RCCGGY 1 cut(s) 1388
Cfr13I GGNCC 7 cut(s) 66, 474, 505, 823, 829, 1194, 1356
CseI GACGC 3 cut(s) 130, 158, 281
Csp6I GTAC 4 cut(s) 108, 255, 1020, 1086
CviAII CATG 6 cut(s) 95, 442, 479, 522, 877, 1058
CviQI GTAC 4 cut(s) 108, 255, 1020, 1086
DdeI CTNAG 4 cut(s) 26, 753, 1163, 1225
DpnI GATC 9 cut(s) 129, 574, 729, 875, 901, 930, 996, 1056, 1299
DpnII GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
EaeI YGGCCR 2 cut(s) 481, 1310
Eam1104I CTCTTC 2 cut(s) 213, 954
EarI CTCTTC 2 cut(s) 213, 954
Eco130I CCWWGG 5 cut(s) 69, 87, 478, 633, 736
Eco24I GRGCYC 3 cut(s) 590, 802, 943
Eco31I GGTCTC 1 cut(s) 626
Eco47I GGWCC 3 cut(s) 474, 505, 823
Eco57I CTGAAG 2 cut(s) 435, 978
Eco88I CYCGRG 1 cut(s) 1191
Eco91I GGTNACC 2 cut(s) 367, 460
EcoO109I RGGNCCY 2 cut(s) 474, 1356
EcoO65I GGTNACC 2 cut(s) 367, 460
EcoRII CCWGG 8 cut(s) 132, 375, 456, 483, 614, 825, 966, 990
EcoT14I CCWWGG 5 cut(s) 69, 87, 478, 633, 736
EcoT38I GRGCYC 3 cut(s) 590, 802, 943
ErhI CCWWGG 5 cut(s) 69, 87, 478, 633, 736
Esp3I CGTCTC 1 cut(s) 1110
FaeI CATG 6 cut(s) 98, 445, 482, 525, 880, 1061
FaqI GGGAC 3 cut(s) 156, 487, 553
FatI CATG 6 cut(s) 94, 441, 478, 521, 876, 1057
FauI CCCGC 1 cut(s) 57
FauNDI CATATG 1 cut(s) 672
Fnu4HI GCNGC 6 cut(s) 809, 1026, 1160, 1233, 1236, 1239
FokI GGATG 6 cut(s) 323, 500, 512, 548, 898, 1265
FriOI GRGCYC 3 cut(s) 590, 802, 943
Fsp4HI GCNGC 6 cut(s) 809, 1026, 1160, 1233, 1236, 1239
FspBI CTAG 4 cut(s) 290, 737, 1175, 1269
FspI TGCGCA 1 cut(s) 546
GlaI GCGC 6 cut(s) 319, 546, 627, 629, 661, 734
GluI GCNGC 6 cut(s) 809, 1026, 1160, 1233, 1236, 1239
GsuI CTGGAG 2 cut(s) 453, 727
HaeII RGCGCY 2 cut(s) 321, 663
HaeIII GGCC 8 cut(s) 68, 338, 380, 483, 831, 1196, 1312, 1358
HapII CCGG 3 cut(s) 259, 1309, 1389
HgaI GACGC 3 cut(s) 130, 158, 281
HhaI GCGC 6 cut(s) 320, 547, 628, 630, 662, 735
Hin1II CATG 6 cut(s) 98, 445, 482, 525, 880, 1061
Hin6I GCGC 6 cut(s) 318, 545, 626, 628, 660, 733
HinP1I GCGC 6 cut(s) 318, 545, 626, 628, 660, 733
HincII GTYRAC 2 cut(s) 349, 1105
HindII GTYRAC 2 cut(s) 349, 1105
HinfI GANTC 2 cut(s) 137, 1369
HpaII CCGG 3 cut(s) 259, 1309, 1389
HphI GGTGA 2 cut(s) 503, 946
Hpy166II GTNNAC 2 cut(s) 349, 1105
Hpy188I TCNGA 7 cut(s) 27, 399, 509, 517, 918, 945, 1351
Hpy8I GTNNAC 2 cut(s) 349, 1105
Hpy99I CGWCG 1 cut(s) 124
HpyAV CCTTC 5 cut(s) 328, 876, 1067, 1162, 1354
HpyCH4III ACNGT 5 cut(s) 43, 184, 346, 695, 1109
HpyCH4IV ACGT 1 cut(s) 1119
HpyCH4V TGCA 5 cut(s) 268, 421, 670, 688, 811
HpyF10VI GCNNNNNNNGC 3 cut(s) 1180, 1238, 1289
HpyF3I CTNAG 4 cut(s) 26, 753, 1163, 1225
HpySE526I ACGT 1 cut(s) 1119
Hsp92II CATG 6 cut(s) 98, 445, 482, 525, 880, 1061
HspAI GCGC 6 cut(s) 318, 545, 626, 628, 660, 733
KflI GGGWCCC 1 cut(s) 474
Kzo9I GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
LguI GCTCTTC 1 cut(s) 954
Lsp1109I GCAGC 3 cut(s) 795, 1012, 1222
LweI GCATC 4 cut(s) 73, 232, 283, 991
MaeI CTAG 4 cut(s) 290, 737, 1175, 1269
MaeII ACGT 1 cut(s) 1119
MaeIII GTNAC 2 cut(s) 367, 460
MalI GATC 9 cut(s) 129, 574, 729, 875, 901, 930, 996, 1056, 1299
MbiI CCGCTC 1 cut(s) 1159
MboI GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
MboII GAAGA 5 cut(s) 86, 230, 737, 878, 971
MfeI CAATTG 1 cut(s) 861
MflI RGATCY 4 cut(s) 127, 572, 727, 1297
MhlI GDGCHC 5 cut(s) 569, 590, 802, 943, 966
MlsI TGGCCA 1 cut(s) 483
MluCI AATT 3 cut(s) 648, 861, 1067
MluNI TGGCCA 1 cut(s) 483
MlyI GAGTC 1 cut(s) 146
MmeI TCCRAC 4 cut(s) 261, 801, 873, 990
Mox20I TGGCCA 1 cut(s) 483
MscI TGGCCA 1 cut(s) 483
MslI CAYNNNNRTG 1 cut(s) 1251
Msp20I TGGCCA 1 cut(s) 483
MspA1I CMGCKG 2 cut(s) 64, 1235
MspI CCGG 3 cut(s) 259, 1309, 1389
MspR9I CCNGG 9 cut(s) 134, 259, 377, 458, 485, 616, 827, 968, 992
MunI CAATTG 1 cut(s) 861
Mva1269I GAATGC 1 cut(s) 845
MvaI CCWGG 8 cut(s) 134, 377, 458, 485, 616, 827, 968, 992
MvnI CGCG 6 cut(s) 592, 626, 628, 733, 999, 1241
MwoI GCNNNNNNNGC 3 cut(s) 1180, 1238, 1289
NciI CCSGG 1 cut(s) 259
NcoI CCATGG 1 cut(s) 478
NdeI CATATG 1 cut(s) 672
NdeII GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
NheI GCTAGC 2 cut(s) 1174, 1268
NlaIII CATG 6 cut(s) 98, 445, 482, 525, 880, 1061
NlaIV GGNNCC 5 cut(s) 475, 476, 506, 710, 1231
NmeAIII GCCGAG 3 cut(s) 1030, 1234, 1298
NruI TCGCGA 2 cut(s) 592, 999
NsbI TGCGCA 1 cut(s) 546
NspI RCATGY 1 cut(s) 525
PagI TCATGA 1 cut(s) 876
PauI GCGCGC 1 cut(s) 626
PciSI GCTCTTC 1 cut(s) 954
PcsI WCGNNNNNNNCGW 1 cut(s) 720
PctI GAATGC 1 cut(s) 845
PfeI GAWTC 1 cut(s) 1369
Pfl23II CGTACG 1 cut(s) 1019
PfoI TCCNGGA 1 cut(s) 990
PkrI GCNGC 6 cut(s) 810, 1027, 1161, 1234, 1237, 1240
PleI GAGTC 1 cut(s) 145
PpsI GAGTC 1 cut(s) 145
PpuMI RGGWCCY 1 cut(s) 474
Psp5II RGGWCCY 1 cut(s) 474
Psp6I CCWGG 8 cut(s) 132, 375, 456, 483, 614, 825, 966, 990
PspEI GGTNACC 2 cut(s) 367, 460
PspGI CCWGG 8 cut(s) 132, 375, 456, 483, 614, 825, 966, 990
PspLI CGTACG 1 cut(s) 1019
PspN4I GGNNCC 5 cut(s) 475, 476, 506, 710, 1231
PspPI GGNCC 7 cut(s) 66, 474, 505, 823, 829, 1194, 1356
PspPPI RGGWCCY 1 cut(s) 474
PstI CTGCAG 2 cut(s) 690, 813
PsuI RGATCY 4 cut(s) 127, 572, 727, 1297
PteI GCGCGC 1 cut(s) 626
RruI TCGCGA 2 cut(s) 592, 999
RsaI GTAC 4 cut(s) 109, 256, 1021, 1087
RsaNI GTAC 4 cut(s) 108, 255, 1020, 1086
RseI CAYNNNNRTG 1 cut(s) 1251
SapI GCTCTTC 1 cut(s) 954
SatI GCNGC 6 cut(s) 809, 1026, 1160, 1233, 1236, 1239
Sau3AI GATC 9 cut(s) 127, 572, 727, 873, 899, 928, 994, 1054, 1297
Sau96I GGNCC 7 cut(s) 66, 474, 505, 823, 829, 1194, 1356
SchI GAGTC 1 cut(s) 146
ScrFI CCNGG 9 cut(s) 134, 259, 377, 458, 485, 616, 827, 968, 992
SduI GDGCHC 5 cut(s) 569, 590, 802, 943, 966
SfaNI GCATC 4 cut(s) 73, 232, 283, 991
SfcI CTRYAG 2 cut(s) 686, 809
SinI GGWCC 3 cut(s) 474, 505, 823
SmiMI CAYNNNNRTG 1 cut(s) 1251
SmlI CTYRAG 2 cut(s) 111, 568
SmoI CTYRAG 2 cut(s) 111, 568
Sse9I AATT 3 cut(s) 648, 861, 1067
SsiI CCGC 9 cut(s) 64, 425, 731, 1159, 1178, 1233, 1239, 1283, 1292
SspMI CTAG 4 cut(s) 290, 737, 1175, 1269
StyD4I CCNGG 9 cut(s) 132, 257, 375, 456, 483, 614, 825, 966, 990
StyI CCWWGG 5 cut(s) 69, 87, 478, 633, 736
TaaI ACNGT 5 cut(s) 43, 184, 346, 695, 1109
TaiI ACGT 1 cut(s) 1122
TaqI TCGA 4 cut(s) 81, 723, 786, 1372
TaqII GACCGA 1 cut(s) 419
TasI AATT 3 cut(s) 648, 861, 1067
TauI GCSGC 3 cut(s) 1162, 1235, 1241
TfiI GAWTC 1 cut(s) 1369
TscAI CASTG 2 cut(s) 349, 1390
TseI GCWGC 3 cut(s) 808, 1025, 1235
TspDTI ATGAA 1 cut(s) 1207
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 2 cut(s) 349, 1390
VpaK11BI GGWCC 3 cut(s) 474, 505, 823
XceI RCATGY 1 cut(s) 525
XcmI CCANNNNNNNNNTGG 3 cut(s) 187, 485, 670
XmaJI CCTAGG 1 cut(s) 736
XspI CTAG 4 cut(s) 290, 737, 1175, 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.