Rroxscaffold_1G00000570

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000075
Physical Location & Seq
Reverse (-)
1009174 .. 1010526
1353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00000570.1

Sequence Viewer

Length: 837 bp
ATGAGATGTATCCGAGGTTTCCCAATGCCGTGCCGGGAGTATTTCAATCAACGGGCCGAGGAAGAAGGCGGTGTTGAGAGGCATGAGGGTGGCGTTTCCGGGGAGCCGACTCGAGATGTCCGGGGCCGCCTACGCAAGATGGTAAGGCGAGTGAGTGCCCCCAACCGCATGGTGGCGATCGTCGGTCCCCGAGACTCGGGAGGTTCCCGAGGTACAACCGAGTTCGGAGAGGGTGTAATCGGGGTTGGCCCGATTATCGAGACAGGGACCCAAGATGGAGAGGGAGATAGAGTCCGAGTGTCGGACACGTGTGGTCGTACGGATGGGGTCGGGTCTAGGAAGAGGACGGCCTCGCGGCTTCTTCTTGAGAGTCCCCCGGTGGTGTTGCTATCGATACTCGCGGTAGTAAGAGGTCTCGGGTTGATAACTTGTCGCCTTCAAGATCTACAAGTAGGGGTTCCGGGGTTCTCGCGAAGAGGTCGCGGGGGTCTCGAACGCACCCTAGGCGAGATTGGGATTACCGATGGAGCCATCCTTCACATGGTTACCGACTTGCGAAACTATCATCATGATCGCGTTCGCGTGAGTGTCGAAGACCCACCTGCGGGGTATCGAGAAGCTCGGGAGAGGTTGATGAGGGTGGAGCACGAGGATATGAGGCGGGTAGTTGACAAACGGATCGTGATGAGGATGGAGCCGGAACGAGCACTTGCTATAGAGGAGGCTCGTCGTCAAGAGGCCGAGGATGCTATCGCTCCCTTGAGGGAGGCAAACCTCGATTTGACGGGAAGGCTGCGGCGGGTGGAGGATGGCCCGAAATTGGTAGAGCGAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

278

Amino Acids

30.9

Weight (kDa)

9.32

Isoelectric Point (pI)

48.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 610
Acc36I ACCTGC 1 cut(s) 610
AccII CGCG 6 cut(s) 355, 401, 472, 483, 576, 582
AclWI GGATC 1 cut(s) 686
AcvI CACGTG 1 cut(s) 309
AfaI GTAC 2 cut(s) 214, 319
AfiI CCNNNNNNNGG 7 cut(s) 172, 196, 301, 541, 604, 605, 820
AflIII ACRYGT 2 cut(s) 306, 308
AgsI TTSAA 2 cut(s) 46, 440
AluBI AGCT 1 cut(s) 620
AluI AGCT 1 cut(s) 620
Alw21I GWGCWC 2 cut(s) 648, 709
Alw26I GTCTC 4 cut(s) 186, 254, 419, 494
AlwI GGATC 1 cut(s) 686
Ama87I CYCGRG 6 cut(s) 111, 189, 196, 207, 416, 621
AoxI GGCC 6 cut(s) 54, 124, 247, 348, 738, 811
ApeKI GCWGC 1 cut(s) 793
AspA2I CCTAGG 1 cut(s) 502
AspS9I GGNCC 6 cut(s) 54, 124, 185, 248, 267, 812
AsuC2I CCSGG 5 cut(s) 35, 100, 122, 377, 462
AvaI CYCGRG 6 cut(s) 111, 189, 196, 207, 416, 621
AvaII GGWCC 2 cut(s) 185, 267
AvrII CCTAGG 1 cut(s) 502
BaeGI GKGCMC 1 cut(s) 160
BauI CACGAG 1 cut(s) 647
BbrPI CACGTG 1 cut(s) 309
BbsI GAAGAC 1 cut(s) 600
Bbv12I GWGCWC 2 cut(s) 648, 709
BbvI GCAGC 1 cut(s) 780
BccI CCATC 7 cut(s) 133, 269, 317, 518, 539, 685, 803
BceAI ACGGC 2 cut(s) 13, 363
BciVI GTATCC 1 cut(s) 20
BcnI CCSGG 5 cut(s) 35, 100, 122, 377, 462
BcoDI GTCTC 4 cut(s) 186, 254, 419, 494
BfaI CTAG 2 cut(s) 336, 503
BfmI CTRYAG 1 cut(s) 714
BfuAI ACCTGC 1 cut(s) 610
BfuI GTATCC 1 cut(s) 20
BglII AGATCT 1 cut(s) 442
BisI GCNGC 4 cut(s) 127, 356, 794, 797
BlnI CCTAGG 1 cut(s) 502
BlsI GCNGC 4 cut(s) 128, 357, 795, 798
Bme1390I CCNGG 5 cut(s) 35, 100, 122, 377, 462
Bme18I GGWCC 2 cut(s) 185, 267
BmeT110I CYCGRG 6 cut(s) 111, 189, 196, 207, 416, 621
BmgT120I GGNCC 6 cut(s) 54, 124, 185, 248, 267, 812
BmiI GGNNCC 9 cut(s) 105, 125, 187, 205, 268, 269, 459, 529, 696
BmrFI CCNGG 5 cut(s) 35, 100, 122, 377, 462
BmsI GCATC 1 cut(s) 736
BpiI GAAGAC 1 cut(s) 600
BpuEI CTTGAG 2 cut(s) 386, 781
BpuMI CCSGG 5 cut(s) 35, 100, 122, 377, 462
Bsa29I ATCGAT 1 cut(s) 392
BsaAI YACGTR 1 cut(s) 309
BsaI GGTCTC 2 cut(s) 419, 494
BsaJI CCNNGG 9 cut(s) 13, 57, 99, 121, 208, 375, 461, 502, 741
BsaXI ACNNNNNCTCC 4 cut(s) 219, 249, 276, 306
Bsc4I CCNNNNNNNGG 7 cut(s) 172, 196, 301, 541, 604, 605, 820
BseCI ATCGAT 1 cut(s) 392
BseDI CCNNGG 9 cut(s) 13, 57, 99, 121, 208, 375, 461, 502, 741
BseGI GGATG 5 cut(s) 328, 531, 696, 751, 814
BseLI CCNNNNNNNGG 7 cut(s) 172, 196, 301, 541, 604, 605, 820
BseRI GAGGAG 1 cut(s) 734
BseSI GKGCMC 1 cut(s) 160
BseXI GCAGC 1 cut(s) 780
Bsh1236I CGCG 6 cut(s) 355, 401, 472, 483, 576, 582
Bsh1285I CGRYCG 1 cut(s) 180
BshFI GGCC 6 cut(s) 56, 126, 249, 350, 740, 813
BshVI ATCGAT 1 cut(s) 392
BsiEI CGRYCG 1 cut(s) 180
BsiHKAI GWGCWC 2 cut(s) 648, 709
BsiHKCI CYCGRG 6 cut(s) 111, 189, 196, 207, 416, 621
BsiSI CCGG 6 cut(s) 34, 99, 121, 377, 461, 698
BsiWI CGTACG 1 cut(s) 317
BslFI GGGAC 3 cut(s) 171, 280, 357
BslI CCNNNNNNNGG 7 cut(s) 172, 196, 301, 541, 604, 605, 820
BsmAI GTCTC 4 cut(s) 186, 254, 419, 494
BsmFI GGGAC 3 cut(s) 171, 280, 357
BsnI GGCC 6 cut(s) 56, 126, 249, 350, 740, 813
Bso31I GGTCTC 2 cut(s) 419, 494
BsoBI CYCGRG 6 cut(s) 111, 189, 196, 207, 416, 621
Bsp1286I GDGCHC 3 cut(s) 160, 648, 709
Bsp143I GATC 4 cut(s) 177, 442, 571, 678
Bsp68I TCGCGA 1 cut(s) 472
BspANI GGCC 6 cut(s) 56, 126, 249, 350, 740, 813
BspDI ATCGAT 1 cut(s) 392
BspFNI CGCG 6 cut(s) 355, 401, 472, 483, 576, 582
BspHI TCATGA 1 cut(s) 568
BspLI GGNNCC 9 cut(s) 105, 125, 187, 205, 268, 269, 459, 529, 696
BspMI ACCTGC 1 cut(s) 610
BspPI GGATC 1 cut(s) 686
BspTNI GGTCTC 2 cut(s) 419, 494
BssECI CCNNGG 9 cut(s) 13, 57, 99, 121, 208, 375, 461, 502, 741
BssMI GATC 4 cut(s) 177, 442, 571, 678
BssSI CACGAG 1 cut(s) 647
BssT1I CCWWGG 1 cut(s) 502
Bst2BI CACGAG 1 cut(s) 647
Bst6I CTCTTC 2 cut(s) 335, 469
BstBAI YACGTR 1 cut(s) 309
BstEII GGTNACC 1 cut(s) 544
BstF5I GGATG 5 cut(s) 328, 531, 696, 751, 814
BstFNI CGCG 6 cut(s) 355, 401, 472, 483, 576, 582
BstKTI GATC 4 cut(s) 180, 445, 574, 681
BstMAI GTCTC 4 cut(s) 186, 254, 419, 494
BstMBI GATC 4 cut(s) 177, 442, 571, 678
BstMCI CGRYCG 1 cut(s) 180
BstMWI GCNNNNNNNGC 3 cut(s) 132, 504, 746
BstPI GGTNACC 1 cut(s) 544
BstSCI CCNGG 5 cut(s) 33, 98, 120, 375, 460
BstSFI CTRYAG 1 cut(s) 714
BstSLI GKGCMC 1 cut(s) 160
BstUI CGCG 6 cut(s) 355, 401, 472, 483, 576, 582
BstV1I GCAGC 1 cut(s) 780
BstV2I GAAGAC 1 cut(s) 600
BstX2I RGATCY 1 cut(s) 442
BstXI CCANNNNNNTGG 1 cut(s) 169
BstYI RGATCY 1 cut(s) 442
Bsu15I ATCGAT 1 cut(s) 392
BsuI GTATCC 1 cut(s) 20
BsuRI GGCC 6 cut(s) 56, 126, 249, 350, 740, 813
BsuTUI ATCGAT 1 cut(s) 392
BtsCI GGATG 5 cut(s) 328, 531, 696, 751, 814
BtuMI TCGCGA 1 cut(s) 472
BveI ACCTGC 1 cut(s) 610
CciI TCATGA 1 cut(s) 568
Cfr13I GGNCC 6 cut(s) 54, 124, 185, 248, 267, 812
ClaI ATCGAT 1 cut(s) 392
Csp6I GTAC 2 cut(s) 213, 318
CviAII CATG 4 cut(s) 83, 169, 541, 569
CviQI GTAC 2 cut(s) 213, 318
DpnI GATC 4 cut(s) 179, 444, 573, 680
DpnII GATC 4 cut(s) 177, 442, 571, 678
Eam1104I CTCTTC 2 cut(s) 335, 469
EarI CTCTTC 2 cut(s) 335, 469
Eco130I CCWWGG 1 cut(s) 502
Eco31I GGTCTC 2 cut(s) 419, 494
Eco47I GGWCC 2 cut(s) 185, 267
Eco72I CACGTG 1 cut(s) 309
Eco88I CYCGRG 6 cut(s) 111, 189, 196, 207, 416, 621
Eco91I GGTNACC 1 cut(s) 544
EcoO109I RGGNCCY 1 cut(s) 267
EcoO65I GGTNACC 1 cut(s) 544
EcoT14I CCWWGG 1 cut(s) 502
ErhI CCWWGG 1 cut(s) 502
FaeI CATG 4 cut(s) 86, 172, 544, 572
FaiI YATR 6 cut(s) 84, 170, 542, 570, 656, 716
FaqI GGGAC 3 cut(s) 171, 280, 357
FatI CATG 4 cut(s) 82, 168, 540, 568
FauI CCCGC 4 cut(s) 476, 598, 654, 792
Fnu4HI GCNGC 4 cut(s) 127, 356, 794, 797
FokI GGATG 5 cut(s) 335, 518, 703, 758, 821
Fsp4HI GCNGC 4 cut(s) 127, 356, 794, 797
FspBI CTAG 2 cut(s) 336, 503
GluI GCNGC 4 cut(s) 127, 356, 794, 797
HaeIII GGCC 6 cut(s) 56, 126, 249, 350, 740, 813
HapII CCGG 6 cut(s) 34, 99, 121, 377, 461, 698
Hin1II CATG 4 cut(s) 86, 172, 544, 572
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HinfI GANTC 4 cut(s) 109, 194, 291, 370
HpaII CCGG 6 cut(s) 34, 99, 121, 377, 461, 698
Hpy166II GTNNAC 1 cut(s) 670
Hpy188I TCNGA 4 cut(s) 14, 227, 296, 304
Hpy8I GTNNAC 1 cut(s) 670
Hpy99I CGWCG 2 cut(s) 185, 732
HpyAV CCTTC 4 cut(s) 59, 446, 545, 783
HpyCH4IV ACGT 1 cut(s) 308
HpyF10VI GCNNNNNNNGC 3 cut(s) 132, 504, 746
HpySE526I ACGT 1 cut(s) 308
Hsp92II CATG 4 cut(s) 86, 172, 544, 572
KflI GGGWCCC 1 cut(s) 267
Kzo9I GATC 4 cut(s) 177, 442, 571, 678
LmnI GCTCC 5 cut(s) 103, 527, 643, 694, 760
LpnPI CCDG 8 cut(s) 47, 112, 134, 249, 390, 474, 615, 711
Lsp1109I GCAGC 1 cut(s) 780
LweI GCATC 1 cut(s) 736
MaeI CTAG 2 cut(s) 336, 503
MaeII ACGT 1 cut(s) 308
MaeIII GTNAC 1 cut(s) 544
MalI GATC 4 cut(s) 179, 444, 573, 680
MboI GATC 4 cut(s) 177, 442, 571, 678
MboII GAAGA 5 cut(s) 74, 352, 353, 486, 605
MflI RGATCY 1 cut(s) 442
MhlI GDGCHC 3 cut(s) 160, 648, 709
MluCI AATT 1 cut(s) 818
MlyI GAGTC 4 cut(s) 103, 188, 300, 379
MmeI TCCRAC 1 cut(s) 282
MseI TTAA 1 cut(s) 835
MslI CAYNNNNRTG 1 cut(s) 87
MspI CCGG 6 cut(s) 34, 99, 121, 377, 461, 698
MspR9I CCNGG 5 cut(s) 35, 100, 122, 377, 462
MvnI CGCG 6 cut(s) 355, 401, 472, 483, 576, 582
MwoI GCNNNNNNNGC 3 cut(s) 132, 504, 746
NciI CCSGG 5 cut(s) 35, 100, 122, 377, 462
NdeII GATC 4 cut(s) 177, 442, 571, 678
NlaIII CATG 4 cut(s) 86, 172, 544, 572
NlaIV GGNNCC 9 cut(s) 105, 125, 187, 205, 268, 269, 459, 529, 696
NmeAIII GCCGAG 2 cut(s) 82, 766
NruI TCGCGA 1 cut(s) 472
PaeR7I CTCGAG 1 cut(s) 111
PagI TCATGA 1 cut(s) 568
PaqCI CACCTGC 1 cut(s) 610
Pfl23II CGTACG 1 cut(s) 317
PkrI GCNGC 4 cut(s) 128, 357, 795, 798
Ple19I CGATCG 1 cut(s) 180
PleI GAGTC 4 cut(s) 103, 188, 299, 378
PmaCI CACGTG 1 cut(s) 309
PmlI CACGTG 1 cut(s) 309
PpsI GAGTC 4 cut(s) 103, 188, 299, 378
Ppu21I YACGTR 1 cut(s) 309
PpuMI RGGWCCY 1 cut(s) 267
Psp5II RGGWCCY 1 cut(s) 267
PspCI CACGTG 1 cut(s) 309
PspEI GGTNACC 1 cut(s) 544
PspLI CGTACG 1 cut(s) 317
PspN4I GGNNCC 9 cut(s) 105, 125, 187, 205, 268, 269, 459, 529, 696
PspPI GGNCC 6 cut(s) 54, 124, 185, 248, 267, 812
PspPPI RGGWCCY 1 cut(s) 267
PsuI RGATCY 1 cut(s) 442
PvuI CGATCG 1 cut(s) 180
RruI TCGCGA 1 cut(s) 472
RsaI GTAC 2 cut(s) 214, 319
RsaNI GTAC 2 cut(s) 213, 318
RseI CAYNNNNRTG 1 cut(s) 87
SaqAI TTAA 1 cut(s) 835
SatI GCNGC 4 cut(s) 127, 356, 794, 797
Sau3AI GATC 4 cut(s) 177, 442, 571, 678
Sau96I GGNCC 6 cut(s) 54, 124, 185, 248, 267, 812
SchI GAGTC 4 cut(s) 103, 188, 300, 379
ScrFI CCNGG 5 cut(s) 35, 100, 122, 377, 462
SduI GDGCHC 3 cut(s) 160, 648, 709
SfaNI GCATC 1 cut(s) 736
SfcI CTRYAG 1 cut(s) 714
Sfr274I CTCGAG 1 cut(s) 111
SinI GGWCC 2 cut(s) 185, 267
SlaI CTCGAG 1 cut(s) 111
SmiMI CAYNNNNRTG 1 cut(s) 87
SmlI CTYRAG 3 cut(s) 111, 365, 760
SmoI CTYRAG 3 cut(s) 111, 365, 760
Sse9I AATT 1 cut(s) 818
SspMI CTAG 2 cut(s) 336, 503
StyD4I CCNGG 5 cut(s) 33, 98, 120, 375, 460
StyI CCWWGG 1 cut(s) 502
TaiI ACGT 1 cut(s) 311
TaqI TCGA 7 cut(s) 112, 258, 392, 492, 591, 613, 777
TaqII GACCGA 1 cut(s) 173
TasI AATT 1 cut(s) 818
TauI GCSGC 3 cut(s) 129, 358, 799
Tru1I TTAA 1 cut(s) 835
Tru9I TTAA 1 cut(s) 835
TseI GCWGC 1 cut(s) 793
TspGWI ACGGA 2 cut(s) 335, 691
VpaK11BI GGWCC 2 cut(s) 185, 267
XcmI CCANNNNNNNNNTGG 2 cut(s) 169, 538
XhoI CTCGAG 1 cut(s) 111
XmaJI CCTAGG 1 cut(s) 502
XspI CTAG 2 cut(s) 336, 503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.