Rmu_sc0000247.1_g000030

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000247.1
OG0000075
Physical Location & Seq
Forward (+)
155578 .. 157732
2155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000247.1_g000030.1.cds

Sequence Viewer

Length: 1521 bp
atgctgctggccgatgacttgtacgagaggtttcctgatagggttttggagtatcttaatagtcgagcagttgatgttgaggtacaagtgggcgttgatggggtcgcaatacaaggccagcagaatcaggagggcgaggggaggtcacattctcaagacacaactggtgctcacgatatcaagcagggtgctcggggagttgttgggaagcaagcgccatctttggaagtagagatctccgtggaggaattatttgaggaagttgagcaatgtcagagcaataccaatgctggggttcgcctagtagaggacttggtcttgaaacagctggagggcgtttttggcaccgatactgagggtctagggtctcgagaacttattgttgttgatagccgggaggctgaggacatccagatggctgaggtggtggcttctattcagccaggtgagggagatggggcctggggtactagtacctgtgcgcgtaatgactatgtcgggctaaggaagaggactgtttcacagcttcgtctcgagagtcctcccgtgggtgtcaatattaaccctcgcggggggaagagatctcaggttgatggggtggcacgctcgaggtccactagtgagggttctcggcactcgcatgatgagattagtggaggtctcgctcatacacttggagagatcgggatcacagatggtgctattttgcacatgatggccgacctgcgcaattatcgttatgatcggggccgtgttaactcctatgatcctcgtctcaggtatcgggatgcccaagagaggttgatgagggctgtgaatatgaattatcaagcgtcggctgagcttctcgagcagtttgatctagagatcgctcagctctggggcgagctagaggctgagaggcggagggctcaagagattcagggtttgttggatcgtagtaaggttgaccatgaagaaatgaggcaggcgattaatgatggcattgcgaggaggatggagctagagcgatcattggcgctcagtgttttgcaaagggaggttgatcgtttgagggttgtcgaacaccaggctggcgagaaggatgtcgagctggagcagttaaggaaggaagtggttgaagagcgttctcggtctaatacctttgctgaggattgtatttgtgtatgtgcggaagcgactacacatatggacaaggtcaaaaaggccaaaagggatggtgcgttccgcgctgtcgatcactaccttctatcatccaacttcaaggagaaagtgaacaaagcattctcggatggagccttgcattcgattcacgacagtatcactggaggatggattgaccaggataagatgttgcttcggaaagtagtgcaagccagggcgggggttaagaagctggggacgatcatggtgaagcaccggtggtggatatcgaggccacaccagaaggctatcgaacgaaccgcactctttcatatacgtcaggagtccattgatgagaaggggctacagaaagcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

506

Amino Acids

56.85

Weight (kDa)

5.65

Isoelectric Point (pI)

43.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 728
Acc36I ACCTGC 1 cut(s) 732
AccB1I GGYRCC 1 cut(s) 344
AccII CGCG 3 cut(s) 484, 570, 1230
AciI CCGC 6 cut(s) 570, 904, 1172, 1228, 1382, 1464
AclWI GGATC 3 cut(s) 695, 761, 942
AcoI YGGCCR 2 cut(s) 9, 717
AfaI GTAC 4 cut(s) 23, 84, 469, 475
AfiI CCNNNNNNNGG 8 cut(s) 291, 307, 449, 548, 571, 572, 798, 1383
AgeI ACCGGT 1 cut(s) 1419
AgsI TTSAA 3 cut(s) 322, 1121, 1264
AhlI ACTAGT 2 cut(s) 470, 617
AjnI CCWGG 5 cut(s) 442, 461, 1068, 1341, 1376
AloI GAACNNNNNNTCC 2 cut(s) 1208, 1240
AluBI AGCT 9 cut(s) 328, 526, 844, 877, 889, 1003, 1093, 1396, 1517
AluI AGCT 9 cut(s) 328, 526, 844, 877, 889, 1003, 1093, 1396, 1517
Alw21I GWGCWC 2 cut(s) 172, 193
Alw26I GTCTC 4 cut(s) 372, 536, 665, 779
AlwI GGATC 3 cut(s) 695, 761, 942
Ama87I CYCGRG 5 cut(s) 192, 369, 533, 607, 848
AoxI GGCC 7 cut(s) 9, 115, 459, 717, 748, 1206, 1436
ApeKI GCWGC 1 cut(s) 4
AseI ATTAAT 1 cut(s) 975
AsiGI ACCGGT 1 cut(s) 1419
AspLEI GCGC 5 cut(s) 217, 484, 729, 1021, 1232
AspS9I GGNCC 3 cut(s) 459, 612, 748
AsuC2I CCSGG 1 cut(s) 395
AsuHPI GGTGA 2 cut(s) 458, 1423
AvaI CYCGRG 5 cut(s) 192, 369, 533, 607, 848
AvaII GGWCC 1 cut(s) 612
BaeI ACNNNNGTAYC 2 cut(s) 1303, 1336
BanI GGYRCC 1 cut(s) 344
BanII GRGCYC 1 cut(s) 913
Bbv12I GWGCWC 2 cut(s) 172, 193
BbvCI CCTCAGC 3 cut(s) 402, 420, 1149
BceAI ACGGC 1 cut(s) 735
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 5 cut(s) 444, 463, 1070, 1343, 1378
BcnI CCSGG 1 cut(s) 395
BcoDI GTCTC 4 cut(s) 372, 536, 665, 779
BcuI ACTAGT 2 cut(s) 470, 617
BfaI CTAG 7 cut(s) 302, 362, 471, 618, 863, 890, 1004
BfmI CTRYAG 1 cut(s) 1508
BfoI RGCGCY 2 cut(s) 218, 1022
BfuAI ACCTGC 1 cut(s) 732
BglII AGATCT 2 cut(s) 234, 581
BisI GCNGC 1 cut(s) 5
BlpI GCTNAGC 2 cut(s) 840, 873
BlsI GCNGC 1 cut(s) 6
Bme1390I CCNGG 6 cut(s) 395, 444, 463, 1070, 1343, 1378
Bme18I GGWCC 1 cut(s) 612
BmeT110I CYCGRG 5 cut(s) 192, 369, 533, 607, 848
BmgT120I GGNCC 3 cut(s) 459, 612, 748
BmiI GGNNCC 4 cut(s) 346, 460, 749, 1297
BmrFI CCNGG 6 cut(s) 395, 444, 463, 1070, 1343, 1378
BmsI GCATC 1 cut(s) 778
BpmI CTGGAG 3 cut(s) 350, 1115, 1347
Bpu10I CCTNAGC 4 cut(s) 402, 420, 503, 1149
Bpu1102I GCTNAGC 2 cut(s) 840, 873
BpuEI CTTGAG 2 cut(s) 138, 897
BpuMI CCSGG 1 cut(s) 395
BsaBI GATNNNNATC 1 cut(s) 686
BsaI GGTCTC 2 cut(s) 372, 665
BsaJI CCNNGG 4 cut(s) 240, 462, 546, 1377
BsaWI WCCGGW 1 cut(s) 1419
Bsc4I CCNNNNNNNGG 8 cut(s) 291, 307, 449, 548, 571, 572, 798, 1383
Bse118I RCCGGY 1 cut(s) 1419
Bse1I ACTGG 2 cut(s) 169, 1330
Bse3DI GCAATG 2 cut(s) 275, 984
Bse8I GATNNNNATC 1 cut(s) 686
BseBI CCWGG 5 cut(s) 444, 463, 1070, 1343, 1378
BseDI CCNNGG 4 cut(s) 240, 462, 546, 1377
BseGI GGATG 8 cut(s) 408, 793, 1002, 1090, 1222, 1253, 1297, 1337
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 8 cut(s) 291, 307, 449, 548, 571, 572, 798, 1383
BseMI GCAATG 2 cut(s) 275, 984
BseNI ACTGG 2 cut(s) 169, 1330
BseRI GAGGAG 1 cut(s) 1006
BseYI CCCAGC 2 cut(s) 290, 1396
Bsh1236I CGCG 3 cut(s) 484, 570, 1230
BshFI GGCC 7 cut(s) 11, 117, 461, 719, 750, 1208, 1438
BshNI GGYRCC 1 cut(s) 344
BshTI ACCGGT 1 cut(s) 1419
BsiHKAI GWGCWC 2 cut(s) 172, 193
BsiHKCI CYCGRG 5 cut(s) 192, 369, 533, 607, 848
BsiSI CCGG 2 cut(s) 394, 1420
BslFI GGGAC 1 cut(s) 1414
BslI CCNNNNNNNGG 8 cut(s) 291, 307, 449, 548, 571, 572, 798, 1383
BsmAI GTCTC 4 cut(s) 372, 536, 665, 779
BsmBI CGTCTC 2 cut(s) 536, 779
BsmFI GGGAC 1 cut(s) 1414
BsmI GAATGC 2 cut(s) 1283, 1303
BsnI GGCC 7 cut(s) 11, 117, 461, 719, 750, 1208, 1438
Bso31I GGTCTC 2 cut(s) 372, 665
BsoBI CYCGRG 5 cut(s) 192, 369, 533, 607, 848
Bsp1286I GDGCHC 3 cut(s) 172, 193, 913
Bsp1720I GCTNAGC 2 cut(s) 840, 873
BspACI CCGC 6 cut(s) 570, 904, 1172, 1228, 1382, 1464
BspANI GGCC 7 cut(s) 11, 117, 461, 719, 750, 1208, 1438
BspFNI CGCG 3 cut(s) 484, 570, 1230
BspLI GGNNCC 4 cut(s) 346, 460, 749, 1297
BspMI ACCTGC 1 cut(s) 732
BspPI GGATC 3 cut(s) 695, 761, 942
BspQI GCTCTTC 1 cut(s) 1116
BspT107I GGYRCC 1 cut(s) 344
BspTNI GGTCTC 2 cut(s) 372, 665
BsrDI GCAATG 2 cut(s) 275, 984
BsrFI RCCGGY 1 cut(s) 1419
BsrI ACTGG 2 cut(s) 169, 1330
BssAI RCCGGY 1 cut(s) 1419
BssECI CCNNGG 4 cut(s) 240, 462, 546, 1377
Bst2UI CCWGG 5 cut(s) 444, 463, 1070, 1343, 1378
Bst4CI ACNGT 2 cut(s) 517, 1319
Bst6I CTCTTC 3 cut(s) 503, 572, 1116
BstC8I GCNNGC 8 cut(s) 9, 119, 213, 604, 887, 969, 1075, 1374
BstDSI CCRYGG 2 cut(s) 240, 546
BstENI CCTNNNNNAGG 1 cut(s) 305
BstF5I GGATG 8 cut(s) 408, 793, 1002, 1090, 1222, 1253, 1297, 1337
BstFNI CGCG 3 cut(s) 484, 570, 1230
BstH2I RGCGCY 2 cut(s) 218, 1022
BstHHI GCGC 5 cut(s) 217, 484, 729, 1021, 1232
BstMAI GTCTC 4 cut(s) 372, 536, 665, 779
BstMWI GCNNNNNNNGC 3 cut(s) 342, 850, 1229
BstNI CCWGG 5 cut(s) 444, 463, 1070, 1343, 1378
BstSCI CCNGG 6 cut(s) 393, 442, 461, 1068, 1341, 1376
BstSFI CTRYAG 1 cut(s) 1508
BstUI CGCG 3 cut(s) 484, 570, 1230
BstX2I RGATCY 2 cut(s) 234, 581
BstYI RGATCY 2 cut(s) 234, 581
BsuRI GGCC 7 cut(s) 11, 117, 461, 719, 750, 1208, 1438
BtgI CCRYGG 2 cut(s) 240, 546
BtsCI GGATG 8 cut(s) 408, 793, 1002, 1090, 1222, 1253, 1297, 1337
BtsIMutI CAGTG 2 cut(s) 1030, 1323
BveI ACCTGC 1 cut(s) 732
Cac8I GCNNGC 8 cut(s) 9, 119, 213, 604, 887, 969, 1075, 1374
CfoI GCGC 5 cut(s) 217, 484, 729, 1021, 1232
Cfr10I RCCGGY 1 cut(s) 1419
Cfr13I GGNCC 3 cut(s) 459, 612, 748
CseI GACGC 1 cut(s) 822
Csp6I GTAC 4 cut(s) 22, 83, 468, 474
CspAI ACCGGT 1 cut(s) 1419
CviAII CATG 4 cut(s) 641, 712, 953, 1408
CviQI GTAC 4 cut(s) 22, 83, 468, 474
EaeI YGGCCR 2 cut(s) 9, 717
Eam1104I CTCTTC 3 cut(s) 503, 572, 1116
EarI CTCTTC 3 cut(s) 503, 572, 1116
EciI GGCGGA 1 cut(s) 919
Eco24I GRGCYC 1 cut(s) 913
Eco31I GGTCTC 2 cut(s) 372, 665
Eco32I GATATC 2 cut(s) 178, 1431
Eco47I GGWCC 1 cut(s) 612
Eco88I CYCGRG 5 cut(s) 192, 369, 533, 607, 848
EcoNI CCTNNNNNAGG 1 cut(s) 305
EcoO109I RGGNCCY 1 cut(s) 459
EcoRII CCWGG 5 cut(s) 442, 461, 1068, 1341, 1376
EcoRV GATATC 2 cut(s) 178, 1431
EcoT38I GRGCYC 1 cut(s) 913
Esp3I CGTCTC 2 cut(s) 536, 779
FaeI CATG 4 cut(s) 644, 715, 956, 1411
FaqI GGGAC 1 cut(s) 1414
FatI CATG 4 cut(s) 640, 711, 952, 1407
FauI CCCGC 2 cut(s) 563, 1375
FauNDI CATATG 1 cut(s) 1188
Fnu4HI GCNGC 1 cut(s) 5
FokI GGATG 8 cut(s) 395, 800, 1009, 1097, 1229, 1240, 1304, 1344
FriOI GRGCYC 1 cut(s) 913
Fsp4HI GCNGC 1 cut(s) 5
FspBI CTAG 7 cut(s) 302, 362, 471, 618, 863, 890, 1004
FspI TGCGCA 1 cut(s) 728
GlaI GCGC 5 cut(s) 216, 483, 728, 1020, 1231
GluI GCNGC 1 cut(s) 5
GsaI CCCAGC 2 cut(s) 294, 1400
GsuI CTGGAG 3 cut(s) 350, 1115, 1347
HaeII RGCGCY 2 cut(s) 218, 1022
HaeIII GGCC 7 cut(s) 11, 117, 461, 719, 750, 1208, 1438
HapII CCGG 2 cut(s) 394, 1420
HgaI GACGC 1 cut(s) 822
HhaI GCGC 5 cut(s) 217, 484, 729, 1021, 1232
Hin1II CATG 4 cut(s) 644, 715, 956, 1411
Hin6I GCGC 5 cut(s) 215, 482, 727, 1019, 1230
HinP1I GCGC 5 cut(s) 215, 482, 727, 1019, 1230
HincII GTYRAC 2 cut(s) 757, 949
HindII GTYRAC 2 cut(s) 757, 949
HindIII AAGCTT 1 cut(s) 1515
HinfI GANTC 5 cut(s) 124, 538, 919, 1309, 1487
HpaI GTTAAC 1 cut(s) 757
HpaII CCGG 2 cut(s) 394, 1420
HphI GGTGA 2 cut(s) 458, 1423
Hpy166II GTNNAC 4 cut(s) 615, 757, 949, 1276
Hpy188I TCNGA 3 cut(s) 276, 1291, 1362
Hpy8I GTNNAC 4 cut(s) 615, 757, 949, 1276
Hpy99I CGWCG 1 cut(s) 838
HpyAV CCTTC 5 cut(s) 1075, 1102, 1256, 1441, 1495
HpyCH4III ACNGT 2 cut(s) 517, 1319
HpyCH4IV ACGT 1 cut(s) 1480
HpyCH4V TGCA 4 cut(s) 709, 1033, 1303, 1372
HpyF10VI GCNNNNNNNGC 3 cut(s) 342, 850, 1229
HpySE526I ACGT 1 cut(s) 1480
Hsp92II CATG 4 cut(s) 644, 715, 956, 1411
HspAI GCGC 5 cut(s) 215, 482, 727, 1019, 1230
KspAI GTTAAC 1 cut(s) 757
LguI GCTCTTC 1 cut(s) 1116
LmnI GCTCC 3 cut(s) 1000, 1096, 1295
LweI GCATC 1 cut(s) 778
MaeI CTAG 7 cut(s) 302, 362, 471, 618, 863, 890, 1004
MaeII ACGT 1 cut(s) 1480
MaeIII GTNAC 1 cut(s) 144
MboII GAAGA 4 cut(s) 520, 589, 968, 1133
MflI RGATCY 2 cut(s) 234, 581
MhlI GDGCHC 3 cut(s) 172, 193, 913
MluCI AATT 3 cut(s) 248, 730, 823
MlyI GAGTC 2 cut(s) 547, 1496
MmeI TCCRAC 2 cut(s) 912, 1281
MseI TTAA 6 cut(s) 57, 561, 756, 975, 1103, 1389
MslI CAYNNNNRTG 2 cut(s) 413, 639
MspA1I CMGCKG 1 cut(s) 328
MspI CCGG 2 cut(s) 394, 1420
MspR9I CCNGG 6 cut(s) 395, 444, 463, 1070, 1343, 1378
Mva1269I GAATGC 2 cut(s) 1283, 1303
MvaI CCWGG 5 cut(s) 444, 463, 1070, 1343, 1378
MvnI CGCG 3 cut(s) 484, 570, 1230
MwoI GCNNNNNNNGC 3 cut(s) 342, 850, 1229
NciI CCSGG 1 cut(s) 395
NdeI CATATG 1 cut(s) 1188
NlaIII CATG 4 cut(s) 644, 715, 956, 1411
NlaIV GGNNCC 4 cut(s) 346, 460, 749, 1297
NmeAIII GCCGAG 1 cut(s) 610
NmuCI GTSAC 1 cut(s) 144
NsbI TGCGCA 1 cut(s) 728
PaeR7I CTCGAG 4 cut(s) 369, 533, 607, 848
PciSI GCTCTTC 1 cut(s) 1116
PctI GAATGC 2 cut(s) 1283, 1303
PfeI GAWTC 3 cut(s) 124, 919, 1309
PflFI GACNNNGTC 3 cut(s) 314, 494, 1196
PinAI ACCGGT 1 cut(s) 1419
PkrI GCNGC 1 cut(s) 6
PleI GAGTC 2 cut(s) 546, 1495
PpsI GAGTC 2 cut(s) 546, 1495
PshBI ATTAAT 1 cut(s) 975
Psp6I CCWGG 5 cut(s) 442, 461, 1068, 1341, 1376
PspFI CCCAGC 2 cut(s) 290, 1396
PspGI CCWGG 5 cut(s) 442, 461, 1068, 1341, 1376
PspN4I GGNNCC 4 cut(s) 346, 460, 749, 1297
PspPI GGNCC 3 cut(s) 459, 612, 748
PspXI VCTCGAGB 1 cut(s) 607
PsuI RGATCY 2 cut(s) 234, 581
PsyI GACNNNGTC 3 cut(s) 314, 494, 1196
PvuII CAGCTG 1 cut(s) 328
RsaI GTAC 4 cut(s) 23, 84, 469, 475
RsaNI GTAC 4 cut(s) 22, 83, 468, 474
RseI CAYNNNNRTG 2 cut(s) 413, 639
SapI GCTCTTC 1 cut(s) 1116
SaqAI TTAA 6 cut(s) 57, 561, 756, 975, 1103, 1389
SatI GCNGC 1 cut(s) 5
Sau96I GGNCC 3 cut(s) 459, 612, 748
SchI GAGTC 2 cut(s) 547, 1496
ScrFI CCNGG 6 cut(s) 395, 444, 463, 1070, 1343, 1378
SduI GDGCHC 3 cut(s) 172, 193, 913
SfaNI GCATC 1 cut(s) 778
SfcI CTRYAG 1 cut(s) 1508
Sfr274I CTCGAG 4 cut(s) 369, 533, 607, 848
SgrAI CRCCGGYG 1 cut(s) 1419
SinI GGWCC 1 cut(s) 612
SlaI CTCGAG 4 cut(s) 369, 533, 607, 848
SmiMI CAYNNNNRTG 2 cut(s) 413, 639
SmlI CTYRAG 6 cut(s) 153, 369, 533, 607, 848, 912
SmoI CTYRAG 6 cut(s) 153, 369, 533, 607, 848, 912
SpeI ACTAGT 2 cut(s) 470, 617
Sse9I AATT 3 cut(s) 248, 730, 823
SsiI CCGC 6 cut(s) 570, 904, 1172, 1228, 1382, 1464
SspI AATATT 1 cut(s) 559
SspMI CTAG 7 cut(s) 302, 362, 471, 618, 863, 890, 1004
StyD4I CCNGG 6 cut(s) 393, 442, 461, 1068, 1341, 1376
TaaI ACNGT 2 cut(s) 517, 1319
TaiI ACGT 1 cut(s) 1483
TaqII GACCGA 1 cut(s) 1122
TasI AATT 3 cut(s) 248, 730, 823
TfiI GAWTC 3 cut(s) 124, 919, 1309
Tru1I TTAA 6 cut(s) 57, 561, 756, 975, 1103, 1389
Tru9I TTAA 6 cut(s) 57, 561, 756, 975, 1103, 1389
TscAI CASTG 2 cut(s) 1030, 1330
TseFI GTSAC 1 cut(s) 144
TseI GCWGC 1 cut(s) 4
Tsp45I GTSAC 1 cut(s) 144
TspDTI ATGAA 3 cut(s) 836, 969, 1463
TspGWI ACGGA 1 cut(s) 229
TspRI CASTG 2 cut(s) 1030, 1330
Tth111I GACNNNGTC 3 cut(s) 314, 494, 1196
VpaK11BI GGWCC 1 cut(s) 612
VspI ATTAAT 1 cut(s) 975
XagI CCTNNNNNAGG 1 cut(s) 305
XbaI TCTAGA 1 cut(s) 862
XhoI CTCGAG 4 cut(s) 369, 533, 607, 848
XspI CTAG 7 cut(s) 302, 362, 471, 618, 863, 890, 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.