Rmu_sc0007647.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007647.1
OG0000075
Physical Location & Seq
Reverse (-)
36257 .. 39111
2855 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007647.1_g000004.1.cds

Sequence Viewer

Length: 1734 bp
atgatgcaagataccaggctgaccccgatagaggagaagcatattatgagggtcttgagcaagttcctgaagggaagaggggtcgacatgcccagcgagtctgccactaagagtgatgcccattatgctgaggtgaatactgacgtcatcatcgaggagttattgaaagacttggaggtggtgaggcgttgcaatgtggatttagtagacaagagagtatatgagactgagcattgggtaagcaagcagttgcccgatgaagtgtatcagaggttccccgatattatgcttgaatatcttaatagtcggtggttatatgttgaggcgctggtgggagtcggtgagcgaggcaaggcagtgttctcgggcaccagtagggtgagagggacagtccccttgagttctaagggagggcgtgcgtgcttcagaggctccgatagaggggaatgtgcctgctattgcctgagttgggggggagtctcccagtactcgtgtggagggagacgacctcagtgtcgagcaaagtgtctgagatgccgcagggcagcgggcggtgcccttggaggtggagatttctgtggtggaattattagaagaaacggagcgtcgccagaacgataccagtgctacggttctcctagtggaggacgtggtgttcaaacaattggaggatggcggcggtcgaggttggtggcgctcagtgaggccctagagagggtggatatgatgaaggcatccaggtgcccaaggttgaagaaaagaacggcgtcacaacttcgtctagggagtccctctgtgggtgtgagggtcgatacttatgggggaaagaggtcccaagttgggaggtggtacgttcgcgctcggcgagtgaaggttctcgccactcttgggacgaggttgtcggaggtccctcctggactctgggcgagattggcgttgctgatggtgcgatcgtccatatggtggcggatctgcgcaactgacattgtgaccgcgatcgcgttaacgtggatgatcctcgccaatggtaagttgaatgccaagagggagcgagcacatgagctccagggtttgttacatcgcggccgagttgatcatgaggagatgaggtgggcgattgacgaagggattgcgagaaggatggagttggagtggtcgctggcagtgggtttaaaggcattggaggaggtaagagtgcaggtccgcactgctgaagagcggctgcgagaattggagaggcaagttcaagaccgtgatgcaaagttggagcttcgcggggcagccttaaagagtttagctccttatcctaatcgcgtggttgaattggaggggcaactcggtgcttggcaaggaaaggttgaccttacgagggttattgagcgccagactggtgagaatgatgcggagttggagcgattaaggaaggaaatggacgaggagcgttctcgggctagtaccttcgccgatgattgcattcatttgcgggccgcggttgagacgcaccttgacaaactccataaagccaagcgagacagtgtagcaaaggctatgaattattatcttctgtcgtccaacattaaggataagataaacaatgccttctcgaatggagccttgcatttgatccgcgacaatattgacattgggtggattgatcacgacaagatggtccgcgatatgcaagcgacaaaggtggcaatatcacaggccagcgtcgcgagtggtggtcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

577

Amino Acids

64.96

Weight (kDa)

9.6

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 513, 898, 1667
AatII GACGTC 1 cut(s) 147
Acc16I TGCGCA 1 cut(s) 976
Acc36I ACCTGC 1 cut(s) 1189
AccB1I GGYRCC 3 cut(s) 368, 554, 741
AccB7I CCANNNNNTGG 1 cut(s) 963
AccBSI CCGCTC 1 cut(s) 1219
AccI GTMKAC 2 cut(s) 84, 207
AclWI GGATC 3 cut(s) 977, 1009, 1618
AcoI YGGCCR 1 cut(s) 1084
AcuI CTGAAG 3 cut(s) 89, 409, 1233
AcyI GRCGYC 2 cut(s) 144, 767
AfaI GTAC 3 cut(s) 488, 851, 1456
AgsI TTSAA 7 cut(s) 166, 293, 659, 754, 1036, 1247, 1322
AjiI CACGTC 1 cut(s) 650
AjnI CCWGG 4 cut(s) 14, 737, 913, 1065
AloI GAACNNNNNNTCC 2 cut(s) 639, 671
AluBI AGCT 3 cut(s) 1063, 1270, 1298
AluI AGCT 3 cut(s) 1063, 1270, 1298
Alw21I GWGCWC 2 cut(s) 1057, 1065
Alw26I GTCTC 5 cut(s) 218, 484, 496, 1490, 1524
AlwI GGATC 3 cut(s) 977, 1009, 1618
Ama87I CYCGRG 2 cut(s) 364, 1446
AoxI GGCC 4 cut(s) 705, 1084, 1485, 1707
ApeKI GCWGC 3 cut(s) 545, 1222, 1280
AsiSI GCGATCGC 1 cut(s) 999
AspLEI GCGC 5 cut(s) 328, 697, 860, 977, 1383
AspS9I GGNCC 6 cut(s) 706, 831, 907, 1201, 1485, 1669
AsuHPI GGTGA 5 cut(s) 145, 193, 353, 391, 1403
AvaI CYCGRG 2 cut(s) 364, 1446
AvaII GGWCC 4 cut(s) 831, 907, 1201, 1669
BaeGI GKGCMC 3 cut(s) 371, 559, 746
BanI GGYRCC 3 cut(s) 368, 554, 741
BanII GRGCYC 1 cut(s) 1065
BauI CACGAG 1 cut(s) 490
Bbv12I GWGCWC 2 cut(s) 1057, 1065
BbvCI CCTCAGC 1 cut(s) 129
BbvI GCAGC 3 cut(s) 557, 1209, 1292
BccI CCATC 4 cut(s) 666, 937, 1135, 1660
BceAI ACGGC 1 cut(s) 780
BcgI CGANNNNNNTGC 6 cut(s) 345, 379, 606, 640, 1112, 1146
BciT130I CCWGG 4 cut(s) 16, 739, 915, 1067
BclI TGATCA 2 cut(s) 1093, 1654
BcoDI GTCTC 5 cut(s) 218, 484, 496, 1490, 1524
BfaI CTAG 5 cut(s) 639, 710, 782, 1452, 1732
BfoI RGCGCY 3 cut(s) 329, 698, 1384
BfuAI ACCTGC 1 cut(s) 1189
BisI GCNGC 8 cut(s) 538, 546, 677, 1084, 1220, 1223, 1281, 1488
BlsI GCNGC 8 cut(s) 539, 547, 678, 1085, 1221, 1224, 1282, 1489
BmcAI AGTACT 1 cut(s) 488
Bme1390I CCNGG 4 cut(s) 16, 739, 915, 1067
Bme18I GGWCC 4 cut(s) 831, 907, 1201, 1669
BmeT110I CYCGRG 2 cut(s) 364, 1446
BmgBI CACGTC 1 cut(s) 650
BmgT120I GGNCC 6 cut(s) 706, 831, 907, 1201, 1485, 1669
BmiI GGNNCC 8 cut(s) 275, 370, 433, 556, 743, 833, 909, 1612
BmrFI CCNGG 4 cut(s) 16, 739, 915, 1067
BmrI ACTGGG 1 cut(s) 478
BmsI GCATC 5 cut(s) 106, 524, 743, 1246, 1390
BmuI ACTGGG 1 cut(s) 478
BplI GAGNNNNNCTC 4 cut(s) 493, 525, 1282, 1314
BpmI CTGGAG 1 cut(s) 1049
Bpu10I CCTNAGC 1 cut(s) 129
BpuEI CTTGAG 2 cut(s) 76, 418
BsaHI GRCGYC 2 cut(s) 144, 767
BsaJI CCNNGG 4 cut(s) 559, 746, 1066, 1488
BsaXI ACNNNNNCTCC 6 cut(s) 1047, 1077, 1094, 1124, 1136, 1166
Bse1I ACTGG 4 cut(s) 372, 484, 622, 1393
Bse3DI GCAATG 1 cut(s) 199
BseBI CCWGG 4 cut(s) 16, 739, 915, 1067
BseDI CCNNGG 4 cut(s) 559, 746, 1066, 1488
BseGI GGATG 4 cut(s) 677, 734, 1017, 1146
BseMI GCAATG 1 cut(s) 199
BseMII CTCAG 6 cut(s) 120, 219, 455, 521, 524, 712
BseNI ACTGG 4 cut(s) 372, 484, 622, 1393
BseRI GAGGAG 5 cut(s) 47, 170, 1115, 1199, 1451
BseSI GKGCMC 3 cut(s) 371, 559, 746
BseX3I CGGCCG 1 cut(s) 1084
BseXI GCAGC 3 cut(s) 557, 1209, 1292
BseYI CCCAGC 1 cut(s) 92
BsgI GTGCAG 1 cut(s) 1217
Bsh1285I CGRYCG 4 cut(s) 683, 953, 999, 1087
BshFI GGCC 4 cut(s) 707, 1086, 1487, 1709
BshNI GGYRCC 3 cut(s) 368, 554, 741
BsiEI CGRYCG 4 cut(s) 683, 953, 999, 1087
BsiHKAI GWGCWC 2 cut(s) 1057, 1065
BsiHKCI CYCGRG 2 cut(s) 364, 1446
BslFI GGGAC 6 cut(s) 377, 400, 774, 817, 893, 904
BsmAI GTCTC 5 cut(s) 218, 484, 496, 1490, 1524
BsmBI CGTCTC 2 cut(s) 496, 1490
BsmFI GGGAC 6 cut(s) 377, 400, 774, 817, 893, 904
BsmI GAATGC 2 cut(s) 1042, 1473
BsnI GGCC 4 cut(s) 707, 1086, 1487, 1709
BsoBI CYCGRG 2 cut(s) 364, 1446
Bsp1286I GDGCHC 5 cut(s) 371, 559, 746, 1057, 1065
Bsp143I GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
Bsp68I TCGCGA 1 cut(s) 1718
BspANI GGCC 4 cut(s) 707, 1086, 1487, 1709
BspCNI CTCAG 6 cut(s) 121, 220, 456, 522, 523, 711
BspHI TCATGA 1 cut(s) 1096
BspLI GGNNCC 8 cut(s) 275, 370, 433, 556, 743, 833, 909, 1612
BspMI ACCTGC 1 cut(s) 1189
BspPI GGATC 3 cut(s) 977, 1009, 1618
BspQI GCTCTTC 1 cut(s) 1209
BspT107I GGYRCC 3 cut(s) 368, 554, 741
BsrBI CCGCTC 1 cut(s) 1219
BsrDI GCAATG 1 cut(s) 199
BsrI ACTGG 4 cut(s) 372, 484, 622, 1393
BssECI CCNNGG 4 cut(s) 559, 746, 1066, 1488
BssMI GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
BssNI GRCGYC 2 cut(s) 144, 767
BssSI CACGAG 1 cut(s) 490
BssT1I CCWWGG 2 cut(s) 559, 746
Bst2BI CACGAG 1 cut(s) 490
Bst2UI CCWGG 4 cut(s) 16, 739, 915, 1067
Bst4CI ACNGT 4 cut(s) 391, 632, 1253, 1535
Bst6I CTCTTC 2 cut(s) 70, 1209
BstACI GRCGYC 2 cut(s) 144, 767
BstDEI CTNAG 8 cut(s) 108, 129, 228, 405, 464, 510, 530, 698
BstDSI CCRYGG 1 cut(s) 1488
BstENI CCTNNNNNAGG 1 cut(s) 642
BstF5I GGATG 4 cut(s) 677, 734, 1017, 1146
BstH2I RGCGCY 3 cut(s) 329, 698, 1384
BstHHI GCGC 5 cut(s) 328, 697, 860, 977, 1383
BstKTI GATC 7 cut(s) 953, 972, 999, 1017, 1096, 1626, 1657
BstMAI GTCTC 5 cut(s) 218, 484, 496, 1490, 1524
BstMBI GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
BstMCI CGRYCG 4 cut(s) 683, 953, 999, 1087
BstMWI GCNNNNNNNGC 6 cut(s) 125, 429, 554, 932, 946, 1715
BstNI CCWGG 4 cut(s) 16, 739, 915, 1067
BstNSI RCATGY 1 cut(s) 91
BstSCI CCNGG 4 cut(s) 14, 737, 913, 1065
BstSLI GKGCMC 3 cut(s) 371, 559, 746
BstV1I GCAGC 3 cut(s) 557, 1209, 1292
BstX2I RGATCY 1 cut(s) 969
BstYI RGATCY 1 cut(s) 969
BstZI CGGCCG 1 cut(s) 1084
BsuRI GGCC 4 cut(s) 707, 1086, 1487, 1709
BtgI CCRYGG 1 cut(s) 1488
BtgZI GCGATG 1 cut(s) 1064
BtrI CACGTC 1 cut(s) 650
BtsCI GGATG 4 cut(s) 677, 734, 1017, 1146
BtsI GCAGTG 3 cut(s) 363, 1170, 1206
BtsIMutI CAGTG 7 cut(s) 363, 518, 629, 706, 1170, 1206, 1540
BtuMI TCGCGA 1 cut(s) 1718
BveI ACCTGC 1 cut(s) 1189
CciI TCATGA 1 cut(s) 1096
CfoI GCGC 5 cut(s) 328, 697, 860, 977, 1383
Cfr13I GGNCC 6 cut(s) 706, 831, 907, 1201, 1485, 1669
Cfr42I CCGCGG 1 cut(s) 1491
CseI GACGC 4 cut(s) 594, 756, 1507, 1702
Csp6I GTAC 3 cut(s) 487, 850, 1455
CviAII CATG 3 cut(s) 88, 1058, 1097
CviQI GTAC 3 cut(s) 487, 850, 1455
DdeI CTNAG 8 cut(s) 108, 129, 228, 405, 464, 510, 530, 698
DpnI GATC 7 cut(s) 952, 971, 998, 1016, 1095, 1625, 1656
DpnII GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
DraI TTTAAA 1 cut(s) 1173
DrdI GACNNNNNNGTC 3 cut(s) 513, 898, 1667
DseDI GACNNNNNNGTC 3 cut(s) 513, 898, 1667
EaeI YGGCCR 1 cut(s) 1084
EagI CGGCCG 1 cut(s) 1084
Eam1104I CTCTTC 2 cut(s) 70, 1209
EarI CTCTTC 2 cut(s) 70, 1209
EciI GGCGGA 1 cut(s) 982
Ecl136II GAGCTC 1 cut(s) 1063
EclXI CGGCCG 1 cut(s) 1084
Eco130I CCWWGG 2 cut(s) 559, 746
Eco24I GRGCYC 1 cut(s) 1065
Eco47I GGWCC 4 cut(s) 831, 907, 1201, 1669
Eco52I CGGCCG 1 cut(s) 1084
Eco53kI GAGCTC 1 cut(s) 1063
Eco57I CTGAAG 3 cut(s) 89, 409, 1233
Eco88I CYCGRG 2 cut(s) 364, 1446
EcoICRI GAGCTC 1 cut(s) 1063
EcoNI CCTNNNNNAGG 1 cut(s) 642
EcoO109I RGGNCCY 3 cut(s) 706, 831, 907
EcoRII CCWGG 4 cut(s) 14, 737, 913, 1065
EcoT14I CCWWGG 2 cut(s) 559, 746
EcoT38I GRGCYC 1 cut(s) 1065
ErhI CCWWGG 2 cut(s) 559, 746
Esp3I CGTCTC 2 cut(s) 496, 1490
FaeI CATG 3 cut(s) 91, 1061, 1100
FaqI GGGAC 6 cut(s) 377, 400, 774, 817, 893, 904
FatI CATG 3 cut(s) 87, 1057, 1096
FauI CCCGC 3 cut(s) 541, 1268, 1476
FauNDI CATATG 1 cut(s) 959
FbaI TGATCA 2 cut(s) 1093, 1654
FblI GTMKAC 2 cut(s) 84, 207
Fnu4HI GCNGC 8 cut(s) 538, 546, 677, 1084, 1220, 1223, 1281, 1488
FokI GGATG 4 cut(s) 684, 721, 1024, 1153
FriOI GRGCYC 1 cut(s) 1065
Fsp4HI GCNGC 8 cut(s) 538, 546, 677, 1084, 1220, 1223, 1281, 1488
FspBI CTAG 5 cut(s) 639, 710, 782, 1452, 1732
FspI TGCGCA 1 cut(s) 976
GlaI GCGC 5 cut(s) 327, 696, 859, 976, 1382
GluI GCNGC 8 cut(s) 538, 546, 677, 1084, 1220, 1223, 1281, 1488
GsaI CCCAGC 1 cut(s) 96
GsuI CTGGAG 1 cut(s) 1049
HaeII RGCGCY 3 cut(s) 329, 698, 1384
HaeIII GGCC 4 cut(s) 707, 1086, 1487, 1709
HgaI GACGC 4 cut(s) 594, 756, 1507, 1702
HhaI GCGC 5 cut(s) 328, 697, 860, 977, 1383
Hin1I GRCGYC 2 cut(s) 144, 767
Hin1II CATG 3 cut(s) 91, 1061, 1100
Hin6I GCGC 5 cut(s) 326, 695, 858, 975, 1381
HinP1I GCGC 5 cut(s) 326, 695, 858, 975, 1381
HincII GTYRAC 3 cut(s) 85, 1005, 1360
HindII GTYRAC 3 cut(s) 85, 1005, 1360
HinfI GANTC 5 cut(s) 98, 336, 477, 787, 918
HpaI GTTAAC 1 cut(s) 1005
HphI GGTGA 5 cut(s) 145, 193, 353, 391, 1403
Hpy166II GTNNAC 4 cut(s) 85, 208, 1005, 1360
Hpy188I TCNGA 5 cut(s) 270, 428, 436, 531, 904
Hpy188III TCNNGA 7 cut(s) 55, 67, 1097, 1247, 1603, 1658, 1717
Hpy8I GTNNAC 4 cut(s) 85, 208, 1005, 1360
Hpy99I CGWCG 2 cut(s) 610, 1718
HpyAV CCTTC 8 cut(s) 64, 724, 865, 1118, 1131, 1417, 1468, 1609
HpyCH4III ACNGT 4 cut(s) 391, 632, 1253, 1535
HpyCH4IV ACGT 4 cut(s) 144, 649, 852, 1007
HpyCH4V TGCA 7 cut(s) 7, 192, 1198, 1259, 1473, 1618, 1681
HpyF10VI GCNNNNNNNGC 6 cut(s) 125, 429, 554, 932, 946, 1715
HpyF3I CTNAG 8 cut(s) 108, 129, 228, 405, 464, 510, 530, 698
HpySE526I ACGT 4 cut(s) 144, 649, 852, 1007
Hsp92I GRCGYC 2 cut(s) 144, 767
Hsp92II CATG 3 cut(s) 91, 1061, 1100
HspAI GCGC 5 cut(s) 326, 695, 858, 975, 1381
Ksp22I TGATCA 2 cut(s) 1093, 1654
KspAI GTTAAC 1 cut(s) 1005
KspI CCGCGG 1 cut(s) 1491
Kzo9I GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
LguI GCTCTTC 1 cut(s) 1209
LmnI GCTCC 9 cut(s) 437, 602, 1048, 1068, 1267, 1303, 1411, 1438, 1610
Lsp1109I GCAGC 3 cut(s) 557, 1209, 1292
LweI GCATC 5 cut(s) 106, 524, 743, 1246, 1390
MaeI CTAG 5 cut(s) 639, 710, 782, 1452, 1732
MaeII ACGT 4 cut(s) 144, 649, 852, 1007
MaeIII GTNAC 3 cut(s) 768, 988, 1074
MalI GATC 7 cut(s) 952, 971, 998, 1016, 1095, 1625, 1656
MbiI CCGCTC 1 cut(s) 1219
MboI GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
MboII GAAGA 5 cut(s) 87, 606, 766, 1226, 1553
MfeI CAATTG 1 cut(s) 663
MflI RGATCY 1 cut(s) 969
MhlI GDGCHC 5 cut(s) 371, 559, 746, 1057, 1065
MluCI AATT 5 cut(s) 585, 663, 1229, 1322, 1552
MlyI GAGTC 5 cut(s) 107, 345, 486, 796, 912
MmeI TCCRAC 5 cut(s) 882, 1128, 1245, 1389, 1596
MseI TTAA 6 cut(s) 300, 1004, 1172, 1286, 1418, 1578
MslI CAYNNNNRTG 1 cut(s) 739
MspA1I CMGCKG 2 cut(s) 548, 1490
MspR9I CCNGG 4 cut(s) 16, 739, 915, 1067
MunI CAATTG 1 cut(s) 663
Mva1269I GAATGC 2 cut(s) 1042, 1473
MvaI CCWGG 4 cut(s) 16, 739, 915, 1067
MwoI GCNNNNNNNGC 6 cut(s) 125, 429, 554, 932, 946, 1715
NdeI CATATG 1 cut(s) 959
NdeII GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
NlaIII CATG 3 cut(s) 91, 1061, 1100
NlaIV GGNNCC 8 cut(s) 275, 370, 433, 556, 743, 833, 909, 1612
NmeAIII GCCGAG 2 cut(s) 841, 1112
NmuCI GTSAC 2 cut(s) 768, 988
NruI TCGCGA 1 cut(s) 1718
NsbI TGCGCA 1 cut(s) 976
NspI RCATGY 1 cut(s) 91
PagI TCATGA 1 cut(s) 1096
PciSI GCTCTTC 1 cut(s) 1209
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 862
PctI GAATGC 2 cut(s) 1042, 1473
PflMI CCANNNNNTGG 1 cut(s) 963
PfoI TCCNGGA 1 cut(s) 913
PkrI GCNGC 8 cut(s) 539, 547, 678, 1085, 1221, 1224, 1282, 1489
Ple19I CGATCG 2 cut(s) 953, 999
PleI GAGTC 5 cut(s) 106, 344, 485, 795, 912
PpsI GAGTC 5 cut(s) 106, 344, 485, 795, 912
PpuMI RGGWCCY 2 cut(s) 831, 907
Psp124BI GAGCTC 1 cut(s) 1065
Psp5II RGGWCCY 2 cut(s) 831, 907
Psp6I CCWGG 4 cut(s) 14, 737, 913, 1065
PspFI CCCAGC 1 cut(s) 92
PspGI CCWGG 4 cut(s) 14, 737, 913, 1065
PspN4I GGNNCC 8 cut(s) 275, 370, 433, 556, 743, 833, 909, 1612
PspPI GGNCC 6 cut(s) 706, 831, 907, 1201, 1485, 1669
PspPPI RGGWCCY 2 cut(s) 831, 907
PsrI GAACNNNNNNTAC 2 cut(s) 257, 289
PsuI RGATCY 1 cut(s) 969
PvuI CGATCG 2 cut(s) 953, 999
RgaI GCGATCGC 1 cut(s) 999
RruI TCGCGA 1 cut(s) 1718
RsaI GTAC 3 cut(s) 488, 851, 1456
RsaNI GTAC 3 cut(s) 487, 850, 1455
RseI CAYNNNNRTG 1 cut(s) 739
SacI GAGCTC 1 cut(s) 1065
SacII CCGCGG 1 cut(s) 1491
SalI GTCGAC 1 cut(s) 83
SapI GCTCTTC 1 cut(s) 1209
SaqAI TTAA 6 cut(s) 300, 1004, 1172, 1286, 1418, 1578
SatI GCNGC 8 cut(s) 538, 546, 677, 1084, 1220, 1223, 1281, 1488
Sau3AI GATC 7 cut(s) 950, 969, 996, 1014, 1093, 1623, 1654
Sau96I GGNCC 6 cut(s) 706, 831, 907, 1201, 1485, 1669
ScaI AGTACT 1 cut(s) 488
SchI GAGTC 5 cut(s) 107, 345, 486, 796, 912
ScrFI CCNGG 4 cut(s) 16, 739, 915, 1067
SduI GDGCHC 5 cut(s) 371, 559, 746, 1057, 1065
SfaAI GCGATCGC 1 cut(s) 999
SfaNI GCATC 5 cut(s) 106, 524, 743, 1246, 1390
Sfr303I CCGCGG 1 cut(s) 1491
SgfI GCGATCGC 1 cut(s) 999
SgrBI CCGCGG 1 cut(s) 1491
SinI GGWCC 4 cut(s) 831, 907, 1201, 1669
SmiMI CAYNNNNRTG 1 cut(s) 739
SmlI CTYRAG 2 cut(s) 55, 397
SmoI CTYRAG 2 cut(s) 55, 397
Sse9I AATT 5 cut(s) 585, 663, 1229, 1322, 1552
SspI AATATT 1 cut(s) 1636
SspMI CTAG 5 cut(s) 639, 710, 782, 1452, 1732
SstI GAGCTC 1 cut(s) 1065
StyD4I CCNGG 4 cut(s) 14, 737, 913, 1065
StyI CCWWGG 2 cut(s) 559, 746
TaaI ACNGT 4 cut(s) 391, 632, 1253, 1535
TaiI ACGT 4 cut(s) 147, 652, 855, 1010
TaqI TCGA 6 cut(s) 84, 153, 517, 683, 810, 1604
TasI AATT 5 cut(s) 585, 663, 1229, 1322, 1552
TatI WGTACW 1 cut(s) 486
TauI GCSGC 5 cut(s) 540, 679, 1086, 1222, 1490
Tru1I TTAA 6 cut(s) 300, 1004, 1172, 1286, 1418, 1578
Tru9I TTAA 6 cut(s) 300, 1004, 1172, 1286, 1418, 1578
TscAI CASTG 7 cut(s) 363, 518, 629, 706, 1170, 1213, 1540
TseFI GTSAC 2 cut(s) 768, 988
TseI GCWGC 3 cut(s) 545, 1222, 1280
Tsp45I GTSAC 2 cut(s) 768, 988
TspDTI ATGAA 4 cut(s) 273, 743, 1466, 1565
TspGWI ACGGA 1 cut(s) 615
TspRI CASTG 7 cut(s) 363, 518, 629, 706, 1170, 1213, 1540
Van91I CCANNNNNTGG 1 cut(s) 963
VpaK11BI GGWCC 4 cut(s) 831, 907, 1201, 1669
XagI CCTNNNNNAGG 1 cut(s) 642
XceI RCATGY 1 cut(s) 91
XcmI CCANNNNNNNNNTGG 1 cut(s) 491
XmiI GTMKAC 2 cut(s) 84, 207
XspI CTAG 5 cut(s) 639, 710, 782, 1452, 1732
ZraI GACGTC 1 cut(s) 145
ZrmI AGTACT 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.