Rmu_sc0007877.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007877.1
OG0000075
Physical Location & Seq
Forward (+)
42170 .. 44423
2254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007877.1_g000011.1.cds

Sequence Viewer

Length: 1554 bp
atgtgggctgaagttcccaattccaaaggagctttagtattttctatcttgtctcaacattgctgtggggcagttgtcatccaatgctctgaggcagttgatgagagttttagtgttgtggaagctcagcaggtagcagtgtcccagtatcgggcgcgcggcctagcgattattgaggaccttctgtcgaacatttatgctcgctggaggggcaggccttgcctggttgcaggtcgttggcagaactcggacatggaggctatcctgaccacgctagagaaaaaacgtgcagcgagggttttgggcgagttccccaaagggaagaggggtttctatcgcctatgtaggctttcgatatatgagaggtttgagctggggaggcgttcggcagatatgcttagcgaggccgcgatcaagagtgatgctccatacgttgaggtggatactgatgccattgtcagggagttattgcgagagtcagagacggcgaggtgctatgacgtcgagcttcccgacaaggagtgtgttggagtacctcaacaacaagccgaggagcaggcaggggctaaggggcatgtagctcagggccaccaagagccgggcgtcgaggaaggtgtaaggcagtccccccaagtttggacgggagggatagagcatggtgcagtgaacattccatcggagccggtggtcgaagtggagatctctgtcgaggaactatttgaggaagctgaaaggcgccaaagcgataccagtgccagggctcgtttagtacaagatgttgttttagagctgttggatactgtttttggtggtgacgtcaggggtccggtgtcgctagacgttattactgtcgacagtggtgaagctgaggtgactagccaagccgttggcgatgtagttccagaggcaaaggctcctaaagggcgactggaggttggggtgggcgatgtcgggggtactcaggttgctgagatggagacccatgcccaggctgagatctacaagtgggggctctcgagttctcatgacgaggttgttgggggtctcgcacgcagtcttggcgaaattggcattacatatggtcccatcctacacatggttgccgatttgcgcaattgccatcatgatcgcaactgtgtgaatgctgaggatcctctccttggctattggaaggcccaagagagattgatgaggcactttgatcgggagatcgcccgactgcaaggggagctgaatgccgagagggagcaggcacgcaagcttcaggatgcgttagatcgcggccaagtggagcgtgaggagatgaggcgggagattgatgatgggatcgcgagaaggatggggttggagcgatcgctcgcagtggaggagtctcgtcggcaagaggccgaggatgctgttgccccactgagggagtcaaacctggacctgaccggtaagctgcagagggtcgaggttggcttgaaggctttggaggaggtcagagcccgggttggcgaggttgaagagcgtctgcaagagttggagaggcaggtcctggagcgcgatgcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

517

Amino Acids

57.44

Weight (kDa)

4.88

Isoelectric Point (pI)

49.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 504, 819
Acc16I TGCGCA 1 cut(s) 1112
Acc36I ACCTGC 3 cut(s) 121, 221, 1522
AccB1I GGYRCC 1 cut(s) 735
AccI GTMKAC 1 cut(s) 852
AccII CGCG 6 cut(s) 157, 159, 410, 1281, 1331, 1545
AciI CCGC 4 cut(s) 159, 408, 1281, 1309
AclWI GGATC 3 cut(s) 1145, 1158, 1334
AcoI YGGCCR 1 cut(s) 1282
AcuI CTGAAG 2 cut(s) 30, 1247
AcyI GRCGYC 4 cut(s) 501, 603, 736, 816
AfaI GTAC 3 cut(s) 534, 771, 958
AgeI ACCGGT 1 cut(s) 1433
AgsI TTSAA 2 cut(s) 1465, 1505
AhdI GACNNNNNGTC 1 cut(s) 184
AjnI CCWGG 5 cut(s) 222, 755, 987, 1422, 1536
Alw26I GTCTC 5 cut(s) 57, 476, 971, 1049, 1377
AlwI GGATC 3 cut(s) 1145, 1158, 1334
AlwNI CAGNNNCTG 1 cut(s) 1537
Ama87I CYCGRG 2 cut(s) 1015, 1488
AoxI GGCC 7 cut(s) 160, 215, 405, 586, 1173, 1282, 1386
ApeKI GCWGC 2 cut(s) 290, 1441
AsiGI ACCGGT 1 cut(s) 1433
AsiSI GCGATCGC 1 cut(s) 1355
AspLEI GCGC 5 cut(s) 157, 159, 738, 1113, 1545
AspS9I GGNCC 7 cut(s) 178, 586, 824, 1082, 1174, 1426, 1534
AsuC2I CCSGG 3 cut(s) 600, 1489, 1490
AsuHPI GGTGA 3 cut(s) 824, 872, 883
AvaI CYCGRG 2 cut(s) 1015, 1488
AvaII GGWCC 5 cut(s) 178, 824, 1082, 1426, 1534
BaeI ACNNNNGTAYC 2 cut(s) 948, 981
BamHI GGATCC 1 cut(s) 1150
BanI GGYRCC 1 cut(s) 735
BanII GRGCYC 3 cut(s) 763, 1014, 1489
BbvCI CCTCAGC 2 cut(s) 867, 1146
BbvI GCAGC 2 cut(s) 302, 1428
BccI CCATC 6 cut(s) 682, 967, 1094, 1128, 1316, 1333
BceAI ACGGC 2 cut(s) 501, 869
BcgI CGANNNNNNTGC 4 cut(s) 734, 768, 1184, 1218
BciT130I CCWGG 5 cut(s) 224, 757, 989, 1424, 1538
BciVI GTATCC 2 cut(s) 436, 790
BcnI CCSGG 3 cut(s) 600, 1489, 1490
BcoDI GTCTC 5 cut(s) 57, 476, 971, 1049, 1377
BfaI CTAG 5 cut(s) 164, 275, 836, 876, 1552
BfmI CTRYAG 1 cut(s) 1442
BfoI RGCGCY 1 cut(s) 739
BfuAI ACCTGC 3 cut(s) 121, 221, 1522
BfuI GTATCC 2 cut(s) 436, 790
BglII AGATCT 2 cut(s) 699, 996
BisI GCNGC 5 cut(s) 160, 291, 408, 1282, 1442
BlpI GCTNAGC 2 cut(s) 126, 398
BlsI GCNGC 5 cut(s) 161, 292, 409, 1283, 1443
Bme1390I CCNGG 8 cut(s) 224, 600, 757, 989, 1424, 1489, 1490, 1538
Bme18I GGWCC 5 cut(s) 178, 824, 1082, 1426, 1534
BmeRI GACNNNNNGTC 1 cut(s) 184
BmeT110I CYCGRG 2 cut(s) 1015, 1488
BmgT120I GGNCC 7 cut(s) 178, 586, 824, 1082, 1174, 1426, 1534
BmiI GGNNCC 6 cut(s) 681, 737, 825, 915, 1084, 1152
BmrFI CCNGG 8 cut(s) 224, 600, 757, 989, 1424, 1489, 1490, 1538
BmrI ACTGGG 1 cut(s) 139
BmsI GCATC 5 cut(s) 412, 439, 1258, 1384, 1537
BmuI ACTGGG 1 cut(s) 139
BplI GAGNNNNNCTC 2 cut(s) 409, 441
BpmI CTGGAG 2 cut(s) 226, 950
Bpu10I CCTNAGC 4 cut(s) 567, 582, 867, 1146
Bpu1102I GCTNAGC 2 cut(s) 126, 398
BpuMI CCSGG 3 cut(s) 600, 1489, 1490
BsaHI GRCGYC 4 cut(s) 501, 603, 736, 816
BsaI GGTCTC 2 cut(s) 971, 1049
BsaJI CCNNGG 6 cut(s) 549, 756, 987, 1159, 1389, 1488
BsaWI WCCGGW 2 cut(s) 826, 1433
BsaXI ACNNNNNCTCC 2 cut(s) 21, 51
Bse118I RCCGGY 2 cut(s) 682, 1433
Bse1I ACTGG 3 cut(s) 145, 750, 933
Bse3DI GCAATG 1 cut(s) 58
BseBI CCWGG 5 cut(s) 224, 757, 989, 1424, 1538
BseDI CCNNGG 6 cut(s) 549, 756, 987, 1159, 1389, 1488
BseGI GGATG 5 cut(s) 78, 1086, 1273, 1344, 1399
BseMI GCAATG 1 cut(s) 58
BseMII CTCAG 9 cut(s) 81, 140, 596, 858, 960, 974, 984, 1137, 1400
BseNI ACTGG 3 cut(s) 145, 750, 933
BsePI GCGCGC 1 cut(s) 155
BseRI GAGGAG 4 cut(s) 566, 1313, 1382, 1490
BseXI GCAGC 2 cut(s) 302, 1428
BseYI CCCAGC 1 cut(s) 373
BsgI GTGCAG 2 cut(s) 309, 681
Bsh1236I CGCG 6 cut(s) 157, 159, 410, 1281, 1331, 1545
Bsh1285I CGRYCG 1 cut(s) 1355
BshFI GGCC 7 cut(s) 162, 217, 407, 588, 1175, 1284, 1388
BshNI GGYRCC 1 cut(s) 735
BshTI ACCGGT 1 cut(s) 1433
BsiEI CGRYCG 1 cut(s) 1355
BsiHKCI CYCGRG 2 cut(s) 1015, 1488
BsiSI CCGG 5 cut(s) 599, 683, 827, 1434, 1489
BslFI GGGAC 3 cut(s) 127, 610, 1068
BsmAI GTCTC 5 cut(s) 57, 476, 971, 1049, 1377
BsmBI CGTCTC 1 cut(s) 476
BsmFI GGGAC 3 cut(s) 127, 610, 1068
BsmI GAATGC 2 cut(s) 1147, 1240
BsnI GGCC 7 cut(s) 162, 217, 407, 588, 1175, 1284, 1388
Bso31I GGTCTC 2 cut(s) 971, 1049
BsoBI CYCGRG 2 cut(s) 1015, 1488
Bsp1286I GDGCHC 3 cut(s) 763, 1014, 1489
Bsp1720I GCTNAGC 2 cut(s) 126, 398
Bsp68I TCGCGA 1 cut(s) 1331
BspACI CCGC 4 cut(s) 159, 408, 1281, 1309
BspANI GGCC 7 cut(s) 162, 217, 407, 588, 1175, 1284, 1388
BspCNI CTCAG 9 cut(s) 82, 139, 595, 859, 961, 973, 985, 1138, 1401
BspFNI CGCG 6 cut(s) 157, 159, 410, 1281, 1331, 1545
BspHI TCATGA 2 cut(s) 1024, 1123
BspLI GGNNCC 6 cut(s) 681, 737, 825, 915, 1084, 1152
BspMAI CTGCAG 1 cut(s) 1446
BspMI ACCTGC 3 cut(s) 121, 221, 1522
BspPI GGATC 3 cut(s) 1145, 1158, 1334
BspQI GCTCTTC 1 cut(s) 1500
BspT107I GGYRCC 1 cut(s) 735
BspTNI GGTCTC 2 cut(s) 971, 1049
BsrDI GCAATG 1 cut(s) 58
BsrFI RCCGGY 2 cut(s) 682, 1433
BsrI ACTGG 3 cut(s) 145, 750, 933
BssAI RCCGGY 2 cut(s) 682, 1433
BssECI CCNNGG 6 cut(s) 549, 756, 987, 1159, 1389, 1488
BssHII GCGCGC 1 cut(s) 155
BssNI GRCGYC 4 cut(s) 501, 603, 736, 816
BssT1I CCWWGG 1 cut(s) 1159
Bst2UI CCWGG 5 cut(s) 224, 757, 989, 1424, 1538
Bst4CI ACNGT 4 cut(s) 802, 850, 857, 1136
Bst6I CTCTTC 2 cut(s) 317, 1500
BstACI GRCGYC 4 cut(s) 501, 603, 736, 816
BstAPI GCANNNNNTGC 1 cut(s) 219
BstC8I GCNNGC 9 cut(s) 157, 202, 215, 558, 1051, 1251, 1255, 1259, 1359
BstF5I GGATG 5 cut(s) 78, 1086, 1273, 1344, 1399
BstFNI CGCG 6 cut(s) 157, 159, 410, 1281, 1331, 1545
BstH2I RGCGCY 1 cut(s) 739
BstHHI GCGC 5 cut(s) 157, 159, 738, 1113, 1545
BstMAI GTCTC 5 cut(s) 57, 476, 971, 1049, 1377
BstMCI CGRYCG 1 cut(s) 1355
BstMWI GCNNNNNNNGC 7 cut(s) 210, 219, 379, 1059, 1068, 1228, 1394
BstNI CCWGG 5 cut(s) 224, 757, 989, 1424, 1538
BstNSI RCATGY 1 cut(s) 578
BstSCI CCNGG 8 cut(s) 222, 598, 755, 987, 1422, 1487, 1488, 1536
BstSFI CTRYAG 1 cut(s) 1442
BstUI CGCG 6 cut(s) 157, 159, 410, 1281, 1331, 1545
BstV1I GCAGC 2 cut(s) 302, 1428
BstX2I RGATCY 3 cut(s) 699, 996, 1150
BstXI CCANNNNNNTGG 1 cut(s) 887
BstYI RGATCY 3 cut(s) 699, 996, 1150
BsuI GTATCC 2 cut(s) 436, 790
BsuRI GGCC 7 cut(s) 162, 217, 407, 588, 1175, 1284, 1388
BtgZI GCGATG 2 cut(s) 906, 960
BtsCI GGATG 5 cut(s) 78, 1086, 1273, 1344, 1399
BtsI GCAGTG 3 cut(s) 144, 669, 1368
BtsIMutI CAGTG 6 cut(s) 144, 669, 757, 862, 1368, 1406
BtuMI TCGCGA 1 cut(s) 1331
BveI ACCTGC 3 cut(s) 121, 221, 1522
Cac8I GCNNGC 9 cut(s) 157, 202, 215, 558, 1051, 1251, 1255, 1259, 1359
CaiI CAGNNNCTG 1 cut(s) 1537
CciI TCATGA 2 cut(s) 1024, 1123
CfoI GCGC 5 cut(s) 157, 159, 738, 1113, 1545
Cfr10I RCCGGY 2 cut(s) 682, 1433
Cfr13I GGNCC 7 cut(s) 178, 586, 824, 1082, 1174, 1426, 1534
Cfr9I CCCGGG 1 cut(s) 1488
CseI GACGC 2 cut(s) 592, 1499
Csp6I GTAC 3 cut(s) 533, 770, 957
CspAI ACCGGT 1 cut(s) 1433
CviAII CATG 7 cut(s) 253, 575, 656, 983, 1025, 1096, 1124
CviQI GTAC 3 cut(s) 533, 770, 957
DinI GGCGCC 1 cut(s) 737
DriI GACNNNNNGTC 1 cut(s) 184
EaeI YGGCCR 1 cut(s) 1282
Eam1104I CTCTTC 2 cut(s) 317, 1500
Eam1105I GACNNNNNGTC 1 cut(s) 184
EarI CTCTTC 2 cut(s) 317, 1500
Eco130I CCWWGG 1 cut(s) 1159
Eco147I AGGCCT 1 cut(s) 217
Eco24I GRGCYC 3 cut(s) 763, 1014, 1489
Eco31I GGTCTC 2 cut(s) 971, 1049
Eco47I GGWCC 5 cut(s) 178, 824, 1082, 1426, 1534
Eco57I CTGAAG 2 cut(s) 30, 1247
Eco88I CYCGRG 2 cut(s) 1015, 1488
EcoO109I RGGNCCY 2 cut(s) 178, 1534
EcoRII CCWGG 5 cut(s) 222, 755, 987, 1422, 1536
EcoT14I CCWWGG 1 cut(s) 1159
EcoT38I GRGCYC 3 cut(s) 763, 1014, 1489
EgeI GGCGCC 1 cut(s) 737
EheI GGCGCC 1 cut(s) 737
ErhI CCWWGG 1 cut(s) 1159
Esp3I CGTCTC 1 cut(s) 476
FaeI CATG 7 cut(s) 256, 578, 659, 986, 1028, 1099, 1127
FaqI GGGAC 3 cut(s) 127, 610, 1068
FatI CATG 7 cut(s) 252, 574, 655, 982, 1024, 1095, 1123
FauI CCCGC 1 cut(s) 1302
FauNDI CATATG 1 cut(s) 1078
FblI GTMKAC 1 cut(s) 852
Fnu4HI GCNGC 5 cut(s) 160, 291, 408, 1282, 1442
FokI GGATG 5 cut(s) 65, 1073, 1280, 1351, 1406
FriOI GRGCYC 3 cut(s) 763, 1014, 1489
Fsp4HI GCNGC 5 cut(s) 160, 291, 408, 1282, 1442
FspBI CTAG 5 cut(s) 164, 275, 836, 876, 1552
FspI TGCGCA 1 cut(s) 1112
GlaI GCGC 5 cut(s) 156, 158, 737, 1112, 1544
GluI GCNGC 5 cut(s) 160, 291, 408, 1282, 1442
GsaI CCCAGC 1 cut(s) 377
GsuI CTGGAG 2 cut(s) 226, 950
HaeII RGCGCY 1 cut(s) 739
HaeIII GGCC 7 cut(s) 162, 217, 407, 588, 1175, 1284, 1388
HapII CCGG 5 cut(s) 599, 683, 827, 1434, 1489
HgaI GACGC 2 cut(s) 592, 1499
HhaI GCGC 5 cut(s) 157, 159, 738, 1113, 1545
Hin1I GRCGYC 4 cut(s) 501, 603, 736, 816
Hin1II CATG 7 cut(s) 256, 578, 659, 986, 1028, 1099, 1127
Hin6I GCGC 5 cut(s) 155, 157, 736, 1111, 1543
HinP1I GCGC 5 cut(s) 155, 157, 736, 1111, 1543
HincII GTYRAC 1 cut(s) 853
HindII GTYRAC 1 cut(s) 853
HindIII AAGCTT 1 cut(s) 1259
HinfI GANTC 3 cut(s) 476, 1370, 1415
HpaII CCGG 5 cut(s) 599, 683, 827, 1434, 1489
HphI GGTGA 3 cut(s) 824, 872, 883
Hpy166II GTNNAC 2 cut(s) 667, 853
Hpy188I TCNGA 5 cut(s) 91, 250, 481, 679, 1484
Hpy8I GTNNAC 2 cut(s) 667, 853
Hpy99I CGWCG 3 cut(s) 506, 608, 1380
HpyAV CCTTC 5 cut(s) 191, 605, 1165, 1329, 1459
HpyCH4III ACNGT 4 cut(s) 802, 850, 857, 1136
HpyCH4IV ACGT 5 cut(s) 286, 432, 501, 816, 840
HpyCH4V TGCA 6 cut(s) 230, 290, 662, 1222, 1444, 1516
HpyF10VI GCNNNNNNNGC 7 cut(s) 210, 219, 379, 1059, 1068, 1228, 1394
HpySE526I ACGT 5 cut(s) 286, 432, 501, 816, 840
Hsp92I GRCGYC 4 cut(s) 501, 603, 736, 816
Hsp92II CATG 7 cut(s) 256, 578, 659, 986, 1028, 1099, 1127
HspAI GCGC 5 cut(s) 155, 157, 736, 1111, 1543
KasI GGCGCC 1 cut(s) 735
LguI GCTCTTC 1 cut(s) 1500
Lsp1109I GCAGC 2 cut(s) 302, 1428
LweI GCATC 5 cut(s) 412, 439, 1258, 1384, 1537
MaeI CTAG 5 cut(s) 164, 275, 836, 876, 1552
MaeII ACGT 5 cut(s) 286, 432, 501, 816, 840
MaeIII GTNAC 2 cut(s) 812, 871
MboII GAAGA 2 cut(s) 334, 1517
MfeI CAATTG 1 cut(s) 1114
MflI RGATCY 3 cut(s) 699, 996, 1150
MhlI GDGCHC 3 cut(s) 763, 1014, 1489
MluCI AATT 3 cut(s) 19, 1065, 1114
Mly113I GGCGCC 1 cut(s) 736
MlyI GAGTC 3 cut(s) 485, 1379, 1424
MmeI TCCRAC 4 cut(s) 508, 774, 1326, 1503
MslI CAYNNNNRTG 1 cut(s) 63
MspI CCGG 5 cut(s) 599, 683, 827, 1434, 1489
MspR9I CCNGG 8 cut(s) 224, 600, 757, 989, 1424, 1489, 1490, 1538
MunI CAATTG 1 cut(s) 1114
Mva1269I GAATGC 2 cut(s) 1147, 1240
MvaI CCWGG 5 cut(s) 224, 757, 989, 1424, 1538
MvnI CGCG 6 cut(s) 157, 159, 410, 1281, 1331, 1545
MwoI GCNNNNNNNGC 7 cut(s) 210, 219, 379, 1059, 1068, 1228, 1394
NarI GGCGCC 1 cut(s) 736
NciI CCSGG 3 cut(s) 600, 1489, 1490
NdeI CATATG 1 cut(s) 1078
NlaIII CATG 7 cut(s) 256, 578, 659, 986, 1028, 1099, 1127
NlaIV GGNNCC 6 cut(s) 681, 737, 825, 915, 1084, 1152
NmeAIII GCCGAG 3 cut(s) 574, 1264, 1414
NmuCI GTSAC 2 cut(s) 812, 871
NruI TCGCGA 1 cut(s) 1331
NsbI TGCGCA 1 cut(s) 1112
NspI RCATGY 1 cut(s) 578
PaeR7I CTCGAG 1 cut(s) 1015
PagI TCATGA 2 cut(s) 1024, 1123
PauI GCGCGC 1 cut(s) 155
PceI AGGCCT 1 cut(s) 217
PciSI GCTCTTC 1 cut(s) 1500
PcsI WCGNNNNNNNCGW 1 cut(s) 510
PctI GAATGC 2 cut(s) 1147, 1240
PfoI TCCNGGA 1 cut(s) 1536
PinAI ACCGGT 1 cut(s) 1433
PkrI GCNGC 5 cut(s) 161, 292, 409, 1283, 1443
Ple19I CGATCG 1 cut(s) 1355
PleI GAGTC 3 cut(s) 484, 1378, 1423
PluTI GGCGCC 1 cut(s) 739
PpsI GAGTC 3 cut(s) 484, 1378, 1423
PpuMI RGGWCCY 2 cut(s) 178, 1534
Psp5II RGGWCCY 2 cut(s) 178, 1534
Psp6I CCWGG 5 cut(s) 222, 755, 987, 1422, 1536
PspFI CCCAGC 1 cut(s) 373
PspGI CCWGG 5 cut(s) 222, 755, 987, 1422, 1536
PspN4I GGNNCC 6 cut(s) 681, 737, 825, 915, 1084, 1152
PspPI GGNCC 7 cut(s) 178, 586, 824, 1082, 1174, 1426, 1534
PspPPI RGGWCCY 2 cut(s) 178, 1534
PstI CTGCAG 1 cut(s) 1446
PstNI CAGNNNCTG 1 cut(s) 1537
PsuI RGATCY 3 cut(s) 699, 996, 1150
PteI GCGCGC 1 cut(s) 155
PvuI CGATCG 1 cut(s) 1355
RgaI GCGATCGC 1 cut(s) 1355
RruI TCGCGA 1 cut(s) 1331
RsaI GTAC 3 cut(s) 534, 771, 958
RsaNI GTAC 3 cut(s) 533, 770, 957
RseI CAYNNNNRTG 1 cut(s) 63
SalI GTCGAC 1 cut(s) 851
SapI GCTCTTC 1 cut(s) 1500
SatI GCNGC 5 cut(s) 160, 291, 408, 1282, 1442
Sau96I GGNCC 7 cut(s) 178, 586, 824, 1082, 1174, 1426, 1534
SchI GAGTC 3 cut(s) 485, 1379, 1424
ScrFI CCNGG 8 cut(s) 224, 600, 757, 989, 1424, 1489, 1490, 1538
SduI GDGCHC 3 cut(s) 763, 1014, 1489
SfaAI GCGATCGC 1 cut(s) 1355
SfaNI GCATC 5 cut(s) 412, 439, 1258, 1384, 1537
SfcI CTRYAG 1 cut(s) 1442
SfoI GGCGCC 1 cut(s) 737
Sfr274I CTCGAG 1 cut(s) 1015
SgfI GCGATCGC 1 cut(s) 1355
SinI GGWCC 5 cut(s) 178, 824, 1082, 1426, 1534
SlaI CTCGAG 1 cut(s) 1015
SmaI CCCGGG 1 cut(s) 1490
SmiMI CAYNNNNRTG 1 cut(s) 63
SmlI CTYRAG 1 cut(s) 1015
SmoI CTYRAG 1 cut(s) 1015
Sse9I AATT 3 cut(s) 19, 1065, 1114
SseBI AGGCCT 1 cut(s) 217
SsiI CCGC 4 cut(s) 159, 408, 1281, 1309
SspDI GGCGCC 1 cut(s) 735
SspMI CTAG 5 cut(s) 164, 275, 836, 876, 1552
StuI AGGCCT 1 cut(s) 217
StyD4I CCNGG 8 cut(s) 222, 598, 755, 987, 1422, 1487, 1488, 1536
StyI CCWWGG 1 cut(s) 1159
TaaI ACNGT 4 cut(s) 802, 850, 857, 1136
TaiI ACGT 5 cut(s) 289, 435, 504, 819, 843
TaqI TCGA 9 cut(s) 188, 353, 504, 606, 690, 708, 852, 1016, 1452
TasI AATT 3 cut(s) 19, 1065, 1114
TatI WGTACW 1 cut(s) 769
TauI GCSGC 3 cut(s) 162, 410, 1284
TscAI CASTG 6 cut(s) 144, 669, 757, 862, 1368, 1413
TseFI GTSAC 2 cut(s) 812, 871
TseI GCWGC 2 cut(s) 290, 1441
Tsp45I GTSAC 2 cut(s) 812, 871
TspMI CCCGGG 1 cut(s) 1488
TspRI CASTG 6 cut(s) 144, 669, 757, 862, 1368, 1413
VpaK11BI GGWCC 5 cut(s) 178, 824, 1082, 1426, 1534
XceI RCATGY 1 cut(s) 578
XcmI CCANNNNNNNNNTGG 1 cut(s) 1093
XhoI CTCGAG 1 cut(s) 1015
XmaI CCCGGG 1 cut(s) 1488
XmiI GTMKAC 1 cut(s) 852
XspI CTAG 5 cut(s) 164, 275, 836, 876, 1552
ZraI GACGTC 2 cut(s) 502, 817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.