Rmu_sc0003705.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003705.1
OG0000075
Physical Location & Seq
Reverse (-)
37333 .. 38929
1597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003705.1_g000011.1.cds

Sequence Viewer

Length: 1164 bp
atgtcgctgcctgatgagatgtatcagaggtttctcgatgtcgtgttggaatatctgaatcagcgggccgaggaagaagccggtgccgagaggcatgaggtttggggtacacaagagccgattcaagatctacaggagcagcccatgcaggctggtgaggcgagtgagggtccccaagtgcttgttggcgagcatcagtcccctgagactcgagaagtgatgaggcagtccccccagatctcggtaggaggggaggatcttggtggcgtggctctggcctcggagcccaagggggagatggagatctccgtcgaggagttgctggaggaggcgcctgagatgcaaccccggttcggagagggtattgcttgggtttcccaggttaccgagaaggggacccatggccaagatggcgagggggatggagtccgagtttggtgtctcatccatacccgcggtagcaagaggtctggagttgacaatgtatcgcactcaagatctgcgagtgggggctcgcgaggttctcgcaatgaggttgtcgggggtctcgcgtgcaccctgggtgagattggaattactgatgctgccatcctccatatggtcactgacctgcggaactgtcatcgcgatcgcagtcacgtgagtgccgaagacctgcgcctggggtatccggaagctcaagagaggttgatgagggctgtgaacatgaattaccatgcctctggcgagttagtagcgcattttgatcgggagataacctggctgcagggggacctaatgttcagagagagcgggcacgtgagcttcagagaggctcgtcgtcaagaggccgagggtgctatcgctccactgagggaggtgaacttggatcttactgggaagctgcaacgggtggaggatggcctgaggttggtagatcaagttagggcacaggttagtaaggctgaagagcttctacaggacttggaaaggcaggtccgagaacaagatgtcgagttggagcttcgtgcggcttcctgggagagtttgactccttatcccgatctcgtggtggatttggaggggcaggttggtaatctgcaaagggaggttgaccgtttaagggatgttgagcttgaagcaggcgagaaggaggcagagatggagggtttagaaaggagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

387

Amino Acids

43.16

Weight (kDa)

4.63

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 618, 663, 964, 1057
AccB1I GGYRCC 2 cut(s) 83, 331
AccBSI CCGCTC 1 cut(s) 792
AccII CGCG 4 cut(s) 456, 517, 551, 627
AccIII TCCGGA 1 cut(s) 670
AciI CCGC 6 cut(s) 64, 454, 456, 613, 792, 1010
AclWI GGATC 2 cut(s) 264, 876
AcoI YGGCCR 1 cut(s) 403
AcuI CTGAAG 2 cut(s) 790, 966
AcvI CACGTG 2 cut(s) 640, 799
AcyI GRCGYC 1 cut(s) 332
AfaI GTAC 1 cut(s) 109
AfiI CCNNNNNNNGG 7 cut(s) 241, 353, 393, 598, 661, 910, 1102
AgsI TTSAA 2 cut(s) 125, 1118
AjnI CCWGG 5 cut(s) 378, 558, 660, 758, 1016
AleI CACNNNNGTG 1 cut(s) 642
AloI GAACNNNNNNTCC 2 cut(s) 764, 796
AluBI AGCT 6 cut(s) 677, 804, 883, 952, 1003, 1114
AluI AGCT 6 cut(s) 677, 804, 883, 952, 1003, 1114
Alw21I GWGCWC 1 cut(s) 557
Alw26I GTCTC 3 cut(s) 200, 446, 551
Alw44I GTGCAC 1 cut(s) 553
AlwI GGATC 2 cut(s) 264, 876
Ama87I CYCGRG 1 cut(s) 210
Aor13HI TCCGGA 1 cut(s) 670
AoxI GGCC 5 cut(s) 66, 276, 403, 828, 901
ApaLI GTGCAC 1 cut(s) 553
ApeKI GCWGC 5 cut(s) 7, 139, 584, 763, 883
AsiSI GCGATCGC 1 cut(s) 631
Asp700I GAANNNNTTC 1 cut(s) 951
AspLEI GCGC 3 cut(s) 334, 660, 739
AspS9I GGNCC 5 cut(s) 66, 170, 396, 772, 976
AsuC2I CCSGG 1 cut(s) 349
AsuHPI GGTGA 3 cut(s) 167, 575, 871
AvaI CYCGRG 1 cut(s) 210
AvaII GGWCC 4 cut(s) 170, 396, 772, 976
AxyI CCTNAGG 1 cut(s) 905
BaeGI GKGCMC 3 cut(s) 557, 798, 931
BalI TGGCCA 1 cut(s) 405
BanI GGYRCC 2 cut(s) 83, 331
BanII GRGCYC 2 cut(s) 288, 515
BarI GAAGNNNNNNTAC 2 cut(s) 939, 971
BauI CACGAG 1 cut(s) 1046
BbrPI CACGTG 2 cut(s) 640, 799
BbsI GAAGAC 1 cut(s) 657
Bbv12I GWGCWC 1 cut(s) 557
BbvI GCAGC 4 cut(s) 151, 571, 750, 870
BccI CCATC 6 cut(s) 292, 404, 416, 596, 893, 1135
BcgI CGANNNNNNTGC 2 cut(s) 728, 762
BciT130I CCWGG 5 cut(s) 380, 560, 662, 760, 1018
BciVI GTATCC 1 cut(s) 678
BcnI CCSGG 1 cut(s) 349
BcoDI GTCTC 3 cut(s) 200, 446, 551
BfmI CTRYAG 3 cut(s) 131, 764, 956
BfoI RGCGCY 1 cut(s) 335
BfuAI ACCTGC 4 cut(s) 618, 663, 964, 1057
BfuI GTATCC 1 cut(s) 678
BglI GCCNNNNNGGC 1 cut(s) 411
BglII AGATCT 4 cut(s) 127, 237, 303, 497
BisI GCNGC 6 cut(s) 8, 140, 585, 764, 884, 1011
BlsI GCNGC 6 cut(s) 9, 141, 586, 765, 885, 1012
Bme1390I CCNGG 6 cut(s) 349, 380, 560, 662, 760, 1018
Bme18I GGWCC 4 cut(s) 170, 396, 772, 976
BmeT110I CYCGRG 1 cut(s) 210
BmgT120I GGNCC 5 cut(s) 66, 170, 396, 772, 976
BmiI GGNNCC 8 cut(s) 85, 171, 172, 285, 333, 397, 398, 773
BmrFI CCNGG 6 cut(s) 349, 380, 560, 662, 760, 1018
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 3 cut(s) 202, 330, 571
BmuI ACTGGG 1 cut(s) 885
BpiI GAAGAC 1 cut(s) 657
BplI GAGNNNNNCTC 2 cut(s) 1015, 1047
BpmI CTGGAG 2 cut(s) 344, 492
BpuEI CTTGAG 2 cut(s) 478, 663
BpuMI CCSGG 1 cut(s) 349
BsaAI YACGTR 2 cut(s) 640, 799
BsaBI GATNNNNATC 1 cut(s) 302
BsaHI GRCGYC 1 cut(s) 332
BsaI GGTCTC 1 cut(s) 551
BsaWI WCCGGW 1 cut(s) 670
BsaXI ACNNNNNCTCC 2 cut(s) 417, 447
Bsc4I CCNNNNNNNGG 7 cut(s) 241, 353, 393, 598, 661, 910, 1102
Bse118I RCCGGY 1 cut(s) 80
Bse1I ACTGG 1 cut(s) 880
Bse21I CCTNAGG 1 cut(s) 905
Bse3DI GCAATG 1 cut(s) 535
Bse8I GATNNNNATC 1 cut(s) 302
BseAI TCCGGA 1 cut(s) 670
BseBI CCWGG 5 cut(s) 380, 560, 662, 760, 1018
BseGI GGATG 5 cut(s) 427, 444, 588, 904, 1111
BseJI GATNNNNATC 1 cut(s) 302
BseLI CCNNNNNNNGG 7 cut(s) 241, 353, 393, 598, 661, 910, 1102
BseMI GCAATG 1 cut(s) 535
BseMII CTCAG 4 cut(s) 195, 327, 842, 896
BseNI ACTGG 1 cut(s) 880
BseRI GAGGAG 2 cut(s) 329, 341
BseSI GKGCMC 3 cut(s) 557, 798, 931
BseXI GCAGC 4 cut(s) 151, 571, 750, 870
Bsh1236I CGCG 4 cut(s) 456, 517, 551, 627
Bsh1285I CGRYCG 1 cut(s) 631
BshFI GGCC 5 cut(s) 68, 278, 405, 830, 903
BshNI GGYRCC 2 cut(s) 83, 331
BsiEI CGRYCG 1 cut(s) 631
BsiHKAI GWGCWC 1 cut(s) 557
BsiHKCI CYCGRG 1 cut(s) 210
BsiSI CCGG 3 cut(s) 81, 349, 671
BslFI GGGAC 5 cut(s) 156, 184, 214, 409, 785
BslI CCNNNNNNNGG 7 cut(s) 241, 353, 393, 598, 661, 910, 1102
BsmAI GTCTC 3 cut(s) 200, 446, 551
BsmFI GGGAC 5 cut(s) 156, 184, 214, 409, 785
BsnI GGCC 5 cut(s) 68, 278, 405, 830, 903
Bso31I GGTCTC 1 cut(s) 551
BsoBI CYCGRG 1 cut(s) 210
Bsp1286I GDGCHC 5 cut(s) 288, 515, 557, 798, 931
Bsp13I TCCGGA 1 cut(s) 670
Bsp19I CCATGG 1 cut(s) 400
Bsp68I TCGCGA 2 cut(s) 517, 627
BspACI CCGC 6 cut(s) 64, 454, 456, 613, 792, 1010
BspANI GGCC 5 cut(s) 68, 278, 405, 830, 903
BspCNI CTCAG 4 cut(s) 196, 328, 843, 897
BspEI TCCGGA 1 cut(s) 670
BspFNI CGCG 4 cut(s) 456, 517, 551, 627
BspLI GGNNCC 8 cut(s) 85, 171, 172, 285, 333, 397, 398, 773
BspMAI CTGCAG 1 cut(s) 768
BspMI ACCTGC 4 cut(s) 618, 663, 964, 1057
BspPI GGATC 2 cut(s) 264, 876
BspQI GCTCTTC 1 cut(s) 942
BspT107I GGYRCC 2 cut(s) 83, 331
BspTNI GGTCTC 1 cut(s) 551
BsrBI CCGCTC 1 cut(s) 792
BsrDI GCAATG 1 cut(s) 535
BsrFI RCCGGY 1 cut(s) 80
BsrI ACTGG 1 cut(s) 880
BssAI RCCGGY 1 cut(s) 80
BssNI GRCGYC 1 cut(s) 332
BssSI CACGAG 1 cut(s) 1046
BssT1I CCWWGG 2 cut(s) 288, 400
Bst2BI CACGAG 1 cut(s) 1046
Bst2UI CCWGG 5 cut(s) 380, 560, 662, 760, 1018
Bst4CI ACNGT 2 cut(s) 620, 1097
Bst6I CTCTTC 1 cut(s) 942
BstACI GRCGYC 1 cut(s) 332
BstAPI GCANNNNNTGC 1 cut(s) 145
BstBAI YACGTR 2 cut(s) 640, 799
BstC8I GCNNGC 7 cut(s) 66, 150, 191, 515, 553, 794, 1123
BstDEI CTNAG 4 cut(s) 204, 336, 851, 905
BstDSI CCRYGG 2 cut(s) 400, 454
BstEII GGTNACC 1 cut(s) 382
BstF5I GGATG 5 cut(s) 427, 444, 588, 904, 1111
BstFNI CGCG 4 cut(s) 456, 517, 551, 627
BstH2I RGCGCY 1 cut(s) 335
BstHHI GCGC 3 cut(s) 334, 660, 739
BstMAI GTCTC 3 cut(s) 200, 446, 551
BstMCI CGRYCG 1 cut(s) 631
BstMWI GCNNNNNNNGC 5 cut(s) 145, 158, 340, 411, 836
BstNI CCWGG 5 cut(s) 380, 560, 662, 760, 1018
BstPI GGTNACC 1 cut(s) 382
BstSCI CCNGG 6 cut(s) 347, 378, 558, 660, 758, 1016
BstSFI CTRYAG 3 cut(s) 131, 764, 956
BstSLI GKGCMC 3 cut(s) 557, 798, 931
BstUI CGCG 4 cut(s) 456, 517, 551, 627
BstV1I GCAGC 4 cut(s) 151, 571, 750, 870
BstV2I GAAGAC 1 cut(s) 657
BstX2I RGATCY 6 cut(s) 127, 237, 256, 303, 497, 868
BstXI CCANNNNNNTGG 1 cut(s) 722
BstYI RGATCY 6 cut(s) 127, 237, 256, 303, 497, 868
Bsu36I CCTNAGG 1 cut(s) 905
BsuI GTATCC 1 cut(s) 678
BsuRI GGCC 5 cut(s) 68, 278, 405, 830, 903
BtgI CCRYGG 2 cut(s) 400, 454
BtgZI GCGATG 1 cut(s) 608
BtsCI GGATG 5 cut(s) 427, 444, 588, 904, 1111
BtsIMutI CAGTG 2 cut(s) 603, 848
BtuMI TCGCGA 2 cut(s) 517, 627
BveI ACCTGC 4 cut(s) 618, 663, 964, 1057
Cac8I GCNNGC 7 cut(s) 66, 150, 191, 515, 553, 794, 1123
CfoI GCGC 3 cut(s) 334, 660, 739
Cfr10I RCCGGY 1 cut(s) 80
Cfr13I GGNCC 5 cut(s) 66, 170, 396, 772, 976
Cfr42I CCGCGG 1 cut(s) 457
Csp6I GTAC 1 cut(s) 108
CviAII CATG 5 cut(s) 95, 145, 401, 706, 716
CviQI GTAC 1 cut(s) 108
DdeI CTNAG 4 cut(s) 204, 336, 851, 905
DinI GGCGCC 1 cut(s) 333
EaeI YGGCCR 1 cut(s) 403
Eam1104I CTCTTC 1 cut(s) 942
EarI CTCTTC 1 cut(s) 942
Eco130I CCWWGG 2 cut(s) 288, 400
Eco24I GRGCYC 2 cut(s) 288, 515
Eco31I GGTCTC 1 cut(s) 551
Eco47I GGWCC 4 cut(s) 170, 396, 772, 976
Eco57I CTGAAG 2 cut(s) 790, 966
Eco72I CACGTG 2 cut(s) 640, 799
Eco81I CCTNAGG 1 cut(s) 905
Eco88I CYCGRG 1 cut(s) 210
Eco91I GGTNACC 1 cut(s) 382
EcoO109I RGGNCCY 3 cut(s) 170, 396, 772
EcoO65I GGTNACC 1 cut(s) 382
EcoRII CCWGG 5 cut(s) 378, 558, 660, 758, 1016
EcoT14I CCWWGG 2 cut(s) 288, 400
EcoT38I GRGCYC 2 cut(s) 288, 515
EgeI GGCGCC 1 cut(s) 333
EheI GGCGCC 1 cut(s) 333
ErhI CCWWGG 2 cut(s) 288, 400
FaeI CATG 5 cut(s) 98, 148, 404, 709, 719
FaiI YATR 8 cut(s) 96, 146, 402, 450, 597, 599, 707, 717
FaqI GGGAC 5 cut(s) 156, 184, 214, 409, 785
FatI CATG 5 cut(s) 94, 144, 400, 705, 715
FauI CCCGC 3 cut(s) 57, 461, 785
FauNDI CATATG 1 cut(s) 597
Fnu4HI GCNGC 6 cut(s) 8, 140, 585, 764, 884, 1011
FokI GGATG 5 cut(s) 431, 434, 575, 911, 1118
FriOI GRGCYC 2 cut(s) 288, 515
Fsp4HI GCNGC 6 cut(s) 8, 140, 585, 764, 884, 1011
GlaI GCGC 3 cut(s) 333, 659, 738
GluI GCNGC 6 cut(s) 8, 140, 585, 764, 884, 1011
GsuI CTGGAG 2 cut(s) 344, 492
HaeII RGCGCY 1 cut(s) 335
HaeIII GGCC 5 cut(s) 68, 278, 405, 830, 903
HapII CCGG 3 cut(s) 81, 349, 671
HhaI GCGC 3 cut(s) 334, 660, 739
Hin1I GRCGYC 1 cut(s) 332
Hin1II CATG 5 cut(s) 98, 148, 404, 709, 719
Hin6I GCGC 3 cut(s) 332, 658, 737
HinP1I GCGC 3 cut(s) 332, 658, 737
HincII GTYRAC 2 cut(s) 478, 1093
HindII GTYRAC 2 cut(s) 478, 1093
HinfI GANTC 5 cut(s) 58, 121, 208, 426, 1030
HpaII CCGG 3 cut(s) 81, 349, 671
HphI GGTGA 3 cut(s) 167, 575, 871
Hpy166II GTNNAC 6 cut(s) 110, 478, 555, 703, 862, 1093
Hpy188I TCNGA 8 cut(s) 27, 57, 283, 356, 431, 785, 809, 980
Hpy8I GTNNAC 6 cut(s) 110, 478, 555, 703, 862, 1093
Hpy99I CGWCG 2 cut(s) 314, 822
HpyAV CCTTC 2 cut(s) 385, 1123
HpyCH4III ACNGT 2 cut(s) 620, 1097
HpyCH4IV ACGT 2 cut(s) 639, 798
HpyCH4V TGCA 6 cut(s) 148, 343, 555, 766, 886, 1081
HpyF10VI GCNNNNNNNGC 5 cut(s) 145, 158, 340, 411, 836
HpyF3I CTNAG 4 cut(s) 204, 336, 851, 905
HpySE526I ACGT 2 cut(s) 639, 798
Hsp92I GRCGYC 1 cut(s) 332
Hsp92II CATG 5 cut(s) 98, 148, 404, 709, 719
HspAI GCGC 3 cut(s) 332, 658, 737
KasI GGCGCC 1 cut(s) 331
KflI GGGWCCC 2 cut(s) 170, 396
Kpn2I TCCGGA 1 cut(s) 670
KspI CCGCGG 1 cut(s) 457
LguI GCTCTTC 1 cut(s) 942
LmnI GCTCC 4 cut(s) 136, 283, 850, 1000
Lsp1109I GCAGC 4 cut(s) 151, 571, 750, 870
LweI GCATC 3 cut(s) 202, 330, 571
MaeII ACGT 2 cut(s) 639, 798
MaeIII GTNAC 3 cut(s) 382, 601, 635
MbiI CCGCTC 1 cut(s) 792
MboII GAAGA 3 cut(s) 86, 662, 959
MflI RGATCY 6 cut(s) 127, 237, 256, 303, 497, 868
MhlI GDGCHC 5 cut(s) 288, 515, 557, 798, 931
MlsI TGGCCA 1 cut(s) 405
MluCI AATT 2 cut(s) 573, 709
MluNI TGGCCA 1 cut(s) 405
Mly113I GGCGCC 1 cut(s) 332
MlyI GAGTC 3 cut(s) 202, 435, 1024
MmeI TCCRAC 2 cut(s) 27, 978
Mox20I TGGCCA 1 cut(s) 405
MroI TCCGGA 1 cut(s) 670
MroXI GAANNNNTTC 1 cut(s) 951
MscI TGGCCA 1 cut(s) 405
MseI TTAA 1 cut(s) 1100
MslI CAYNNNNRTG 1 cut(s) 642
Msp20I TGGCCA 1 cut(s) 405
MspA1I CMGCKG 2 cut(s) 64, 456
MspI CCGG 3 cut(s) 81, 349, 671
MspR9I CCNGG 6 cut(s) 349, 380, 560, 662, 760, 1018
MvaI CCWGG 5 cut(s) 380, 560, 662, 760, 1018
MvnI CGCG 4 cut(s) 456, 517, 551, 627
MwoI GCNNNNNNNGC 5 cut(s) 145, 158, 340, 411, 836
NarI GGCGCC 1 cut(s) 332
NciI CCSGG 1 cut(s) 349
NcoI CCATGG 1 cut(s) 400
NdeI CATATG 1 cut(s) 597
NlaIII CATG 5 cut(s) 98, 148, 404, 709, 719
NlaIV GGNNCC 8 cut(s) 85, 171, 172, 285, 333, 397, 398, 773
NmeAIII GCCGAG 3 cut(s) 94, 112, 856
NmuCI GTSAC 2 cut(s) 601, 635
NruI TCGCGA 2 cut(s) 517, 627
OliI CACNNNNGTG 1 cut(s) 642
PaeR7I CTCGAG 1 cut(s) 210
PasI CCCWGGG 1 cut(s) 559
PciSI GCTCTTC 1 cut(s) 942
PcsI WCGNNNNNNNCGW 1 cut(s) 645
PdmI GAANNNNTTC 1 cut(s) 951
PfeI GAWTC 2 cut(s) 58, 121
PkrI GCNGC 6 cut(s) 9, 141, 586, 765, 885, 1012
Ple19I CGATCG 1 cut(s) 631
PleI GAGTC 3 cut(s) 202, 434, 1024
PluTI GGCGCC 1 cut(s) 335
PmaCI CACGTG 2 cut(s) 640, 799
PmlI CACGTG 2 cut(s) 640, 799
PpsI GAGTC 3 cut(s) 202, 434, 1024
Ppu21I YACGTR 2 cut(s) 640, 799
PpuMI RGGWCCY 3 cut(s) 170, 396, 772
Psp5II RGGWCCY 3 cut(s) 170, 396, 772
Psp6I CCWGG 5 cut(s) 378, 558, 660, 758, 1016
PspCI CACGTG 2 cut(s) 640, 799
PspEI GGTNACC 1 cut(s) 382
PspGI CCWGG 5 cut(s) 378, 558, 660, 758, 1016
PspN4I GGNNCC 8 cut(s) 85, 171, 172, 285, 333, 397, 398, 773
PspPI GGNCC 5 cut(s) 66, 170, 396, 772, 976
PspPPI RGGWCCY 3 cut(s) 170, 396, 772
PsrI GAACNNNNNNTAC 2 cut(s) 695, 727
PstI CTGCAG 1 cut(s) 768
PsuI RGATCY 6 cut(s) 127, 237, 256, 303, 497, 868
PvuI CGATCG 1 cut(s) 631
RgaI GCGATCGC 1 cut(s) 631
RruI TCGCGA 2 cut(s) 517, 627
RsaI GTAC 1 cut(s) 109
RsaNI GTAC 1 cut(s) 108
RseI CAYNNNNRTG 1 cut(s) 642
SacII CCGCGG 1 cut(s) 457
SapI GCTCTTC 1 cut(s) 942
SaqAI TTAA 1 cut(s) 1100
SatI GCNGC 6 cut(s) 8, 140, 585, 764, 884, 1011
Sau96I GGNCC 5 cut(s) 66, 170, 396, 772, 976
SchI GAGTC 3 cut(s) 202, 435, 1024
ScrFI CCNGG 6 cut(s) 349, 380, 560, 662, 760, 1018
SduI GDGCHC 5 cut(s) 288, 515, 557, 798, 931
SfaAI GCGATCGC 1 cut(s) 631
SfaNI GCATC 3 cut(s) 202, 330, 571
SfcI CTRYAG 3 cut(s) 131, 764, 956
SfoI GGCGCC 1 cut(s) 333
Sfr274I CTCGAG 1 cut(s) 210
Sfr303I CCGCGG 1 cut(s) 457
SgfI GCGATCGC 1 cut(s) 631
SgrBI CCGCGG 1 cut(s) 457
SinI GGWCC 4 cut(s) 170, 396, 772, 976
SlaI CTCGAG 1 cut(s) 210
SmiMI CAYNNNNRTG 1 cut(s) 642
SmlI CTYRAG 3 cut(s) 210, 493, 678
SmoI CTYRAG 3 cut(s) 210, 493, 678
Sse9I AATT 2 cut(s) 573, 709
SsiI CCGC 6 cut(s) 64, 454, 456, 613, 792, 1010
SspDI GGCGCC 1 cut(s) 331
StyD4I CCNGG 6 cut(s) 347, 378, 558, 660, 758, 1016
StyI CCWWGG 2 cut(s) 288, 400
TaaI ACNGT 2 cut(s) 620, 1097
TaiI ACGT 2 cut(s) 642, 801
TaqI TCGA 4 cut(s) 36, 211, 312, 993
TasI AATT 2 cut(s) 573, 709
TauI GCSGC 1 cut(s) 1013
TfiI GAWTC 2 cut(s) 58, 121
Tru1I TTAA 1 cut(s) 1100
Tru9I TTAA 1 cut(s) 1100
TscAI CASTG 2 cut(s) 610, 855
TseFI GTSAC 2 cut(s) 601, 635
TseI GCWGC 5 cut(s) 7, 139, 584, 763, 883
Tsp45I GTSAC 2 cut(s) 601, 635
TspDTI ATGAA 1 cut(s) 722
TspGWI ACGGA 1 cut(s) 298
TspRI CASTG 2 cut(s) 610, 855
VneI GTGCAC 1 cut(s) 553
VpaK11BI GGWCC 4 cut(s) 170, 396, 772, 976
XcmI CCANNNNNNNNNTGG 4 cut(s) 182, 295, 407, 595
XhoI CTCGAG 1 cut(s) 210
XmnI GAANNNNTTC 1 cut(s) 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.