Rmu_sc0004869.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004869.1
OG0000075
Physical Location & Seq
Reverse (-)
2656 .. 4954
2299 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004869.1_g000003.1.cds

Sequence Viewer

Length: 1005 bp
atgggatcgcgagaagaatggagttggagccaacgctcgccgccaagaggtcgaggacgctatcgctccattgagggagtcaaacctaaatcttaccgggaagctgcaacgggcggggatggtttgagattggtagatcaggtcagggcttggagcctggctccttatcccgatcgcgtggtggatttggagggacaggttggcaatctgcaaagggaggttgactatctaagggatgttgagcttgaagtaggcgagagggccgagatggagcagctcaagaagaagttagccgagcaacagactcggtcgagtagctttgccgaggaatgcattcgcctgcgcgctgttgttgagacacatcgggataagctccgcaaggccagtcgtgatggtgcggacaaggcggtggatctttatcttcggtcaagccattttcaagagaagatgaacaaagccttctcggatgggttctgggatcgtgatccgggagccagcaatgtcagagcgtgcatcgggacaacgggcgaacttgaggccgagggcgcttctggcaagcaggaggcccacgtggatatatgggcgaggtataaggcgagaacgttggagagagagacggaatggagcggcgtgatcaggtcattaaggcgacgcgacgattggttgtccggagtcgtgctggaggcgagagcgagtggcgaggtgttaacatcgggtaattccgttaggcgtggtatcgcgttatcattttccgctgctaccttacatcgcgtatcgttgcggtatttaaggggtttgggaatcactatgtgtcgtgtggtatttatccatggagactcgtgtagcagtcattcattgacggcggagaatggcatatcgttaacgttcattcattcattcgacgacatatcgtgtagcgttacccattcattcatttggtcgcaattggcagcgcgaaggtttgcaagggacagcattgtgcttccccagcggaacctgtcgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

334

Amino Acids

37.62

Weight (kDa)

9.11

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 627
AccII CGCG 7 cut(s) 10, 177, 345, 654, 740, 771, 955
AccIII TCCGGA 1 cut(s) 668
AclI AACGTT 2 cut(s) 602, 884
AclWI GGATC 4 cut(s) 13, 420, 479, 486
AcvI CACGTG 1 cut(s) 571
AdeI CACNNNGTG 1 cut(s) 810
AfiI CCNNNNNNNGG 1 cut(s) 47
AgsI TTSAA 2 cut(s) 248, 440
AjnI CCWGG 1 cut(s) 156
AluBI AGCT 5 cut(s) 104, 244, 277, 318, 373
AluI AGCT 5 cut(s) 104, 244, 277, 318, 373
Alw26I GTCTC 3 cut(s) 350, 608, 828
AlwI GGATC 4 cut(s) 13, 420, 479, 486
Aor13HI TCCGGA 1 cut(s) 668
AoxI GGCC 4 cut(s) 261, 381, 537, 564
ApeKI GCWGC 4 cut(s) 104, 274, 755, 950
Asp700I GAANNNNTTC 1 cut(s) 333
AspLEI GCGC 4 cut(s) 345, 347, 548, 955
AspS9I GGNCC 2 cut(s) 261, 565
AsuC2I CCSGG 2 cut(s) 98, 489
BauI CACGAG 1 cut(s) 838
BbrPI CACGTG 1 cut(s) 571
BbvI GCAGC 4 cut(s) 91, 286, 742, 962
BccI CCATC 4 cut(s) 113, 262, 386, 461
BceAI ACGGC 1 cut(s) 876
BcgI CGANNNNNNTGC 2 cut(s) 287, 321
BciT130I CCWGG 1 cut(s) 158
BclI TGATCA 1 cut(s) 633
BcnI CCSGG 2 cut(s) 98, 489
BcoDI GTCTC 3 cut(s) 350, 608, 828
BfoI RGCGCY 1 cut(s) 549
BisI GCNGC 6 cut(s) 41, 105, 275, 628, 756, 951
BlsI GCNGC 6 cut(s) 42, 106, 276, 629, 757, 952
Bme1390I CCNGG 3 cut(s) 98, 158, 489
BmgT120I GGNCC 2 cut(s) 261, 565
BmiI GGNNCC 5 cut(s) 29, 155, 162, 493, 995
BmrFI CCNGG 3 cut(s) 98, 158, 489
BmsI GCATC 1 cut(s) 522
BplI GAGNNNNNCTC 2 cut(s) 145, 177
BpmI CTGGAG 1 cut(s) 701
BpuEI CTTGAG 2 cut(s) 263, 554
BpuMI CCSGG 2 cut(s) 98, 489
BsaAI YACGTR 1 cut(s) 571
BsaBI GATNNNNATC 2 cut(s) 417, 483
BsaJI CCNNGG 3 cut(s) 324, 540, 829
BsaWI WCCGGW 1 cut(s) 668
Bsc4I CCNNNNNNNGG 1 cut(s) 47
Bse1I ACTGG 1 cut(s) 384
Bse3DI GCAATG 1 cut(s) 505
Bse8I GATNNNNATC 2 cut(s) 417, 483
BseAI TCCGGA 1 cut(s) 668
BseBI CCWGG 1 cut(s) 158
BseDI CCNNGG 3 cut(s) 324, 540, 829
BseGI GGATG 3 cut(s) 124, 241, 472
BseJI GATNNNNATC 2 cut(s) 417, 483
BseLI CCNNNNNNNGG 1 cut(s) 47
BseMI GCAATG 1 cut(s) 505
BseNI ACTGG 1 cut(s) 384
BsePI GCGCGC 1 cut(s) 343
BseXI GCAGC 4 cut(s) 91, 286, 742, 962
BseYI CCCAGC 1 cut(s) 987
Bsh1236I CGCG 7 cut(s) 10, 177, 345, 654, 740, 771, 955
Bsh1285I CGRYCG 2 cut(s) 175, 311
BshFI GGCC 4 cut(s) 263, 383, 539, 566
BsiEI CGRYCG 2 cut(s) 175, 311
BsiSI CCGG 3 cut(s) 97, 488, 669
BslFI GGGAC 3 cut(s) 207, 532, 983
BslI CCNNNNNNNGG 1 cut(s) 47
BsmAI GTCTC 3 cut(s) 350, 608, 828
BsmBI CGTCTC 1 cut(s) 608
BsmFI GGGAC 3 cut(s) 207, 532, 983
BsmI GAATGC 2 cut(s) 333, 335
BsnI GGCC 4 cut(s) 263, 383, 539, 566
Bsp13I TCCGGA 1 cut(s) 668
Bsp143I GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
Bsp19I CCATGG 1 cut(s) 829
Bsp68I TCGCGA 1 cut(s) 10
BspANI GGCC 4 cut(s) 263, 383, 539, 566
BspEI TCCGGA 1 cut(s) 668
BspFNI CGCG 7 cut(s) 10, 177, 345, 654, 740, 771, 955
BspLI GGNNCC 5 cut(s) 29, 155, 162, 493, 995
BspPI GGATC 4 cut(s) 13, 420, 479, 486
BsrBI CCGCTC 1 cut(s) 627
BsrDI GCAATG 1 cut(s) 505
BsrI ACTGG 1 cut(s) 384
BssECI CCNNGG 3 cut(s) 324, 540, 829
BssHII GCGCGC 1 cut(s) 343
BssMI GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
BssSI CACGAG 1 cut(s) 838
BssT1I CCWWGG 1 cut(s) 829
Bst2BI CACGAG 1 cut(s) 838
Bst2UI CCWGG 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 571
BstC8I GCNNGC 6 cut(s) 38, 341, 345, 496, 511, 557
BstDEI CTNAG 1 cut(s) 230
BstDSI CCRYGG 1 cut(s) 829
BstF5I GGATG 3 cut(s) 124, 241, 472
BstFNI CGCG 7 cut(s) 10, 177, 345, 654, 740, 771, 955
BstH2I RGCGCY 1 cut(s) 549
BstHHI GCGC 4 cut(s) 345, 347, 548, 955
BstKTI GATC 7 cut(s) 8, 139, 175, 415, 481, 487, 636
BstMAI GTCTC 3 cut(s) 350, 608, 828
BstMBI GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
BstMCI CGRYCG 2 cut(s) 175, 311
BstMWI GCNNNNNNNGC 4 cut(s) 404, 545, 552, 988
BstNI CCWGG 1 cut(s) 158
BstSCI CCNGG 3 cut(s) 96, 156, 487
BstUI CGCG 7 cut(s) 10, 177, 345, 654, 740, 771, 955
BstV1I GCAGC 4 cut(s) 91, 286, 742, 962
BstX2I RGATCY 1 cut(s) 412
BstYI RGATCY 1 cut(s) 412
BsuRI GGCC 4 cut(s) 263, 383, 539, 566
BtgI CCRYGG 1 cut(s) 829
BtgZI GCGATG 1 cut(s) 752
BtsCI GGATG 3 cut(s) 124, 241, 472
BtuMI TCGCGA 1 cut(s) 10
Cac8I GCNNGC 6 cut(s) 38, 341, 345, 496, 511, 557
CfoI GCGC 4 cut(s) 345, 347, 548, 955
Cfr13I GGNCC 2 cut(s) 261, 565
CseI GACGC 2 cut(s) 66, 660
CviAII CATG 1 cut(s) 830
DdeI CTNAG 1 cut(s) 230
DpnI GATC 7 cut(s) 7, 138, 174, 414, 480, 486, 635
DpnII GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
DraIII CACNNNGTG 1 cut(s) 810
EciI GGCGGA 1 cut(s) 878
Eco130I CCWWGG 1 cut(s) 829
Eco72I CACGTG 1 cut(s) 571
EcoRII CCWGG 1 cut(s) 156
EcoT14I CCWWGG 1 cut(s) 829
EcoT22I ATGCAT 1 cut(s) 335
ErhI CCWWGG 1 cut(s) 829
Esp3I CGTCTC 1 cut(s) 608
FaeI CATG 1 cut(s) 833
FaiI YATR 7 cut(s) 578, 580, 591, 809, 831, 875, 908
FaqI GGGAC 3 cut(s) 207, 532, 983
FatI CATG 1 cut(s) 829
FauI CCCGC 1 cut(s) 107
FbaI TGATCA 1 cut(s) 633
Fnu4HI GCNGC 6 cut(s) 41, 105, 275, 628, 756, 951
FokI GGATG 3 cut(s) 131, 248, 479
Fsp4HI GCNGC 6 cut(s) 41, 105, 275, 628, 756, 951
GlaI GCGC 4 cut(s) 344, 346, 547, 954
GluI GCNGC 6 cut(s) 41, 105, 275, 628, 756, 951
GsaI CCCAGC 1 cut(s) 991
GsuI CTGGAG 1 cut(s) 701
HaeII RGCGCY 1 cut(s) 549
HaeIII GGCC 4 cut(s) 263, 383, 539, 566
HapII CCGG 3 cut(s) 97, 488, 669
HgaI GACGC 2 cut(s) 66, 660
HhaI GCGC 4 cut(s) 345, 347, 548, 955
Hin1II CATG 1 cut(s) 833
Hin6I GCGC 4 cut(s) 343, 345, 546, 953
HinP1I GCGC 4 cut(s) 343, 345, 546, 953
HincII GTYRAC 3 cut(s) 223, 708, 882
HindII GTYRAC 3 cut(s) 223, 708, 882
HinfI GANTC 5 cut(s) 78, 304, 672, 801, 836
HpaI GTTAAC 2 cut(s) 708, 882
HpaII CCGG 3 cut(s) 97, 488, 669
Hpy166II GTNNAC 3 cut(s) 223, 708, 882
Hpy188I TCNGA 2 cut(s) 466, 506
Hpy8I GTNNAC 3 cut(s) 223, 708, 882
Hpy99I CGWCG 3 cut(s) 654, 659, 905
HpyAV CCTTC 2 cut(s) 469, 951
HpyCH4IV ACGT 3 cut(s) 570, 602, 884
HpyCH4V TGCA 5 cut(s) 107, 211, 333, 513, 965
HpyF10VI GCNNNNNNNGC 4 cut(s) 404, 545, 552, 988
HpyF3I CTNAG 1 cut(s) 230
HpySE526I ACGT 3 cut(s) 570, 602, 884
Hsp92II CATG 1 cut(s) 833
HspAI GCGC 4 cut(s) 343, 345, 546, 953
Kpn2I TCCGGA 1 cut(s) 668
Ksp22I TGATCA 1 cut(s) 633
KspAI GTTAAC 2 cut(s) 708, 882
Kzo9I GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
LmnI GCTCC 8 cut(s) 27, 71, 153, 166, 271, 378, 491, 624
Lsp1109I GCAGC 4 cut(s) 91, 286, 742, 962
LweI GCATC 1 cut(s) 522
MaeII ACGT 3 cut(s) 570, 602, 884
MaeIII GTNAC 1 cut(s) 919
MalI GATC 7 cut(s) 7, 138, 174, 414, 480, 486, 635
MbiI CCGCTC 1 cut(s) 627
MboI GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
MboII GAAGA 4 cut(s) 26, 295, 413, 457
MfeI CAATTG 1 cut(s) 944
MflI RGATCY 1 cut(s) 412
MluCI AATT 2 cut(s) 718, 944
MlyI GAGTC 4 cut(s) 87, 298, 681, 830
MmeI TCCRAC 2 cut(s) 5, 585
Mph1103I ATGCAT 1 cut(s) 335
MroI TCCGGA 1 cut(s) 668
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 4 cut(s) 644, 707, 788, 881
MspA1I CMGCKG 2 cut(s) 755, 991
MspI CCGG 3 cut(s) 97, 488, 669
MspR9I CCNGG 3 cut(s) 98, 158, 489
MunI CAATTG 1 cut(s) 944
Mva1269I GAATGC 2 cut(s) 333, 335
MvaI CCWGG 1 cut(s) 158
MvnI CGCG 7 cut(s) 10, 177, 345, 654, 740, 771, 955
MwoI GCNNNNNNNGC 4 cut(s) 404, 545, 552, 988
NciI CCSGG 2 cut(s) 98, 489
NcoI CCATGG 1 cut(s) 829
NdeII GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
NlaIII CATG 1 cut(s) 833
NlaIV GGNNCC 5 cut(s) 29, 155, 162, 493, 995
NmeAIII GCCGAG 4 cut(s) 289, 319, 349, 565
NruI TCGCGA 1 cut(s) 10
NsiI ATGCAT 1 cut(s) 335
PauI GCGCGC 1 cut(s) 343
PctI GAATGC 2 cut(s) 333, 335
PdmI GAANNNNTTC 1 cut(s) 333
PfeI GAWTC 1 cut(s) 801
PflFI GACNNNGTC 1 cut(s) 307
PfoI TCCNGGA 1 cut(s) 487
PkrI GCNGC 6 cut(s) 42, 106, 276, 629, 757, 952
Ple19I CGATCG 1 cut(s) 175
PleI GAGTC 4 cut(s) 86, 298, 680, 830
PmaCI CACGTG 1 cut(s) 571
PmlI CACGTG 1 cut(s) 571
PpsI GAGTC 4 cut(s) 86, 298, 680, 830
Ppu21I YACGTR 1 cut(s) 571
Psp1406I AACGTT 2 cut(s) 602, 884
Psp6I CCWGG 1 cut(s) 156
PspCI CACGTG 1 cut(s) 571
PspFI CCCAGC 1 cut(s) 987
PspGI CCWGG 1 cut(s) 156
PspN4I GGNNCC 5 cut(s) 29, 155, 162, 493, 995
PspPI GGNCC 2 cut(s) 261, 565
PsuI RGATCY 1 cut(s) 412
PsyI GACNNNGTC 1 cut(s) 307
PteI GCGCGC 1 cut(s) 343
PvuI CGATCG 1 cut(s) 175
RruI TCGCGA 1 cut(s) 10
SaqAI TTAA 4 cut(s) 644, 707, 788, 881
SatI GCNGC 6 cut(s) 41, 105, 275, 628, 756, 951
Sau3AI GATC 7 cut(s) 5, 136, 172, 412, 478, 484, 633
Sau96I GGNCC 2 cut(s) 261, 565
SchI GAGTC 4 cut(s) 87, 298, 681, 830
ScrFI CCNGG 3 cut(s) 98, 158, 489
SfaNI GCATC 1 cut(s) 522
SmlI CTYRAG 2 cut(s) 278, 533
SmoI CTYRAG 2 cut(s) 278, 533
Sse9I AATT 2 cut(s) 718, 944
StyD4I CCNGG 3 cut(s) 96, 156, 487
StyI CCWWGG 1 cut(s) 829
TaiI ACGT 3 cut(s) 573, 605, 887
TaqI TCGA 3 cut(s) 52, 311, 900
TaqII GACCGA 2 cut(s) 297, 414
TasI AATT 2 cut(s) 718, 944
TauI GCSGC 2 cut(s) 43, 630
TfiI GAWTC 1 cut(s) 801
Tru1I TTAA 4 cut(s) 644, 707, 788, 881
Tru9I TTAA 4 cut(s) 644, 707, 788, 881
TseI GCWGC 4 cut(s) 104, 274, 755, 950
TspDTI ATGAA 7 cut(s) 464, 843, 877, 881, 885, 918, 922
TspGWI ACGGA 2 cut(s) 632, 712
Tth111I GACNNNGTC 1 cut(s) 307
XmnI GAANNNNTTC 1 cut(s) 333
Zsp2I ATGCAT 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.