Rmu_co8498095.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8498095.1
OG0000075
Physical Location & Seq
Reverse (-)
2 .. 2805
2804 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8498095.1_g000001.1.cds

Sequence Viewer

Length: 2057 bp
atggtggggaagagggtgcttctcgcagtcgcagtggaggtggtccccgcgagagcgccgcgggtggttcccggggttcgtctcgtggagttttgggtagggttgagcgaatggtggtggctgatgtgcctgaagcagagggtgttggagtatctaggattcctcgttcgcctcgggggcgatacacctattgatcaacctggtctgaatatgacggaggagcagattgccgaggtgcgggttgagcttcccgatactggaggagttgcagtatctgctgtcttgcctgaacataacggtggggcagctatcgcccaatgcgttgaggcagatgatgggagtgttgctgttatggaagctttgcaagttgttatgtcccagtatcgggcgcgcggccgcgccgttattgaggatttgccgtcaaacatctatgcgcgctggtggggcaggccttgcttggtaggaggccggtggcagaatctggatatggtacatcgggctccgacccgtttccaacccatcttgaggcaagaggttgacatgaccacgctagagcggaagtgtgtggcaagggtgatgggtgcatttcccaagggggcgagagggttctatcgtctgtgtagactcccgatattcgagaggtttgagctggggaggtttctgggtgagggttctctgttaggtttgtgtttggttatgggttgtgttgtggagatgctaacgttgtatgtttgttttgaagcagatatgtcgaatgaggcctctagcaaaaatgacgccccatatgcagatgtcaattctgataccattattcaggggctgttgcgagaatcgcagatggcgaggctagtggacgttgacttgccggatacggtgtgtgtgactgatcatatggtgagtatgttgctgcctgatgagatgtatctgagttttctctatgccgtgctggagtatctcaatcagcaggccgaggaagaaactggtgccgaggggagtgaggttaggggaggggaggatcttggtgacgcggctcgggcctcggagcccatggtggaggtggagatctccgtcaaggatctgctggaagagctggaaatcgttgatgagattcacaatcctgtctcgcgggaggttattacagtggatagtggagaggcagaggtgaccagtcaagccgttggtgagataggtctgacggctgaggcccctaaggtgcaacctgggtctttggaaggcgtggttggggttgcccaagttaccgaggtggggacccatggccaggatggtgagggggatgggatccgagtgtcagatacgtgggctagtaaggatgggattggggcgaagaaaaggaccacctcgcagctacgcctatggattcccccagctggggttagtatcaatactcgcggtagcaagagatctcgggtggataacgtcttgcggttaaggtccactagtgggggttggcgaggttttcgcaatgagaattgtcatcgcgaccacagcaacgtgagtgctgaagatccagtcctaaggtatcgggaggctcaggagaggctaatgagggcggtgaacatgaattaccatgcctcgggcgagttggtggcttattttgatcgggagatagcccgactgcagggggagctgaatgcggagagggagtgggcccatgggctacaaggtgtgttagaccaatgtcaggtggaatgtgaggatatgaggcgagcaatcgatgatgggatcgcgagaagaatggagttggaggagtcaaacctagatcttaccgggaagttgcaacgggcagaggatggtataagattggtagatcaggtcagggcccgggtgagcgaggccgaagagtgtctgcaggacttggaaaggcaggtccgagaacgcgatgttgagttggagcttcaagcggctaccttggagagtttggctttgtatcccgatagtgtggtggatttggaggggcaggtttgtaatctgcaaagggaggttgaccgtctacgggatgttgagcttgaagcaggcgagtgggagacagagatgga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

685

Amino Acids

76.21

Weight (kDa)

4.67

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1876, 1969
AccB1I GGYRCC 1 cut(s) 983
AccBSI CCGCTC 1 cut(s) 556
AccI GTMKAC 2 cut(s) 622, 2011
AclI AACGTT 1 cut(s) 722
AclWI GGATC 6 cut(s) 1023, 1083, 1294, 1307, 1520, 1751
AcoI YGGCCR 2 cut(s) 394, 1276
AcuI CTGAAG 2 cut(s) 152, 1542
AcyI GRCGYC 1 cut(s) 777
AfaI GTAC 1 cut(s) 492
AgsI TTSAA 3 cut(s) 740, 1919, 2030
AhlI ACTAGT 1 cut(s) 1457
AjnI CCWGG 3 cut(s) 199, 1219, 1278
AjuI GAANNNNNNNTTGG 2 cut(s) 1224, 1256
AloI GAACNNNNNNTCC 2 cut(s) 150, 182
Alw26I GTCTC 3 cut(s) 86, 1126, 2039
AlwI GGATC 6 cut(s) 1023, 1083, 1294, 1307, 1520, 1751
AlwNI CAGNNNCTG 3 cut(s) 275, 481, 820
Ama87I CYCGRG 6 cut(s) 71, 173, 1032, 1425, 1594, 1842
ApaI GGGCCC 2 cut(s) 1672, 1843
ApeKI GCWGC 3 cut(s) 305, 907, 1363
AspLEI GCGC 6 cut(s) 58, 391, 393, 401, 436, 438
AsuC2I CCSGG 5 cut(s) 72, 73, 1789, 1843, 1844
AsuHPI GGTGA 9 cut(s) 586, 677, 907, 1034, 1174, 1193, 1298, 1585, 1858
AvaI CYCGRG 6 cut(s) 71, 173, 1032, 1425, 1594, 1842
AvaII GGWCC 5 cut(s) 43, 1269, 1353, 1452, 1888
AxyI CCTNAGG 2 cut(s) 1209, 1535
BaeGI GKGCMC 2 cut(s) 1672, 1843
BalI TGGCCA 1 cut(s) 1278
BamHI GGATCC 1 cut(s) 1299
BanI GGYRCC 1 cut(s) 983
BanII GRGCYC 4 cut(s) 502, 1047, 1672, 1843
BauI CACGAG 1 cut(s) 83
BbvCI CCTCAGC 1 cut(s) 1200
BbvI GCAGC 3 cut(s) 317, 894, 1375
BceAI ACGGC 5 cut(s) 386, 403, 926, 1160, 1212
BcgI CGANNNNNNTGC 2 cut(s) 732, 766
BciT130I CCWGG 3 cut(s) 201, 1221, 1280
BciVI GTATCC 2 cut(s) 862, 1959
BclI TGATCA 2 cut(s) 193, 886
BcnI CCSGG 5 cut(s) 72, 73, 1789, 1843, 1844
BcoDI GTCTC 3 cut(s) 86, 1126, 2039
BcuI ACTAGT 1 cut(s) 1457
BfaI CTAG 7 cut(s) 155, 551, 765, 848, 1323, 1458, 1778
BfmI CTRYAG 2 cut(s) 1637, 1868
BfoI RGCGCY 1 cut(s) 59
BfuAI ACCTGC 2 cut(s) 1876, 1969
BfuI GTATCC 2 cut(s) 862, 1959
BglI GCCNNNNNGGC 1 cut(s) 177
BglII AGATCT 3 cut(s) 1062, 1421, 1780
BisI GCNGC 8 cut(s) 59, 306, 394, 397, 908, 1029, 1364, 1923
BlsI GCNGC 8 cut(s) 60, 307, 395, 398, 909, 1030, 1365, 1924
Bme1390I CCNGG 8 cut(s) 72, 73, 201, 1221, 1280, 1789, 1843, 1844
Bme18I GGWCC 5 cut(s) 43, 1269, 1353, 1452, 1888
BmeT110I CYCGRG 6 cut(s) 71, 173, 1032, 1425, 1594, 1842
BmrFI CCNGG 8 cut(s) 72, 73, 201, 1221, 1280, 1789, 1843, 1844
BmrI ACTGGG 1 cut(s) 373
BmsI GCATC 1 cut(s) 705
BmuI ACTGGG 1 cut(s) 373
BoxI GACNNNNGTC 1 cut(s) 1698
BpmI CTGGAG 2 cut(s) 279, 968
Bpu10I CCTNAGC 2 cut(s) 1200, 1551
BpuEI CTTGAG 1 cut(s) 544
BpuMI CCSGG 5 cut(s) 72, 73, 1789, 1843, 1844
Bsa29I ATCGAT 1 cut(s) 1734
BsaAI YACGTR 1 cut(s) 1317
BsaHI GRCGYC 1 cut(s) 777
BsaXI ACNNNNNCTCC 4 cut(s) 255, 285, 1649, 1679
Bse118I RCCGGY 1 cut(s) 468
Bse1I ACTGG 5 cut(s) 262, 379, 985, 1167, 1529
Bse21I CCTNAGG 2 cut(s) 1209, 1535
Bse3DI GCAATG 1 cut(s) 1489
BseBI CCWGG 3 cut(s) 201, 1221, 1280
BseCI ATCGAT 1 cut(s) 1734
BseGI GGATG 5 cut(s) 1288, 1300, 1336, 1816, 2023
BseMI GCAATG 1 cut(s) 1489
BseMII CTCAG 3 cut(s) 917, 1191, 1565
BseNI ACTGG 5 cut(s) 262, 379, 985, 1167, 1529
BsePI GCGCGC 2 cut(s) 389, 434
BseRI GAGGAG 3 cut(s) 233, 276, 1781
BseSI GKGCMC 2 cut(s) 1672, 1843
BseX3I CGGCCG 1 cut(s) 394
BseXI GCAGC 3 cut(s) 317, 894, 1375
BseYI CCCAGC 3 cut(s) 649, 1384, 1388
Bsh1285I CGRYCG 1 cut(s) 397
BshNI GGYRCC 1 cut(s) 983
BshVI ATCGAT 1 cut(s) 1734
BsiEI CGRYCG 1 cut(s) 397
BsiHKCI CYCGRG 6 cut(s) 71, 173, 1032, 1425, 1594, 1842
BsiSI CCGG 5 cut(s) 72, 469, 866, 1788, 1843
BslFI GGGAC 3 cut(s) 29, 361, 1282
BsmAI GTCTC 3 cut(s) 86, 1126, 2039
BsmBI CGTCTC 1 cut(s) 86
BsmFI GGGAC 3 cut(s) 29, 361, 1282
BsmI GAATGC 1 cut(s) 1657
BsoBI CYCGRG 6 cut(s) 71, 173, 1032, 1425, 1594, 1842
Bsp120I GGGCCC 2 cut(s) 1668, 1839
Bsp1286I GDGCHC 4 cut(s) 502, 1047, 1672, 1843
Bsp19I CCATGG 3 cut(s) 1047, 1273, 1672
Bsp68I TCGCGA 2 cut(s) 1500, 1748
BspCNI CTCAG 3 cut(s) 918, 1192, 1564
BspDI ATCGAT 1 cut(s) 1734
BspMAI CTGCAG 2 cut(s) 1641, 1872
BspMI ACCTGC 2 cut(s) 1876, 1969
BspPI GGATC 6 cut(s) 1023, 1083, 1294, 1307, 1520, 1751
BspQI GCTCTTC 1 cut(s) 1080
BspT107I GGYRCC 1 cut(s) 983
BsrBI CCGCTC 1 cut(s) 556
BsrDI GCAATG 1 cut(s) 1489
BsrFI RCCGGY 1 cut(s) 468
BsrI ACTGG 5 cut(s) 262, 379, 985, 1167, 1529
BssAI RCCGGY 1 cut(s) 468
BssHII GCGCGC 2 cut(s) 389, 434
BssNI GRCGYC 1 cut(s) 777
BssSI CACGAG 1 cut(s) 83
BssT1I CCWWGG 5 cut(s) 591, 1047, 1273, 1672, 1929
Bst2BI CACGAG 1 cut(s) 83
Bst2UI CCWGG 3 cut(s) 201, 1221, 1280
Bst4CI ACNGT 4 cut(s) 299, 874, 1141, 2009
Bst6I CTCTTC 3 cut(s) 5, 1080, 1854
BstACI GRCGYC 1 cut(s) 777
BstAPI GCANNNNNTGC 2 cut(s) 275, 453
BstBAI YACGTR 1 cut(s) 1317
BstC8I GCNNGC 6 cut(s) 391, 436, 449, 966, 1728, 2035
BstDEI CTNAG 5 cut(s) 926, 1200, 1209, 1535, 1551
BstDSI CCRYGG 4 cut(s) 59, 1047, 1273, 1672
BstEII GGTNACC 1 cut(s) 1162
BstF5I GGATG 5 cut(s) 1288, 1300, 1336, 1816, 2023
BstH2I RGCGCY 1 cut(s) 59
BstHHI GCGC 6 cut(s) 58, 391, 393, 401, 436, 438
BstMAI GTCTC 3 cut(s) 86, 1126, 2039
BstMCI CGRYCG 1 cut(s) 397
BstNI CCWGG 3 cut(s) 201, 1221, 1280
BstPAI GACNNNNGTC 1 cut(s) 1698
BstPI GGTNACC 1 cut(s) 1162
BstSCI CCNGG 8 cut(s) 70, 71, 199, 1219, 1278, 1787, 1841, 1842
BstSFI CTRYAG 2 cut(s) 1637, 1868
BstSLI GKGCMC 2 cut(s) 1672, 1843
BstV1I GCAGC 3 cut(s) 317, 894, 1375
BstX2I RGATCY 7 cut(s) 1015, 1062, 1075, 1299, 1421, 1525, 1780
BstYI RGATCY 7 cut(s) 1015, 1062, 1075, 1299, 1421, 1525, 1780
BstZI CGGCCG 1 cut(s) 394
Bsu15I ATCGAT 1 cut(s) 1734
Bsu36I CCTNAGG 2 cut(s) 1209, 1535
BsuI GTATCC 2 cut(s) 862, 1959
BsuTUI ATCGAT 1 cut(s) 1734
BtgI CCRYGG 4 cut(s) 59, 1047, 1273, 1672
BtgZI GCGATG 2 cut(s) 1481, 1914
BtsCI GGATG 5 cut(s) 1288, 1300, 1336, 1816, 2023
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 2 cut(s) 39, 1146
BtuMI TCGCGA 2 cut(s) 1500, 1748
BveI ACCTGC 2 cut(s) 1876, 1969
Cac8I GCNNGC 6 cut(s) 391, 436, 449, 966, 1728, 2035
CaiI CAGNNNCTG 3 cut(s) 275, 481, 820
CciNI GCGGCCGC 1 cut(s) 394
CfoI GCGC 6 cut(s) 58, 391, 393, 401, 436, 438
Cfr10I RCCGGY 1 cut(s) 468
Cfr42I CCGCGG 1 cut(s) 62
Cfr9I CCCGGG 2 cut(s) 71, 1842
ClaI ATCGAT 1 cut(s) 1734
CseI GACGC 2 cut(s) 785, 1034
CsiI ACCWGGT 1 cut(s) 199
Csp6I GTAC 1 cut(s) 491
CviAII CATG 6 cut(s) 541, 1048, 1274, 1579, 1589, 1673
CviQI GTAC 1 cut(s) 491
DdeI CTNAG 5 cut(s) 926, 1200, 1209, 1535, 1551
EaeI YGGCCR 2 cut(s) 394, 1276
EagI CGGCCG 1 cut(s) 394
Eam1104I CTCTTC 3 cut(s) 5, 1080, 1854
EarI CTCTTC 3 cut(s) 5, 1080, 1854
EclXI CGGCCG 1 cut(s) 394
Eco130I CCWWGG 5 cut(s) 591, 1047, 1273, 1672, 1929
Eco147I AGGCCT 2 cut(s) 451, 761
Eco24I GRGCYC 4 cut(s) 502, 1047, 1672, 1843
Eco47I GGWCC 5 cut(s) 43, 1269, 1353, 1452, 1888
Eco52I CGGCCG 1 cut(s) 394
Eco57I CTGAAG 2 cut(s) 152, 1542
Eco81I CCTNAGG 2 cut(s) 1209, 1535
Eco88I CYCGRG 6 cut(s) 71, 173, 1032, 1425, 1594, 1842
Eco91I GGTNACC 1 cut(s) 1162
EcoO109I RGGNCCY 3 cut(s) 1204, 1269, 1839
EcoO65I GGTNACC 1 cut(s) 1162
EcoRII CCWGG 3 cut(s) 199, 1219, 1278
EcoT14I CCWWGG 5 cut(s) 591, 1047, 1273, 1672, 1929
EcoT38I GRGCYC 4 cut(s) 502, 1047, 1672, 1843
ErhI CCWWGG 5 cut(s) 591, 1047, 1273, 1672, 1929
Esp3I CGTCTC 1 cut(s) 86
FaeI CATG 6 cut(s) 544, 1051, 1277, 1582, 1592, 1676
FaqI GGGAC 3 cut(s) 29, 361, 1282
FatI CATG 6 cut(s) 540, 1047, 1273, 1578, 1588, 1672
FauI CCCGC 4 cut(s) 54, 55, 231, 1119
FauNDI CATATG 2 cut(s) 784, 891
FbaI TGATCA 2 cut(s) 193, 886
FblI GTMKAC 2 cut(s) 622, 2011
Fnu4HI GCNGC 8 cut(s) 59, 306, 394, 397, 908, 1029, 1364, 1923
FokI GGATG 5 cut(s) 1295, 1307, 1343, 1823, 2030
FriOI GRGCYC 4 cut(s) 502, 1047, 1672, 1843
Fsp4HI GCNGC 8 cut(s) 59, 306, 394, 397, 908, 1029, 1364, 1923
FspBI CTAG 7 cut(s) 155, 551, 765, 848, 1323, 1458, 1778
GlaI GCGC 6 cut(s) 57, 390, 392, 400, 435, 437
GluI GCNGC 8 cut(s) 59, 306, 394, 397, 908, 1029, 1364, 1923
GsaI CCCAGC 3 cut(s) 653, 1388, 1392
GsuI CTGGAG 2 cut(s) 279, 968
HaeII RGCGCY 1 cut(s) 59
HapII CCGG 5 cut(s) 72, 469, 866, 1788, 1843
HgaI GACGC 2 cut(s) 785, 1034
HhaI GCGC 6 cut(s) 58, 391, 393, 401, 436, 438
Hin1I GRCGYC 1 cut(s) 777
Hin1II CATG 6 cut(s) 544, 1051, 1277, 1582, 1592, 1676
Hin6I GCGC 6 cut(s) 56, 389, 391, 399, 434, 436
HinP1I GCGC 6 cut(s) 56, 389, 391, 399, 434, 436
HincII GTYRAC 3 cut(s) 538, 859, 2005
HindII GTYRAC 3 cut(s) 538, 859, 2005
HindIII AAGCTT 1 cut(s) 357
HinfI GANTC 7 cut(s) 159, 478, 624, 830, 1108, 1378, 1769
HpaII CCGG 5 cut(s) 72, 469, 866, 1788, 1843
HphI GGTGA 9 cut(s) 586, 677, 907, 1034, 1174, 1193, 1298, 1585, 1858
Hpy166II GTNNAC 8 cut(s) 538, 623, 853, 859, 1455, 1576, 2005, 2012
Hpy188I TCNGA 9 cut(s) 207, 504, 802, 927, 1042, 1194, 1304, 1312, 1892
Hpy8I GTNNAC 8 cut(s) 538, 623, 853, 859, 1455, 1576, 2005, 2012
HpyAV CCTTC 1 cut(s) 1226
HpyCH4III ACNGT 4 cut(s) 299, 874, 1141, 2009
HpyCH4IV ACGT 5 cut(s) 722, 855, 1316, 1437, 1512
HpyCH4V TGCA 9 cut(s) 269, 364, 584, 788, 1216, 1639, 1798, 1870, 1993
HpyF3I CTNAG 5 cut(s) 926, 1200, 1209, 1535, 1551
HpySE526I ACGT 5 cut(s) 722, 855, 1316, 1437, 1512
Hsp92I GRCGYC 1 cut(s) 777
Hsp92II CATG 6 cut(s) 544, 1051, 1277, 1582, 1592, 1676
HspAI GCGC 6 cut(s) 56, 389, 391, 399, 434, 436
KflI GGGWCCC 1 cut(s) 1269
Ksp22I TGATCA 2 cut(s) 193, 886
KspI CCGCGG 1 cut(s) 62
LguI GCTCTTC 1 cut(s) 1080
LmnI GCTCC 5 cut(s) 220, 505, 1042, 1645, 1912
Lsp1109I GCAGC 3 cut(s) 317, 894, 1375
LweI GCATC 1 cut(s) 705
MabI ACCWGGT 1 cut(s) 199
MaeI CTAG 7 cut(s) 155, 551, 765, 848, 1323, 1458, 1778
MaeII ACGT 5 cut(s) 722, 855, 1316, 1437, 1512
MaeIII GTNAC 4 cut(s) 880, 1022, 1162, 1255
MbiI CCGCTC 1 cut(s) 556
MboII GAAGA 7 cut(s) 22, 986, 1097, 1357, 1535, 1764, 1871
MflI RGATCY 7 cut(s) 1015, 1062, 1075, 1299, 1421, 1525, 1780
MhlI GDGCHC 4 cut(s) 502, 1047, 1672, 1843
MlsI TGGCCA 1 cut(s) 1278
MluCI AATT 3 cut(s) 796, 1489, 1582
MluNI TGGCCA 1 cut(s) 1278
MlyI GAGTC 2 cut(s) 618, 1778
MmeI TCCRAC 5 cut(s) 126, 527, 538, 1743, 1890
Mox20I TGGCCA 1 cut(s) 1278
MscI TGGCCA 1 cut(s) 1278
MseI TTAA 1 cut(s) 1448
MslI CAYNNNNRTG 1 cut(s) 297
Msp20I TGGCCA 1 cut(s) 1278
MspA1I CMGCKG 2 cut(s) 61, 1388
MspI CCGG 5 cut(s) 72, 469, 866, 1788, 1843
MspR9I CCNGG 8 cut(s) 72, 73, 201, 1221, 1280, 1789, 1843, 1844
Mva1269I GAATGC 1 cut(s) 1657
MvaI CCWGG 3 cut(s) 201, 1221, 1280
NciI CCSGG 5 cut(s) 72, 73, 1789, 1843, 1844
NcoI CCATGG 3 cut(s) 1047, 1273, 1672
NdeI CATATG 2 cut(s) 784, 891
NlaIII CATG 6 cut(s) 544, 1051, 1277, 1582, 1592, 1676
NmeAIII GCCGAG 3 cut(s) 256, 994, 1012
NmuCI GTSAC 3 cut(s) 880, 1022, 1162
NotI GCGGCCGC 1 cut(s) 394
NruI TCGCGA 2 cut(s) 1500, 1748
PauI GCGCGC 2 cut(s) 389, 434
PceI AGGCCT 2 cut(s) 451, 761
PciSI GCTCTTC 1 cut(s) 1080
PcsI WCGNNNNNNNCGW 2 cut(s) 318, 839
PctI GAATGC 1 cut(s) 1657
PfeI GAWTC 5 cut(s) 159, 478, 830, 1108, 1378
PkrI GCNGC 8 cut(s) 60, 307, 395, 398, 909, 1030, 1365, 1924
PleI GAGTC 2 cut(s) 618, 1777
PpsI GAGTC 2 cut(s) 618, 1777
Ppu21I YACGTR 1 cut(s) 1317
PpuMI RGGWCCY 1 cut(s) 1269
PshAI GACNNNNGTC 1 cut(s) 1698
Psp1406I AACGTT 1 cut(s) 722
Psp5II RGGWCCY 1 cut(s) 1269
Psp6I CCWGG 3 cut(s) 199, 1219, 1278
PspEI GGTNACC 1 cut(s) 1162
PspFI CCCAGC 3 cut(s) 649, 1384, 1388
PspGI CCWGG 3 cut(s) 199, 1219, 1278
PspOMI GGGCCC 2 cut(s) 1668, 1839
PspPPI RGGWCCY 1 cut(s) 1269
PsrI GAACNNNNNNTAC 2 cut(s) 1568, 1600
PstI CTGCAG 2 cut(s) 1641, 1872
PstNI CAGNNNCTG 3 cut(s) 275, 481, 820
PsuI RGATCY 7 cut(s) 1015, 1062, 1075, 1299, 1421, 1525, 1780
PteI GCGCGC 2 cut(s) 389, 434
PvuII CAGCTG 1 cut(s) 1388
RruI TCGCGA 2 cut(s) 1500, 1748
RsaI GTAC 1 cut(s) 492
RsaNI GTAC 1 cut(s) 491
RseI CAYNNNNRTG 1 cut(s) 297
SacII CCGCGG 1 cut(s) 62
SapI GCTCTTC 1 cut(s) 1080
SaqAI TTAA 1 cut(s) 1448
SatI GCNGC 8 cut(s) 59, 306, 394, 397, 908, 1029, 1364, 1923
SchI GAGTC 2 cut(s) 618, 1778
ScrFI CCNGG 8 cut(s) 72, 73, 201, 1221, 1280, 1789, 1843, 1844
SduI GDGCHC 4 cut(s) 502, 1047, 1672, 1843
SexAI ACCWGGT 1 cut(s) 199
SfaNI GCATC 1 cut(s) 705
SfcI CTRYAG 2 cut(s) 1637, 1868
Sfr303I CCGCGG 1 cut(s) 62
SgrBI CCGCGG 1 cut(s) 62
SinI GGWCC 5 cut(s) 43, 1269, 1353, 1452, 1888
SmaI CCCGGG 2 cut(s) 73, 1844
SmiMI CAYNNNNRTG 1 cut(s) 297
SmlI CTYRAG 1 cut(s) 523
SmoI CTYRAG 1 cut(s) 523
SpeI ACTAGT 1 cut(s) 1457
Sse9I AATT 3 cut(s) 796, 1489, 1582
SseBI AGGCCT 2 cut(s) 451, 761
SspMI CTAG 7 cut(s) 155, 551, 765, 848, 1323, 1458, 1778
StuI AGGCCT 2 cut(s) 451, 761
StyD4I CCNGG 8 cut(s) 70, 71, 199, 1219, 1278, 1787, 1841, 1842
StyI CCWWGG 5 cut(s) 591, 1047, 1273, 1672, 1929
TaaI ACNGT 4 cut(s) 299, 874, 1141, 2009
TaiI ACGT 5 cut(s) 725, 858, 1319, 1440, 1515
TaqI TCGA 3 cut(s) 636, 752, 1734
TasI AATT 3 cut(s) 796, 1489, 1582
TauI GCSGC 5 cut(s) 61, 396, 399, 1031, 1925
TfiI GAWTC 5 cut(s) 159, 478, 830, 1108, 1378
Tru1I TTAA 1 cut(s) 1448
Tru9I TTAA 1 cut(s) 1448
TscAI CASTG 2 cut(s) 39, 1146
TseFI GTSAC 3 cut(s) 880, 1022, 1162
TseI GCWGC 3 cut(s) 305, 907, 1363
Tsp45I GTSAC 3 cut(s) 880, 1022, 1162
TspDTI ATGAA 1 cut(s) 1595
TspGWI ACGGA 2 cut(s) 230, 1057
TspMI CCCGGG 2 cut(s) 71, 1842
TspRI CASTG 2 cut(s) 39, 1146
VpaK11BI GGWCC 5 cut(s) 43, 1269, 1353, 1452, 1888
XcmI CCANNNNNNNNNTGG 2 cut(s) 1054, 1280
XmaI CCCGGG 2 cut(s) 71, 1842
XmiI GTMKAC 2 cut(s) 622, 2011
XspI CTAG 7 cut(s) 155, 551, 765, 848, 1323, 1458, 1778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.