Rmu_sc0016149.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016149.1
OG0000075
Physical Location & Seq
Forward (+)
13513 .. 15305
1793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016149.1_g000003.1.cds

Sequence Viewer

Length: 1083 bp
atgctgctgcctgacaaggtgtatctgagttgtcacgataccatgctggagtatctcaaccaacgagctgaggaagaagccgatgtcgaggggcatgaggcgcaggatgttaggggacatgctcaaaatccccaggggccgccagtgcaggtgggtgaagtgggcgagcgtcttcaaatgcatgttgataccagtgctcgtgctcgcttggtgcaagatgcggctttgaaactgctggaaaccatttttggtgatgagattggcgatctcgtctcgcaggaggtcattaccgtggacagtggggaggcagaggtgaccagccaagccgttggtgagacaggtctgatagttgaggctcctgaggtgcaacccgggtccgaagaagatctgcggaactgtcatcgcgaccgcagtcgcgtgaatacaaaagatccgtgcctggggtatcgggaggctcaggagaggttgatgagggctgtgaacatgaattaccatgcctctggcgagttggtagctcactttgatatggagatagcccagttgcagggggagctgaatgtcgagagggagagggtccatgagcttcagaatgcgttagaccagggccaggtggaatgcgaggatatgaggcgagcaattaatgatgagatcatgagaaggatggagttggagcgatcactcgcagtggaggaggctcgcagccaagaggccgaggagttggagcttcgtgctgctgccttggagagtttggctccttatcccaacagtgtggtggatttggaggggcaagttggtaatttgcaaagggaggttgaccgtttacgggatgttgagcttgaagcaggcgagagggaggcagagatgcagcaactcaggaaggagttagccgagcaacaggctcggtcgagtagctttgccaaggagtgcattcgcttgcgcgctgctgccgagacacatcaggacaagctcgccaatgctaggcgggatgatgctgataaggcggtggatctctatctccggtcagcccactttcaagagaagatgaacaaagccttctcggatggggccttgcactcgatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

360

Amino Acids

40.53

Weight (kDa)

4.68

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 139
Acc36I ACCTGC 1 cut(s) 139
AccII CGCG 3 cut(s) 405, 417, 939
AciI CCGC 6 cut(s) 140, 221, 391, 409, 982, 1001
AclWI GGATC 2 cut(s) 425, 1014
AcuI CTGAAG 1 cut(s) 569
AfiI CCNNNNNNNGG 5 cut(s) 440, 544, 607, 823, 978
AgsI TTSAA 4 cut(s) 176, 229, 839, 1034
AjnI CCWGG 4 cut(s) 132, 438, 600, 606
AjuI GAANNNNNNNTTGG 2 cut(s) 231, 263
AluBI AGCT 8 cut(s) 68, 515, 553, 583, 724, 835, 912, 967
AluI AGCT 8 cut(s) 68, 515, 553, 583, 724, 835, 912, 967
Alw21I GWGCWC 2 cut(s) 199, 205
Alw26I GTCTC 3 cut(s) 277, 329, 944
AlwI GGATC 2 cut(s) 425, 1014
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 4 cut(s) 137, 604, 708, 1065
ApeKI GCWGC 8 cut(s) 4, 7, 699, 731, 734, 865, 941, 944
AseI ATTAAT 1 cut(s) 639
AspLEI GCGC 3 cut(s) 103, 939, 941
AspS9I GGNCC 5 cut(s) 137, 375, 574, 604, 1065
AsuC2I CCSGG 2 cut(s) 372, 373
AsuHPI GGTGA 4 cut(s) 167, 263, 325, 344
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 2 cut(s) 375, 574
AxyI CCTNAGG 1 cut(s) 360
BauI CACGAG 1 cut(s) 198
BbsI GAAGAC 1 cut(s) 164
Bbv12I GWGCWC 2 cut(s) 199, 205
BbvCI CCTCAGC 1 cut(s) 69
BbvI GCAGC 6 cut(s) 711, 718, 721, 877, 928, 931
BccI CCATC 2 cut(s) 655, 1055
BceAI ACGGC 1 cut(s) 311
BcgI CGANNNNNNTGC 2 cut(s) 881, 915
BciT130I CCWGG 4 cut(s) 134, 440, 602, 608
BcnI CCSGG 2 cut(s) 372, 373
BcoDI GTCTC 3 cut(s) 277, 329, 944
BfaI CTAG 1 cut(s) 978
BfuAI ACCTGC 1 cut(s) 139
BglII AGATCT 1 cut(s) 385
Bme1390I CCNGG 6 cut(s) 134, 372, 373, 440, 602, 608
Bme18I GGWCC 2 cut(s) 375, 574
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 5 cut(s) 137, 375, 574, 604, 1065
BmiI GGNNCC 6 cut(s) 138, 357, 376, 575, 753, 1066
BmrFI CCNGG 6 cut(s) 134, 372, 373, 440, 602, 608
BmrI ACTGGG 1 cut(s) 532
BmsI GCATC 3 cut(s) 208, 852, 979
BmuI ACTGGG 1 cut(s) 532
BoxI GACNNNNGTC 1 cut(s) 411
BpiI GAAGAC 1 cut(s) 164
BplI GAGNNNNNCTC 2 cut(s) 736, 768
BpmI CTGGAG 1 cut(s) 68
Bpu10I CCTNAGC 2 cut(s) 69, 456
BpuMI CCSGG 2 cut(s) 372, 373
BsaBI GATNNNNATC 1 cut(s) 1011
BsaJI CCNNGG 9 cut(s) 132, 133, 291, 371, 439, 601, 711, 738, 918
BsaWI WCCGGW 1 cut(s) 1017
Bsc4I CCNNNNNNNGG 5 cut(s) 440, 544, 607, 823, 978
Bse1I ACTGG 3 cut(s) 143, 192, 538
Bse21I CCTNAGG 1 cut(s) 360
Bse8I GATNNNNATC 1 cut(s) 1011
BseBI CCWGG 4 cut(s) 134, 440, 602, 608
BseDI CCNNGG 9 cut(s) 132, 133, 291, 371, 439, 601, 711, 738, 918
BseGI GGATG 5 cut(s) 112, 666, 832, 991, 1066
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 5 cut(s) 440, 544, 607, 823, 978
BseMII CTCAG 5 cut(s) 17, 60, 351, 470, 886
BseNI ACTGG 3 cut(s) 143, 192, 538
BsePI GCGCGC 1 cut(s) 937
BseRI GAGGAG 2 cut(s) 704, 728
BseXI GCAGC 6 cut(s) 711, 718, 721, 877, 928, 931
BsgI GTGCAG 1 cut(s) 167
Bsh1236I CGCG 3 cut(s) 405, 417, 939
Bsh1285I CGRYCG 2 cut(s) 409, 905
BshFI GGCC 4 cut(s) 139, 606, 710, 1067
BsiEI CGRYCG 2 cut(s) 409, 905
BsiHKAI GWGCWC 2 cut(s) 199, 205
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 2 cut(s) 372, 1018
BslFI GGGAC 1 cut(s) 129
BslI CCNNNNNNNGG 5 cut(s) 440, 544, 607, 823, 978
BsmAI GTCTC 3 cut(s) 277, 329, 944
BsmBI CGTCTC 1 cut(s) 277
BsmFI GGGAC 1 cut(s) 129
BsmI GAATGC 3 cut(s) 595, 620, 927
BsnI GGCC 4 cut(s) 139, 606, 710, 1067
BsoBI CYCGRG 1 cut(s) 371
Bsp1286I GDGCHC 2 cut(s) 199, 205
Bsp143I GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
Bsp68I TCGCGA 1 cut(s) 405
BspACI CCGC 6 cut(s) 140, 221, 391, 409, 982, 1001
BspANI GGCC 4 cut(s) 139, 606, 710, 1067
BspCNI CTCAG 5 cut(s) 18, 61, 352, 469, 885
BspFNI CGCG 3 cut(s) 405, 417, 939
BspHI TCATGA 1 cut(s) 651
BspLI GGNNCC 6 cut(s) 138, 357, 376, 575, 753, 1066
BspMI ACCTGC 1 cut(s) 139
BspPI GGATC 2 cut(s) 425, 1014
BsrI ACTGG 3 cut(s) 143, 192, 538
BssECI CCNNGG 9 cut(s) 132, 133, 291, 371, 439, 601, 711, 738, 918
BssHII GCGCGC 1 cut(s) 937
BssMI GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
BssSI CACGAG 1 cut(s) 198
BssT1I CCWWGG 2 cut(s) 738, 918
Bst2BI CACGAG 1 cut(s) 198
Bst2UI CCWGG 4 cut(s) 134, 440, 602, 608
Bst4CI ACNGT 5 cut(s) 292, 299, 398, 767, 818
BstC8I GCNNGC 8 cut(s) 167, 205, 633, 697, 844, 935, 939, 969
BstDEI CTNAG 5 cut(s) 26, 69, 360, 456, 872
BstDSI CCRYGG 1 cut(s) 291
BstEII GGTNACC 1 cut(s) 313
BstF5I GGATG 5 cut(s) 112, 666, 832, 991, 1066
BstFNI CGCG 3 cut(s) 405, 417, 939
BstHHI GCGC 3 cut(s) 103, 939, 941
BstKTI GATC 6 cut(s) 268, 388, 433, 651, 677, 1009
BstMAI GTCTC 3 cut(s) 277, 329, 944
BstMBI GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
BstMCI CGRYCG 2 cut(s) 409, 905
BstMWI GCNNNNNNNGC 4 cut(s) 100, 145, 550, 998
BstNI CCWGG 4 cut(s) 134, 440, 602, 608
BstNSI RCATGY 2 cut(s) 122, 185
BstPAI GACNNNNGTC 1 cut(s) 411
BstPI GGTNACC 1 cut(s) 313
BstSCI CCNGG 6 cut(s) 132, 370, 371, 438, 600, 606
BstUI CGCG 3 cut(s) 405, 417, 939
BstV1I GCAGC 6 cut(s) 711, 718, 721, 877, 928, 931
BstV2I GAAGAC 1 cut(s) 164
BstX2I RGATCY 3 cut(s) 385, 430, 1006
BstXI CCANNNNNNTGG 3 cut(s) 329, 500, 769
BstYI RGATCY 3 cut(s) 385, 430, 1006
Bsu36I CCTNAGG 1 cut(s) 360
BsuRI GGCC 4 cut(s) 139, 606, 710, 1067
BtgI CCRYGG 1 cut(s) 291
BtgZI GCGATG 1 cut(s) 386
BtsCI GGATG 5 cut(s) 112, 666, 832, 991, 1066
BtsI GCAGTG 1 cut(s) 690
BtsIMutI CAGTG 5 cut(s) 150, 199, 304, 690, 772
BtuMI TCGCGA 1 cut(s) 405
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 8 cut(s) 167, 205, 633, 697, 844, 935, 939, 969
CciI TCATGA 1 cut(s) 651
CfoI GCGC 3 cut(s) 103, 939, 941
Cfr13I GGNCC 5 cut(s) 137, 375, 574, 604, 1065
Cfr9I CCCGGG 1 cut(s) 371
CseI GACGC 1 cut(s) 158
CviAII CATG 8 cut(s) 43, 95, 119, 182, 484, 494, 578, 652
DdeI CTNAG 5 cut(s) 26, 69, 360, 456, 872
DpnI GATC 6 cut(s) 267, 387, 432, 650, 676, 1008
DpnII GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
Eco130I CCWWGG 2 cut(s) 738, 918
Eco47I GGWCC 2 cut(s) 375, 574
Eco57I CTGAAG 1 cut(s) 569
Eco81I CCTNAGG 1 cut(s) 360
Eco88I CYCGRG 1 cut(s) 371
Eco91I GGTNACC 1 cut(s) 313
EcoO109I RGGNCCY 1 cut(s) 1065
EcoO65I GGTNACC 1 cut(s) 313
EcoRII CCWGG 4 cut(s) 132, 438, 600, 606
EcoT14I CCWWGG 2 cut(s) 738, 918
EcoT22I ATGCAT 1 cut(s) 183
ErhI CCWWGG 2 cut(s) 738, 918
Esp3I CGTCTC 1 cut(s) 277
FaeI CATG 8 cut(s) 46, 98, 122, 185, 487, 497, 581, 655
FaqI GGGAC 1 cut(s) 129
FatI CATG 8 cut(s) 42, 94, 118, 181, 483, 493, 577, 651
FauI CCCGC 1 cut(s) 975
FokI GGATG 5 cut(s) 119, 673, 839, 998, 1073
FspBI CTAG 1 cut(s) 978
GlaI GCGC 3 cut(s) 102, 938, 940
GsuI CTGGAG 1 cut(s) 68
HaeIII GGCC 4 cut(s) 139, 606, 710, 1067
HapII CCGG 2 cut(s) 372, 1018
HgaI GACGC 1 cut(s) 158
HhaI GCGC 3 cut(s) 103, 939, 941
Hin1II CATG 8 cut(s) 46, 98, 122, 185, 487, 497, 581, 655
Hin6I GCGC 3 cut(s) 101, 937, 939
HinP1I GCGC 3 cut(s) 101, 937, 939
HincII GTYRAC 1 cut(s) 814
HindII GTYRAC 1 cut(s) 814
HpaII CCGG 2 cut(s) 372, 1018
HphI GGTGA 4 cut(s) 167, 263, 325, 344
Hpy166II GTNNAC 4 cut(s) 295, 481, 814, 821
Hpy188I TCNGA 5 cut(s) 27, 345, 379, 588, 1060
Hpy8I GTNNAC 4 cut(s) 295, 481, 814, 821
HpyAV CCTTC 3 cut(s) 651, 871, 1063
HpyCH4III ACNGT 5 cut(s) 292, 299, 398, 767, 818
HpyCH4V TGCA 9 cut(s) 148, 181, 214, 367, 544, 802, 865, 927, 1072
HpyF10VI GCNNNNNNNGC 4 cut(s) 100, 145, 550, 998
HpyF3I CTNAG 5 cut(s) 26, 69, 360, 456, 872
Hsp92II CATG 8 cut(s) 46, 98, 122, 185, 487, 497, 581, 655
HspAI GCGC 3 cut(s) 101, 937, 939
Kzo9I GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
LmnI GCTCC 5 cut(s) 361, 550, 670, 721, 757
Lsp1109I GCAGC 6 cut(s) 711, 718, 721, 877, 928, 931
LweI GCATC 3 cut(s) 208, 852, 979
MaeI CTAG 1 cut(s) 978
MaeIII GTNAC 2 cut(s) 32, 313
MalI GATC 6 cut(s) 267, 387, 432, 650, 676, 1008
MboI GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
MboII GAAGA 5 cut(s) 86, 164, 392, 395, 1051
MflI RGATCY 3 cut(s) 385, 430, 1006
MhlI GDGCHC 2 cut(s) 199, 205
MluCI AATT 3 cut(s) 487, 636, 796
MmeI TCCRAC 2 cut(s) 648, 699
Mph1103I ATGCAT 1 cut(s) 183
MseI TTAA 1 cut(s) 639
MslI CAYNNNNRTG 1 cut(s) 290
MspI CCGG 2 cut(s) 372, 1018
MspR9I CCNGG 6 cut(s) 134, 372, 373, 440, 602, 608
Mva1269I GAATGC 3 cut(s) 595, 620, 927
MvaI CCWGG 4 cut(s) 134, 440, 602, 608
MvnI CGCG 3 cut(s) 405, 417, 939
MwoI GCNNNNNNNGC 4 cut(s) 100, 145, 550, 998
NciI CCSGG 2 cut(s) 372, 373
NdeII GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
NlaIII CATG 8 cut(s) 46, 98, 122, 185, 487, 497, 581, 655
NlaIV GGNNCC 6 cut(s) 138, 357, 376, 575, 753, 1066
NmeAIII GCCGAG 3 cut(s) 736, 913, 973
NmuCI GTSAC 2 cut(s) 32, 313
NruI TCGCGA 1 cut(s) 405
NsiI ATGCAT 1 cut(s) 183
NspI RCATGY 2 cut(s) 122, 185
PagI TCATGA 1 cut(s) 651
PaqCI CACCTGC 1 cut(s) 139
PasI CCCWGGG 1 cut(s) 133
PauI GCGCGC 1 cut(s) 937
PctI GAATGC 3 cut(s) 595, 620, 927
PshAI GACNNNNGTC 1 cut(s) 411
PshBI ATTAAT 1 cut(s) 639
Psp6I CCWGG 4 cut(s) 132, 438, 600, 606
PspEI GGTNACC 1 cut(s) 313
PspGI CCWGG 4 cut(s) 132, 438, 600, 606
PspN4I GGNNCC 6 cut(s) 138, 357, 376, 575, 753, 1066
PspPI GGNCC 5 cut(s) 137, 375, 574, 604, 1065
PsrI GAACNNNNNNTAC 2 cut(s) 473, 505
PsuI RGATCY 3 cut(s) 385, 430, 1006
PteI GCGCGC 1 cut(s) 937
RruI TCGCGA 1 cut(s) 405
RseI CAYNNNNRTG 1 cut(s) 290
SaqAI TTAA 1 cut(s) 639
Sau3AI GATC 6 cut(s) 265, 385, 430, 648, 674, 1006
Sau96I GGNCC 5 cut(s) 137, 375, 574, 604, 1065
ScrFI CCNGG 6 cut(s) 134, 372, 373, 440, 602, 608
SduI GDGCHC 2 cut(s) 199, 205
SfaNI GCATC 3 cut(s) 208, 852, 979
SinI GGWCC 2 cut(s) 375, 574
SmaI CCCGGG 1 cut(s) 373
SmiMI CAYNNNNRTG 1 cut(s) 290
Sse9I AATT 3 cut(s) 487, 636, 796
SsiI CCGC 6 cut(s) 140, 221, 391, 409, 982, 1001
SspMI CTAG 1 cut(s) 978
StyD4I CCNGG 6 cut(s) 132, 370, 371, 438, 600, 606
StyI CCWWGG 2 cut(s) 738, 918
TaaI ACNGT 5 cut(s) 292, 299, 398, 767, 818
TaqI TCGA 4 cut(s) 87, 561, 905, 1076
TaqII GACCGA 1 cut(s) 891
TasI AATT 3 cut(s) 487, 636, 796
TauI GCSGC 2 cut(s) 142, 224
Tru1I TTAA 1 cut(s) 639
Tru9I TTAA 1 cut(s) 639
TscAI CASTG 5 cut(s) 150, 199, 304, 690, 772
TseFI GTSAC 2 cut(s) 32, 313
TseI GCWGC 8 cut(s) 4, 7, 699, 731, 734, 865, 941, 944
Tsp45I GTSAC 2 cut(s) 32, 313
TspDTI ATGAA 2 cut(s) 500, 1058
TspGWI ACGGA 1 cut(s) 423
TspMI CCCGGG 1 cut(s) 371
TspRI CASTG 5 cut(s) 150, 199, 304, 690, 772
VpaK11BI GGWCC 2 cut(s) 375, 574
VspI ATTAAT 1 cut(s) 639
XceI RCATGY 2 cut(s) 122, 185
XcmI CCANNNNNNNNNTGG 1 cut(s) 769
XmaI CCCGGG 1 cut(s) 371
XspI CTAG 1 cut(s) 978
Zsp2I ATGCAT 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.