Rmu_sc0001849.1_g000032

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001849.1
OG0000075
Physical Location & Seq
Forward (+)
115361 .. 116185
825 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001849.1_g000032.1.cds

Sequence Viewer

Length: 699 bp
atgttggaacagctggatgctatctttggcgatgacaccgatggtccagtctcatgggatgacattaccgttgatagtggggagacggaggtaaccaaccaagttgtaggcgagacgggtcgacggttgaggcctttgaggtgctaccagaatctgaagaaggcgtggttgggggtgcccaggttaccgaggtgggggcccatggtcaggttggcaagggagatgggatccgattgtgtgagtgtcgatgctcgtgggggcaagaggtctcgaactaagagtgtatctcgctcaaggtcgaagagtgggggcttgccgggttcttgctatgaggttgttgggggtctcgcgtgcaccctaggtgagatcagagttattgatggtgccatcctgcatatggttgtcggcttgcggaactgtcatcgtgaccacaatcatgcaaatgctaaagattggtgccttgggtatcgggaagctcaagagaggctgatgagggtatgtatgttgacgccatggtgtgcggtgcaagctatgaacatgaattaccatgcatcggccgagttggtagcccactttgattgggagatagcccgactgcagcgggagctgaatgctgagagggggcgggcacacgagcttcagagtacattggaccaaggccaggtggagtttgaggatatgaggaaagccaataaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

232

Amino Acids

26.08

Weight (kDa)

7.62

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 175, 383, 456
AccI GTMKAC 1 cut(s) 121
AccII CGCG 1 cut(s) 350
AciI CCGC 4 cut(s) 412, 521, 601, 625
AclWI GGATC 2 cut(s) 222, 235
AcoI YGGCCR 1 cut(s) 555
AcuI CTGAAG 2 cut(s) 176, 623
AcyI GRCGYC 1 cut(s) 509
AfaI GTAC 1 cut(s) 646
AfiI CCNNNNNNNGG 5 cut(s) 194, 207, 397, 553, 661
AjnI CCWGG 2 cut(s) 179, 660
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
AluBI AGCT 5 cut(s) 13, 476, 530, 607, 637
AluI AGCT 5 cut(s) 13, 476, 530, 607, 637
Alw21I GWGCWC 1 cut(s) 356
Alw26I GTCTC 5 cut(s) 55, 77, 107, 273, 350
Alw44I GTGCAC 1 cut(s) 352
AlwI GGATC 2 cut(s) 222, 235
AlwNI CAGNNNCTG 1 cut(s) 154
AoxI GGCC 4 cut(s) 131, 197, 555, 658
ApaI GGGCCC 1 cut(s) 201
ApaLI GTGCAC 1 cut(s) 352
ApeKI GCWGC 1 cut(s) 598
AspA2I CCTAGG 1 cut(s) 358
AspS9I GGNCC 4 cut(s) 44, 197, 198, 652
AsuC2I CCSGG 1 cut(s) 318
AsuHPI GGTGA 1 cut(s) 374
AvaII GGWCC 2 cut(s) 44, 652
AvrII CCTAGG 1 cut(s) 358
BaeGI GKGCMC 4 cut(s) 180, 201, 356, 631
BamHI GGATCC 1 cut(s) 227
BanI GGYRCC 3 cut(s) 175, 383, 456
BanII GRGCYC 1 cut(s) 201
BauI CACGAG 2 cut(s) 252, 632
Bbv12I GWGCWC 1 cut(s) 356
BbvI GCAGC 1 cut(s) 610
BccI CCATC 4 cut(s) 35, 217, 374, 395
BciT130I CCWGG 2 cut(s) 181, 662
BcnI CCSGG 1 cut(s) 318
BcoDI GTCTC 5 cut(s) 55, 77, 107, 273, 350
BfaI CTAG 1 cut(s) 359
BfmI CTRYAG 1 cut(s) 596
BisI GCNGC 1 cut(s) 599
BlnI CCTAGG 1 cut(s) 358
BlsI GCNGC 1 cut(s) 600
Bme1390I CCNGG 3 cut(s) 181, 318, 662
Bme18I GGWCC 2 cut(s) 44, 652
BmgT120I GGNCC 4 cut(s) 44, 197, 198, 652
BmiI GGNNCC 6 cut(s) 177, 198, 199, 229, 385, 458
BmrFI CCNGG 3 cut(s) 181, 318, 662
BmsI GCATC 3 cut(s) 7, 238, 560
BplI GAGNNNNNCTC 2 cut(s) 271, 303
BpuEI CTTGAG 2 cut(s) 277, 462
BpuMI CCSGG 1 cut(s) 318
BsaHI GRCGYC 1 cut(s) 509
BsaI GGTCTC 2 cut(s) 273, 350
BsaJI CCNNGG 7 cut(s) 179, 188, 201, 358, 460, 512, 655
Bsc4I CCNNNNNNNGG 5 cut(s) 194, 207, 397, 553, 661
Bse1I ACTGG 1 cut(s) 47
BseBI CCWGG 2 cut(s) 181, 662
BseDI CCNNGG 7 cut(s) 179, 188, 201, 358, 460, 512, 655
BseGI GGATG 3 cut(s) 22, 64, 387
BseLI CCNNNNNNNGG 5 cut(s) 194, 207, 397, 553, 661
BseMII CTCAG 1 cut(s) 606
BseNI ACTGG 1 cut(s) 47
BseSI GKGCMC 4 cut(s) 180, 201, 356, 631
BseX3I CGGCCG 1 cut(s) 555
BseXI GCAGC 1 cut(s) 610
Bsh1236I CGCG 1 cut(s) 350
Bsh1285I CGRYCG 1 cut(s) 558
BshFI GGCC 4 cut(s) 133, 199, 557, 660
BshNI GGYRCC 3 cut(s) 175, 383, 456
BsiEI CGRYCG 1 cut(s) 558
BsiHKAI GWGCWC 1 cut(s) 356
BsiSI CCGG 1 cut(s) 317
BslI CCNNNNNNNGG 5 cut(s) 194, 207, 397, 553, 661
BsmAI GTCTC 5 cut(s) 55, 77, 107, 273, 350
BsmBI CGTCTC 2 cut(s) 77, 107
BsmI GAATGC 1 cut(s) 616
BsnI GGCC 4 cut(s) 133, 199, 557, 660
Bso31I GGTCTC 2 cut(s) 273, 350
Bsp120I GGGCCC 1 cut(s) 197
Bsp1286I GDGCHC 4 cut(s) 180, 201, 356, 631
Bsp143I GATC 2 cut(s) 227, 366
Bsp19I CCATGG 2 cut(s) 201, 512
BspACI CCGC 4 cut(s) 412, 521, 601, 625
BspANI GGCC 4 cut(s) 133, 199, 557, 660
BspCNI CTCAG 1 cut(s) 607
BspFNI CGCG 1 cut(s) 350
BspLI GGNNCC 6 cut(s) 177, 198, 199, 229, 385, 458
BspMAI CTGCAG 1 cut(s) 600
BspPI GGATC 2 cut(s) 222, 235
BspT107I GGYRCC 3 cut(s) 175, 383, 456
BspTNI GGTCTC 2 cut(s) 273, 350
BsrI ACTGG 1 cut(s) 47
BssECI CCNNGG 7 cut(s) 179, 188, 201, 358, 460, 512, 655
BssMI GATC 2 cut(s) 227, 366
BssNI GRCGYC 1 cut(s) 509
BssSI CACGAG 2 cut(s) 252, 632
BssT1I CCWWGG 5 cut(s) 201, 358, 460, 512, 655
Bst2BI CACGAG 2 cut(s) 252, 632
Bst2UI CCWGG 2 cut(s) 181, 662
Bst4CI ACNGT 3 cut(s) 70, 126, 419
Bst6I CTCTTC 1 cut(s) 296
BstACI GRCGYC 1 cut(s) 509
BstC8I GCNNGC 5 cut(s) 314, 352, 410, 528, 627
BstDEI CTNAG 2 cut(s) 276, 615
BstDSI CCRYGG 2 cut(s) 201, 512
BstEII GGTNACC 2 cut(s) 91, 183
BstF5I GGATG 3 cut(s) 22, 64, 387
BstFNI CGCG 1 cut(s) 350
BstKTI GATC 2 cut(s) 230, 369
BstMAI GTCTC 5 cut(s) 55, 77, 107, 273, 350
BstMBI GATC 2 cut(s) 227, 366
BstMCI CGRYCG 1 cut(s) 558
BstMWI GCNNNNNNNGC 2 cut(s) 527, 604
BstNI CCWGG 2 cut(s) 181, 662
BstPI GGTNACC 2 cut(s) 91, 183
BstSCI CCNGG 3 cut(s) 179, 316, 660
BstSFI CTRYAG 1 cut(s) 596
BstSLI GKGCMC 4 cut(s) 180, 201, 356, 631
BstUI CGCG 1 cut(s) 350
BstV1I GCAGC 1 cut(s) 610
BstX2I RGATCY 1 cut(s) 227
BstXI CCANNNNNNTGG 1 cut(s) 54
BstYI RGATCY 1 cut(s) 227
BstZI CGGCCG 1 cut(s) 555
BsuRI GGCC 4 cut(s) 133, 199, 557, 660
BtgI CCRYGG 2 cut(s) 201, 512
BtgZI GCGATG 1 cut(s) 45
BtsCI GGATG 3 cut(s) 22, 64, 387
Cac8I GCNNGC 5 cut(s) 314, 352, 410, 528, 627
CaiI CAGNNNCTG 1 cut(s) 154
Cfr13I GGNCC 4 cut(s) 44, 197, 198, 652
CseI GACGC 1 cut(s) 517
Csp6I GTAC 1 cut(s) 645
CspCI CAANNNNNGTGG 2 cut(s) 560, 595
CviAII CATG 6 cut(s) 54, 202, 437, 513, 538, 548
CviQI GTAC 1 cut(s) 645
DdeI CTNAG 2 cut(s) 276, 615
DpnI GATC 2 cut(s) 229, 368
DpnII GATC 2 cut(s) 227, 366
EaeI YGGCCR 1 cut(s) 555
EagI CGGCCG 1 cut(s) 555
Eam1104I CTCTTC 1 cut(s) 296
EarI CTCTTC 1 cut(s) 296
EclXI CGGCCG 1 cut(s) 555
Eco130I CCWWGG 5 cut(s) 201, 358, 460, 512, 655
Eco147I AGGCCT 1 cut(s) 133
Eco24I GRGCYC 1 cut(s) 201
Eco31I GGTCTC 2 cut(s) 273, 350
Eco47I GGWCC 2 cut(s) 44, 652
Eco52I CGGCCG 1 cut(s) 555
Eco57I CTGAAG 2 cut(s) 176, 623
Eco91I GGTNACC 2 cut(s) 91, 183
EcoO109I RGGNCCY 1 cut(s) 197
EcoO65I GGTNACC 2 cut(s) 91, 183
EcoRII CCWGG 2 cut(s) 179, 660
EcoT14I CCWWGG 5 cut(s) 201, 358, 460, 512, 655
EcoT22I ATGCAT 1 cut(s) 553
EcoT38I GRGCYC 1 cut(s) 201
ErhI CCWWGG 5 cut(s) 201, 358, 460, 512, 655
Esp3I CGTCTC 2 cut(s) 77, 107
FaeI CATG 6 cut(s) 57, 205, 440, 516, 541, 551
FatI CATG 6 cut(s) 53, 201, 436, 512, 537, 547
FauI CCCGC 2 cut(s) 594, 618
FauNDI CATATG 1 cut(s) 396
FblI GTMKAC 1 cut(s) 121
Fnu4HI GCNGC 1 cut(s) 599
FokI GGATG 3 cut(s) 29, 71, 374
FriOI GRGCYC 1 cut(s) 201
Fsp4HI GCNGC 1 cut(s) 599
FspBI CTAG 1 cut(s) 359
GluI GCNGC 1 cut(s) 599
HaeIII GGCC 4 cut(s) 133, 199, 557, 660
HapII CCGG 1 cut(s) 317
HgaI GACGC 1 cut(s) 517
Hin1I GRCGYC 1 cut(s) 509
Hin1II CATG 6 cut(s) 57, 205, 440, 516, 541, 551
HincII GTYRAC 2 cut(s) 122, 507
HindII GTYRAC 2 cut(s) 122, 507
HinfI GANTC 1 cut(s) 151
HpaII CCGG 1 cut(s) 317
HphI GGTGA 1 cut(s) 374
Hpy166II GTNNAC 3 cut(s) 122, 354, 507
Hpy188I TCNGA 4 cut(s) 156, 232, 371, 642
Hpy188III TCNNGA 4 cut(s) 270, 425, 470, 479
Hpy8I GTNNAC 3 cut(s) 122, 354, 507
Hpy99I CGWCG 1 cut(s) 126
HpyAV CCTTC 1 cut(s) 154
HpyCH4III ACNGT 3 cut(s) 70, 126, 419
HpyCH4V TGCA 6 cut(s) 354, 394, 440, 526, 551, 598
HpyF10VI GCNNNNNNNGC 2 cut(s) 527, 604
HpyF3I CTNAG 2 cut(s) 276, 615
Hsp92I GRCGYC 1 cut(s) 509
Hsp92II CATG 6 cut(s) 57, 205, 440, 516, 541, 551
Kzo9I GATC 2 cut(s) 227, 366
LmnI GCTCC 1 cut(s) 604
LpnPI CCDG 9 cut(s) 60, 161, 166, 193, 193, 330, 404, 647, 674
Lsp1109I GCAGC 1 cut(s) 610
LweI GCATC 3 cut(s) 7, 238, 560
MaeI CTAG 1 cut(s) 359
MaeIII GTNAC 3 cut(s) 91, 183, 425
MalI GATC 2 cut(s) 229, 368
MboI GATC 2 cut(s) 227, 366
MboII GAAGA 2 cut(s) 169, 313
MflI RGATCY 1 cut(s) 227
MhlI GDGCHC 4 cut(s) 180, 201, 356, 631
MluCI AATT 1 cut(s) 541
Mph1103I ATGCAT 1 cut(s) 553
MslI CAYNNNNRTG 2 cut(s) 435, 441
MspA1I CMGCKG 2 cut(s) 13, 601
MspI CCGG 1 cut(s) 317
MspR9I CCNGG 3 cut(s) 181, 318, 662
Mva1269I GAATGC 1 cut(s) 616
MvaI CCWGG 2 cut(s) 181, 662
MvnI CGCG 1 cut(s) 350
MwoI GCNNNNNNNGC 2 cut(s) 527, 604
NciI CCSGG 1 cut(s) 318
NcoI CCATGG 2 cut(s) 201, 512
NdeI CATATG 1 cut(s) 396
NdeII GATC 2 cut(s) 227, 366
NlaIII CATG 6 cut(s) 57, 205, 440, 516, 541, 551
NlaIV GGNNCC 6 cut(s) 177, 198, 199, 229, 385, 458
NmeAIII GCCGAG 1 cut(s) 583
NmuCI GTSAC 1 cut(s) 425
NsiI ATGCAT 1 cut(s) 553
PceI AGGCCT 1 cut(s) 133
PctI GAATGC 1 cut(s) 616
PfeI GAWTC 1 cut(s) 151
PkrI GCNGC 1 cut(s) 600
Psp6I CCWGG 2 cut(s) 179, 660
PspEI GGTNACC 2 cut(s) 91, 183
PspGI CCWGG 2 cut(s) 179, 660
PspN4I GGNNCC 6 cut(s) 177, 198, 199, 229, 385, 458
PspOMI GGGCCC 1 cut(s) 197
PspPI GGNCC 4 cut(s) 44, 197, 198, 652
PsrI GAACNNNNNNTAC 2 cut(s) 527, 559
PstI CTGCAG 1 cut(s) 600
PstNI CAGNNNCTG 1 cut(s) 154
PsuI RGATCY 1 cut(s) 227
PvuII CAGCTG 1 cut(s) 13
RsaI GTAC 1 cut(s) 646
RsaNI GTAC 1 cut(s) 645
RseI CAYNNNNRTG 2 cut(s) 435, 441
SalI GTCGAC 1 cut(s) 120
SatI GCNGC 1 cut(s) 599
Sau3AI GATC 2 cut(s) 227, 366
Sau96I GGNCC 4 cut(s) 44, 197, 198, 652
ScrFI CCNGG 3 cut(s) 181, 318, 662
SduI GDGCHC 4 cut(s) 180, 201, 356, 631
SfaNI GCATC 3 cut(s) 7, 238, 560
SfcI CTRYAG 1 cut(s) 596
SinI GGWCC 2 cut(s) 44, 652
SmiMI CAYNNNNRTG 2 cut(s) 435, 441
SmlI CTYRAG 2 cut(s) 292, 477
SmoI CTYRAG 2 cut(s) 292, 477
Sse9I AATT 1 cut(s) 541
SseBI AGGCCT 1 cut(s) 133
SsiI CCGC 4 cut(s) 412, 521, 601, 625
SspMI CTAG 1 cut(s) 359
StuI AGGCCT 1 cut(s) 133
StyD4I CCNGG 3 cut(s) 179, 316, 660
StyI CCWWGG 5 cut(s) 201, 358, 460, 512, 655
TaaI ACNGT 3 cut(s) 70, 126, 419
TaqI TCGA 4 cut(s) 121, 246, 271, 299
TasI AATT 1 cut(s) 541
TatI WGTACW 1 cut(s) 644
TfiI GAWTC 1 cut(s) 151
TseFI GTSAC 1 cut(s) 425
TseI GCWGC 1 cut(s) 598
Tsp45I GTSAC 1 cut(s) 425
TspDTI ATGAA 2 cut(s) 548, 554
TspGWI ACGGA 1 cut(s) 101
VneI GTGCAC 1 cut(s) 352
VpaK11BI GGWCC 2 cut(s) 44, 652
XcmI CCANNNNNNNNNTGG 2 cut(s) 208, 394
XmaJI CCTAGG 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 121
XspI CTAG 1 cut(s) 359
Zsp2I ATGCAT 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.