Rroxscaffold_4G00298090

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000075
Physical Location & Seq
Forward (+)
17946964 .. 17950142
3179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00298090.1

Sequence Viewer

Length: 1467 bp
ATGGCGCATGAGAACTACGGCCGCGGTAGGCAAGAGGGATCCTCCCGTGGTGGTGTCGCGCGCGCCTCATGGCGGGGAAGAGGGTGCTTCTCTCGCCGCCGTGAAGGTGGTTCCCGAGGGGGCGCCGCGGTGATTCCTAGGGAGTTGGGTGAGGGCGATTCCCAAGGAGGCGGTGGGGGAGCTTCTAGCGAGAGTTCCCGAGGAAGTGGTGAGGGTTCTTCTCGAGGAGTTCCGGTAGGGTTGAGCAACCCGTGGTGCCCGATCTACCCGATCGAGGCGATGTCGAGCGTTTTTGTGCATCGTAGTGAGGCAGAGGTGAATTTGACCATCGCCGGAGCGGAAGCTTGTGGCAAGGGTGACGGCACGTTTTCGAAGGGGTCGAGGGGATTCTATCGTTTGTGTAGGCGTCCGATATACAAGAAATTTGAGTTAGGGAGGTTTCGGGTGAGGGGTTCTCCTTTGCTTGGTGTGCCGTCGTATGCCGTGTGGGGAGGATCTTGGTGGAGTGACCCAGACTTGGAGCCCACGGTGGAGGTGAAGATCTCTCGTCGAGGAGCCATCGGTGTAAGATGCGGTTCTGCAACACCGGAAACCATTTTTGGTGATGGAATTGGCGATCCTGTCTCGCCGGAAGTCATCACCGTGGATAATGGAGAGGCAGAGGTGACCAGCCAAGCCGTTGTCGAGATAGGTCTCGATAGTCGAGGTACCGAGGTGCAACCTAAGTCCGGAGAGGGTATAATCGGGGTTGCTCGGGTTACCAAGACGGGGACCCGGATGGAGAGGGGAATGGAGTTTGAGTGTCGACACCCGTTCTCGTACATACGGATCGGGTCGAGGAAGAGGACTACCTCACGGCTTCGTCTCGGAGTCCCCGCTGGTGTCACTATTGACACTTGTGGTAGTAAAAGGTCTCGGTGGATAATGTATCGCGCTAGAGGTCTACAAGTGAGGGTTCTCACAATGAGCCTACCGCAATGGCGTGAGTGTGGAAGATCCACACCCGGGTATCCGGAGGCGCGGGAGAGGCTAATAAGGTCAAACCCGGATCTTACGGGAAGCCGCAAAGTGGAGGATGGCCCGAGATTGGTAGATCGTAAGGGCCCCGTGGGCCAGCCGAAGAGCATTTGCAGGACTTGGAAAGGCAGGTTCAAGAACACGATGTTGAGTTGGAGCTTCGGCAGCCGCCTTGGAGAGTTTGGCTCCTTATCCCCATCGTGTAGTGGATTTGGAGGGGTAGGTTGCGAGTGGTGGTCGGAGTTCGGGGTCGTGATCCCGGAGCAGCCTGTACCGGAGAGTGCATCGGGACAAGTTGGTGATCTCGATGTGGAGGGTGCTGTTGGTGAGCATGAGGCCCTCGCGGATATCGGGGGCGAGATGCAAGGCGAGAATGCCGGAGAGCAAGACGGGGTGGAGGGGCGAGATCGGGTAGAGGAGCGGACAAGTAGTGCCGAGGGCGAGACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

488

Amino Acids

52.36

Weight (kDa)

8.73

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1137
Acc65I GGTACC 1 cut(s) 707
AccB1I GGYRCC 3 cut(s) 122, 255, 707
AccBSI CCGCTC 2 cut(s) 338, 1438
AccI GTMKAC 2 cut(s) 805, 943
AccII CGCG 8 cut(s) 24, 59, 61, 63, 128, 933, 1021, 1361
AccIII TCCGGA 2 cut(s) 728, 1012
AclWI GGATC 8 cut(s) 33, 46, 502, 611, 836, 990, 1056, 1267
AcoI YGGCCR 1 cut(s) 19
AcsI RAATTY 2 cut(s) 319, 422
AcyI GRCGYC 2 cut(s) 123, 406
AfaI GTAC 3 cut(s) 709, 821, 1290
AfiI CCNNNNNNNGG 9 cut(s) 72, 274, 464, 517, 728, 768, 1005, 1069, 1087
AgsI TTSAA 1 cut(s) 1153
AjuI GAANNNNNNNTTGG 2 cut(s) 582, 614
AluBI AGCT 3 cut(s) 182, 344, 1176
AluI AGCT 3 cut(s) 182, 344, 1176
Alw26I GTCTC 5 cut(s) 628, 698, 869, 918, 1454
AlwI GGATC 8 cut(s) 33, 46, 502, 611, 836, 990, 1056, 1267
Ama87I CYCGRG 6 cut(s) 114, 198, 222, 753, 1004, 1081
Aor13HI TCCGGA 2 cut(s) 728, 1012
AoxI GGCC 5 cut(s) 19, 1078, 1102, 1111, 1353
ApaI GGGCCC 1 cut(s) 1106
ApeKI GCWGC 2 cut(s) 1182, 1282
ApoI RAATTY 2 cut(s) 319, 422
Asp718I GGTACC 1 cut(s) 707
AspA2I CCTAGG 1 cut(s) 137
AspLEI GCGC 7 cut(s) 7, 61, 63, 65, 125, 935, 1021
AspS9I GGNCC 6 cut(s) 771, 1079, 1102, 1103, 1111, 1354
AsuC2I CCSGG 5 cut(s) 775, 1005, 1006, 1046, 1277
AsuII TTCGAA 1 cut(s) 371
AvaI CYCGRG 6 cut(s) 114, 198, 222, 753, 1004, 1081
AvaII GGWCC 1 cut(s) 771
AvrII CCTAGG 1 cut(s) 137
BaeGI GKGCMC 2 cut(s) 260, 1106
BaeI ACNNNNGTAYC 4 cut(s) 699, 732, 992, 1025
BamHI GGATCC 1 cut(s) 38
BanI GGYRCC 3 cut(s) 122, 255, 707
BanII GRGCYC 2 cut(s) 525, 1106
BbvI GCAGC 2 cut(s) 1194, 1294
BccI CCATC 6 cut(s) 335, 566, 599, 772, 1070, 1222
BceAI ACGGC 7 cut(s) 34, 84, 376, 457, 467, 662, 872
BciVI GTATCC 1 cut(s) 1020
BcnI CCSGG 5 cut(s) 775, 1005, 1006, 1046, 1277
BcoDI GTCTC 5 cut(s) 628, 698, 869, 918, 1454
BfaI CTAG 4 cut(s) 138, 186, 936, 1465
BfoI RGCGCY 1 cut(s) 126
BfuAI ACCTGC 1 cut(s) 1137
BfuI GTATCC 1 cut(s) 1020
BglI GCCNNNNNGGC 1 cut(s) 1110
BglII AGATCT 1 cut(s) 540
BisI GCNGC 7 cut(s) 22, 97, 126, 1063, 1183, 1186, 1283
BlnI CCTAGG 1 cut(s) 137
BlsI GCNGC 7 cut(s) 23, 98, 127, 1064, 1184, 1187, 1284
Bme1390I CCNGG 5 cut(s) 775, 1005, 1006, 1046, 1277
Bme18I GGWCC 1 cut(s) 771
BmeT110I CYCGRG 6 cut(s) 114, 198, 222, 753, 1004, 1081
BmgT120I GGNCC 6 cut(s) 771, 1079, 1102, 1103, 1111, 1354
BmrFI CCNGG 5 cut(s) 775, 1005, 1006, 1046, 1277
BmsI GCATC 4 cut(s) 307, 560, 1310, 1368
BplI GAGNNNNNCTC 6 cut(s) 26, 58, 439, 471, 1187, 1219
Bpu14I TTCGAA 1 cut(s) 371
BpuMI CCSGG 5 cut(s) 775, 1005, 1006, 1046, 1277
BsaHI GRCGYC 2 cut(s) 123, 406
BsaI GGTCTC 3 cut(s) 698, 918, 1454
BsaWI WCCGGW 5 cut(s) 232, 586, 728, 1012, 1291
BsaXI ACNNNNNCTCC 4 cut(s) 219, 249, 785, 815
Bsc4I CCNNNNNNNGG 9 cut(s) 72, 274, 464, 517, 728, 768, 1005, 1069, 1087
Bse3DI GCAATG 1 cut(s) 983
BseAI TCCGGA 2 cut(s) 728, 1012
BseGI GGATG 2 cut(s) 783, 1081
BseLI CCNNNNNNNGG 9 cut(s) 72, 274, 464, 517, 728, 768, 1005, 1069, 1087
BseMI GCAATG 1 cut(s) 983
BsePI GCGCGC 2 cut(s) 59, 61
BseRI GAGGAG 3 cut(s) 240, 567, 1448
BseSI GKGCMC 2 cut(s) 260, 1106
BseX3I CGGCCG 1 cut(s) 19
BseXI GCAGC 2 cut(s) 1194, 1294
Bsh1236I CGCG 8 cut(s) 24, 59, 61, 63, 128, 933, 1021, 1361
Bsh1285I CGRYCG 2 cut(s) 22, 273
BshFI GGCC 5 cut(s) 21, 1080, 1104, 1113, 1355
BshNI GGYRCC 3 cut(s) 122, 255, 707
BsiEI CGRYCG 2 cut(s) 22, 273
BsiHKCI CYCGRG 6 cut(s) 114, 198, 222, 753, 1004, 1081
BslFI GGGAC 3 cut(s) 784, 857, 1320
BslI CCNNNNNNNGG 9 cut(s) 72, 274, 464, 517, 728, 768, 1005, 1069, 1087
BsmAI GTCTC 5 cut(s) 628, 698, 869, 918, 1454
BsmBI CGTCTC 1 cut(s) 869
BsmFI GGGAC 3 cut(s) 784, 857, 1320
BsmI GAATGC 1 cut(s) 1396
BsnI GGCC 5 cut(s) 21, 1080, 1104, 1113, 1355
Bso31I GGTCTC 3 cut(s) 698, 918, 1454
BsoBI CYCGRG 6 cut(s) 114, 198, 222, 753, 1004, 1081
Bsp119I TTCGAA 1 cut(s) 371
Bsp120I GGGCCC 1 cut(s) 1102
Bsp1286I GDGCHC 3 cut(s) 260, 525, 1106
Bsp13I TCCGGA 2 cut(s) 728, 1012
BspANI GGCC 5 cut(s) 21, 1080, 1104, 1113, 1355
BspEI TCCGGA 2 cut(s) 728, 1012
BspFNI CGCG 8 cut(s) 24, 59, 61, 63, 128, 933, 1021, 1361
BspMI ACCTGC 1 cut(s) 1137
BspPI GGATC 8 cut(s) 33, 46, 502, 611, 836, 990, 1056, 1267
BspQI GCTCTTC 1 cut(s) 1115
BspT104I TTCGAA 1 cut(s) 371
BspT107I GGYRCC 3 cut(s) 122, 255, 707
BspTNI GGTCTC 3 cut(s) 698, 918, 1454
BsrBI CCGCTC 2 cut(s) 338, 1438
BsrDI GCAATG 1 cut(s) 983
BssHII GCGCGC 2 cut(s) 59, 61
BssNI GRCGYC 2 cut(s) 123, 406
BssT1I CCWWGG 3 cut(s) 137, 163, 1189
Bst4CI ACNGT 2 cut(s) 529, 643
Bst6I CTCTTC 3 cut(s) 73, 836, 1115
BstACI GRCGYC 2 cut(s) 123, 406
BstBI TTCGAA 1 cut(s) 371
BstC8I GCNNGC 3 cut(s) 61, 63, 1115
BstDEI CTNAG 1 cut(s) 723
BstDSI CCRYGG 7 cut(s) 22, 46, 126, 251, 525, 642, 1107
BstEII GGTNACC 2 cut(s) 664, 757
BstF5I GGATG 2 cut(s) 783, 1081
BstFNI CGCG 8 cut(s) 24, 59, 61, 63, 128, 933, 1021, 1361
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 7 cut(s) 7, 61, 63, 65, 125, 935, 1021
BstMAI GTCTC 5 cut(s) 628, 698, 869, 918, 1454
BstMCI CGRYCG 2 cut(s) 22, 273
BstMWI GCNNNNNNNGC 5 cut(s) 93, 469, 1027, 1110, 1182
BstPI GGTNACC 2 cut(s) 664, 757
BstSCI CCNGG 5 cut(s) 773, 1003, 1004, 1044, 1275
BstSLI GKGCMC 2 cut(s) 260, 1106
BstUI CGCG 8 cut(s) 24, 59, 61, 63, 128, 933, 1021, 1361
BstV1I GCAGC 2 cut(s) 1194, 1294
BstX2I RGATCY 5 cut(s) 38, 494, 540, 995, 1048
BstYI RGATCY 5 cut(s) 38, 494, 540, 995, 1048
BstZI CGGCCG 1 cut(s) 19
BsuI GTATCC 1 cut(s) 1020
BsuRI GGCC 5 cut(s) 21, 1080, 1104, 1113, 1355
BtgI CCRYGG 7 cut(s) 22, 46, 126, 251, 525, 642, 1107
BtgZI GCGATG 2 cut(s) 293, 313
BtsCI GGATG 2 cut(s) 783, 1081
BveI ACCTGC 1 cut(s) 1137
Cac8I GCNNGC 3 cut(s) 61, 63, 1115
CfoI GCGC 7 cut(s) 7, 61, 63, 65, 125, 935, 1021
Cfr13I GGNCC 6 cut(s) 771, 1079, 1102, 1103, 1111, 1354
Cfr42I CCGCGG 2 cut(s) 25, 129
Cfr9I CCCGGG 1 cut(s) 1004
CseI GACGC 1 cut(s) 395
Csp6I GTAC 3 cut(s) 708, 820, 1289
CviAII CATG 3 cut(s) 8, 69, 1349
CviQI GTAC 3 cut(s) 708, 820, 1289
DdeI CTNAG 1 cut(s) 723
DinI GGCGCC 1 cut(s) 124
EaeI YGGCCR 1 cut(s) 19
EagI CGGCCG 1 cut(s) 19
Eam1104I CTCTTC 3 cut(s) 73, 836, 1115
EarI CTCTTC 3 cut(s) 73, 836, 1115
EclXI CGGCCG 1 cut(s) 19
Eco130I CCWWGG 3 cut(s) 137, 163, 1189
Eco24I GRGCYC 2 cut(s) 525, 1106
Eco31I GGTCTC 3 cut(s) 698, 918, 1454
Eco32I GATATC 1 cut(s) 1366
Eco47I GGWCC 1 cut(s) 771
Eco52I CGGCCG 1 cut(s) 19
Eco88I CYCGRG 6 cut(s) 114, 198, 222, 753, 1004, 1081
Eco91I GGTNACC 2 cut(s) 664, 757
EcoO109I RGGNCCY 4 cut(s) 771, 1102, 1103, 1354
EcoO65I GGTNACC 2 cut(s) 664, 757
EcoRV GATATC 1 cut(s) 1366
EcoT14I CCWWGG 3 cut(s) 137, 163, 1189
EcoT38I GRGCYC 2 cut(s) 525, 1106
EgeI GGCGCC 1 cut(s) 124
EheI GGCGCC 1 cut(s) 124
ErhI CCWWGG 3 cut(s) 137, 163, 1189
Esp3I CGTCTC 1 cut(s) 869
FaeI CATG 3 cut(s) 11, 72, 1352
FaiI YATR 7 cut(s) 9, 70, 415, 480, 740, 824, 1350
FaqI GGGAC 3 cut(s) 784, 857, 1320
FatI CATG 3 cut(s) 7, 68, 1348
FauI CCCGC 3 cut(s) 66, 883, 1014
FblI GTMKAC 2 cut(s) 805, 943
Fnu4HI GCNGC 7 cut(s) 22, 97, 126, 1063, 1183, 1186, 1283
FokI GGATG 2 cut(s) 790, 1088
FriOI GRGCYC 2 cut(s) 525, 1106
Fsp4HI GCNGC 7 cut(s) 22, 97, 126, 1063, 1183, 1186, 1283
FspBI CTAG 4 cut(s) 138, 186, 936, 1465
GlaI GCGC 7 cut(s) 6, 60, 62, 64, 124, 934, 1020
GluI GCNGC 7 cut(s) 22, 97, 126, 1063, 1183, 1186, 1283
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 5 cut(s) 21, 1080, 1104, 1113, 1355
HgaI GACGC 1 cut(s) 395
HhaI GCGC 7 cut(s) 7, 61, 63, 65, 125, 935, 1021
Hin1I GRCGYC 2 cut(s) 123, 406
Hin1II CATG 3 cut(s) 11, 72, 1352
Hin6I GCGC 7 cut(s) 5, 59, 61, 63, 123, 933, 1019
HinP1I GCGC 7 cut(s) 5, 59, 61, 63, 123, 933, 1019
HincII GTYRAC 1 cut(s) 806
HindII GTYRAC 1 cut(s) 806
HindIII AAGCTT 1 cut(s) 342
HinfI GANTC 4 cut(s) 133, 158, 387, 870
Hpy166II GTNNAC 2 cut(s) 806, 944
Hpy188I TCNGA 3 cut(s) 411, 869, 1258
Hpy8I GTNNAC 2 cut(s) 806, 944
Hpy99I CGWCG 2 cut(s) 478, 552
HpyAV CCTTC 2 cut(s) 98, 367
HpyCH4III ACNGT 2 cut(s) 529, 643
HpyCH4IV ACGT 1 cut(s) 365
HpyCH4V TGCA 6 cut(s) 298, 581, 718, 1131, 1301, 1381
HpyF10VI GCNNNNNNNGC 5 cut(s) 93, 469, 1027, 1110, 1182
HpyF3I CTNAG 1 cut(s) 723
HpySE526I ACGT 1 cut(s) 365
Hsp92I GRCGYC 2 cut(s) 123, 406
Hsp92II CATG 3 cut(s) 11, 72, 1352
HspAI GCGC 7 cut(s) 5, 59, 61, 63, 123, 933, 1019
KasI GGCGCC 1 cut(s) 122
KflI GGGWCCC 1 cut(s) 771
Kpn2I TCCGGA 2 cut(s) 728, 1012
KpnI GGTACC 1 cut(s) 711
KspI CCGCGG 2 cut(s) 25, 129
LguI GCTCTTC 1 cut(s) 1115
LmnI GCTCC 8 cut(s) 179, 335, 520, 554, 1173, 1208, 1279, 1435
Lsp1109I GCAGC 2 cut(s) 1194, 1294
LweI GCATC 4 cut(s) 307, 560, 1310, 1368
MaeI CTAG 4 cut(s) 138, 186, 936, 1465
MaeII ACGT 1 cut(s) 365
MaeIII GTNAC 5 cut(s) 356, 506, 664, 757, 883
MauBI CGCGCGCG 1 cut(s) 59
MbiI CCGCTC 2 cut(s) 338, 1438
MboII GAAGA 6 cut(s) 90, 210, 550, 853, 1005, 1132
MflI RGATCY 5 cut(s) 38, 494, 540, 995, 1048
MhlI GDGCHC 3 cut(s) 260, 525, 1106
MluCI AATT 3 cut(s) 319, 422, 609
Mly113I GGCGCC 1 cut(s) 123
MlyI GAGTC 1 cut(s) 879
MmeI TCCRAC 2 cut(s) 1151, 1236
MroI TCCGGA 2 cut(s) 728, 1012
MslI CAYNNNNRTG 2 cut(s) 303, 641
MspA1I CMGCKG 3 cut(s) 24, 128, 878
MspR9I CCNGG 5 cut(s) 775, 1005, 1006, 1046, 1277
Mva1269I GAATGC 1 cut(s) 1396
MvnI CGCG 8 cut(s) 24, 59, 61, 63, 128, 933, 1021, 1361
MwoI GCNNNNNNNGC 5 cut(s) 93, 469, 1027, 1110, 1182
NarI GGCGCC 1 cut(s) 123
NciI CCSGG 5 cut(s) 775, 1005, 1006, 1046, 1277
NlaIII CATG 3 cut(s) 11, 72, 1352
NmuCI GTSAC 4 cut(s) 356, 506, 664, 883
NspV TTCGAA 1 cut(s) 371
PaeR7I CTCGAG 1 cut(s) 222
PauI GCGCGC 2 cut(s) 59, 61
PciSI GCTCTTC 1 cut(s) 1115
PcsI WCGNNNNNNNCGW 1 cut(s) 377
PctI GAATGC 1 cut(s) 1396
PfeI GAWTC 3 cut(s) 133, 158, 387
PfoI TCCNGGA 1 cut(s) 1275
PkrI GCNGC 7 cut(s) 23, 98, 127, 1064, 1184, 1187, 1284
Ple19I CGATCG 1 cut(s) 273
PleI GAGTC 1 cut(s) 878
PluTI GGCGCC 1 cut(s) 126
PpsI GAGTC 1 cut(s) 878
PpuMI RGGWCCY 1 cut(s) 771
Psp5II RGGWCCY 1 cut(s) 771
PspEI GGTNACC 2 cut(s) 664, 757
PspOMI GGGCCC 1 cut(s) 1102
PspPI GGNCC 6 cut(s) 771, 1079, 1102, 1103, 1111, 1354
PspPPI RGGWCCY 1 cut(s) 771
PsuI RGATCY 5 cut(s) 38, 494, 540, 995, 1048
PteI GCGCGC 2 cut(s) 59, 61
PvuI CGATCG 1 cut(s) 273
RsaI GTAC 3 cut(s) 709, 821, 1290
RsaNI GTAC 3 cut(s) 708, 820, 1289
RseI CAYNNNNRTG 2 cut(s) 303, 641
SacII CCGCGG 2 cut(s) 25, 129
SalI GTCGAC 1 cut(s) 804
SapI GCTCTTC 1 cut(s) 1115
SatI GCNGC 7 cut(s) 22, 97, 126, 1063, 1183, 1186, 1283
Sau96I GGNCC 6 cut(s) 771, 1079, 1102, 1103, 1111, 1354
SchI GAGTC 1 cut(s) 879
ScrFI CCNGG 5 cut(s) 775, 1005, 1006, 1046, 1277
SduI GDGCHC 3 cut(s) 260, 525, 1106
SfaNI GCATC 4 cut(s) 307, 560, 1310, 1368
SfiI GGCCNNNNNGGCC 1 cut(s) 1110
SfoI GGCGCC 1 cut(s) 124
Sfr274I CTCGAG 1 cut(s) 222
Sfr303I CCGCGG 2 cut(s) 25, 129
SfuI TTCGAA 1 cut(s) 371
SgrBI CCGCGG 2 cut(s) 25, 129
SinI GGWCC 1 cut(s) 771
SlaI CTCGAG 1 cut(s) 222
SmaI CCCGGG 1 cut(s) 1006
SmiMI CAYNNNNRTG 2 cut(s) 303, 641
SmlI CTYRAG 1 cut(s) 222
SmoI CTYRAG 1 cut(s) 222
Sse9I AATT 3 cut(s) 319, 422, 609
SspDI GGCGCC 1 cut(s) 122
SspMI CTAG 4 cut(s) 138, 186, 936, 1465
StyD4I CCNGG 5 cut(s) 773, 1003, 1004, 1044, 1275
StyI CCWWGG 3 cut(s) 137, 163, 1189
TaaI ACNGT 2 cut(s) 529, 643
TaiI ACGT 1 cut(s) 368
TasI AATT 3 cut(s) 319, 422, 609
TauI GCSGC 5 cut(s) 24, 99, 128, 1065, 1188
TfiI GAWTC 3 cut(s) 133, 158, 387
TseFI GTSAC 4 cut(s) 356, 506, 664, 883
TseI GCWGC 2 cut(s) 1182, 1282
Tsp45I GTSAC 4 cut(s) 356, 506, 664, 883
TspGWI ACGGA 1 cut(s) 841
TspMI CCCGGG 1 cut(s) 1004
VpaK11BI GGWCC 1 cut(s) 771
XapI RAATTY 2 cut(s) 319, 422
XcmI CCANNNNNNNNNTGG 1 cut(s) 170
XhoI CTCGAG 1 cut(s) 222
XmaI CCCGGG 1 cut(s) 1004
XmaJI CCTAGG 1 cut(s) 137
XmiI GTMKAC 2 cut(s) 805, 943
XspI CTAG 4 cut(s) 138, 186, 936, 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.