Rmu_sc0003748.1_g000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003748.1
OG0000075
Physical Location & Seq
Forward (+)
54175 .. 55724
1550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003748.1_g000020.1.cds

Sequence Viewer

Length: 1176 bp
atggccgcggccgaggctggtggtaagcagcgaggccccgaagagggtggacatgatgaagaagagaattgcctcatagctccgtctcgagagtccccccgtgcgtgtgagtatcgatactcatggggaaagaggcccctagttgaggaggtggcacattcgagatctgcgagtgaaggttctcgctactctcgatacaaggttgtcggagggctctcgcagactctgggtgagattggcattgtcgatggtgcgattgtgcatatggtggcggatctgtgtaattgccatcgcaatcgtggtcgtgttaaagtggatgatcctctccaggggtatcgagatgctcaagagtggttgataagggtgacgtctaccgagttatttgcacacttagatcaagagatcgagagtctccaaggtgagttggacgccgagagggggcgagcacgtgagctccagggtctattcaatcttggacaggttgatcaggaagagatgcgtcaggcaattgatgatgggattgggaggaggatggagttggagcgatcattggtggtagaggagtctcggtggcgggaggctgaggagattgttgcccccttaagggaatcgaatttggacctaactggcaagttgcagcggaccaaggattgcgatgccgagttggagcttcgtagggttgccctagagagtttggctccctatcccgatagcatggttaagttggaggggcaactaggtgctttgcaaagagaggttgaccgtctgaaggttgttgagcgccaagctggcgagaagaatgctgagttagagcgattaaggaaggagcgagacggtaaggccaaggccgtcgatcattatcttttgtcgtccaacttccaagagaagataaacaaggccttctcggatggagccttacattcaattcgcgacagtatcaccgctagatggattaacctaaacaagatggtctacaagatgcaagtgaagaaggcagcgagatcgcaggccagcctggcgagtagaggttgcgggggagggatcgttatcctagaaccgttagttgtcacagagggtagcgcgagacaagtcggggaccacgaggctgggagtgctctcatgagcgagcatggagaaacgtgtgtggtgggtgctgaggtggcaccgaaaggctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

391

Amino Acids

43.37

Weight (kDa)

5.52

Isoelectric Point (pI)

48.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 371
AccB1I GGYRCC 1 cut(s) 1162
AccI GTMKAC 2 cut(s) 371, 972
AccII CGCG 3 cut(s) 8, 930, 1082
AciI CCGC 7 cut(s) 6, 8, 272, 574, 640, 942, 1032
AclWI GGATC 3 cut(s) 282, 314, 1049
AcoI YGGCCR 2 cut(s) 3, 9
AcsI RAATTY 1 cut(s) 613
AcuI CTGAAG 1 cut(s) 788
AcvI CACGTG 1 cut(s) 449
AcyI GRCGYC 2 cut(s) 368, 429
AfiI CCNNNNNNNGG 9 cut(s) 43, 44, 145, 329, 438, 603, 604, 769, 948
AflII CTTAAG 1 cut(s) 601
AflIII ACRYGT 1 cut(s) 1139
AgsI TTSAA 2 cut(s) 469, 924
AjnI CCWGG 3 cut(s) 327, 456, 1014
AluBI AGCT 4 cut(s) 80, 454, 670, 788
AluI AGCT 4 cut(s) 80, 454, 670, 788
Alw21I GWGCWC 3 cut(s) 448, 456, 1117
Alw26I GTCTC 5 cut(s) 90, 416, 570, 825, 1078
AlwI GGATC 3 cut(s) 282, 314, 1049
AlwNI CAGNNNCTG 1 cut(s) 226
Ama87I CYCGRG 1 cut(s) 87
AoxI GGCC 8 cut(s) 3, 9, 34, 134, 840, 846, 897, 1008
ApeKI GCWGC 3 cut(s) 28, 637, 995
ApoI RAATTY 1 cut(s) 613
AspLEI GCGC 2 cut(s) 783, 1082
AspS9I GGNCC 5 cut(s) 35, 135, 619, 642, 1096
AsuHPI GGTGA 4 cut(s) 242, 376, 431, 931
AvaI CYCGRG 1 cut(s) 87
AvaII GGWCC 3 cut(s) 619, 642, 1096
BanI GGYRCC 1 cut(s) 1162
BanII GRGCYC 2 cut(s) 216, 456
BauI CACGAG 1 cut(s) 1100
BbrPI CACGTG 1 cut(s) 449
Bbv12I GWGCWC 3 cut(s) 448, 456, 1117
BbvCI CCTCAGC 2 cut(s) 582, 1155
BbvI GCAGC 3 cut(s) 40, 649, 1007
BccI CCATC 7 cut(s) 242, 297, 509, 526, 902, 942, 961
BceAI ACGGC 1 cut(s) 833
BcgI CGANNNNNNTGC 6 cut(s) 365, 399, 782, 816, 984, 1018
BciT130I CCWGG 3 cut(s) 329, 458, 1016
BclI TGATCA 1 cut(s) 484
BcoDI GTCTC 5 cut(s) 90, 416, 570, 825, 1078
BfaI CTAG 6 cut(s) 140, 686, 737, 945, 1052, 1174
BfoI RGCGCY 1 cut(s) 784
BfrI CTTAAG 1 cut(s) 601
BglI GCCNNNNNGGC 2 cut(s) 789, 1016
BglII AGATCT 1 cut(s) 164
BisI GCNGC 5 cut(s) 6, 9, 29, 638, 996
BlsI GCNGC 5 cut(s) 7, 10, 30, 639, 997
Bme1390I CCNGG 3 cut(s) 329, 458, 1016
Bme18I GGWCC 3 cut(s) 619, 642, 1096
BmeT110I CYCGRG 1 cut(s) 87
BmgT120I GGNCC 5 cut(s) 35, 135, 619, 642, 1096
BmiI GGNNCC 6 cut(s) 37, 137, 699, 913, 1097, 1164
BmrFI CCNGG 3 cut(s) 329, 458, 1016
BmsI GCATC 4 cut(s) 331, 486, 646, 969
BplI GAGNNNNNCTC 2 cut(s) 682, 714
BpmI CTGGAG 2 cut(s) 311, 440
Bpu10I CCTNAGC 2 cut(s) 582, 1155
BpuEI CTTGAG 1 cut(s) 330
Bsa29I ATCGAT 1 cut(s) 115
BsaAI YACGTR 1 cut(s) 449
BsaBI GATNNNNATC 2 cut(s) 858, 1046
BsaHI GRCGYC 2 cut(s) 368, 429
BsaJI CCNNGG 7 cut(s) 6, 12, 328, 415, 457, 645, 843
BsaXI ACNNNNNCTCC 6 cut(s) 438, 468, 554, 584, 1029, 1059
Bsc4I CCNNNNNNNGG 9 cut(s) 43, 44, 145, 329, 438, 603, 604, 769, 948
Bse1I ACTGG 1 cut(s) 631
Bse8I GATNNNNATC 2 cut(s) 858, 1046
BseBI CCWGG 3 cut(s) 329, 458, 1016
BseCI ATCGAT 1 cut(s) 115
BseDI CCNNGG 7 cut(s) 6, 12, 328, 415, 457, 645, 843
BseGI GGATG 3 cut(s) 322, 537, 913
BseJI GATNNNNATC 2 cut(s) 858, 1046
BseLI CCNNNNNNNGG 9 cut(s) 43, 44, 145, 329, 438, 603, 604, 769, 948
BseMII CTCAG 3 cut(s) 573, 795, 1146
BseNI ACTGG 1 cut(s) 631
BseRI GAGGAG 4 cut(s) 161, 541, 575, 599
BseX3I CGGCCG 1 cut(s) 9
BseXI GCAGC 3 cut(s) 40, 649, 1007
BseYI CCCAGC 1 cut(s) 1106
Bsh1236I CGCG 3 cut(s) 8, 930, 1082
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 8 cut(s) 5, 11, 36, 136, 842, 848, 899, 1010
BshNI GGYRCC 1 cut(s) 1162
BshVI ATCGAT 1 cut(s) 115
BsiEI CGRYCG 1 cut(s) 12
BsiHKAI GWGCWC 3 cut(s) 448, 456, 1117
BsiHKCI CYCGRG 1 cut(s) 87
BslFI GGGAC 2 cut(s) 79, 1109
BslI CCNNNNNNNGG 9 cut(s) 43, 44, 145, 329, 438, 603, 604, 769, 948
BsmAI GTCTC 5 cut(s) 90, 416, 570, 825, 1078
BsmBI CGTCTC 2 cut(s) 90, 825
BsmFI GGGAC 2 cut(s) 79, 1109
BsmI GAATGC 1 cut(s) 805
BsnI GGCC 8 cut(s) 5, 11, 36, 136, 842, 848, 899, 1010
BsoBI CYCGRG 1 cut(s) 87
Bsp1286I GDGCHC 4 cut(s) 216, 448, 456, 1117
Bsp68I TCGCGA 1 cut(s) 930
BspACI CCGC 7 cut(s) 6, 8, 272, 574, 640, 942, 1032
BspANI GGCC 8 cut(s) 5, 11, 36, 136, 842, 848, 899, 1010
BspCNI CTCAG 3 cut(s) 574, 796, 1147
BspDI ATCGAT 1 cut(s) 115
BspFNI CGCG 3 cut(s) 8, 930, 1082
BspHI TCATGA 1 cut(s) 1119
BspLI GGNNCC 6 cut(s) 37, 137, 699, 913, 1097, 1164
BspPI GGATC 3 cut(s) 282, 314, 1049
BspT107I GGYRCC 1 cut(s) 1162
BspTI CTTAAG 1 cut(s) 601
BsrI ACTGG 1 cut(s) 631
BssECI CCNNGG 7 cut(s) 6, 12, 328, 415, 457, 645, 843
BssNI GRCGYC 2 cut(s) 368, 429
BssSI CACGAG 1 cut(s) 1100
BssT1I CCWWGG 3 cut(s) 415, 645, 843
Bst2BI CACGAG 1 cut(s) 1100
Bst2UI CCWGG 3 cut(s) 329, 458, 1016
Bst4CI ACNGT 4 cut(s) 764, 836, 935, 1059
Bst6I CTCTTC 3 cut(s) 36, 57, 486
BstACI GRCGYC 2 cut(s) 368, 429
BstAFI CTTAAG 1 cut(s) 601
BstBAI YACGTR 1 cut(s) 449
BstC8I GCNNGC 5 cut(s) 444, 790, 1008, 1012, 1127
BstDEI CTNAG 4 cut(s) 391, 582, 804, 1155
BstDSI CCRYGG 1 cut(s) 6
BstENI CCTNNNNNAGG 1 cut(s) 143
BstF5I GGATG 3 cut(s) 322, 537, 913
BstFNI CGCG 3 cut(s) 8, 930, 1082
BstH2I RGCGCY 1 cut(s) 784
BstHHI GCGC 2 cut(s) 783, 1082
BstMAI GTCTC 5 cut(s) 90, 416, 570, 825, 1078
BstMCI CGRYCG 1 cut(s) 12
BstMWI GCNNNNNNNGC 5 cut(s) 14, 789, 1016, 1112, 1160
BstNI CCWGG 3 cut(s) 329, 458, 1016
BstSCI CCNGG 3 cut(s) 327, 456, 1014
BstUI CGCG 3 cut(s) 8, 930, 1082
BstV1I GCAGC 3 cut(s) 40, 649, 1007
BstX2I RGATCY 2 cut(s) 164, 274
BstXI CCANNNNNNTGG 1 cut(s) 1106
BstYI RGATCY 2 cut(s) 164, 274
BstZI CGGCCG 1 cut(s) 9
Bsu15I ATCGAT 1 cut(s) 115
BsuRI GGCC 8 cut(s) 5, 11, 36, 136, 842, 848, 899, 1010
BsuTUI ATCGAT 1 cut(s) 115
BtgI CCRYGG 1 cut(s) 6
BtgZI GCGATG 2 cut(s) 275, 669
BtsCI GGATG 3 cut(s) 322, 537, 913
BtuMI TCGCGA 1 cut(s) 930
Cac8I GCNNGC 5 cut(s) 444, 790, 1008, 1012, 1127
CaiI CAGNNNCTG 1 cut(s) 226
CciI TCATGA 1 cut(s) 1119
CfoI GCGC 2 cut(s) 783, 1082
Cfr13I GGNCC 5 cut(s) 35, 135, 619, 642, 1096
Cfr42I CCGCGG 1 cut(s) 9
ClaI ATCGAT 1 cut(s) 115
CseI GACGC 2 cut(s) 437, 488
CviAII CATG 5 cut(s) 53, 123, 715, 1120, 1130
DdeI CTNAG 4 cut(s) 391, 582, 804, 1155
EaeI YGGCCR 2 cut(s) 3, 9
EagI CGGCCG 1 cut(s) 9
Eam1104I CTCTTC 3 cut(s) 36, 57, 486
EarI CTCTTC 3 cut(s) 36, 57, 486
EciI GGCGGA 1 cut(s) 287
Ecl136II GAGCTC 1 cut(s) 454
EclXI CGGCCG 1 cut(s) 9
Eco130I CCWWGG 3 cut(s) 415, 645, 843
Eco147I AGGCCT 1 cut(s) 899
Eco24I GRGCYC 2 cut(s) 216, 456
Eco47I GGWCC 3 cut(s) 619, 642, 1096
Eco52I CGGCCG 1 cut(s) 9
Eco53kI GAGCTC 1 cut(s) 454
Eco57I CTGAAG 1 cut(s) 788
Eco72I CACGTG 1 cut(s) 449
Eco88I CYCGRG 1 cut(s) 87
EcoICRI GAGCTC 1 cut(s) 454
EcoNI CCTNNNNNAGG 1 cut(s) 143
EcoO109I RGGNCCY 2 cut(s) 35, 135
EcoRII CCWGG 3 cut(s) 327, 456, 1014
EcoT14I CCWWGG 3 cut(s) 415, 645, 843
EcoT38I GRGCYC 2 cut(s) 216, 456
ErhI CCWWGG 3 cut(s) 415, 645, 843
Esp3I CGTCTC 2 cut(s) 90, 825
FaeI CATG 5 cut(s) 56, 126, 718, 1123, 1133
FaiI YATR 8 cut(s) 54, 77, 124, 264, 266, 716, 1121, 1131
FaqI GGGAC 2 cut(s) 79, 1109
FatI CATG 5 cut(s) 52, 122, 714, 1119, 1129
FauI CCCGC 2 cut(s) 567, 1025
FauNDI CATATG 1 cut(s) 264
FbaI TGATCA 1 cut(s) 484
FblI GTMKAC 2 cut(s) 371, 972
Fnu4HI GCNGC 5 cut(s) 6, 9, 29, 638, 996
FokI GGATG 3 cut(s) 329, 544, 920
FriOI GRGCYC 2 cut(s) 216, 456
Fsp4HI GCNGC 5 cut(s) 6, 9, 29, 638, 996
FspBI CTAG 6 cut(s) 140, 686, 737, 945, 1052, 1174
GlaI GCGC 2 cut(s) 782, 1081
GluI GCNGC 5 cut(s) 6, 9, 29, 638, 996
GsaI CCCAGC 1 cut(s) 1110
GsuI CTGGAG 2 cut(s) 311, 440
HaeII RGCGCY 1 cut(s) 784
HaeIII GGCC 8 cut(s) 5, 11, 36, 136, 842, 848, 899, 1010
HgaI GACGC 2 cut(s) 437, 488
HhaI GCGC 2 cut(s) 783, 1082
Hin1I GRCGYC 2 cut(s) 368, 429
Hin1II CATG 5 cut(s) 56, 126, 718, 1123, 1133
Hin6I GCGC 2 cut(s) 781, 1080
HinP1I GCGC 2 cut(s) 781, 1080
HincII GTYRAC 1 cut(s) 760
HindII GTYRAC 1 cut(s) 760
HinfI GANTC 5 cut(s) 92, 223, 409, 563, 608
HphI GGTGA 4 cut(s) 242, 376, 431, 931
Hpy166II GTNNAC 4 cut(s) 50, 372, 760, 973
Hpy188I TCNGA 3 cut(s) 209, 768, 907
Hpy8I GTNNAC 4 cut(s) 50, 372, 760, 973
Hpy99I CGWCG 1 cut(s) 854
HpyAV CCTTC 5 cut(s) 170, 763, 817, 910, 985
HpyCH4III ACNGT 4 cut(s) 764, 836, 935, 1059
HpyCH4IV ACGT 3 cut(s) 368, 448, 1139
HpyCH4V TGCA 5 cut(s) 262, 386, 637, 748, 982
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 789, 1016, 1112, 1160
HpyF3I CTNAG 4 cut(s) 391, 582, 804, 1155
HpySE526I ACGT 3 cut(s) 368, 448, 1139
Hsp92I GRCGYC 2 cut(s) 368, 429
Hsp92II CATG 5 cut(s) 56, 126, 718, 1123, 1133
HspAI GCGC 2 cut(s) 781, 1080
Ksp22I TGATCA 1 cut(s) 484
KspI CCGCGG 1 cut(s) 9
LmnI GCTCC 7 cut(s) 85, 459, 541, 667, 703, 826, 911
Lsp1109I GCAGC 3 cut(s) 40, 649, 1007
LweI GCATC 4 cut(s) 331, 486, 646, 969
MaeI CTAG 6 cut(s) 140, 686, 737, 945, 1052, 1174
MaeII ACGT 3 cut(s) 368, 448, 1139
MaeIII GTNAC 2 cut(s) 364, 1066
MboII GAAGA 7 cut(s) 53, 71, 74, 503, 808, 898, 1000
MfeI CAATTG 1 cut(s) 507
MflI RGATCY 2 cut(s) 164, 274
MhlI GDGCHC 4 cut(s) 216, 448, 456, 1117
MluCI AATT 5 cut(s) 67, 283, 507, 613, 924
MlyI GAGTC 4 cut(s) 101, 217, 418, 572
MmeI TCCRAC 6 cut(s) 187, 405, 519, 645, 705, 897
MseI TTAA 5 cut(s) 309, 602, 720, 818, 954
MspA1I CMGCKG 2 cut(s) 8, 640
MspCI CTTAAG 1 cut(s) 601
MspR9I CCNGG 3 cut(s) 329, 458, 1016
MunI CAATTG 1 cut(s) 507
Mva1269I GAATGC 1 cut(s) 805
MvaI CCWGG 3 cut(s) 329, 458, 1016
MvnI CGCG 3 cut(s) 8, 930, 1082
MwoI GCNNNNNNNGC 5 cut(s) 14, 789, 1016, 1112, 1160
NdeI CATATG 1 cut(s) 264
NlaIII CATG 5 cut(s) 56, 126, 718, 1123, 1133
NlaIV GGNNCC 6 cut(s) 37, 137, 699, 913, 1097, 1164
NmeAIII GCCGAG 3 cut(s) 37, 457, 685
NmuCI GTSAC 2 cut(s) 364, 1066
NruI TCGCGA 1 cut(s) 930
PaeR7I CTCGAG 1 cut(s) 87
PagI TCATGA 1 cut(s) 1119
PceI AGGCCT 1 cut(s) 899
PcsI WCGNNNNNNNCGW 3 cut(s) 167, 190, 1098
PctI GAATGC 1 cut(s) 805
PfeI GAWTC 1 cut(s) 608
PkrI GCNGC 5 cut(s) 7, 10, 30, 639, 997
PleI GAGTC 4 cut(s) 100, 217, 417, 571
PmaCI CACGTG 1 cut(s) 449
PmlI CACGTG 1 cut(s) 449
PpsI GAGTC 4 cut(s) 100, 217, 417, 571
Ppu21I YACGTR 1 cut(s) 449
Psp124BI GAGCTC 1 cut(s) 456
Psp6I CCWGG 3 cut(s) 327, 456, 1014
PspCI CACGTG 1 cut(s) 449
PspFI CCCAGC 1 cut(s) 1106
PspGI CCWGG 3 cut(s) 327, 456, 1014
PspN4I GGNNCC 6 cut(s) 37, 137, 699, 913, 1097, 1164
PspPI GGNCC 5 cut(s) 35, 135, 619, 642, 1096
PstNI CAGNNNCTG 1 cut(s) 226
PsuI RGATCY 2 cut(s) 164, 274
RruI TCGCGA 1 cut(s) 930
SacI GAGCTC 1 cut(s) 456
SacII CCGCGG 1 cut(s) 9
SaqAI TTAA 5 cut(s) 309, 602, 720, 818, 954
SatI GCNGC 5 cut(s) 6, 9, 29, 638, 996
Sau96I GGNCC 5 cut(s) 35, 135, 619, 642, 1096
SchI GAGTC 4 cut(s) 101, 217, 418, 572
ScrFI CCNGG 3 cut(s) 329, 458, 1016
SduI GDGCHC 4 cut(s) 216, 448, 456, 1117
SfaNI GCATC 4 cut(s) 331, 486, 646, 969
Sfr274I CTCGAG 1 cut(s) 87
Sfr303I CCGCGG 1 cut(s) 9
SgrBI CCGCGG 1 cut(s) 9
SinI GGWCC 3 cut(s) 619, 642, 1096
SlaI CTCGAG 1 cut(s) 87
SmlI CTYRAG 3 cut(s) 87, 345, 601
SmoI CTYRAG 3 cut(s) 87, 345, 601
Sse9I AATT 5 cut(s) 67, 283, 507, 613, 924
SseBI AGGCCT 1 cut(s) 899
SsiI CCGC 7 cut(s) 6, 8, 272, 574, 640, 942, 1032
SspMI CTAG 6 cut(s) 140, 686, 737, 945, 1052, 1174
SstI GAGCTC 1 cut(s) 456
StuI AGGCCT 1 cut(s) 899
StyD4I CCNGG 3 cut(s) 327, 456, 1014
StyI CCWWGG 3 cut(s) 415, 645, 843
TaaI ACNGT 4 cut(s) 764, 836, 935, 1059
TaiI ACGT 3 cut(s) 371, 451, 1142
TaqI TCGA 9 cut(s) 88, 115, 161, 193, 246, 337, 405, 611, 852
TasI AATT 5 cut(s) 67, 283, 507, 613, 924
TauI GCSGC 2 cut(s) 8, 11
TfiI GAWTC 1 cut(s) 608
Tru1I TTAA 5 cut(s) 309, 602, 720, 818, 954
Tru9I TTAA 5 cut(s) 309, 602, 720, 818, 954
TseFI GTSAC 2 cut(s) 364, 1066
TseI GCWGC 3 cut(s) 28, 637, 995
Tsp45I GTSAC 2 cut(s) 364, 1066
TspDTI ATGAA 1 cut(s) 72
TspGWI ACGGA 1 cut(s) 72
Vha464I CTTAAG 1 cut(s) 601
VpaK11BI GGWCC 3 cut(s) 619, 642, 1096
XagI CCTNNNNNAGG 1 cut(s) 143
XapI RAATTY 1 cut(s) 613
XcmI CCANNNNNNNNNTGG 1 cut(s) 296
XhoI CTCGAG 1 cut(s) 87
XmiI GTMKAC 2 cut(s) 371, 972
XspI CTAG 6 cut(s) 140, 686, 737, 945, 1052, 1174
ZraI GACGTC 1 cut(s) 369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.