RchiOBHm_Chr7g0242761

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000075
Physical Location & Seq
Reverse (-)
69086324 .. 69087135
812 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21756

Sequence Viewer

Length: 732 bp
ATGTTAGAGCAGTTGGATGCTATTTTTGGTGGCGATATCGGGGCTCCGGGGTCGCGAGACGTTATCACCGTCGATAGTGGTGAGGCCGAGGTGACAAGCCAAGCCGTTGGTGATGCAGTTCCAATGGTTGAGGTTACTGAGGCTCAGCCGGAGCCTGAGGCGGTGGACGTTGGGGGTGTTCCGGCTGTTGAAACAGAGGTCCAAGGCCAAGTTGGTGAGGTGGATGGGACTCGAGTGTCGAAGACCTGTGCCCGTACTGATGGAGCTGGGTCAAGGAAGAGAACTGCCTTGCAGCTTCGCCTTGGGAGTCCCCCAGTTGGTGTCGATGTCGACACTCATGGGGGCAAAAGATCTCGGGTTGATGGTGTCTCGCGCTCTAGGTCCTCGAGTGGGGGTTCGCGAGGTTCTCGTGATGAAGTGGTCGGGGGTCTCGCACGAACTCTGGGTGAGATTGGAGTGACCGACGGGGACCTGCTTCATATGGTAGCCGACTTGCGGAATTGTCATCGTGATCGTAGTCGGGTGAATGCTGAAGACCCTCGCTTGGGGTATCGGGAGGCTCAGGAGAGGTTGATGAGGGCTGTGAATATAAACTATCATGCTTCTGCCGAGTTGGTGGCTCATTTTGACCTGGAGATAGCCCATCTGCAAAGGGAGTTGAACGTCGAGCGGGAGAGGCGCGCGAGTTGCAGGGTGCGCTGGACCGTGGTCAAGCAGAGCATCAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

243

Amino Acids

26.11

Weight (kDa)

5.76

Isoelectric Point (pI)

49.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 235
Acc36I ACCTGC 1 cut(s) 480
AccBSI CCGCTC 1 cut(s) 670
AccI GTMKAC 1 cut(s) 330
AccII CGCG 5 cut(s) 55, 373, 400, 681, 683
AciI CCGC 3 cut(s) 161, 496, 670
AcuI CTGAAG 1 cut(s) 552
AfaI GTAC 1 cut(s) 256
AfiI CCNNNNNNNGG 5 cut(s) 317, 390, 495, 544, 545
AgsI TTSAA 2 cut(s) 191, 661
AjnI CCWGG 1 cut(s) 630
AluBI AGCT 2 cut(s) 266, 295
AluI AGCT 2 cut(s) 266, 295
Alw26I GTCTC 3 cut(s) 51, 373, 434
Ama87I CYCGRG 3 cut(s) 231, 354, 385
AoxI GGCC 2 cut(s) 84, 205
ApeKI GCWGC 1 cut(s) 292
AspLEI GCGC 4 cut(s) 375, 681, 683, 699
AspS9I GGNCC 4 cut(s) 199, 381, 469, 702
AsuC2I CCSGG 1 cut(s) 48
AsuHPI GGTGA 7 cut(s) 58, 92, 103, 122, 227, 458, 535
AvaI CYCGRG 3 cut(s) 231, 354, 385
AvaII GGWCC 4 cut(s) 199, 381, 469, 702
AxyI CCTNAGG 1 cut(s) 156
BaeGI GKGCMC 1 cut(s) 253
BanII GRGCYC 1 cut(s) 46
BauI CACGAG 1 cut(s) 408
BbsI GAAGAC 2 cut(s) 248, 540
BbvI GCAGC 1 cut(s) 304
BccI CCATC 4 cut(s) 218, 254, 356, 651
BceAI ACGGC 1 cut(s) 89
BciT130I CCWGG 1 cut(s) 632
BcnI CCSGG 1 cut(s) 48
BcoDI GTCTC 3 cut(s) 51, 373, 434
BfaI CTAG 1 cut(s) 378
BfuAI ACCTGC 1 cut(s) 480
BglII AGATCT 1 cut(s) 350
BisI GCNGC 1 cut(s) 293
BlpI GCTNAGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 294
Bme1390I CCNGG 2 cut(s) 48, 632
Bme18I GGWCC 4 cut(s) 199, 381, 469, 702
BmeT110I CYCGRG 3 cut(s) 231, 354, 385
BmgT120I GGNCC 4 cut(s) 199, 381, 469, 702
BmiI GGNNCC 3 cut(s) 45, 153, 470
BmrFI CCNGG 2 cut(s) 48, 632
BmrI ACTGGG 1 cut(s) 308
BmsI GCATC 2 cut(s) 7, 103
BmuI ACTGGG 1 cut(s) 308
BoxI GACNNNNGTC 1 cut(s) 707
BpiI GAAGAC 2 cut(s) 248, 540
BpmI CTGGAG 1 cut(s) 653
Bpu10I CCTNAGC 1 cut(s) 561
Bpu1102I GCTNAGC 1 cut(s) 144
BpuMI CCSGG 1 cut(s) 48
BsaI GGTCTC 1 cut(s) 434
BsaJI CCNNGG 5 cut(s) 47, 87, 202, 301, 705
Bsc4I CCNNNNNNNGG 5 cut(s) 317, 390, 495, 544, 545
Bse1I ACTGG 1 cut(s) 314
Bse21I CCTNAGG 1 cut(s) 156
BseBI CCWGG 1 cut(s) 632
BseDI CCNNGG 5 cut(s) 47, 87, 202, 301, 705
BseGI GGATG 2 cut(s) 22, 229
BseLI CCNNNNNNNGG 5 cut(s) 317, 390, 495, 544, 545
BseMII CTCAG 4 cut(s) 129, 147, 158, 575
BseNI ACTGG 1 cut(s) 314
BsePI GCGCGC 1 cut(s) 679
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 1 cut(s) 304
BseYI CCCAGC 1 cut(s) 266
Bsh1236I CGCG 5 cut(s) 55, 373, 400, 681, 683
BshFI GGCC 2 cut(s) 86, 207
BsiHKCI CYCGRG 3 cut(s) 231, 354, 385
BsiSI CCGG 3 cut(s) 47, 149, 182
BslFI GGGAC 3 cut(s) 241, 294, 482
BslI CCNNNNNNNGG 5 cut(s) 317, 390, 495, 544, 545
BsmAI GTCTC 3 cut(s) 51, 373, 434
BsmBI CGTCTC 1 cut(s) 51
BsmFI GGGAC 3 cut(s) 241, 294, 482
BsmI GAATGC 1 cut(s) 532
BsnI GGCC 2 cut(s) 86, 207
Bso31I GGTCTC 1 cut(s) 434
BsoBI CYCGRG 3 cut(s) 231, 354, 385
Bsp1286I GDGCHC 2 cut(s) 46, 253
Bsp143I GATC 2 cut(s) 350, 511
Bsp1720I GCTNAGC 1 cut(s) 144
Bsp68I TCGCGA 2 cut(s) 55, 400
BspACI CCGC 3 cut(s) 161, 496, 670
BspANI GGCC 2 cut(s) 86, 207
BspCNI CTCAG 4 cut(s) 130, 148, 157, 574
BspFNI CGCG 5 cut(s) 55, 373, 400, 681, 683
BspLI GGNNCC 3 cut(s) 45, 153, 470
BspMI ACCTGC 1 cut(s) 480
BspTNI GGTCTC 1 cut(s) 434
BsrBI CCGCTC 1 cut(s) 670
BsrI ACTGG 1 cut(s) 314
BssECI CCNNGG 5 cut(s) 47, 87, 202, 301, 705
BssHII GCGCGC 1 cut(s) 679
BssMI GATC 2 cut(s) 350, 511
BssSI CACGAG 1 cut(s) 408
BssT1I CCWWGG 2 cut(s) 202, 301
Bst2BI CACGAG 1 cut(s) 408
Bst2UI CCWGG 1 cut(s) 632
Bst4CI ACNGT 2 cut(s) 70, 706
Bst6I CTCTTC 1 cut(s) 272
BstC8I GCNNGC 1 cut(s) 681
BstDEI CTNAG 4 cut(s) 138, 144, 156, 561
BstDSI CCRYGG 1 cut(s) 705
BstF5I GGATG 2 cut(s) 22, 229
BstFNI CGCG 5 cut(s) 55, 373, 400, 681, 683
BstHHI GCGC 4 cut(s) 375, 681, 683, 699
BstKTI GATC 2 cut(s) 353, 514
BstMAI GTCTC 3 cut(s) 51, 373, 434
BstMBI GATC 2 cut(s) 350, 511
BstMWI GCNNNNNNNGC 3 cut(s) 676, 687, 696
BstNI CCWGG 1 cut(s) 632
BstPAI GACNNNNGTC 1 cut(s) 707
BstSCI CCNGG 2 cut(s) 46, 630
BstSLI GKGCMC 1 cut(s) 253
BstUI CGCG 5 cut(s) 55, 373, 400, 681, 683
BstV1I GCAGC 1 cut(s) 304
BstV2I GAAGAC 2 cut(s) 248, 540
BstX2I RGATCY 1 cut(s) 350
BstXI CCANNNNNNTGG 1 cut(s) 107
BstYI RGATCY 1 cut(s) 350
Bsu36I CCTNAGG 1 cut(s) 156
BsuRI GGCC 2 cut(s) 86, 207
BtgI CCRYGG 1 cut(s) 705
BtsCI GGATG 2 cut(s) 22, 229
BtuMI TCGCGA 2 cut(s) 55, 400
BveI ACCTGC 1 cut(s) 480
Cac8I GCNNGC 1 cut(s) 681
CfoI GCGC 4 cut(s) 375, 681, 683, 699
Cfr13I GGNCC 4 cut(s) 199, 381, 469, 702
Csp6I GTAC 1 cut(s) 255
CviAII CATG 2 cut(s) 338, 599
CviQI GTAC 1 cut(s) 255
DdeI CTNAG 4 cut(s) 138, 144, 156, 561
DpnI GATC 2 cut(s) 352, 513
DpnII GATC 2 cut(s) 350, 511
DrdI GACNNNNNNGTC 1 cut(s) 235
DseDI GACNNNNNNGTC 1 cut(s) 235
Eam1104I CTCTTC 1 cut(s) 272
EarI CTCTTC 1 cut(s) 272
Eco130I CCWWGG 2 cut(s) 202, 301
Eco24I GRGCYC 1 cut(s) 46
Eco31I GGTCTC 1 cut(s) 434
Eco32I GATATC 1 cut(s) 37
Eco47I GGWCC 4 cut(s) 199, 381, 469, 702
Eco57I CTGAAG 1 cut(s) 552
Eco81I CCTNAGG 1 cut(s) 156
Eco88I CYCGRG 3 cut(s) 231, 354, 385
EcoO109I RGGNCCY 2 cut(s) 381, 469
EcoRII CCWGG 1 cut(s) 630
EcoRV GATATC 1 cut(s) 37
EcoT14I CCWWGG 2 cut(s) 202, 301
EcoT38I GRGCYC 1 cut(s) 46
ErhI CCWWGG 2 cut(s) 202, 301
Esp3I CGTCTC 1 cut(s) 51
FaeI CATG 2 cut(s) 341, 602
FaiI YATR 5 cut(s) 339, 480, 482, 590, 600
FaqI GGGAC 3 cut(s) 241, 294, 482
FatI CATG 2 cut(s) 337, 598
FauI CCCGC 1 cut(s) 663
FauNDI CATATG 1 cut(s) 480
FblI GTMKAC 1 cut(s) 330
Fnu4HI GCNGC 1 cut(s) 293
FokI GGATG 2 cut(s) 29, 236
FriOI GRGCYC 1 cut(s) 46
Fsp4HI GCNGC 1 cut(s) 293
FspBI CTAG 1 cut(s) 378
GlaI GCGC 4 cut(s) 374, 680, 682, 698
GluI GCNGC 1 cut(s) 293
GsaI CCCAGC 1 cut(s) 270
GsuI CTGGAG 1 cut(s) 653
HaeIII GGCC 2 cut(s) 86, 207
HapII CCGG 3 cut(s) 47, 149, 182
HhaI GCGC 4 cut(s) 375, 681, 683, 699
Hin1II CATG 2 cut(s) 341, 602
Hin6I GCGC 4 cut(s) 373, 679, 681, 697
HinP1I GCGC 4 cut(s) 373, 679, 681, 697
HincII GTYRAC 1 cut(s) 331
HindII GTYRAC 1 cut(s) 331
HinfI GANTC 2 cut(s) 229, 307
HpaII CCGG 3 cut(s) 47, 149, 182
HphI GGTGA 7 cut(s) 58, 92, 103, 122, 227, 458, 535
Hpy166II GTNNAC 2 cut(s) 166, 331
Hpy188III TCNNGA 7 cut(s) 54, 399, 410, 509, 554, 563, 724
Hpy8I GTNNAC 2 cut(s) 166, 331
Hpy99I CGWCG 3 cut(s) 74, 467, 668
HpyCH4III ACNGT 2 cut(s) 70, 706
HpyCH4IV ACGT 3 cut(s) 60, 168, 663
HpyCH4V TGCA 4 cut(s) 116, 292, 649, 690
HpyF10VI GCNNNNNNNGC 3 cut(s) 676, 687, 696
HpyF3I CTNAG 4 cut(s) 138, 144, 156, 561
HpySE526I ACGT 3 cut(s) 60, 168, 663
Hsp92II CATG 2 cut(s) 341, 602
HspAI GCGC 4 cut(s) 373, 679, 681, 697
Kzo9I GATC 2 cut(s) 350, 511
LmnI GCTCC 3 cut(s) 49, 151, 263
Lsp1109I GCAGC 1 cut(s) 304
LweI GCATC 2 cut(s) 7, 103
MaeI CTAG 1 cut(s) 378
MaeII ACGT 3 cut(s) 60, 168, 663
MaeIII GTNAC 3 cut(s) 91, 133, 457
MalI GATC 2 cut(s) 352, 513
MbiI CCGCTC 1 cut(s) 670
MboI GATC 2 cut(s) 350, 511
MboII GAAGA 3 cut(s) 253, 289, 545
MflI RGATCY 1 cut(s) 350
MhlI GDGCHC 2 cut(s) 46, 253
MluCI AATT 1 cut(s) 499
MlyI GAGTC 2 cut(s) 223, 316
MspI CCGG 3 cut(s) 47, 149, 182
MspR9I CCNGG 2 cut(s) 48, 632
Mva1269I GAATGC 1 cut(s) 532
MvaI CCWGG 1 cut(s) 632
MvnI CGCG 5 cut(s) 55, 373, 400, 681, 683
MwoI GCNNNNNNNGC 3 cut(s) 676, 687, 696
NciI CCSGG 1 cut(s) 48
NdeI CATATG 1 cut(s) 480
NdeII GATC 2 cut(s) 350, 511
NlaIII CATG 2 cut(s) 341, 602
NlaIV GGNNCC 3 cut(s) 45, 153, 470
NmeAIII GCCGAG 2 cut(s) 112, 634
NmuCI GTSAC 2 cut(s) 91, 457
NruI TCGCGA 2 cut(s) 55, 400
PaeR7I CTCGAG 2 cut(s) 231, 385
PauI GCGCGC 1 cut(s) 679
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PctI GAATGC 1 cut(s) 532
PkrI GCNGC 1 cut(s) 294
PleI GAGTC 2 cut(s) 223, 315
PpsI GAGTC 2 cut(s) 223, 315
PpuMI RGGWCCY 2 cut(s) 381, 469
PshAI GACNNNNGTC 1 cut(s) 707
Psp5II RGGWCCY 2 cut(s) 381, 469
Psp6I CCWGG 1 cut(s) 630
PspFI CCCAGC 1 cut(s) 266
PspGI CCWGG 1 cut(s) 630
PspN4I GGNNCC 3 cut(s) 45, 153, 470
PspPI GGNCC 4 cut(s) 199, 381, 469, 702
PspPPI RGGWCCY 2 cut(s) 381, 469
PspXI VCTCGAGB 2 cut(s) 231, 385
PsuI RGATCY 1 cut(s) 350
PteI GCGCGC 1 cut(s) 679
RruI TCGCGA 2 cut(s) 55, 400
RsaI GTAC 1 cut(s) 256
RsaNI GTAC 1 cut(s) 255
SalI GTCGAC 1 cut(s) 329
SatI GCNGC 1 cut(s) 293
Sau3AI GATC 2 cut(s) 350, 511
Sau96I GGNCC 4 cut(s) 199, 381, 469, 702
SchI GAGTC 2 cut(s) 223, 316
ScrFI CCNGG 2 cut(s) 48, 632
SduI GDGCHC 2 cut(s) 46, 253
SfaNI GCATC 2 cut(s) 7, 103
Sfr274I CTCGAG 2 cut(s) 231, 385
SinI GGWCC 4 cut(s) 199, 381, 469, 702
SlaI CTCGAG 2 cut(s) 231, 385
SmlI CTYRAG 2 cut(s) 231, 385
SmoI CTYRAG 2 cut(s) 231, 385
Sse9I AATT 1 cut(s) 499
SsiI CCGC 3 cut(s) 161, 496, 670
SspMI CTAG 1 cut(s) 378
StyD4I CCNGG 2 cut(s) 46, 630
StyI CCWWGG 2 cut(s) 202, 301
TaaI ACNGT 2 cut(s) 70, 706
TaiI ACGT 3 cut(s) 63, 171, 666
TaqI TCGA 7 cut(s) 72, 232, 239, 324, 330, 386, 666
TaqII GACCGA 1 cut(s) 476
TasI AATT 1 cut(s) 499
TseFI GTSAC 2 cut(s) 91, 457
TseI GCWGC 1 cut(s) 292
Tsp45I GTSAC 2 cut(s) 91, 457
TspDTI ATGAA 2 cut(s) 429, 467
VpaK11BI GGWCC 4 cut(s) 199, 381, 469, 702
XcmI CCANNNNNNNNNTGG 1 cut(s) 209
XhoI CTCGAG 2 cut(s) 231, 385
XmiI GTMKAC 1 cut(s) 330
XspI CTAG 1 cut(s) 378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.