Rmu_co8458731.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8458731.1
OG0000075
Physical Location & Seq
Reverse (-)
816 .. 1736
921 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8458731.1_g000002.1.cds

Sequence Viewer

Length: 873 bp
atgaagcatgcaattgacgataagattgcgagaaggatggaattggagggatcacttgcagtggaggagtctcggcggcgggaggccgaggatgctgtttccccactgagggagtcaaatctggacttaaccggtaagctacagccagctgaagttggtttgaaggccctggaggagattaggacccgggagggcgatgccaagttagagcttcatggctcggctttggaaattttggcttcttatctcgatcgcgttgtggagttggatgggcaagttggtactttgcaaagagaagttgaccgcctgagggtcattgagaggcaagctggcgagagggatgcggagttggagcggttgaggaaagagttggtcgaggaacgaacccgggctagcgctttcgctgatgattatatccgcttacgtgctgttgccgaggctcatgttgacaacctccacaaagccaagccagatggcaggacgagggcggttgatcactaccttttgtcgtccaatttccaagagaagataaataaggccttctcggatggggcattgcattctatttgtgatgttatccctgctggctggattgatcatgataaaatggttcgcgatatgcaagcgaagaaggctgcaagatcacaagacagggccgcgagtgatggttgtggtggagggatcgttatccgcgaaccgtctgttgccacagagaaagtctcgagccaggtcggtgaacgagaggtggagggtgctaatgtgggcgagcaaggggaagtgctcgtggatgcccagaatgtgcaggagggcgagaatgttggagagcgaggcatgacagtggagcgggtgtatagtgtcgagggtgagacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

290

Amino Acids

32.12

Weight (kDa)

5.04

Isoelectric Point (pI)

35.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 355, 844
AccII CGCG 4 cut(s) 255, 615, 659, 693
AclWI GGATC 2 cut(s) 58, 689
AcsI RAATTY 1 cut(s) 231
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 1 cut(s) 283
AfeI AGCGCT 1 cut(s) 397
AfiI CCNNNNNNNGG 3 cut(s) 108, 109, 310
AgeI ACCGGT 1 cut(s) 131
AgsI TTSAA 1 cut(s) 163
AjnI CCWGG 2 cut(s) 168, 726
AluBI AGCT 4 cut(s) 139, 149, 211, 329
AluI AGCT 4 cut(s) 139, 149, 211, 329
Alw21I GWGCWC 1 cut(s) 783
Alw26I GTCTC 3 cut(s) 75, 724, 860
AlwI GGATC 2 cut(s) 58, 689
Ama87I CYCGRG 3 cut(s) 186, 387, 721
Aor51HI AGCGCT 1 cut(s) 397
AoxI GGCC 4 cut(s) 84, 165, 537, 654
ApeKI GCWGC 1 cut(s) 635
ApoI RAATTY 1 cut(s) 231
AsiGI ACCGGT 1 cut(s) 131
AspLEI GCGC 1 cut(s) 398
AspS9I GGNCC 3 cut(s) 166, 183, 654
AsuC2I CCSGG 4 cut(s) 187, 188, 388, 389
AsuHPI GGTGA 1 cut(s) 746
AsuNHI GCTAGC 1 cut(s) 392
AvaI CYCGRG 3 cut(s) 186, 387, 721
AvaII GGWCC 1 cut(s) 183
AxyI CCTNAGG 1 cut(s) 308
BauI CACGAG 1 cut(s) 782
Bbv12I GWGCWC 1 cut(s) 783
BbvI GCAGC 1 cut(s) 622
BccI CCATC 5 cut(s) 31, 263, 467, 542, 659
BcgI CGANNNNNNTGC 4 cut(s) 8, 42, 323, 357
BciT130I CCWGG 2 cut(s) 170, 728
BclI TGATCA 2 cut(s) 493, 595
BcnI CCSGG 4 cut(s) 187, 188, 388, 389
BcoDI GTCTC 3 cut(s) 75, 724, 860
BfaI CTAG 1 cut(s) 393
BfmI CTRYAG 1 cut(s) 140
BfoI RGCGCY 1 cut(s) 399
BisI GCNGC 3 cut(s) 77, 636, 657
BlsI GCNGC 3 cut(s) 78, 637, 658
Bme1390I CCNGG 6 cut(s) 170, 187, 188, 388, 389, 728
Bme18I GGWCC 1 cut(s) 183
BmeT110I CYCGRG 3 cut(s) 186, 387, 721
BmgT120I GGNCC 3 cut(s) 166, 183, 654
BmiI GGNNCC 1 cut(s) 185
BmrFI CCNGG 6 cut(s) 170, 187, 188, 388, 389, 728
BmsI GCATC 4 cut(s) 82, 187, 331, 778
BmtI GCTAGC 1 cut(s) 396
BplI GAGNNNNNCTC 2 cut(s) 704, 736
BpmI CTGGAG 1 cut(s) 191
BpuMI CCSGG 4 cut(s) 187, 188, 388, 389
BsaAI YACGTR 1 cut(s) 425
BsaBI GATNNNNATC 1 cut(s) 686
BsaJI CCNNGG 5 cut(s) 87, 168, 186, 387, 435
BsaWI WCCGGW 1 cut(s) 131
BsaXI ACNNNNNCTCC 4 cut(s) 669, 699, 833, 863
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 109, 310
Bse118I RCCGGY 1 cut(s) 131
Bse21I CCTNAGG 1 cut(s) 308
Bse3DI GCAATG 1 cut(s) 554
Bse8I GATNNNNATC 1 cut(s) 686
BseBI CCWGG 2 cut(s) 170, 728
BseDI CCNNGG 5 cut(s) 87, 168, 186, 387, 435
BseGI GGATG 6 cut(s) 42, 97, 274, 346, 553, 793
BseJI GATNNNNATC 1 cut(s) 686
BseLI CCNNNNNNNGG 3 cut(s) 108, 109, 310
BseMI GCAATG 1 cut(s) 554
BseMII CTCAG 2 cut(s) 98, 299
BseRI GAGGAG 2 cut(s) 80, 188
BseXI GCAGC 1 cut(s) 622
BsgI GTGCAG 1 cut(s) 821
Bsh1236I CGCG 4 cut(s) 255, 615, 659, 693
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 4 cut(s) 86, 167, 539, 656
BshTI ACCGGT 1 cut(s) 131
BsiEI CGRYCG 1 cut(s) 253
BsiHKAI GWGCWC 1 cut(s) 783
BsiHKCI CYCGRG 3 cut(s) 186, 387, 721
BsiSI CCGG 3 cut(s) 132, 187, 388
BslI CCNNNNNNNGG 3 cut(s) 108, 109, 310
BsmAI GTCTC 3 cut(s) 75, 724, 860
BsmI GAATGC 1 cut(s) 559
BsnI GGCC 4 cut(s) 86, 167, 539, 656
BsoBI CYCGRG 3 cut(s) 186, 387, 721
Bsp1286I GDGCHC 1 cut(s) 783
Bsp143I GATC 6 cut(s) 50, 250, 493, 595, 641, 681
Bsp68I TCGCGA 1 cut(s) 615
BspANI GGCC 4 cut(s) 86, 167, 539, 656
BspCNI CTCAG 2 cut(s) 99, 300
BspFNI CGCG 4 cut(s) 255, 615, 659, 693
BspHI TCATGA 1 cut(s) 598
BspLI GGNNCC 1 cut(s) 185
BspOI GCTAGC 1 cut(s) 396
BspPI GGATC 2 cut(s) 58, 689
BsrBI CCGCTC 2 cut(s) 355, 844
BsrDI GCAATG 1 cut(s) 554
BsrFI RCCGGY 1 cut(s) 131
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 5 cut(s) 87, 168, 186, 387, 435
BssMI GATC 6 cut(s) 50, 250, 493, 595, 641, 681
BssSI CACGAG 1 cut(s) 782
Bst2BI CACGAG 1 cut(s) 782
Bst2UI CCWGG 2 cut(s) 170, 728
Bst4CI ACNGT 2 cut(s) 699, 838
BstBAI YACGTR 1 cut(s) 425
BstC8I GCNNGC 8 cut(s) 9, 147, 327, 331, 394, 586, 624, 767
BstDEI CTNAG 2 cut(s) 107, 308
BstF5I GGATG 6 cut(s) 42, 97, 274, 346, 553, 793
BstFNI CGCG 4 cut(s) 255, 615, 659, 693
BstH2I RGCGCY 1 cut(s) 399
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 6 cut(s) 53, 253, 496, 598, 644, 684
BstMAI GTCTC 3 cut(s) 75, 724, 860
BstMBI GATC 6 cut(s) 50, 250, 493, 595, 641, 681
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 2 cut(s) 92, 632
BstNI CCWGG 2 cut(s) 170, 728
BstNSI RCATGY 1 cut(s) 11
BstSCI CCNGG 6 cut(s) 168, 185, 186, 386, 387, 726
BstSFI CTRYAG 1 cut(s) 140
BstUI CGCG 4 cut(s) 255, 615, 659, 693
BstV1I GCAGC 1 cut(s) 622
Bsu36I CCTNAGG 1 cut(s) 308
BsuRI GGCC 4 cut(s) 86, 167, 539, 656
BtgZI GCGATG 1 cut(s) 210
BtsCI GGATG 6 cut(s) 42, 97, 274, 346, 553, 793
BtsI GCAGTG 1 cut(s) 66
BtsIMutI CAGTG 3 cut(s) 66, 104, 843
BtuMI TCGCGA 1 cut(s) 615
Cac8I GCNNGC 8 cut(s) 9, 147, 327, 331, 394, 586, 624, 767
CciI TCATGA 1 cut(s) 598
CfoI GCGC 1 cut(s) 398
Cfr10I RCCGGY 1 cut(s) 131
Cfr13I GGNCC 3 cut(s) 166, 183, 654
Cfr9I CCCGGG 2 cut(s) 186, 387
Csp6I GTAC 1 cut(s) 282
CspAI ACCGGT 1 cut(s) 131
CviAII CATG 5 cut(s) 8, 215, 443, 599, 832
CviQI GTAC 1 cut(s) 282
DdeI CTNAG 2 cut(s) 107, 308
DpnI GATC 6 cut(s) 52, 252, 495, 597, 643, 683
DpnII GATC 6 cut(s) 50, 250, 493, 595, 641, 681
Eco147I AGGCCT 1 cut(s) 539
Eco47I GGWCC 1 cut(s) 183
Eco47III AGCGCT 1 cut(s) 397
Eco57I CTGAAG 1 cut(s) 171
Eco81I CCTNAGG 1 cut(s) 308
Eco88I CYCGRG 3 cut(s) 186, 387, 721
EcoO109I RGGNCCY 2 cut(s) 166, 183
EcoRII CCWGG 2 cut(s) 168, 726
FaeI CATG 5 cut(s) 11, 218, 446, 602, 835
FaiI YATR 9 cut(s) 9, 216, 414, 444, 600, 620, 833, 852, 871
FatI CATG 5 cut(s) 7, 214, 442, 598, 831
FauI CCCGC 2 cut(s) 72, 837
FbaI TGATCA 2 cut(s) 493, 595
Fnu4HI GCNGC 3 cut(s) 77, 636, 657
FokI GGATG 6 cut(s) 49, 104, 281, 353, 560, 800
Fsp4HI GCNGC 3 cut(s) 77, 636, 657
FspBI CTAG 1 cut(s) 393
GlaI GCGC 1 cut(s) 397
GluI GCNGC 3 cut(s) 77, 636, 657
GsuI CTGGAG 1 cut(s) 191
HaeII RGCGCY 1 cut(s) 399
HaeIII GGCC 4 cut(s) 86, 167, 539, 656
HapII CCGG 3 cut(s) 132, 187, 388
HhaI GCGC 1 cut(s) 398
Hin1II CATG 5 cut(s) 11, 218, 446, 602, 835
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HincII GTYRAC 2 cut(s) 301, 448
HindII GTYRAC 2 cut(s) 301, 448
HinfI GANTC 2 cut(s) 68, 113
HpaII CCGG 3 cut(s) 132, 187, 388
HphI GGTGA 1 cut(s) 746
Hpy166II GTNNAC 3 cut(s) 301, 448, 737
Hpy188I TCNGA 1 cut(s) 547
Hpy188III TCNNGA 5 cut(s) 122, 248, 599, 614, 721
Hpy8I GTNNAC 3 cut(s) 301, 448, 737
HpyAV CCTTC 4 cut(s) 27, 157, 550, 625
HpyCH4III ACNGT 2 cut(s) 699, 838
HpyCH4IV ACGT 1 cut(s) 424
HpyCH4V TGCA 7 cut(s) 11, 59, 289, 559, 622, 638, 802
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 632
HpyF3I CTNAG 2 cut(s) 107, 308
HpySE526I ACGT 1 cut(s) 424
Hsp92II CATG 5 cut(s) 11, 218, 446, 602, 835
HspAI GCGC 1 cut(s) 396
Ksp22I TGATCA 2 cut(s) 493, 595
Kzo9I GATC 6 cut(s) 50, 250, 493, 595, 641, 681
LmnI GCTCC 2 cut(s) 352, 841
Lsp1109I GCAGC 1 cut(s) 622
LweI GCATC 4 cut(s) 82, 187, 331, 778
MaeI CTAG 1 cut(s) 393
MaeII ACGT 1 cut(s) 424
MalI GATC 6 cut(s) 52, 252, 495, 597, 643, 683
MbiI CCGCTC 2 cut(s) 355, 844
MboI GATC 6 cut(s) 50, 250, 493, 595, 641, 681
MboII GAAGA 2 cut(s) 538, 640
MfeI CAATTG 1 cut(s) 12
MhlI GDGCHC 1 cut(s) 783
MluCI AATT 4 cut(s) 12, 41, 231, 514
MlyI GAGTC 2 cut(s) 77, 122
MmeI TCCRAC 3 cut(s) 246, 330, 799
MseI TTAA 1 cut(s) 128
MslI CAYNNNNRTG 1 cut(s) 836
MspA1I CMGCKG 1 cut(s) 149
MspI CCGG 3 cut(s) 132, 187, 388
MspR9I CCNGG 6 cut(s) 170, 187, 188, 388, 389, 728
MunI CAATTG 1 cut(s) 12
Mva1269I GAATGC 1 cut(s) 559
MvaI CCWGG 2 cut(s) 170, 728
MvnI CGCG 4 cut(s) 255, 615, 659, 693
MwoI GCNNNNNNNGC 2 cut(s) 92, 632
NciI CCSGG 4 cut(s) 187, 188, 388, 389
NdeII GATC 6 cut(s) 50, 250, 493, 595, 641, 681
NheI GCTAGC 1 cut(s) 392
NlaIII CATG 5 cut(s) 11, 218, 446, 602, 835
NlaIV GGNNCC 1 cut(s) 185
NmeAIII GCCGAG 4 cut(s) 52, 112, 200, 460
NruI TCGCGA 1 cut(s) 615
NspI RCATGY 1 cut(s) 11
PaeI GCATGC 1 cut(s) 11
PaeR7I CTCGAG 1 cut(s) 721
PagI TCATGA 1 cut(s) 598
PceI AGGCCT 1 cut(s) 539
PcsI WCGNNNNNNNCGW 1 cut(s) 690
PctI GAATGC 1 cut(s) 559
PinAI ACCGGT 1 cut(s) 131
PkrI GCNGC 3 cut(s) 78, 637, 658
Ple19I CGATCG 1 cut(s) 253
PleI GAGTC 2 cut(s) 76, 121
PpsI GAGTC 2 cut(s) 76, 121
Ppu21I YACGTR 1 cut(s) 425
PpuMI RGGWCCY 1 cut(s) 183
Psp5II RGGWCCY 1 cut(s) 183
Psp6I CCWGG 2 cut(s) 168, 726
PspGI CCWGG 2 cut(s) 168, 726
PspN4I GGNNCC 1 cut(s) 185
PspPI GGNCC 3 cut(s) 166, 183, 654
PspPPI RGGWCCY 1 cut(s) 183
PvuI CGATCG 1 cut(s) 253
PvuII CAGCTG 1 cut(s) 149
RruI TCGCGA 1 cut(s) 615
RsaI GTAC 1 cut(s) 283
RsaNI GTAC 1 cut(s) 282
RseI CAYNNNNRTG 1 cut(s) 836
SaqAI TTAA 1 cut(s) 128
SatI GCNGC 3 cut(s) 77, 636, 657
Sau3AI GATC 6 cut(s) 50, 250, 493, 595, 641, 681
Sau96I GGNCC 3 cut(s) 166, 183, 654
SchI GAGTC 2 cut(s) 77, 122
ScrFI CCNGG 6 cut(s) 170, 187, 188, 388, 389, 728
SduI GDGCHC 1 cut(s) 783
SetI ASST 9 cut(s) 141, 151, 213, 331, 427, 456, 504, 732, 747
SfaNI GCATC 4 cut(s) 82, 187, 331, 778
SfcI CTRYAG 1 cut(s) 140
Sfr274I CTCGAG 1 cut(s) 721
SinI GGWCC 1 cut(s) 183
SlaI CTCGAG 1 cut(s) 721
SmaI CCCGGG 2 cut(s) 188, 389
SmiMI CAYNNNNRTG 1 cut(s) 836
SmlI CTYRAG 1 cut(s) 721
SmoI CTYRAG 1 cut(s) 721
SphI GCATGC 1 cut(s) 11
Sse9I AATT 4 cut(s) 12, 41, 231, 514
SseBI AGGCCT 1 cut(s) 539
SspMI CTAG 1 cut(s) 393
StuI AGGCCT 1 cut(s) 539
StyD4I CCNGG 6 cut(s) 168, 185, 186, 386, 387, 726
TaaI ACNGT 2 cut(s) 699, 838
TaiI ACGT 1 cut(s) 427
TaqI TCGA 4 cut(s) 249, 375, 722, 858
TasI AATT 4 cut(s) 12, 41, 231, 514
TauI GCSGC 2 cut(s) 79, 659
Tru1I TTAA 1 cut(s) 128
Tru9I TTAA 1 cut(s) 128
TscAI CASTG 3 cut(s) 66, 111, 843
TseI GCWGC 1 cut(s) 635
TspDTI ATGAA 2 cut(s) 17, 203
TspMI CCCGGG 2 cut(s) 186, 387
TspRI CASTG 3 cut(s) 66, 111, 843
VpaK11BI GGWCC 1 cut(s) 183
XapI RAATTY 1 cut(s) 231
XceI RCATGY 1 cut(s) 11
XhoI CTCGAG 1 cut(s) 721
XmaI CCCGGG 2 cut(s) 186, 387
XspI CTAG 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.