Rmu_sc0030235.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0030235.1
OG0000075
Physical Location & Seq
Forward (+)
6217 .. 9169
2953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0030235.1_g000004.1.cds

Sequence Viewer

Length: 1797 bp
atggcgcgtgagaatcgcggtgacggtgggctagaaggttcctctcgtagaggcgaggggattccccgtggtggtgctagtgcttctcgtggagagcgggaggatgcctctcgtagttgcggtggaggaggcccccggggggctggcgagagtgattccagaggaggtggtagtggggcctctcgtggggaggaagttgaggtattggagatcccgcgcacagctcgtggaattgcagtatctgctatcctatctgaatatagcggtagggtagctatggcccaatgcgttgaggcagataatgggtgtattgctgcaatggaagttgagcaagctgttgtgtccaaatatcggcgagttcaattccttgttcaaataatcgtactcgaccaaaggaggcaacagcgggtgcgtgaatttcaaggcatgcgacctcaccgttatcaaggacttgccgtcgaatatatattcacgttggcagggactgccgtgcccagtaggccgccggtggcagaatccggacatggtgcatcgggctccgagccaattccaacctatatggtgatgggtgcatttccgaggggggcgagggggttctatcgtttgtgtaggcttccgatctatgagagatttgagttggggaggtctccgggtaaggggttctcctttttcttggtgtgttgtatatgttgtggggtatccctactgacattgtgtgtttattatgcaaccgatatgccgaccgaggccccgagcaagagcgacgatccatatgccgatgttgatcctgacgtcgaggaggaggctaggaccaaaaggcaagaagttcccgttgctcgagagcctgctcggggtggtcaggatcagcccatgcaggtaggcaaggtgggtgtgcttccccaagtgtgcactggagagggtcttggtgatggggctcgggcctcggagcccaatgtggaggtagagatcttcgtgaaggagctgctggaggaggtggagcggcatcaaagcgataccggtgctcgtgttctcctggtccaggatgtggttctggaacagctggagatcgtttttggtgaggaggtgggtgaccttgtctcacgggaagtcatcattgttgatagtggggaggcgaagggttggatcgaggaagagggcggcgtcacaacttcgcctcaagagtccccccttggtgtcgccatcgacacatgtggtagtaagagatctcgggtggataatgtgtcgcacttgagatccgtgagtgagggttcgcggggttcacgtgatgaggttgtcgggggtctcgcttgtaccctgggcgagattggaatcaccgacggcaccatacttcatatggttgcagacctgggaactgtatcgggaggcgcaggagaggttgatgagggttgtgaattgaattaccatgcctctggcgagttggtggctcatttcaatctggagatagcaccgctacaaggggagttagaggaggatggcctgaggttggcagagaaagttaggacccaggtggctgaggtcgaggagcttctacaagatttggaaaggcaggtccgagaacgtgatgtcgagttggagcttaatgctgctgccttggagagtttggctccctatccagactgtgtggtggatctggagggtctggttgggaatctgcagagggaggtagaccgtttatgggatgtggagttggaggcaggcaaaaggcaagaagagatggaacggctcaggaaggagcaagtcgaggagcgggcacgatcaaataacttcgccaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

598

Amino Acids

64.66

Weight (kDa)

4.72

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 795
Acc36I ACCTGC 2 cut(s) 865, 1558
AccB1I GGYRCC 1 cut(s) 1340
AccB7I CCANNNNNTGG 1 cut(s) 1045
AccBSI CCGCTC 3 cut(s) 97, 1000, 1768
AccI GTMKAC 1 cut(s) 1686
AccII CGCG 4 cut(s) 7, 18, 217, 1273
AccIII TCCGGA 1 cut(s) 518
AclWI GGATC 7 cut(s) 205, 761, 779, 870, 1151, 1248, 1656
AcsI RAATTY 1 cut(s) 416
AcvI CACGTG 1 cut(s) 1283
AcyI GRCGYC 2 cut(s) 792, 1161
AfaI GTAC 2 cut(s) 384, 1312
AflIII ACRYGT 1 cut(s) 1208
AgeI ACCGGT 1 cut(s) 1016
AgsI TTSAA 5 cut(s) 362, 374, 422, 1417, 1453
AhdI GACNNNNNGTC 1 cut(s) 455
AjnI CCWGG 5 cut(s) 1032, 1038, 1314, 1365, 1524
AluBI AGCT 7 cut(s) 224, 275, 335, 982, 1060, 1546, 1597
AluI AGCT 7 cut(s) 224, 275, 335, 982, 1060, 1546, 1597
Alw21I GWGCWC 2 cut(s) 911, 1024
Alw26I GTCTC 3 cut(s) 651, 1102, 1307
Alw44I GTGCAC 1 cut(s) 907
AlwI GGATC 7 cut(s) 205, 761, 779, 870, 1151, 1248, 1656
AlwNI CAGNNNCTG 2 cut(s) 242, 485
Ama87I CYCGRG 6 cut(s) 135, 751, 837, 849, 936, 1227
Aor13HI TCCGGA 1 cut(s) 518
AoxI GGCC 7 cut(s) 130, 177, 279, 500, 747, 939, 1495
ApaLI GTGCAC 1 cut(s) 907
ApeKI GCWGC 4 cut(s) 314, 982, 1604, 1607
ApoI RAATTY 1 cut(s) 416
AsiGI ACCGGT 1 cut(s) 1016
AspLEI GCGC 3 cut(s) 7, 219, 1388
AspS9I GGNCC 9 cut(s) 131, 177, 280, 748, 810, 939, 1036, 1521, 1570
AsuC2I CCSGG 3 cut(s) 136, 137, 651
AsuHPI GGTGA 7 cut(s) 32, 428, 574, 938, 1088, 1100, 1324
AvaI CYCGRG 6 cut(s) 135, 751, 837, 849, 936, 1227
AvaII GGWCC 4 cut(s) 810, 1036, 1521, 1570
AxyI CCTNAGG 1 cut(s) 1499
BaeGI GKGCMC 3 cut(s) 495, 911, 1774
BanI GGYRCC 1 cut(s) 1340
BanII GRGCYC 3 cut(s) 539, 937, 951
BauI CACGAG 4 cut(s) 87, 183, 225, 1023
BbrPI CACGTG 1 cut(s) 1283
Bbv12I GWGCWC 2 cut(s) 911, 1024
BbvCI CCTCAGC 1 cut(s) 1533
BbvI GCAGC 4 cut(s) 301, 969, 1591, 1594
BccI CCATC 5 cut(s) 559, 923, 1208, 1487, 1729
BceAI ACGGC 4 cut(s) 440, 473, 1354, 1757
BcgI CGANNNNNNTGC 4 cut(s) 755, 789, 1001, 1035
BciT130I CCWGG 5 cut(s) 1034, 1040, 1316, 1367, 1526
BciVI GTATCC 1 cut(s) 709
BcnI CCSGG 3 cut(s) 136, 137, 651
BcoDI GTCTC 3 cut(s) 651, 1102, 1307
BfaI CTAG 3 cut(s) 32, 78, 807
BfmI CTRYAG 1 cut(s) 1673
BfuAI ACCTGC 2 cut(s) 865, 1558
BfuI GTATCC 1 cut(s) 709
BglI GCCNNNNNGGC 1 cut(s) 499
BglII AGATCT 2 cut(s) 966, 1223
BisI GCNGC 7 cut(s) 315, 503, 983, 1001, 1159, 1605, 1608
BlsI GCNGC 7 cut(s) 316, 504, 984, 1002, 1160, 1606, 1609
Bme1390I CCNGG 8 cut(s) 136, 137, 651, 1034, 1040, 1316, 1367, 1526
Bme18I GGWCC 4 cut(s) 810, 1036, 1521, 1570
BmeRI GACNNNNNGTC 1 cut(s) 455
BmeT110I CYCGRG 6 cut(s) 135, 751, 837, 849, 936, 1227
BmgT120I GGNCC 9 cut(s) 131, 177, 280, 748, 810, 939, 1036, 1521, 1570
BmiI GGNNCC 9 cut(s) 40, 133, 178, 538, 750, 948, 1342, 1523, 1626
BmrFI CCNGG 8 cut(s) 136, 137, 651, 1034, 1040, 1316, 1367, 1526
BmrI ACTGGG 1 cut(s) 489
BmsI GCATC 3 cut(s) 94, 539, 1012
BmuI ACTGGG 1 cut(s) 489
BplI GAGNNNNNCTC 4 cut(s) 92, 124, 1609, 1641
BpmI CTGGAG 5 cut(s) 933, 1007, 1082, 1478, 1673
Bpu10I CCTNAGC 2 cut(s) 1533, 1745
BpuEI CTTGAG 2 cut(s) 1161, 1270
BpuMI CCSGG 3 cut(s) 136, 137, 651
BsaAI YACGTR 1 cut(s) 1283
BsaBI GATNNNNATC 2 cut(s) 783, 1328
BsaHI GRCGYC 2 cut(s) 792, 1161
BsaI GGTCTC 2 cut(s) 651, 1307
BsaWI WCCGGW 2 cut(s) 518, 1016
Bse118I RCCGGY 2 cut(s) 505, 1016
Bse1I ACTGG 2 cut(s) 495, 916
Bse21I CCTNAGG 1 cut(s) 1499
Bse3DI GCAATG 1 cut(s) 324
Bse8I GATNNNNATC 2 cut(s) 783, 1328
BseAI TCCGGA 1 cut(s) 518
BseBI CCWGG 5 cut(s) 1034, 1040, 1316, 1367, 1526
BseGI GGATG 4 cut(s) 109, 1048, 1498, 1705
BseJI GATNNNNATC 2 cut(s) 783, 1328
BseMI GCAATG 1 cut(s) 324
BseMII CTCAG 3 cut(s) 1490, 1524, 1759
BseNI ACTGG 2 cut(s) 495, 916
BseRI GAGGAG 9 cut(s) 141, 177, 812, 815, 1004, 1094, 1502, 1556, 1778
BseSI GKGCMC 3 cut(s) 495, 911, 1774
BseXI GCAGC 4 cut(s) 301, 969, 1591, 1594
Bsh1236I CGCG 4 cut(s) 7, 18, 217, 1273
Bsh1285I CGRYCG 1 cut(s) 744
BshFI GGCC 7 cut(s) 132, 179, 281, 502, 749, 941, 1497
BshNI GGYRCC 1 cut(s) 1340
BshTI ACCGGT 1 cut(s) 1016
BsiEI CGRYCG 1 cut(s) 744
BsiHKAI GWGCWC 2 cut(s) 911, 1024
BsiHKCI CYCGRG 6 cut(s) 135, 751, 837, 849, 936, 1227
BsiSI CCGG 5 cut(s) 136, 506, 519, 650, 1017
BslFI GGGAC 2 cut(s) 496, 1168
BsmAI GTCTC 3 cut(s) 651, 1102, 1307
BsmFI GGGAC 2 cut(s) 496, 1168
BsnI GGCC 7 cut(s) 132, 179, 281, 502, 749, 941, 1497
Bso31I GGTCTC 2 cut(s) 651, 1307
BsoBI CYCGRG 6 cut(s) 135, 751, 837, 849, 936, 1227
Bsp1286I GDGCHC 7 cut(s) 495, 539, 911, 937, 951, 1024, 1774
Bsp13I TCCGGA 1 cut(s) 518
BspANI GGCC 7 cut(s) 132, 179, 281, 502, 749, 941, 1497
BspCNI CTCAG 3 cut(s) 1491, 1525, 1758
BspEI TCCGGA 1 cut(s) 518
BspFNI CGCG 4 cut(s) 7, 18, 217, 1273
BspLI GGNNCC 9 cut(s) 40, 133, 178, 538, 750, 948, 1342, 1523, 1626
BspMAI CTGCAG 1 cut(s) 1677
BspMI ACCTGC 2 cut(s) 865, 1558
BspPI GGATC 7 cut(s) 205, 761, 779, 870, 1151, 1248, 1656
BspT107I GGYRCC 1 cut(s) 1340
BspTNI GGTCTC 2 cut(s) 651, 1307
BsrBI CCGCTC 3 cut(s) 97, 1000, 1768
BsrDI GCAATG 1 cut(s) 324
BsrFI RCCGGY 2 cut(s) 505, 1016
BsrI ACTGG 2 cut(s) 495, 916
BssAI RCCGGY 2 cut(s) 505, 1016
BssNI GRCGYC 2 cut(s) 792, 1161
BssSI CACGAG 4 cut(s) 87, 183, 225, 1023
BssT1I CCWWGG 2 cut(s) 1189, 1611
Bst2BI CACGAG 4 cut(s) 87, 183, 225, 1023
Bst2UI CCWGG 5 cut(s) 1034, 1040, 1316, 1367, 1526
Bst4CI ACNGT 5 cut(s) 26, 440, 1375, 1640, 1691
Bst6I CTCTTC 2 cut(s) 1146, 1725
BstACI GRCGYC 2 cut(s) 792, 1161
BstAPI GCANNNNNTGC 2 cut(s) 242, 485
BstBAI YACGTR 1 cut(s) 1283
BstC8I GCNNGC 6 cut(s) 145, 333, 428, 846, 1717, 1770
BstDEI CTNAG 3 cut(s) 1499, 1533, 1745
BstDSI CCRYGG 1 cut(s) 67
BstEII GGTNACC 1 cut(s) 1088
BstENI CCTNNNNNAGG 1 cut(s) 1037
BstF5I GGATG 4 cut(s) 109, 1048, 1498, 1705
BstFNI CGCG 4 cut(s) 7, 18, 217, 1273
BstHHI GCGC 3 cut(s) 7, 219, 1388
BstMAI GTCTC 3 cut(s) 651, 1102, 1307
BstMCI CGRYCG 1 cut(s) 744
BstMWI GCNNNNNNNGC 3 cut(s) 242, 485, 499
BstNI CCWGG 5 cut(s) 1034, 1040, 1316, 1367, 1526
BstNSI RCATGY 2 cut(s) 430, 1212
BstPI GGTNACC 1 cut(s) 1088
BstSCI CCNGG 8 cut(s) 134, 135, 649, 1032, 1038, 1314, 1365, 1524
BstSFI CTRYAG 1 cut(s) 1673
BstSLI GKGCMC 3 cut(s) 495, 911, 1774
BstUI CGCG 4 cut(s) 7, 18, 217, 1273
BstV1I GCAGC 4 cut(s) 301, 969, 1591, 1594
BstX2I RGATCY 5 cut(s) 210, 966, 1223, 1253, 1648
BstXI CCANNNNNNTGG 1 cut(s) 1430
BstYI RGATCY 5 cut(s) 210, 966, 1223, 1253, 1648
Bsu36I CCTNAGG 1 cut(s) 1499
BsuI GTATCC 1 cut(s) 709
BsuRI GGCC 7 cut(s) 132, 179, 281, 502, 749, 941, 1497
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 4 cut(s) 109, 1048, 1498, 1705
BtsIMutI CAGTG 1 cut(s) 909
BveI ACCTGC 2 cut(s) 865, 1558
Cac8I GCNNGC 6 cut(s) 145, 333, 428, 846, 1717, 1770
CaiI CAGNNNCTG 2 cut(s) 242, 485
CfoI GCGC 3 cut(s) 7, 219, 1388
Cfr10I RCCGGY 2 cut(s) 505, 1016
Cfr13I GGNCC 9 cut(s) 131, 177, 280, 748, 810, 939, 1036, 1521, 1570
Cfr9I CCCGGG 1 cut(s) 135
CseI GACGC 1 cut(s) 1150
Csp6I GTAC 2 cut(s) 383, 1311
CspAI ACCGGT 1 cut(s) 1016
CviAII CATG 5 cut(s) 427, 524, 871, 1209, 1424
CviQI GTAC 2 cut(s) 383, 1311
DdeI CTNAG 3 cut(s) 1499, 1533, 1745
DriI GACNNNNNGTC 1 cut(s) 455
Eam1104I CTCTTC 2 cut(s) 1146, 1725
Eam1105I GACNNNNNGTC 1 cut(s) 455
EarI CTCTTC 2 cut(s) 1146, 1725
Eco130I CCWWGG 2 cut(s) 1189, 1611
Eco24I GRGCYC 3 cut(s) 539, 937, 951
Eco31I GGTCTC 2 cut(s) 651, 1307
Eco47I GGWCC 4 cut(s) 810, 1036, 1521, 1570
Eco72I CACGTG 1 cut(s) 1283
Eco81I CCTNAGG 1 cut(s) 1499
Eco88I CYCGRG 6 cut(s) 135, 751, 837, 849, 936, 1227
Eco91I GGTNACC 1 cut(s) 1088
EcoNI CCTNNNNNAGG 1 cut(s) 1037
EcoO109I RGGNCCY 4 cut(s) 131, 177, 748, 1521
EcoO65I GGTNACC 1 cut(s) 1088
EcoRII CCWGG 5 cut(s) 1032, 1038, 1314, 1365, 1524
EcoT14I CCWWGG 2 cut(s) 1189, 1611
EcoT38I GRGCYC 3 cut(s) 539, 937, 951
ErhI CCWWGG 2 cut(s) 1189, 1611
FaeI CATG 5 cut(s) 430, 527, 874, 1212, 1427
FaqI GGGAC 2 cut(s) 496, 1168
FatI CATG 5 cut(s) 426, 523, 870, 1208, 1423
FauI CCCGC 5 cut(s) 90, 222, 399, 1266, 1761
FauNDI CATATG 2 cut(s) 772, 1353
FblI GTMKAC 1 cut(s) 1686
Fnu4HI GCNGC 7 cut(s) 315, 503, 983, 1001, 1159, 1605, 1608
FokI GGATG 4 cut(s) 116, 1055, 1505, 1712
FriOI GRGCYC 3 cut(s) 539, 937, 951
Fsp4HI GCNGC 7 cut(s) 315, 503, 983, 1001, 1159, 1605, 1608
FspBI CTAG 3 cut(s) 32, 78, 807
GlaI GCGC 3 cut(s) 6, 218, 1387
GluI GCNGC 7 cut(s) 315, 503, 983, 1001, 1159, 1605, 1608
GsuI CTGGAG 5 cut(s) 933, 1007, 1082, 1478, 1673
HaeIII GGCC 7 cut(s) 132, 179, 281, 502, 749, 941, 1497
HapII CCGG 5 cut(s) 136, 506, 519, 650, 1017
HgaI GACGC 1 cut(s) 1150
HhaI GCGC 3 cut(s) 7, 219, 1388
Hin1I GRCGYC 2 cut(s) 792, 1161
Hin1II CATG 5 cut(s) 430, 527, 874, 1212, 1427
Hin6I GCGC 3 cut(s) 5, 217, 1386
HinP1I GCGC 3 cut(s) 5, 217, 1386
HinfI GANTC 7 cut(s) 13, 61, 155, 515, 1181, 1329, 1669
HpaII CCGG 5 cut(s) 136, 506, 519, 650, 1017
HphI GGTGA 7 cut(s) 32, 428, 574, 938, 1088, 1100, 1324
Hpy166II GTNNAC 3 cut(s) 909, 1280, 1687
Hpy188I TCNGA 6 cut(s) 256, 541, 579, 618, 946, 1574
Hpy8I GTNNAC 3 cut(s) 909, 1280, 1687
Hpy99I CGWCG 4 cut(s) 461, 767, 797, 1340
HpyAV CCTTC 4 cut(s) 29, 970, 1129, 1744
HpyCH4III ACNGT 5 cut(s) 26, 440, 1375, 1640, 1691
HpyCH4IV ACGT 4 cut(s) 473, 792, 1282, 1579
HpyCH4V TGCA 9 cut(s) 236, 317, 530, 572, 728, 874, 909, 1361, 1675
HpyF10VI GCNNNNNNNGC 3 cut(s) 242, 485, 499
HpyF3I CTNAG 3 cut(s) 1499, 1533, 1745
HpySE526I ACGT 4 cut(s) 473, 792, 1282, 1579
Hsp92I GRCGYC 2 cut(s) 792, 1161
Hsp92II CATG 5 cut(s) 430, 527, 874, 1212, 1427
HspAI GCGC 3 cut(s) 5, 217, 1386
Kpn2I TCCGGA 1 cut(s) 518
LmnI GCTCC 9 cut(s) 542, 946, 979, 997, 1543, 1594, 1630, 1753, 1765
Lsp1109I GCAGC 4 cut(s) 301, 969, 1591, 1594
LweI GCATC 3 cut(s) 94, 539, 1012
MaeI CTAG 3 cut(s) 32, 78, 807
MaeII ACGT 4 cut(s) 473, 792, 1282, 1579
MaeIII GTNAC 3 cut(s) 20, 1088, 1162
MbiI CCGCTC 3 cut(s) 97, 1000, 1768
MboII GAAGA 3 cut(s) 961, 1163, 1742
MflI RGATCY 5 cut(s) 210, 966, 1223, 1253, 1648
MhlI GDGCHC 7 cut(s) 495, 539, 911, 937, 951, 1024, 1774
MluCI AATT 6 cut(s) 231, 362, 416, 546, 1412, 1417
MlyI GAGTC 1 cut(s) 1190
MmeI TCCRAC 4 cut(s) 575, 1121, 1572, 1689
MroI TCCGGA 1 cut(s) 518
MseI TTAA 1 cut(s) 1599
MspA1I CMGCKG 2 cut(s) 406, 1060
MspI CCGG 5 cut(s) 136, 506, 519, 650, 1017
MspR9I CCNGG 8 cut(s) 136, 137, 651, 1034, 1040, 1316, 1367, 1526
MvaI CCWGG 5 cut(s) 1034, 1040, 1316, 1367, 1526
MvnI CGCG 4 cut(s) 7, 18, 217, 1273
MwoI GCNNNNNNNGC 3 cut(s) 242, 485, 499
NciI CCSGG 3 cut(s) 136, 137, 651
NdeI CATATG 2 cut(s) 772, 1353
NlaIII CATG 5 cut(s) 430, 527, 874, 1212, 1427
NlaIV GGNNCC 9 cut(s) 40, 133, 178, 538, 750, 948, 1342, 1523, 1626
NmuCI GTSAC 3 cut(s) 20, 1088, 1162
NspI RCATGY 2 cut(s) 430, 1212
PaeI GCATGC 1 cut(s) 430
PaeR7I CTCGAG 1 cut(s) 837
PasI CCCWGGG 1 cut(s) 1315
PciI ACATGT 1 cut(s) 1208
PfeI GAWTC 6 cut(s) 13, 61, 155, 515, 1329, 1669
PflFI GACNNNGTC 1 cut(s) 1094
PflMI CCANNNNNTGG 1 cut(s) 1045
PfoI TCCNGGA 1 cut(s) 1038
PinAI ACCGGT 1 cut(s) 1016
PkrI GCNGC 7 cut(s) 316, 504, 984, 1002, 1160, 1606, 1609
PleI GAGTC 1 cut(s) 1189
PmaCI CACGTG 1 cut(s) 1283
PmlI CACGTG 1 cut(s) 1283
PpsI GAGTC 1 cut(s) 1189
Ppu21I YACGTR 1 cut(s) 1283
PpuMI RGGWCCY 1 cut(s) 1521
PscI ACATGT 1 cut(s) 1208
Psp5II RGGWCCY 1 cut(s) 1521
Psp6I CCWGG 5 cut(s) 1032, 1038, 1314, 1365, 1524
PspCI CACGTG 1 cut(s) 1283
PspEI GGTNACC 1 cut(s) 1088
PspGI CCWGG 5 cut(s) 1032, 1038, 1314, 1365, 1524
PspN4I GGNNCC 9 cut(s) 40, 133, 178, 538, 750, 948, 1342, 1523, 1626
PspPI GGNCC 9 cut(s) 131, 177, 280, 748, 810, 939, 1036, 1521, 1570
PspPPI RGGWCCY 1 cut(s) 1521
PstI CTGCAG 1 cut(s) 1677
PstNI CAGNNNCTG 2 cut(s) 242, 485
PsuI RGATCY 5 cut(s) 210, 966, 1223, 1253, 1648
PsyI GACNNNGTC 1 cut(s) 1094
PvuII CAGCTG 1 cut(s) 1060
RsaI GTAC 2 cut(s) 384, 1312
RsaNI GTAC 2 cut(s) 383, 1311
SaqAI TTAA 1 cut(s) 1599
SatI GCNGC 7 cut(s) 315, 503, 983, 1001, 1159, 1605, 1608
Sau96I GGNCC 9 cut(s) 131, 177, 280, 748, 810, 939, 1036, 1521, 1570
SchI GAGTC 1 cut(s) 1190
ScrFI CCNGG 8 cut(s) 136, 137, 651, 1034, 1040, 1316, 1367, 1526
SduI GDGCHC 7 cut(s) 495, 539, 911, 937, 951, 1024, 1774
SfaNI GCATC 3 cut(s) 94, 539, 1012
SfcI CTRYAG 1 cut(s) 1673
Sfr274I CTCGAG 1 cut(s) 837
SgrAI CRCCGGYG 1 cut(s) 505
SinI GGWCC 4 cut(s) 810, 1036, 1521, 1570
SlaI CTCGAG 1 cut(s) 837
SmaI CCCGGG 1 cut(s) 137
SmlI CTYRAG 3 cut(s) 837, 1176, 1249
SmoI CTYRAG 3 cut(s) 837, 1176, 1249
SphI GCATGC 1 cut(s) 430
Sse9I AATT 6 cut(s) 231, 362, 416, 546, 1412, 1417
SspMI CTAG 3 cut(s) 32, 78, 807
StyD4I CCNGG 8 cut(s) 134, 135, 649, 1032, 1038, 1314, 1365, 1524
StyI CCWWGG 2 cut(s) 1189, 1611
TaaI ACNGT 5 cut(s) 26, 440, 1375, 1640, 1691
TaiI ACGT 4 cut(s) 476, 795, 1285, 1582
TaqI TCGA 9 cut(s) 387, 459, 795, 838, 1146, 1203, 1539, 1587, 1761
TaqII GACCGA 1 cut(s) 758
TasI AATT 6 cut(s) 231, 362, 416, 546, 1412, 1417
TauI GCSGC 3 cut(s) 505, 1003, 1161
TfiI GAWTC 6 cut(s) 13, 61, 155, 515, 1329, 1669
Tru1I TTAA 1 cut(s) 1599
Tru9I TTAA 1 cut(s) 1599
TscAI CASTG 1 cut(s) 916
TseFI GTSAC 3 cut(s) 20, 1088, 1162
TseI GCWGC 4 cut(s) 314, 982, 1604, 1607
Tsp45I GTSAC 3 cut(s) 20, 1088, 1162
TspDTI ATGAA 1 cut(s) 1340
TspGWI ACGGA 1 cut(s) 1246
TspMI CCCGGG 1 cut(s) 135
TspRI CASTG 1 cut(s) 916
Tth111I GACNNNGTC 1 cut(s) 1094
Van91I CCANNNNNTGG 1 cut(s) 1045
VneI GTGCAC 1 cut(s) 907
VpaK11BI GGWCC 4 cut(s) 810, 1036, 1521, 1570
XagI CCTNNNNNAGG 1 cut(s) 1037
XapI RAATTY 1 cut(s) 416
XceI RCATGY 2 cut(s) 430, 1212
XcmI CCANNNNNNNNNTGG 2 cut(s) 908, 1351
XhoI CTCGAG 1 cut(s) 837
XmaI CCCGGG 1 cut(s) 135
XmiI GTMKAC 1 cut(s) 1686
XspI CTAG 3 cut(s) 32, 78, 807
ZraI GACGTC 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.