Rmu_ssc0000127.1_g000018

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000127.1
OG0000075
Physical Location & Seq
Reverse (-)
38260 .. 44214
5955 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000127.1_g000018.1.cds

Sequence Viewer

Length: 2043 bp
atgcctttatctcagactcaaaactctactctcggtcgagtgaccgaacaatgcccagtcatacgactcaaaactataatctcggtcgataagagcttagtaggtcgacgggcaaaaaacaggtgcaaacaggccgaggatgatatcgctccattgagggagtcaaacttggagcttaccgggaagttgcaacaggtggaggatggacttagaaaggcatatccgagaacgcgatgtcgagttggagcttcaggcggctgccttggagagtttggctccatatcccatcatgtggtgggtttggagaggcaggttggtaatctgcaaagggaagttgaccgtctacgcgatgttaagcttgaagcaggcaagaaagaggcagagatggagcggcttaggaaggagttggtcgagcaccagattcagtcgtgtaacttttccgaagaatgcattcgtctgcgcgttgcttccgagacacatcgggacaagctcagcaaggccagtcgtgatggggcagacaaggaggtggatctccatcttcggtcaagcgattttcaagagaagatgaacaacgccttctcggatggggtcttgcactcgattcgagatggtatcactgctgggtggattgatcaggagaagatggtgcgcaacatgcatgccaagaaagcagcgaggtcgcaagccagtgcagcgagtggtggtcgaagttctgggatcgtcatcctagagcaaccgatgtcggagcatgcgagccccactggaatattgggggcgaggtacaaggcaagaacgctggagaatgaaacagagtggagtggtgtgaccagatgccaaaaaccagatttgggattggcgctggggcgcctgcctctgcccggattggcctttgctctaattgctgcatcttctctaagattagggcggttgtgtcgccatcaggtccttcctggggacaggtggattgccctcaatcctagccctagctgccgagcggttgttcgtcgaattttgacatcaacgtggccacctgcttttggggctcgacctctctgtgctcttgttcgcgctccctatttgccttgtggaggtccaccaatgcaagctcacacatggcggcgaggtcctggcctgatgggcgactgctacccggtcgtgcctccgctgcagtttgggtcagtgggacctgggatgagccctggggtcagtggtgatctgggggtgagccggagctcaggtggtagcctgcttggctatgtttccgtaggtcactccctgggcgaaacccaagaactaagatcattggaggggcggaggctgcaacgatggagatcgggtgacgatatggcggagagtggtgcggtgcaactgccccccagtctttcgcaccggaccccggccagcctatcaatcctccaattcagtgatcttcaatcttctactgaagctcctcaaattccagagaatcagaatgtatcgcgtaacattgattcattggattgccactggcagcgcaaggggacaacattttgcggtgtcagcgggaccggccgtgagcgatatcgcattaatattctttcattcattggcgtattgcgtaacattcattcattcattggcgtatctcgtatcgttcattcattcattcattggatcgccactggcagcgcaagggttcgcaagggacaacattttgctgtgttagcaggaccggccttgagcgatattgcattaacattctttcattataagcgcaagggtagccttgagccccgttggggttggcatcttttccttcatcacccagtcccagacggagaggaggcaaggcatgactctagcattataatagcgagcaacacgcttcttattgttgatattctagaggtgggctcgcgcggtgctcttccaagagatcagagtcgaggatcacggcctctgtgccaaaggacaggcagaaaggggactcacaattggcttttgtcggggtcgttcttatcgcccatagcacctcggggagtttttcggcccacaagcccttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

680

Amino Acids

74.61

Weight (kDa)

9.83

Isoelectric Point (pI)

53.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1749, 1847
AarI CACCTGC 1 cut(s) 1039
Acc16I TGCGCA 1 cut(s) 650
Acc36I ACCTGC 2 cut(s) 301, 1039
AccB1I GGYRCC 1 cut(s) 864
AccB7I CCANNNNNTGG 1 cut(s) 292
AccBSI CCGCTC 2 cut(s) 391, 995
AccI GTMKAC 2 cut(s) 106, 343
AccII CGCG 7 cut(s) 232, 348, 462, 1068, 1480, 1897, 1899
AclWI GGATC 4 cut(s) 537, 725, 1661, 1936
AcoI YGGCCR 3 cut(s) 1025, 1398, 1549
AcsI RAATTY 2 cut(s) 1008, 1455
AcuI CTGAAG 2 cut(s) 234, 1464
AcyI GRCGYC 1 cut(s) 865
AfaI GTAC 1 cut(s) 782
AfiI CCNNNNNNNGG 8 cut(s) 292, 848, 878, 952, 1037, 1088, 1396, 1778
AgsI TTSAA 3 cut(s) 362, 557, 1433
AjnI CCWGG 5 cut(s) 949, 1126, 1186, 1198, 1275
AluBI AGCT 9 cut(s) 96, 175, 248, 358, 490, 987, 1106, 1233, 1448
AluI AGCT 9 cut(s) 96, 175, 248, 358, 490, 987, 1106, 1233, 1448
Alw21I GWGCWC 4 cut(s) 417, 1060, 1235, 1906
Alw26I GTCTC 1 cut(s) 467
AlwI GGATC 4 cut(s) 537, 725, 1661, 1936
Ama87I CYCGRG 1 cut(s) 2013
ApeKI GCWGC 9 cut(s) 258, 671, 692, 902, 987, 1165, 1318, 1510, 1665
ApoI RAATTY 2 cut(s) 1008, 1455
AseI ATTAAT 1 cut(s) 1569
Asp700I GAANNNNTTC 1 cut(s) 450
AspLEI GCGC 9 cut(s) 462, 651, 859, 867, 1070, 1515, 1670, 1755, 1899
AspS9I GGNCC 8 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709, 2028
AsuC2I CCSGG 4 cut(s) 181, 879, 1151, 1397
AsuHPI GGTGA 4 cut(s) 1223, 1234, 1349, 1793
AvaI CYCGRG 1 cut(s) 2013
AvaII GGWCC 7 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709
BalI TGGCCA 1 cut(s) 1027
BanI GGYRCC 1 cut(s) 864
BanII GRGCYC 6 cut(s) 758, 1045, 1199, 1235, 1773, 1895
Bbv12I GWGCWC 4 cut(s) 417, 1060, 1235, 1906
BbvI GCAGC 9 cut(s) 245, 683, 704, 889, 974, 1152, 1305, 1522, 1677
BceAI ACGGC 2 cut(s) 1536, 1949
BcgI CGANNNNNNTGC 4 cut(s) 584, 618, 660, 694
BciT130I CCWGG 5 cut(s) 951, 1128, 1188, 1200, 1277
BclI TGATCA 1 cut(s) 631
BcnI CCSGG 4 cut(s) 181, 879, 1151, 1397
BcoDI GTCTC 1 cut(s) 467
BfaI CTAG 5 cut(s) 728, 978, 984, 1839, 1883
BfmI CTRYAG 1 cut(s) 1166
BfoI RGCGCY 2 cut(s) 860, 868
BfuAI ACCTGC 2 cut(s) 301, 1039
BglI GCCNNNNNGGC 2 cut(s) 1137, 1251
BlpI GCTNAGC 1 cut(s) 491
Bme1390I CCNGG 9 cut(s) 181, 879, 951, 1128, 1151, 1188, 1200, 1277, 1397
Bme18I GGWCC 7 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709
BmeT110I CYCGRG 1 cut(s) 2013
BmgT120I GGNCC 8 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709, 2028
BmiI GGNNCC 5 cut(s) 277, 866, 1185, 1394, 1546
BmrFI CCNGG 9 cut(s) 181, 879, 951, 1128, 1151, 1188, 1200, 1277, 1397
BmrI ACTGGG 3 cut(s) 50, 1371, 1799
BmsI GCATC 3 cut(s) 821, 914, 1795
BmuI ACTGGG 3 cut(s) 50, 1371, 1799
BplI GAGNNNNNCTC 4 cut(s) 260, 292, 1877, 1909
BpmI CTGGAG 1 cut(s) 818
Bpu10I CCTNAGC 2 cut(s) 395, 1234
Bpu1102I GCTNAGC 1 cut(s) 491
BpuEI CTTGAG 2 cut(s) 1738, 1787
BpuMI CCSGG 4 cut(s) 181, 879, 1151, 1397
BsaBI GATNNNNATC 3 cut(s) 534, 722, 1330
BsaHI GRCGYC 1 cut(s) 865
BsaWI WCCGGW 1 cut(s) 1389
BsaXI ACNNNNNCTCC 6 cut(s) 1222, 1252, 1321, 1351, 1432, 1462
Bsc4I CCNNNNNNNGG 8 cut(s) 292, 848, 878, 952, 1037, 1088, 1396, 1778
Bse118I RCCGGY 2 cut(s) 1547, 1711
Bse1I ACTGG 8 cut(s) 56, 501, 687, 766, 1377, 1511, 1666, 1805
Bse8I GATNNNNATC 3 cut(s) 534, 722, 1330
BseBI CCWGG 5 cut(s) 951, 1128, 1188, 1200, 1277
BseGI GGATG 5 cut(s) 145, 208, 589, 723, 1197
BseJI GATNNNNATC 3 cut(s) 534, 722, 1330
BseLI CCNNNNNNNGG 8 cut(s) 292, 848, 878, 952, 1037, 1088, 1396, 1778
BseMII CTCAG 3 cut(s) 26, 505, 1248
BseNI ACTGG 8 cut(s) 56, 501, 687, 766, 1377, 1511, 1666, 1805
BseRI GAGGAG 2 cut(s) 1440, 1835
BseX3I CGGCCG 1 cut(s) 1549
BseXI GCAGC 9 cut(s) 245, 683, 704, 889, 974, 1152, 1305, 1522, 1677
BseYI CCCAGC 2 cut(s) 620, 859
BsgI GTGCAG 1 cut(s) 711
Bsh1236I CGCG 7 cut(s) 232, 348, 462, 1068, 1480, 1897, 1899
Bsh1285I CGRYCG 4 cut(s) 37, 87, 1155, 1552
BshNI GGYRCC 1 cut(s) 864
BsiEI CGRYCG 4 cut(s) 37, 87, 1155, 1552
BsiHKAI GWGCWC 4 cut(s) 417, 1060, 1235, 1906
BsiHKCI CYCGRG 1 cut(s) 2013
BsiSI CCGG 8 cut(s) 180, 879, 1151, 1228, 1390, 1397, 1548, 1712
BslFI GGGAC 8 cut(s) 497, 968, 1197, 1534, 1558, 1698, 1793, 1978
BslI CCNNNNNNNGG 8 cut(s) 292, 848, 878, 952, 1037, 1088, 1396, 1778
BsmAI GTCTC 1 cut(s) 467
BsmFI GGGAC 8 cut(s) 497, 968, 1197, 1534, 1558, 1698, 1793, 1978
BsmI GAATGC 2 cut(s) 450, 452
BsoBI CYCGRG 1 cut(s) 2013
Bsp1286I GDGCHC 9 cut(s) 417, 758, 1045, 1060, 1199, 1235, 1773, 1895, 1906
Bsp1720I GCTNAGC 1 cut(s) 491
BspCNI CTCAG 3 cut(s) 25, 504, 1247
BspFNI CGCG 7 cut(s) 232, 348, 462, 1068, 1480, 1897, 1899
BspLI GGNNCC 5 cut(s) 277, 866, 1185, 1394, 1546
BspMAI CTGCAG 1 cut(s) 1170
BspMI ACCTGC 2 cut(s) 301, 1039
BspPI GGATC 4 cut(s) 537, 725, 1661, 1936
BspQI GCTCTTC 1 cut(s) 1911
BspT107I GGYRCC 1 cut(s) 864
BsrBI CCGCTC 2 cut(s) 391, 995
BsrFI RCCGGY 2 cut(s) 1547, 1711
BsrI ACTGG 8 cut(s) 56, 501, 687, 766, 1377, 1511, 1666, 1805
BssAI RCCGGY 2 cut(s) 1547, 1711
BssNI GRCGYC 1 cut(s) 865
BssT1I CCWWGG 1 cut(s) 262
Bst2UI CCWGG 5 cut(s) 951, 1128, 1188, 1200, 1277
Bst4CI ACNGT 1 cut(s) 341
Bst6I CTCTTC 1 cut(s) 1911
BstACI GRCGYC 1 cut(s) 865
BstDEI CTNAG 9 cut(s) 12, 97, 209, 395, 491, 914, 1234, 1295, 2040
BstENI CCTNNNNNAGG 1 cut(s) 1086
BstF5I GGATG 5 cut(s) 145, 208, 589, 723, 1197
BstFNI CGCG 7 cut(s) 232, 348, 462, 1068, 1480, 1897, 1899
BstH2I RGCGCY 2 cut(s) 860, 868
BstHHI GCGC 9 cut(s) 462, 651, 859, 867, 1070, 1515, 1670, 1755, 1899
BstMAI GTCTC 1 cut(s) 467
BstMCI CGRYCG 4 cut(s) 37, 87, 1155, 1552
BstNI CCWGG 5 cut(s) 951, 1128, 1188, 1200, 1277
BstNSI RCATGY 3 cut(s) 658, 662, 752
BstSCI CCNGG 9 cut(s) 179, 877, 949, 1126, 1149, 1186, 1198, 1275, 1395
BstSFI CTRYAG 1 cut(s) 1166
BstUI CGCG 7 cut(s) 232, 348, 462, 1068, 1480, 1897, 1899
BstV1I GCAGC 9 cut(s) 245, 683, 704, 889, 974, 1152, 1305, 1522, 1677
BstX2I RGATCY 1 cut(s) 529
BstYI RGATCY 1 cut(s) 529
BstZI CGGCCG 1 cut(s) 1549
BtgZI GCGATG 2 cut(s) 247, 363
BtsCI GGATG 5 cut(s) 145, 208, 589, 723, 1197
BtsI GCAGTG 1 cut(s) 615
BtsIMutI CAGTG 8 cut(s) 615, 694, 759, 1185, 1213, 1429, 1504, 1659
BveI ACCTGC 2 cut(s) 301, 1039
CfoI GCGC 9 cut(s) 462, 651, 859, 867, 1070, 1515, 1670, 1755, 1899
Cfr10I RCCGGY 2 cut(s) 1547, 1711
Cfr13I GGNCC 8 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709, 2028
Csp6I GTAC 1 cut(s) 781
CviAII CATG 6 cut(s) 290, 655, 659, 749, 1113, 1832
CviQI GTAC 1 cut(s) 781
DdeI CTNAG 9 cut(s) 12, 97, 209, 395, 491, 914, 1234, 1295, 2040
DinI GGCGCC 1 cut(s) 866
EaeI YGGCCR 3 cut(s) 1025, 1398, 1549
EagI CGGCCG 1 cut(s) 1549
Eam1104I CTCTTC 1 cut(s) 1911
EarI CTCTTC 1 cut(s) 1911
EciI GGCGGA 2 cut(s) 1327, 1364
Ecl136II GAGCTC 1 cut(s) 1233
EclXI CGGCCG 1 cut(s) 1549
Eco130I CCWWGG 1 cut(s) 262
Eco24I GRGCYC 6 cut(s) 758, 1045, 1199, 1235, 1773, 1895
Eco32I GATATC 2 cut(s) 145, 1562
Eco47I GGWCC 7 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709
Eco52I CGGCCG 1 cut(s) 1549
Eco53kI GAGCTC 1 cut(s) 1233
Eco57I CTGAAG 2 cut(s) 234, 1464
Eco88I CYCGRG 1 cut(s) 2013
EcoICRI GAGCTC 1 cut(s) 1233
EcoNI CCTNNNNNAGG 1 cut(s) 1086
EcoO109I RGGNCCY 3 cut(s) 943, 1124, 1184
EcoRII CCWGG 5 cut(s) 949, 1126, 1186, 1198, 1275
EcoRV GATATC 2 cut(s) 145, 1562
EcoT14I CCWWGG 1 cut(s) 262
EcoT22I ATGCAT 2 cut(s) 452, 660
EcoT38I GRGCYC 6 cut(s) 758, 1045, 1199, 1235, 1773, 1895
EgeI GGCGCC 1 cut(s) 866
EheI GGCGCC 1 cut(s) 866
ErhI CCWWGG 1 cut(s) 262
FaeI CATG 6 cut(s) 293, 658, 662, 752, 1116, 1835
FaqI GGGAC 8 cut(s) 497, 968, 1197, 1534, 1558, 1698, 1793, 1978
FatI CATG 6 cut(s) 289, 654, 658, 748, 1112, 1831
FauI CCCGC 1 cut(s) 1535
FbaI TGATCA 1 cut(s) 631
FblI GTMKAC 2 cut(s) 106, 343
FokI GGATG 5 cut(s) 152, 215, 596, 710, 1204
FriOI GRGCYC 6 cut(s) 758, 1045, 1199, 1235, 1773, 1895
FspBI CTAG 5 cut(s) 728, 978, 984, 1839, 1883
FspI TGCGCA 1 cut(s) 650
GlaI GCGC 9 cut(s) 461, 650, 858, 866, 1069, 1514, 1669, 1754, 1898
GsaI CCCAGC 2 cut(s) 624, 863
GsuI CTGGAG 1 cut(s) 818
HaeII RGCGCY 2 cut(s) 860, 868
HapII CCGG 8 cut(s) 180, 879, 1151, 1228, 1390, 1397, 1548, 1712
HhaI GCGC 9 cut(s) 462, 651, 859, 867, 1070, 1515, 1670, 1755, 1899
Hin1I GRCGYC 1 cut(s) 865
Hin1II CATG 6 cut(s) 293, 658, 662, 752, 1116, 1835
Hin6I GCGC 9 cut(s) 460, 649, 857, 865, 1068, 1513, 1668, 1753, 1897
HinP1I GCGC 9 cut(s) 460, 649, 857, 865, 1068, 1513, 1668, 1753, 1897
HincII GTYRAC 2 cut(s) 107, 337
HindII GTYRAC 2 cut(s) 107, 337
HindIII AAGCTT 1 cut(s) 356
HpaII CCGG 8 cut(s) 180, 879, 1151, 1228, 1390, 1397, 1548, 1712
HphI GGTGA 4 cut(s) 1223, 1234, 1349, 1793
Hpy166II GTNNAC 4 cut(s) 107, 337, 344, 1094
Hpy188I TCNGA 8 cut(s) 15, 225, 442, 472, 583, 745, 1470, 1920
Hpy188III TCNNGA 7 cut(s) 482, 506, 557, 605, 635, 1460, 1883
Hpy8I GTNNAC 4 cut(s) 107, 337, 344, 1094
Hpy99I CGWCG 2 cut(s) 111, 1008
HpyAV CCTTC 4 cut(s) 394, 586, 956, 1805
HpyCH4III ACNGT 1 cut(s) 341
HpyCH4IV ACGT 1 cut(s) 1022
HpyF3I CTNAG 9 cut(s) 12, 97, 209, 395, 491, 914, 1234, 1295, 2040
HpySE526I ACGT 1 cut(s) 1022
Hsp92I GRCGYC 1 cut(s) 865
Hsp92II CATG 6 cut(s) 293, 658, 662, 752, 1116, 1835
HspAI GCGC 9 cut(s) 460, 649, 857, 865, 1068, 1513, 1668, 1753, 1897
KasI GGCGCC 1 cut(s) 864
Ksp22I TGATCA 1 cut(s) 631
LguI GCTCTTC 1 cut(s) 1911
LmnI GCTCC 9 cut(s) 154, 172, 245, 281, 388, 745, 1075, 1230, 1453
Lsp1109I GCAGC 9 cut(s) 245, 683, 704, 889, 974, 1152, 1305, 1522, 1677
LweI GCATC 3 cut(s) 821, 914, 1795
MaeI CTAG 5 cut(s) 728, 978, 984, 1839, 1883
MaeII ACGT 1 cut(s) 1022
MaeIII GTNAC 7 cut(s) 40, 431, 823, 1268, 1337, 1481, 1598
MbiI CCGCTC 2 cut(s) 391, 995
MboII GAAGA 8 cut(s) 455, 530, 574, 652, 900, 1421, 1428, 1898
MfeI CAATTG 1 cut(s) 1972
MflI RGATCY 1 cut(s) 529
MhlI GDGCHC 9 cut(s) 417, 758, 1045, 1060, 1199, 1235, 1773, 1895, 1906
MlsI TGGCCA 1 cut(s) 1027
MluCI AATT 5 cut(s) 897, 1008, 1418, 1455, 1972
MluNI TGGCCA 1 cut(s) 1027
Mly113I GGCGCC 1 cut(s) 865
MlyI GAGTC 6 cut(s) 10, 60, 170, 1829, 1930, 1960
MmeI TCCRAC 2 cut(s) 223, 723
Mox20I TGGCCA 1 cut(s) 1027
Mph1103I ATGCAT 2 cut(s) 452, 660
MroXI GAANNNNTTC 1 cut(s) 450
MscI TGGCCA 1 cut(s) 1027
MseI TTAA 3 cut(s) 354, 1569, 1733
MslI CAYNNNNRTG 1 cut(s) 1021
Msp20I TGGCCA 1 cut(s) 1027
MspA1I CMGCKG 2 cut(s) 1165, 1542
MspI CCGG 8 cut(s) 180, 879, 1151, 1228, 1390, 1397, 1548, 1712
MspR9I CCNGG 9 cut(s) 181, 879, 951, 1128, 1151, 1188, 1200, 1277, 1397
MunI CAATTG 1 cut(s) 1972
Mva1269I GAATGC 2 cut(s) 450, 452
MvaI CCWGG 5 cut(s) 951, 1128, 1188, 1200, 1277
MvnI CGCG 7 cut(s) 232, 348, 462, 1068, 1480, 1897, 1899
NarI GGCGCC 1 cut(s) 865
NciI CCSGG 4 cut(s) 181, 879, 1151, 1397
NlaIII CATG 6 cut(s) 293, 658, 662, 752, 1116, 1835
NlaIV GGNNCC 5 cut(s) 277, 866, 1185, 1394, 1546
NmeAIII GCCGAG 2 cut(s) 160, 1016
NmuCI GTSAC 4 cut(s) 40, 823, 1268, 1337
NsbI TGCGCA 1 cut(s) 650
NsiI ATGCAT 2 cut(s) 452, 660
NspI RCATGY 3 cut(s) 658, 662, 752
PaeI GCATGC 2 cut(s) 662, 752
PaqCI CACCTGC 1 cut(s) 1039
PasI CCCWGGG 2 cut(s) 1199, 1276
PciSI GCTCTTC 1 cut(s) 1911
PcsI WCGNNNNNNNCGW 1 cut(s) 749
PctI GAATGC 2 cut(s) 450, 452
PdmI GAANNNNTTC 1 cut(s) 450
PfeI GAWTC 4 cut(s) 421, 601, 1465, 1490
PflMI CCANNNNNTGG 1 cut(s) 292
PleI GAGTC 6 cut(s) 10, 60, 169, 1829, 1929, 1960
PluTI GGCGCC 1 cut(s) 868
PpsI GAGTC 6 cut(s) 10, 60, 169, 1829, 1929, 1960
PpuMI RGGWCCY 3 cut(s) 943, 1124, 1184
PshBI ATTAAT 1 cut(s) 1569
PsiI TTATAA 2 cut(s) 1749, 1847
Psp124BI GAGCTC 1 cut(s) 1235
Psp5II RGGWCCY 3 cut(s) 943, 1124, 1184
Psp6I CCWGG 5 cut(s) 949, 1126, 1186, 1198, 1275
PspFI CCCAGC 2 cut(s) 620, 859
PspGI CCWGG 5 cut(s) 949, 1126, 1186, 1198, 1275
PspN4I GGNNCC 5 cut(s) 277, 866, 1185, 1394, 1546
PspPI GGNCC 8 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709, 2028
PspPPI RGGWCCY 3 cut(s) 943, 1124, 1184
PstI CTGCAG 1 cut(s) 1170
PsuI RGATCY 1 cut(s) 529
RsaI GTAC 1 cut(s) 782
RsaNI GTAC 1 cut(s) 781
RseI CAYNNNNRTG 1 cut(s) 1021
SacI GAGCTC 1 cut(s) 1235
SalI GTCGAC 1 cut(s) 105
SapI GCTCTTC 1 cut(s) 1911
SaqAI TTAA 3 cut(s) 354, 1569, 1733
Sau96I GGNCC 8 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709, 2028
SchI GAGTC 6 cut(s) 10, 60, 170, 1829, 1930, 1960
ScrFI CCNGG 9 cut(s) 181, 879, 951, 1128, 1151, 1188, 1200, 1277, 1397
SduI GDGCHC 9 cut(s) 417, 758, 1045, 1060, 1199, 1235, 1773, 1895, 1906
SfaNI GCATC 3 cut(s) 821, 914, 1795
SfcI CTRYAG 1 cut(s) 1166
SfoI GGCGCC 1 cut(s) 866
SinI GGWCC 7 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709
SmiMI CAYNNNNRTG 1 cut(s) 1021
SmlI CTYRAG 2 cut(s) 1717, 1766
SmoI CTYRAG 2 cut(s) 1717, 1766
SphI GCATGC 2 cut(s) 662, 752
Sse9I AATT 5 cut(s) 897, 1008, 1418, 1455, 1972
SspDI GGCGCC 1 cut(s) 864
SspI AATATT 2 cut(s) 768, 1573
SspMI CTAG 5 cut(s) 728, 978, 984, 1839, 1883
SstI GAGCTC 1 cut(s) 1235
StyD4I CCNGG 9 cut(s) 179, 877, 949, 1126, 1149, 1186, 1198, 1275, 1395
StyI CCWWGG 1 cut(s) 262
TaaI ACNGT 1 cut(s) 341
TaiI ACGT 1 cut(s) 1025
TaqII GACCGA 4 cut(s) 23, 59, 73, 531
TasI AATT 5 cut(s) 897, 1008, 1418, 1455, 1972
TauI GCSGC 3 cut(s) 258, 394, 1120
TfiI GAWTC 4 cut(s) 421, 601, 1465, 1490
Tru1I TTAA 3 cut(s) 354, 1569, 1733
Tru9I TTAA 3 cut(s) 354, 1569, 1733
TscAI CASTG 8 cut(s) 622, 694, 766, 1185, 1213, 1429, 1511, 1666
TseFI GTSAC 4 cut(s) 40, 823, 1268, 1337
TseI GCWGC 9 cut(s) 258, 671, 692, 902, 987, 1165, 1318, 1510, 1665
Tsp45I GTSAC 4 cut(s) 40, 823, 1268, 1337
TspGWI ACGGA 2 cut(s) 1252, 1830
TspRI CASTG 8 cut(s) 622, 694, 766, 1185, 1213, 1429, 1511, 1666
Van91I CCANNNNNTGG 1 cut(s) 292
VpaK11BI GGWCC 7 cut(s) 943, 1091, 1124, 1184, 1392, 1545, 1709
VspI ATTAAT 1 cut(s) 1569
XagI CCTNNNNNAGG 1 cut(s) 1086
XapI RAATTY 2 cut(s) 1008, 1455
XbaI TCTAGA 1 cut(s) 1882
XceI RCATGY 3 cut(s) 658, 662, 752
XcmI CCANNNNNNNNNTGG 1 cut(s) 766
XmiI GTMKAC 2 cut(s) 106, 343
XmnI GAANNNNTTC 1 cut(s) 450
XspI CTAG 5 cut(s) 728, 978, 984, 1839, 1883
Zsp2I ATGCAT 2 cut(s) 452, 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.