Rmu_sc0006315.1_g000014

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006315.1
OG0000075
Physical Location & Seq
Reverse (-)
63315 .. 66198
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006315.1_g000014.1.cds

Sequence Viewer

Length: 2502 bp
atgggtcctaatagggctggtaacgcaaaagcgagtgaaagggctgaagagcccgctgcggggactgtcaataggagaggggatgaagggggttctggcgcccagctgataccgacaggtagcatagccaggggtagcgatggaaggtggcagttatgtgatgggactcccattgatcagcctggccatagcatgactgaagacgagatccaggagtttagagtgaattggagaatcccggatgaggtgaagcttcgtcccttgcgaaagggggagatggtgagtcaccctgaagagggttgtactgccgtgtacgagtaccaatttaggtgcggactgtcactaccgctacctggttggctacagtacattttgttttgcctgaatctcgccatcggtcaggtgtcgcctaataccctcaggcaactgctcggcactgctgtgttgtggaatgttgccaatggacaattccccactcataacgagattagtgcctgctacaaattgcaatattcaataaagaagggcgacagtgggtgtgtcaccatgaaggctgggaagcatggtgcgattgtggaggggctgttgtcctctgtgtacgcgtcgtggaggggcaaagttatgatagctagtaagggatggcgtaatgaggatttgccacctgtgtccagtaacttccaacctttgattccccaatcgaatgaattgaccgatctggagaggaagcgtattcagagggtcgtgaagtactttcgtaaggggacaaagcctgtgtctcgtgtgtgtcatctcggtgtgctggagaagtatgggttgagtaggaagccgattaagatgccggataacaaggccaaacagaagaagaagaagaagacgagtgtgtatgataagttgtcggatcatgacctcgttttggttctcgccaaggatgagctggaagcccagaggcatgacgttagtttgccctccggtgaaattttccgctgtgatggggaggttaatctccggattggtgtggacgaatttgatgaatttccgcgtagtttggcagattatatcggtatcgacctcgataacttggaggagtatatcggtagcgacctggataacttgcatatcgatgatacaggaggagtcaatgaaggggaggagggagaagatatcgaggagcagctcgatttggaagaggccacggatgaagagcaggatgttctgggcaagggacggacctctgttgccgagaagttggcagcgctgaagcgaaaggaagaggctgggctgaagaggggaaggattcaagaaagtggtggccagagggaagcgataactgaggttgtagtgcaggaagtgccggctcaggaagtgcaaggggaagggggtggtgatacggcaccacagaatgtcgctgagggtggccatgaaatagtgggggaagctacccctgtccaaccgacagttgcccaaaagaagagaaagctatcaaggctgggagatttgatgaagggggtgcaagaagtaataacggaggctgtagtgcaagaagtgcctgctcaggaagtgcaaggggaagggggtggggataccgcttgtgtggcggaggtctgggcaccacagaatgtcgctgagggtggccataaaatagtggaggaagaagatactgaggtgcagctcgatttggaagaggccacggatgaagagcaggatgttctgggcaagggacggacctctgctgccgagaagttggcagcgctgaagaggggaaggattcatgaaagtggtggcaagagggaagcgataacggaggttgtagtgcaagaagtgccggctcaggaagtgcaaggggaagggggtggtgatacggcaccacagaatgtcgttgagggtggccaaccgacagttgcccagaagaagagaaagctatcaaggctgggagatttgatgaagagggtgcaagaagtaataacggaggctgtagtgcaagaagtgccggctcaggaagtgcaaggggaagggggtggtgatacggcaccacagaatgtcgctgagggtggccatgaaatagtgggggaagctacccctgtccaaccgacagctgcccagaagaagagaaagctatcaaggctgggagatttgatgaaggatgctgcctcccggaagcttgccaggagtttgaggaagagaggtgtcgaggaagattgcattcctcatatggtagctgatttgcggcattgctcgcgagacctccctcttattgataccggtgacgagctggcggacttcactgtcgctcaggggacgttgatgagggctgtctgcatgaattaccgtgccggcaataagctaagggcttcgattgaggcggggaacaaattgcaggccgagttggatgcagagaaggaggcggggaacaaattacaggccgagttggatgccgagaaggcgtcggggaacaaattgcaggccgagttggatgccgagaaggaggcggggaacaaattgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_28

Protein Analysis

833

Amino Acids

90.55

Weight (kDa)

5.08

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2282
AccB1I GGYRCC 5 cut(s) 98, 1390, 1606, 1861, 2026
AccII CGCG 3 cut(s) 602, 1039, 2236
AccIII TCCGGA 1 cut(s) 1005
AclWI GGATC 2 cut(s) 202, 906
AcoI YGGCCR 6 cut(s) 184, 1309, 1414, 1630, 1885, 2050
AcsI RAATTY 3 cut(s) 975, 1022, 1031
AcuI CTGAAG 6 cut(s) 66, 219, 312, 1277, 1301, 1772
AcyI GRCGYC 2 cut(s) 99, 2441
AfaI GTAC 6 cut(s) 304, 314, 320, 368, 599, 749
AfeI AGCGCT 2 cut(s) 1254, 1749
AfiI CCNNNNNNNGG 7 cut(s) 59, 60, 244, 295, 296, 353, 913
AflIII ACRYGT 1 cut(s) 600
AgeI ACCGGT 1 cut(s) 2258
AgsI TTSAA 2 cut(s) 516, 1298
AjnI CCWGG 6 cut(s) 128, 181, 210, 352, 1101, 2162
AjuI GAANNNNNNNTTGG 4 cut(s) 452, 484, 672, 704
AleI CACNNNNGTG 1 cut(s) 440
Alw26I GTCTC 2 cut(s) 780, 2232
AlwI GGATC 2 cut(s) 202, 906
Aor13HI TCCGGA 1 cut(s) 1005
Aor51HI AGCGCT 2 cut(s) 1254, 1749
ApeKI GCWGC 8 cut(s) 56, 1171, 1250, 1666, 1730, 1745, 2093, 2144
ApoI RAATTY 3 cut(s) 975, 1022, 1031
ArsI GACNNNNNNTTYG 2 cut(s) 758, 790
AsiGI ACCGGT 1 cut(s) 2258
AspLEI GCGC 3 cut(s) 101, 1255, 1750
AspS9I GGNCC 3 cut(s) 5, 1227, 1722
AsuC2I CCSGG 2 cut(s) 239, 2152
AsuHPI GGTGA 9 cut(s) 259, 278, 292, 535, 983, 1394, 1865, 2030, 2273
AvaII GGWCC 3 cut(s) 5, 1227, 1722
AxyI CCTNAGG 1 cut(s) 419
BaeGI GKGCMC 1 cut(s) 1609
BaeI ACNNNNGTAYC 2 cut(s) 1647, 1680
BalI TGGCCA 6 cut(s) 186, 1311, 1416, 1632, 1887, 2052
BanI GGYRCC 5 cut(s) 98, 1390, 1606, 1861, 2026
BanII GRGCYC 1 cut(s) 54
BauI CACGAG 1 cut(s) 777
BbsI GAAGAC 2 cut(s) 207, 878
BbvCI CCTCAGC 3 cut(s) 1407, 1623, 2043
BbvI GCAGC 8 cut(s) 43, 1183, 1262, 1678, 1717, 1757, 2080, 2131
BccI CCATC 6 cut(s) 134, 155, 271, 401, 633, 983
BceAI ACGGC 4 cut(s) 293, 1404, 1875, 2040
BciT130I CCWGG 6 cut(s) 130, 183, 212, 354, 1103, 2164
BciVI GTATCC 1 cut(s) 1573
BclI TGATCA 1 cut(s) 175
BcnI CCSGG 2 cut(s) 239, 2152
BcoDI GTCTC 2 cut(s) 780, 2232
BfaI CTAG 1 cut(s) 630
BfmI CTRYAG 3 cut(s) 362, 1530, 1971
BfoI RGCGCY 3 cut(s) 102, 1256, 1751
BfuI GTATCC 1 cut(s) 1573
BglI GCCNNNNNGGC 1 cut(s) 2438
BisI GCNGC 9 cut(s) 57, 1172, 1251, 1667, 1731, 1746, 2094, 2145, 2225
BlsI GCNGC 9 cut(s) 58, 1173, 1252, 1668, 1732, 1747, 2095, 2146, 2226
BmcAI AGTACT 1 cut(s) 749
Bme1390I CCNGG 8 cut(s) 130, 183, 212, 239, 354, 1103, 2152, 2164
Bme18I GGWCC 3 cut(s) 5, 1227, 1722
BmgT120I GGNCC 3 cut(s) 5, 1227, 1722
BmiI GGNNCC 6 cut(s) 6, 100, 1392, 1608, 1863, 2028
BmrFI CCNGG 8 cut(s) 130, 183, 212, 239, 354, 1103, 2152, 2164
BmsI GCATC 5 cut(s) 825, 2131, 2377, 2419, 2461
BpiI GAAGAC 2 cut(s) 207, 878
BpmI CTGGAG 2 cut(s) 737, 821
Bpu10I CCTNAGC 9 cut(s) 1356, 1407, 1551, 1623, 1827, 1992, 2043, 2289, 2342
BpuMI CCSGG 2 cut(s) 239, 2152
Bsa29I ATCGAT 1 cut(s) 1119
BsaHI GRCGYC 2 cut(s) 99, 2441
BsaI GGTCTC 1 cut(s) 2232
BsaJI CCNNGG 4 cut(s) 129, 924, 1191, 1686
BsaWI WCCGGW 3 cut(s) 968, 1005, 2258
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 7 cut(s) 59, 60, 244, 295, 296, 353, 913
Bse118I RCCGGY 5 cut(s) 1351, 1822, 1987, 2258, 2330
Bse1I ACTGG 1 cut(s) 669
Bse21I CCTNAGG 1 cut(s) 419
Bse3DI GCAATG 1 cut(s) 2227
BseAI TCCGGA 1 cut(s) 1005
BseBI CCWGG 6 cut(s) 130, 183, 212, 354, 1103, 2164
BseCI ATCGAT 1 cut(s) 1119
BseDI CCNNGG 4 cut(s) 129, 924, 1191, 1686
BseLI CCNNNNNNNGG 7 cut(s) 59, 60, 244, 295, 296, 353, 913
BseMI GCAATG 1 cut(s) 2227
BseNI ACTGG 1 cut(s) 669
BseRI GAGGAG 4 cut(s) 1097, 1146, 1163, 1181
BseSI GKGCMC 1 cut(s) 1609
BseXI GCAGC 8 cut(s) 43, 1183, 1262, 1678, 1717, 1757, 2080, 2131
BseYI CCCAGC 6 cut(s) 102, 554, 1274, 1486, 1927, 2122
BsgI GTGCAG 2 cut(s) 1361, 1685
Bsh1236I CGCG 3 cut(s) 602, 1039, 2236
BshNI GGYRCC 5 cut(s) 98, 1390, 1606, 1861, 2026
BshTI ACCGGT 1 cut(s) 2258
BshVI ATCGAT 1 cut(s) 1119
BslFI GGGAC 7 cut(s) 76, 178, 243, 775, 1236, 1731, 2308
BslI CCNNNNNNNGG 7 cut(s) 59, 60, 244, 295, 296, 353, 913
BsmAI GTCTC 2 cut(s) 780, 2232
BsmFI GGGAC 7 cut(s) 76, 178, 243, 775, 1236, 1731, 2308
BsmI GAATGC 1 cut(s) 2199
Bso31I GGTCTC 1 cut(s) 2232
Bsp1286I GDGCHC 2 cut(s) 54, 1609
Bsp13I TCCGGA 1 cut(s) 1005
Bsp143I GATC 4 cut(s) 175, 207, 712, 898
Bsp68I TCGCGA 1 cut(s) 2236
BspDI ATCGAT 1 cut(s) 1119
BspEI TCCGGA 1 cut(s) 1005
BspFNI CGCG 3 cut(s) 602, 1039, 2236
BspHI TCATGA 2 cut(s) 901, 1768
BspLI GGNNCC 6 cut(s) 6, 100, 1392, 1608, 1863, 2028
BspPI GGATC 2 cut(s) 202, 906
BspQI GCTCTTC 3 cut(s) 42, 1194, 1689
BspT107I GGYRCC 5 cut(s) 98, 1390, 1606, 1861, 2026
BspTNI GGTCTC 1 cut(s) 2232
BsrDI GCAATG 1 cut(s) 2227
BsrFI RCCGGY 5 cut(s) 1351, 1822, 1987, 2258, 2330
BsrI ACTGG 1 cut(s) 669
BssAI RCCGGY 5 cut(s) 1351, 1822, 1987, 2258, 2330
BssECI CCNNGG 4 cut(s) 129, 924, 1191, 1686
BssMI GATC 4 cut(s) 175, 207, 712, 898
BssNI GRCGYC 2 cut(s) 99, 2441
BssSI CACGAG 1 cut(s) 777
BssT1I CCWWGG 1 cut(s) 924
Bst2BI CACGAG 1 cut(s) 777
Bst2UI CCWGG 6 cut(s) 130, 183, 212, 354, 1103, 2164
Bst4CI ACNGT 8 cut(s) 67, 339, 366, 533, 1456, 1897, 2284, 2327
BstACI GRCGYC 2 cut(s) 99, 2441
BstAPI GCANNNNNTGC 4 cut(s) 1348, 1543, 1819, 1984
BstDSI CCRYGG 2 cut(s) 1191, 1686
BstFNI CGCG 3 cut(s) 602, 1039, 2236
BstH2I RGCGCY 3 cut(s) 102, 1256, 1751
BstHHI GCGC 3 cut(s) 101, 1255, 1750
BstKTI GATC 4 cut(s) 178, 210, 715, 901
BstMAI GTCTC 2 cut(s) 780, 2232
BstMBI GATC 4 cut(s) 175, 207, 712, 898
BstNI CCWGG 6 cut(s) 130, 183, 212, 354, 1103, 2164
BstSCI CCNGG 8 cut(s) 128, 181, 210, 237, 352, 1101, 2150, 2162
BstSFI CTRYAG 3 cut(s) 362, 1530, 1971
BstSLI GKGCMC 1 cut(s) 1609
BstUI CGCG 3 cut(s) 602, 1039, 2236
BstV1I GCAGC 8 cut(s) 43, 1183, 1262, 1678, 1717, 1757, 2080, 2131
BstV2I GAAGAC 2 cut(s) 207, 878
BstX2I RGATCY 1 cut(s) 207
BstYI RGATCY 1 cut(s) 207
Bsu15I ATCGAT 1 cut(s) 1119
Bsu36I CCTNAGG 1 cut(s) 419
BsuI GTATCC 1 cut(s) 1573
BsuTUI ATCGAT 1 cut(s) 1119
BtgI CCRYGG 2 cut(s) 1191, 1686
BtgZI GCGATG 1 cut(s) 153
BtsI GCAGTG 1 cut(s) 435
BtsIMutI CAGTG 3 cut(s) 435, 538, 2280
BtuMI TCGCGA 1 cut(s) 2236
CciI TCATGA 2 cut(s) 901, 1768
CfoI GCGC 3 cut(s) 101, 1255, 1750
Cfr10I RCCGGY 5 cut(s) 1351, 1822, 1987, 2258, 2330
Cfr13I GGNCC 3 cut(s) 5, 1227, 1722
ClaI ATCGAT 1 cut(s) 1119
CseI GACGC 2 cut(s) 591, 2430
CsiI ACCWGGT 1 cut(s) 352
Csp6I GTAC 6 cut(s) 303, 313, 319, 367, 598, 748
CspAI ACCGGT 1 cut(s) 2258
CviAII CATG 9 cut(s) 193, 547, 563, 902, 950, 1418, 1769, 2054, 2317
CviQI GTAC 6 cut(s) 303, 313, 319, 367, 598, 748
DinI GGCGCC 1 cut(s) 100
DpnI GATC 4 cut(s) 177, 209, 714, 900
DpnII GATC 4 cut(s) 175, 207, 712, 898
DrdI GACNNNNNNGTC 1 cut(s) 2282
DseDI GACNNNNNNGTC 1 cut(s) 2282
EaeI YGGCCR 6 cut(s) 184, 1309, 1414, 1630, 1885, 2050
EciI GGCGGA 2 cut(s) 1610, 2288
Eco130I CCWWGG 1 cut(s) 924
Eco24I GRGCYC 1 cut(s) 54
Eco31I GGTCTC 1 cut(s) 2232
Eco32I GATATC 1 cut(s) 1162
Eco47I GGWCC 3 cut(s) 5, 1227, 1722
Eco47III AGCGCT 2 cut(s) 1254, 1749
Eco57I CTGAAG 6 cut(s) 66, 219, 312, 1277, 1301, 1772
Eco81I CCTNAGG 1 cut(s) 419
EcoO109I RGGNCCY 1 cut(s) 5
EcoRII CCWGG 6 cut(s) 128, 181, 210, 352, 1101, 2162
EcoRV GATATC 1 cut(s) 1162
EcoT14I CCWWGG 1 cut(s) 924
EcoT38I GRGCYC 1 cut(s) 54
EgeI GGCGCC 1 cut(s) 100
EheI GGCGCC 1 cut(s) 100
ErhI CCWWGG 1 cut(s) 924
FaeI CATG 9 cut(s) 196, 550, 566, 905, 953, 1421, 1772, 2057, 2320
FaqI GGGAC 7 cut(s) 76, 178, 243, 775, 1236, 1731, 2308
FatI CATG 9 cut(s) 192, 546, 562, 901, 949, 1417, 1768, 2053, 2316
FauI CCCGC 5 cut(s) 52, 61, 2353, 2395, 2479
FauNDI CATATG 1 cut(s) 2208
FbaI TGATCA 1 cut(s) 175
Fnu4HI GCNGC 9 cut(s) 57, 1172, 1251, 1667, 1731, 1746, 2094, 2145, 2225
FriOI GRGCYC 1 cut(s) 54
Fsp4HI GCNGC 9 cut(s) 57, 1172, 1251, 1667, 1731, 1746, 2094, 2145, 2225
FspBI CTAG 1 cut(s) 630
GlaI GCGC 3 cut(s) 100, 1254, 1749
GluI GCNGC 9 cut(s) 57, 1172, 1251, 1667, 1731, 1746, 2094, 2145, 2225
GsaI CCCAGC 6 cut(s) 106, 558, 1278, 1490, 1931, 2126
GsuI CTGGAG 2 cut(s) 737, 821
HaeII RGCGCY 3 cut(s) 102, 1256, 1751
HgaI GACGC 2 cut(s) 591, 2430
HhaI GCGC 3 cut(s) 101, 1255, 1750
Hin1I GRCGYC 2 cut(s) 99, 2441
Hin1II CATG 9 cut(s) 196, 550, 566, 905, 953, 1421, 1772, 2057, 2320
Hin6I GCGC 3 cut(s) 99, 1253, 1748
HinP1I GCGC 3 cut(s) 99, 1253, 1748
HindIII AAGCTT 2 cut(s) 251, 2156
HinfI GANTC 8 cut(s) 166, 234, 283, 385, 688, 1134, 1294, 1765
HphI GGTGA 9 cut(s) 259, 278, 292, 535, 983, 1394, 1865, 2030, 2273
Hpy166II GTNNAC 3 cut(s) 313, 598, 1018
Hpy188I TCNGA 2 cut(s) 735, 898
Hpy8I GTNNAC 3 cut(s) 313, 598, 1018
Hpy99I CGWCG 2 cut(s) 607, 2446
HpyCH4III ACNGT 8 cut(s) 67, 339, 366, 533, 1456, 1897, 2284, 2327
HpyCH4IV ACGT 2 cut(s) 954, 2297
HpySE526I ACGT 2 cut(s) 954, 2297
Hsp92I GRCGYC 2 cut(s) 99, 2441
Hsp92II CATG 9 cut(s) 196, 550, 566, 905, 953, 1421, 1772, 2057, 2320
HspAI GCGC 3 cut(s) 99, 1253, 1748
KasI GGCGCC 1 cut(s) 98
Kpn2I TCCGGA 1 cut(s) 1005
KroI GCCGGC 4 cut(s) 1351, 1822, 1987, 2330
KroNI GCCGGC 4 cut(s) 1353, 1824, 1989, 2332
Ksp22I TGATCA 1 cut(s) 175
Kzo9I GATC 4 cut(s) 175, 207, 712, 898
LguI GCTCTTC 3 cut(s) 42, 1194, 1689
LmnI GCTCC 1 cut(s) 1168
Lsp1109I GCAGC 8 cut(s) 43, 1183, 1262, 1678, 1717, 1757, 2080, 2131
LweI GCATC 5 cut(s) 825, 2131, 2377, 2419, 2461
MabI ACCWGGT 1 cut(s) 352
MaeI CTAG 1 cut(s) 630
MaeII ACGT 2 cut(s) 954, 2297
MaeIII GTNAC 6 cut(s) 20, 284, 339, 541, 671, 2261
MalI GATC 4 cut(s) 177, 209, 714, 900
MboI GATC 4 cut(s) 175, 207, 712, 898
MflI RGATCY 1 cut(s) 207
MhlI GDGCHC 2 cut(s) 54, 1609
MlsI TGGCCA 6 cut(s) 186, 1311, 1416, 1632, 1887, 2052
MluI ACGCGT 1 cut(s) 600
MluNI TGGCCA 6 cut(s) 186, 1311, 1416, 1632, 1887, 2052
Mly113I GGCGCC 1 cut(s) 99
MlyI GAGTC 3 cut(s) 160, 292, 1143
MmeI TCCRAC 7 cut(s) 703, 876, 1471, 2107, 2364, 2406, 2448
Mox20I TGGCCA 6 cut(s) 186, 1311, 1416, 1632, 1887, 2052
MroI TCCGGA 1 cut(s) 1005
MroNI GCCGGC 4 cut(s) 1351, 1822, 1987, 2330
MscI TGGCCA 6 cut(s) 186, 1311, 1416, 1632, 1887, 2052
MseI TTAA 2 cut(s) 831, 999
MslI CAYNNNNRTG 4 cut(s) 440, 792, 1119, 1773
Msp20I TGGCCA 6 cut(s) 186, 1311, 1416, 1632, 1887, 2052
MspA1I CMGCKG 4 cut(s) 56, 106, 984, 2093
MspR9I CCNGG 8 cut(s) 130, 183, 212, 239, 354, 1103, 2152, 2164
Mva1269I GAATGC 1 cut(s) 2199
MvaI CCWGG 6 cut(s) 130, 183, 212, 354, 1103, 2164
MvnI CGCG 3 cut(s) 602, 1039, 2236
NaeI GCCGGC 4 cut(s) 1353, 1824, 1989, 2332
NarI GGCGCC 1 cut(s) 99
NciI CCSGG 2 cut(s) 239, 2152
NdeI CATATG 1 cut(s) 2208
NdeII GATC 4 cut(s) 175, 207, 712, 898
NgoMIV GCCGGC 4 cut(s) 1351, 1822, 1987, 2330
NlaIII CATG 9 cut(s) 196, 550, 566, 905, 953, 1421, 1772, 2057, 2320
NlaIV GGNNCC 6 cut(s) 6, 100, 1392, 1608, 1863, 2028
NmeAIII GCCGAG 8 cut(s) 411, 1264, 1759, 2404, 2446, 2458, 2488, 2500
NmuCI GTSAC 4 cut(s) 284, 339, 541, 2261
NruI TCGCGA 1 cut(s) 2236
OliI CACNNNNGTG 1 cut(s) 440
PagI TCATGA 2 cut(s) 901, 1768
PciSI GCTCTTC 3 cut(s) 42, 1194, 1689
PcsI WCGNNNNNNNCGW 1 cut(s) 262
PctI GAATGC 1 cut(s) 2199
PdiI GCCGGC 4 cut(s) 1353, 1824, 1989, 2332
PfeI GAWTC 5 cut(s) 234, 385, 688, 1294, 1765
PfoI TCCNGGA 3 cut(s) 210, 237, 2150
PinAI ACCGGT 1 cut(s) 2258
PkrI GCNGC 9 cut(s) 58, 1173, 1252, 1668, 1732, 1747, 2095, 2146, 2226
PleI GAGTC 3 cut(s) 160, 291, 1142
PluTI GGCGCC 1 cut(s) 102
PpsI GAGTC 3 cut(s) 160, 291, 1142
PpuMI RGGWCCY 1 cut(s) 5
Psp5II RGGWCCY 1 cut(s) 5
Psp6I CCWGG 6 cut(s) 128, 181, 210, 352, 1101, 2162
PspFI CCCAGC 6 cut(s) 102, 554, 1274, 1486, 1927, 2122
PspGI CCWGG 6 cut(s) 128, 181, 210, 352, 1101, 2162
PspN4I GGNNCC 6 cut(s) 6, 100, 1392, 1608, 1863, 2028
PspPI GGNCC 3 cut(s) 5, 1227, 1722
PspPPI RGGWCCY 1 cut(s) 5
PsuI RGATCY 1 cut(s) 207
PvuII CAGCTG 2 cut(s) 106, 2093
RruI TCGCGA 1 cut(s) 2236
RsaI GTAC 6 cut(s) 304, 314, 320, 368, 599, 749
RsaNI GTAC 6 cut(s) 303, 313, 319, 367, 598, 748
RseI CAYNNNNRTG 4 cut(s) 440, 792, 1119, 1773
SapI GCTCTTC 3 cut(s) 42, 1194, 1689
SaqAI TTAA 2 cut(s) 831, 999
SatI GCNGC 9 cut(s) 57, 1172, 1251, 1667, 1731, 1746, 2094, 2145, 2225
Sau3AI GATC 4 cut(s) 175, 207, 712, 898
Sau96I GGNCC 3 cut(s) 5, 1227, 1722
ScaI AGTACT 1 cut(s) 749
SchI GAGTC 3 cut(s) 160, 292, 1143
ScrFI CCNGG 8 cut(s) 130, 183, 212, 239, 354, 1103, 2152, 2164
SduI GDGCHC 2 cut(s) 54, 1609
SexAI ACCWGGT 1 cut(s) 352
SfaNI GCATC 5 cut(s) 825, 2131, 2377, 2419, 2461
SfcI CTRYAG 3 cut(s) 362, 1530, 1971
SfoI GGCGCC 1 cut(s) 100
SinI GGWCC 3 cut(s) 5, 1227, 1722
SmiMI CAYNNNNRTG 4 cut(s) 440, 792, 1119, 1773
SspDI GGCGCC 1 cut(s) 98
SspI AATATT 1 cut(s) 512
SspMI CTAG 1 cut(s) 630
StyD4I CCNGG 8 cut(s) 128, 181, 210, 237, 352, 1101, 2150, 2162
StyI CCWWGG 1 cut(s) 924
TaaI ACNGT 8 cut(s) 67, 339, 366, 533, 1456, 1897, 2284, 2327
TaiI ACGT 2 cut(s) 957, 2300
TaqI TCGA 9 cut(s) 698, 1065, 1071, 1119, 1164, 1176, 1671, 2187, 2351
TaqII GACCGA 2 cut(s) 386, 725
TatI WGTACW 3 cut(s) 302, 366, 747
TauI GCSGC 1 cut(s) 2227
TfiI GAWTC 5 cut(s) 234, 385, 688, 1294, 1765
Tru1I TTAA 2 cut(s) 831, 999
Tru9I TTAA 2 cut(s) 831, 999
TscAI CASTG 3 cut(s) 442, 538, 2287
TseFI GTSAC 4 cut(s) 284, 339, 541, 2261
TseI GCWGC 8 cut(s) 56, 1171, 1250, 1666, 1730, 1745, 2093, 2144
Tsp45I GTSAC 4 cut(s) 284, 339, 541, 2261
TspGWI ACGGA 7 cut(s) 1208, 1240, 1538, 1703, 1735, 1814, 1979
TspRI CASTG 3 cut(s) 442, 538, 2287
VpaK11BI GGWCC 3 cut(s) 5, 1227, 1722
XapI RAATTY 3 cut(s) 975, 1022, 1031
XcmI CCANNNNNNNNNTGG 1 cut(s) 931
XspI CTAG 1 cut(s) 630
ZrmI AGTACT 1 cut(s) 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.