Rmu_sc0007618.1_g000025

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007618.1
OG0000075
Physical Location & Seq
Reverse (-)
85034 .. 88024
2991 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007618.1_g000025.1.cds

Sequence Viewer

Length: 2058 bp
atggagcgtgagaaccccagtctcgataggcgagagggttcctctagtggaggggaaggaacctcccatggacgtgttggtgcatctcgtggcgggggagaaggtgcttcttgcaatcgcaatggaggtggttcccgcgggggcactgctggtgatcccaggggagttggcgagggcgatgcccgaggaagtggtgggggagctccgcgagggaatgacgtggaggtgttggagatcctgcatacgcccagtgggcagttgcgcattggtgatacaccgattgatcagcctggttcgagtatgaaggaggagcagattgccgaaatgaggactacttgggagatttcggacaacttatgggttgacgttcccgttacccaaggaattacagtctctgctgtcttgcttgaatatatcggtagggcagctatcgcccaatgtgttgaggcagataatgggagtattactgctgtggaagttgaggcgcgcggccacgccattatcgaagacttgtcgtcgaacatttatgcacattggcgggggagaccgtgcttagtaggtgtcgcatgtggcgagggtgatgggtgcattttcagaaggggttatattacttgtgtaggcttccgatatacgagagatttgagttggggaggtttccgggtgtgggtttctccttttgctttgtgtgctgttatatgccgtgtgttattcttactgatattgtttgtttctttctcagcggatataccgagtgaggtaccgagcaagagcaacgccccatataatgatgtagaccctgatactattattcaagggttgttgcgagaatcacagacggcgaggcgagtggacattgacctgccagatacggtgtgtgtgacagatcaccggcgggccgaggaagaggttggagccaaggggcacgaggttcaaggtgctcgggagccgaccctagttgcccaggagcagcccatgaaggttggcgaggtgggaggggaggatcttggtgaggtggtgcgggactcaaatcccacggtggatgtggagatctctatcgaggagttgttggaggcgctggaaaccatttttggtgatgacattggcaatcctgtctcgctggaagtcgtcattgtggataggagaaaggcggaggggaccagccaagccgttggcgagacaggtctgccagtcgaggtacctgtggtgcagcccgagtctggagagggtataatcggggttgctcaagttaccgaggcgggaacccaagatggggagggggatggagtccgagtgttggagacctgtgctagtacggatgatgtcaggtcgaggaagaggacggcctcgcagcttcttcttgggattcccccagttggtgtcgctattgacactcgtggtagtaagaggtctcgggttgataatgtatcgcgctcgagatctaccagtgggaactcgcagggttctcgcgatgaggttgctgggggcctcgcgcgtacattaggggagattgggattatggacggtgccatccttcatatggttacttatttgcggaattgtcatctcgatcgcagtcgcatgagtgcggaagatccatgcctggggtacagggaggcccgggagagcctgatgaggagtgtattagaccaaggtcaggtggaacgcgatgatatgaggcgggcaattgatgatgggattgcgagaagaatggagttggagcgggcactcgcggtggaggaggctcgccgccaagaggctgagaatgttattgctctgttgagggagtccaacttggatcttaccgggaagctacaacgggtccgagaacgtgacgtcaagttggagcttcaggcagccgccttggaaagtttggctccttatcccgatcgtgtggtggatttggaggggcagtctgggaatctgcaaagggaggttgaccgtttacgagatgttgagtttgaagcaggcgagaaggaggcagagatggagcggctcaggaaggagttagccgagcaacagattcggtcgagtagctttgtcgaagaatgcatgagctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

685

Amino Acids

74.02

Weight (kDa)

4.73

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1836
Acc16I TGCGCA 1 cut(s) 263
Acc36I ACCTGC 1 cut(s) 867
Acc65I GGTACC 2 cut(s) 757, 1195
AccB1I GGYRCC 3 cut(s) 757, 1195, 1523
AccBSI CCGCTC 2 cut(s) 1720, 1990
AccI GTMKAC 1 cut(s) 792
AclWI GGATC 5 cut(s) 149, 229, 1008, 1586, 1803
AcoI YGGCCR 1 cut(s) 490
AcuI CTGAAG 1 cut(s) 1832
AcyI GRCGYC 1 cut(s) 1833
AfaI GTAC 5 cut(s) 759, 1197, 1312, 1495, 1607
AflIII ACRYGT 1 cut(s) 73
AgsI TTSAA 4 cut(s) 410, 812, 932, 1961
AhdI GACNNNNNGTC 1 cut(s) 514
AjiI CACGTC 2 cut(s) 74, 220
AjnI CCWGG 4 cut(s) 158, 289, 960, 1599
AjuI GAANNNNNNNTTGG 2 cut(s) 1071, 1103
AluBI AGCT 7 cut(s) 203, 428, 1351, 1810, 1846, 2034, 2055
AluI AGCT 7 cut(s) 203, 428, 1351, 1810, 1846, 2034, 2055
Alw21I GWGCWC 2 cut(s) 205, 940
Alw26I GTCTC 7 cut(s) 26, 397, 538, 1117, 1169, 1292, 1413
AlwI GGATC 5 cut(s) 149, 229, 1008, 1586, 1803
AlwNI CAGNNNCTG 1 cut(s) 395
Ama87I CYCGRG 6 cut(s) 183, 939, 1211, 1410, 1432, 1617
AoxI GGCC 5 cut(s) 490, 894, 1341, 1483, 1614
ApeKI GCWGC 5 cut(s) 425, 967, 1207, 1348, 1853
Asp718I GGTACC 2 cut(s) 757, 1195
AspLEI GCGC 6 cut(s) 264, 487, 489, 1075, 1431, 1492
AspS9I GGNCC 5 cut(s) 894, 1155, 1483, 1615, 1819
AsuC2I CCSGG 4 cut(s) 659, 1618, 1619, 1804
AsuHPI GGTGA 6 cut(s) 164, 281, 590, 878, 1019, 1103
AvaI CYCGRG 6 cut(s) 183, 939, 1211, 1410, 1432, 1617
AvaII GGWCC 2 cut(s) 1155, 1819
BaeGI GKGCMC 3 cut(s) 146, 924, 1726
BanI GGYRCC 3 cut(s) 757, 1195, 1523
BanII GRGCYC 1 cut(s) 205
BauI CACGAG 3 cut(s) 87, 923, 1392
BbsI GAAGAC 1 cut(s) 513
Bbv12I GWGCWC 2 cut(s) 205, 940
BbvI GCAGC 5 cut(s) 437, 979, 1219, 1360, 1865
BccI CCATC 6 cut(s) 575, 1262, 1274, 1535, 1685, 1978
BceAI ACGGC 4 cut(s) 684, 852, 1151, 1356
BcgI CGANNNNNNTGC 8 cut(s) 161, 195, 1445, 1457, 1479, 1491, 2003, 2037
BciT130I CCWGG 4 cut(s) 160, 291, 962, 1601
BclI TGATCA 1 cut(s) 283
BcnI CCSGG 4 cut(s) 659, 1618, 1619, 1804
BcoDI GTCTC 7 cut(s) 26, 397, 538, 1117, 1169, 1292, 1413
BfaI CTAG 3 cut(s) 45, 953, 1308
BfoI RGCGCY 1 cut(s) 1076
BfuAI ACCTGC 1 cut(s) 867
BglI GCCNNNNNGGC 1 cut(s) 253
BglII AGATCT 2 cut(s) 1047, 1436
BisI GCNGC 9 cut(s) 426, 490, 968, 1208, 1349, 1747, 1854, 1857, 1991
BlsI GCNGC 9 cut(s) 427, 491, 969, 1209, 1350, 1748, 1855, 1858, 1992
Bme1390I CCNGG 8 cut(s) 160, 291, 659, 962, 1601, 1618, 1619, 1804
Bme18I GGWCC 2 cut(s) 1155, 1819
BmeRI GACNNNNNGTC 1 cut(s) 514
BmeT110I CYCGRG 6 cut(s) 183, 939, 1211, 1410, 1432, 1617
BmgBI CACGTC 2 cut(s) 74, 220
BmgT120I GGNCC 5 cut(s) 894, 1155, 1483, 1615, 1819
BmrFI CCNGG 8 cut(s) 160, 291, 659, 962, 1601, 1618, 1619, 1804
BmrI ACTGGG 3 cut(s) 12, 243, 1364
BmsI GCATC 2 cut(s) 92, 169
BmuI ACTGGG 3 cut(s) 12, 243, 1364
BoxI GACNNNNGTC 1 cut(s) 1650
BpiI GAAGAC 1 cut(s) 513
BplI GAGNNNNNCTC 2 cut(s) 26, 58
BpmI CTGGAG 1 cut(s) 1239
Bpu10I CCTNAGC 1 cut(s) 1994
BpuEI CTTGAG 1 cut(s) 1227
BpuMI CCSGG 4 cut(s) 659, 1618, 1619, 1804
BsaBI GATNNNNATC 1 cut(s) 1052
BsaHI GRCGYC 1 cut(s) 1833
BsaI GGTCTC 3 cut(s) 538, 1292, 1413
BsaXI ACNNNNNCTCC 4 cut(s) 1275, 1305, 1895, 1925
Bse118I RCCGGY 1 cut(s) 888
Bse1I ACTGG 5 cut(s) 18, 249, 1187, 1370, 1443
Bse3DI GCAATG 1 cut(s) 127
Bse8I GATNNNNATC 1 cut(s) 1052
BseBI CCWGG 4 cut(s) 160, 291, 962, 1601
BseGI GGATG 4 cut(s) 1045, 1285, 1321, 1527
BseJI GATNNNNATC 1 cut(s) 1052
BseMI GCAATG 1 cut(s) 127
BseMII CTCAG 3 cut(s) 750, 1749, 2008
BseNI ACTGG 5 cut(s) 18, 249, 1187, 1370, 1443
BsePI GCGCGC 1 cut(s) 485
BseRI GAGGAG 4 cut(s) 323, 1073, 1648, 1751
BseSI GKGCMC 3 cut(s) 146, 924, 1726
BseXI GCAGC 5 cut(s) 437, 979, 1219, 1360, 1865
BseYI CCCAGC 1 cut(s) 1478
BsgI GTGCAG 1 cut(s) 1226
Bsh1285I CGRYCG 3 cut(s) 1570, 1888, 2027
BshFI GGCC 5 cut(s) 492, 896, 1343, 1485, 1616
BshNI GGYRCC 3 cut(s) 757, 1195, 1523
BsiEI CGRYCG 3 cut(s) 1570, 1888, 2027
BsiHKAI GWGCWC 2 cut(s) 205, 940
BsiHKCI CYCGRG 6 cut(s) 183, 939, 1211, 1410, 1432, 1617
BsiSI CCGG 4 cut(s) 658, 889, 1618, 1803
BslFI GGGAC 2 cut(s) 1034, 1168
BsmAI GTCTC 7 cut(s) 26, 397, 538, 1117, 1169, 1292, 1413
BsmFI GGGAC 2 cut(s) 1034, 1168
BsmI GAATGC 1 cut(s) 2051
BsnI GGCC 5 cut(s) 492, 896, 1343, 1485, 1616
Bso31I GGTCTC 3 cut(s) 538, 1292, 1413
BsoBI CYCGRG 6 cut(s) 183, 939, 1211, 1410, 1432, 1617
Bsp1286I GDGCHC 5 cut(s) 146, 205, 924, 940, 1726
Bsp19I CCATGG 1 cut(s) 67
Bsp68I TCGCGA 1 cut(s) 1467
BspANI GGCC 5 cut(s) 492, 896, 1343, 1485, 1616
BspCNI CTCAG 3 cut(s) 749, 1750, 2007
BspMI ACCTGC 1 cut(s) 867
BspPI GGATC 5 cut(s) 149, 229, 1008, 1586, 1803
BspT107I GGYRCC 3 cut(s) 757, 1195, 1523
BspTNI GGTCTC 3 cut(s) 538, 1292, 1413
BsrBI CCGCTC 2 cut(s) 1720, 1990
BsrDI GCAATG 1 cut(s) 127
BsrFI RCCGGY 1 cut(s) 888
BsrI ACTGG 5 cut(s) 18, 249, 1187, 1370, 1443
BssAI RCCGGY 1 cut(s) 888
BssHII GCGCGC 1 cut(s) 485
BssNI GRCGYC 1 cut(s) 1833
BssSI CACGAG 3 cut(s) 87, 923, 1392
BssT1I CCWWGG 5 cut(s) 67, 379, 915, 1648, 1860
Bst2BI CACGAG 3 cut(s) 87, 923, 1392
Bst2UI CCWGG 4 cut(s) 160, 291, 962, 1601
Bst4CI ACNGT 6 cut(s) 391, 549, 871, 1036, 1523, 1940
Bst6I CTCTTC 2 cut(s) 897, 1328
BstACI GRCGYC 1 cut(s) 1833
BstC8I GCNNGC 6 cut(s) 487, 894, 1680, 1722, 1744, 1966
BstDEI CTNAG 4 cut(s) 553, 736, 1758, 1994
BstDSI CCRYGG 3 cut(s) 67, 136, 1032
BstF5I GGATG 4 cut(s) 1045, 1285, 1321, 1527
BstH2I RGCGCY 1 cut(s) 1076
BstHHI GCGC 6 cut(s) 264, 487, 489, 1075, 1431, 1492
BstMAI GTCTC 7 cut(s) 26, 397, 538, 1117, 1169, 1292, 1413
BstMCI CGRYCG 3 cut(s) 1570, 1888, 2027
BstMWI GCNNNNNNNGC 3 cut(s) 253, 431, 686
BstNI CCWGG 4 cut(s) 160, 291, 962, 1601
BstNSI RCATGY 1 cut(s) 570
BstPAI GACNNNNGTC 1 cut(s) 1650
BstSCI CCNGG 8 cut(s) 158, 289, 657, 960, 1599, 1616, 1617, 1802
BstSLI GKGCMC 3 cut(s) 146, 924, 1726
BstV1I GCAGC 5 cut(s) 437, 979, 1219, 1360, 1865
BstV2I GAAGAC 1 cut(s) 513
BstX2I RGATCY 6 cut(s) 234, 1000, 1047, 1436, 1591, 1795
BstXI CCANNNNNNTGG 1 cut(s) 1169
BstYI RGATCY 6 cut(s) 234, 1000, 1047, 1436, 1591, 1795
BsuRI GGCC 5 cut(s) 492, 896, 1343, 1485, 1616
BtgI CCRYGG 3 cut(s) 67, 136, 1032
BtgZI GCGATG 3 cut(s) 192, 1482, 1680
BtrI CACGTC 2 cut(s) 74, 220
BtsCI GGATG 4 cut(s) 1045, 1285, 1321, 1527
BtsI GCAGTG 1 cut(s) 144
BtsIMutI CAGTG 3 cut(s) 144, 256, 1450
BtuMI TCGCGA 1 cut(s) 1467
BveI ACCTGC 1 cut(s) 867
Cac8I GCNNGC 6 cut(s) 487, 894, 1680, 1722, 1744, 1966
CaiI CAGNNNCTG 1 cut(s) 395
CfoI GCGC 6 cut(s) 264, 487, 489, 1075, 1431, 1492
Cfr10I RCCGGY 1 cut(s) 888
Cfr13I GGNCC 5 cut(s) 894, 1155, 1483, 1615, 1819
Cfr42I CCGCGG 1 cut(s) 139
Cfr9I CCCGGG 1 cut(s) 1617
Csp6I GTAC 5 cut(s) 758, 1196, 1311, 1494, 1606
CspCI CAANNNNNGTGG 2 cut(s) 109, 144
CviAII CATG 6 cut(s) 68, 567, 973, 1579, 1596, 2050
CviQI GTAC 5 cut(s) 758, 1196, 1311, 1494, 1606
DdeI CTNAG 4 cut(s) 553, 736, 1758, 1994
DriI GACNNNNNGTC 1 cut(s) 514
EaeI YGGCCR 1 cut(s) 490
Eam1104I CTCTTC 2 cut(s) 897, 1328
Eam1105I GACNNNNNGTC 1 cut(s) 514
EarI CTCTTC 2 cut(s) 897, 1328
EciI GGCGGA 1 cut(s) 1163
Ecl136II GAGCTC 1 cut(s) 203
Eco130I CCWWGG 5 cut(s) 67, 379, 915, 1648, 1860
Eco24I GRGCYC 1 cut(s) 205
Eco31I GGTCTC 3 cut(s) 538, 1292, 1413
Eco47I GGWCC 2 cut(s) 1155, 1819
Eco53kI GAGCTC 1 cut(s) 203
Eco57I CTGAAG 1 cut(s) 1832
Eco88I CYCGRG 6 cut(s) 183, 939, 1211, 1410, 1432, 1617
EcoICRI GAGCTC 1 cut(s) 203
EcoO109I RGGNCCY 1 cut(s) 1483
EcoRII CCWGG 4 cut(s) 158, 289, 960, 1599
EcoT14I CCWWGG 5 cut(s) 67, 379, 915, 1648, 1860
EcoT22I ATGCAT 1 cut(s) 2051
EcoT38I GRGCYC 1 cut(s) 205
ErhI CCWWGG 5 cut(s) 67, 379, 915, 1648, 1860
FaeI CATG 6 cut(s) 71, 570, 976, 1582, 1599, 2053
FaqI GGGAC 2 cut(s) 1034, 1168
FatI CATG 6 cut(s) 67, 566, 972, 1578, 1595, 2049
FauI CCCGC 9 cut(s) 86, 131, 143, 531, 885, 1011, 1249, 1671, 1713
FauNDI CATATG 1 cut(s) 1536
FbaI TGATCA 1 cut(s) 283
FblI GTMKAC 1 cut(s) 792
Fnu4HI GCNGC 9 cut(s) 426, 490, 968, 1208, 1349, 1747, 1854, 1857, 1991
FokI GGATG 4 cut(s) 1052, 1292, 1328, 1514
FriOI GRGCYC 1 cut(s) 205
Fsp4HI GCNGC 9 cut(s) 426, 490, 968, 1208, 1349, 1747, 1854, 1857, 1991
FspBI CTAG 3 cut(s) 45, 953, 1308
FspI TGCGCA 1 cut(s) 263
GlaI GCGC 6 cut(s) 263, 486, 488, 1074, 1430, 1491
GluI GCNGC 9 cut(s) 426, 490, 968, 1208, 1349, 1747, 1854, 1857, 1991
GsaI CCCAGC 1 cut(s) 1482
GsuI CTGGAG 1 cut(s) 1239
HaeII RGCGCY 1 cut(s) 1076
HaeIII GGCC 5 cut(s) 492, 896, 1343, 1485, 1616
HapII CCGG 4 cut(s) 658, 889, 1618, 1803
HhaI GCGC 6 cut(s) 264, 487, 489, 1075, 1431, 1492
Hin1I GRCGYC 1 cut(s) 1833
Hin1II CATG 6 cut(s) 71, 570, 976, 1582, 1599, 2053
Hin6I GCGC 6 cut(s) 262, 485, 487, 1073, 1429, 1490
HinP1I GCGC 6 cut(s) 262, 485, 487, 1073, 1429, 1490
HincII GTYRAC 2 cut(s) 364, 1936
HindII GTYRAC 2 cut(s) 364, 1936
HinfI GANTC 8 cut(s) 827, 1022, 1214, 1284, 1363, 1784, 1918, 2020
HpaII CCGG 4 cut(s) 658, 889, 1618, 1803
HphI GGTGA 6 cut(s) 164, 281, 590, 878, 1019, 1103
Hpy166II GTNNAC 5 cut(s) 364, 793, 850, 1936, 1943
Hpy188I TCNGA 5 cut(s) 349, 596, 626, 1289, 1823
Hpy188III TCNNGA 8 cut(s) 23, 941, 1218, 1434, 1466, 1565, 1883, 1996
Hpy8I GTNNAC 5 cut(s) 364, 793, 850, 1936, 1943
Hpy99I CGWCG 1 cut(s) 520
HpyAV CCTTC 8 cut(s) 50, 95, 298, 591, 970, 1541, 1966, 1993
HpyCH4III ACNGT 6 cut(s) 391, 549, 871, 1036, 1523, 1940
HpyCH4IV ACGT 5 cut(s) 73, 219, 366, 1828, 1833
HpyCH4V TGCA 8 cut(s) 83, 114, 241, 530, 588, 1207, 1924, 2049
HpyF10VI GCNNNNNNNGC 3 cut(s) 253, 431, 686
HpyF3I CTNAG 4 cut(s) 553, 736, 1758, 1994
HpySE526I ACGT 5 cut(s) 73, 219, 366, 1828, 1833
Hsp92I GRCGYC 1 cut(s) 1833
Hsp92II CATG 6 cut(s) 71, 570, 976, 1582, 1599, 2053
HspAI GCGC 6 cut(s) 262, 485, 487, 1073, 1429, 1490
KpnI GGTACC 2 cut(s) 761, 1199
Ksp22I TGATCA 1 cut(s) 283
KspI CCGCGG 1 cut(s) 139
Lsp1109I GCAGC 5 cut(s) 437, 979, 1219, 1360, 1865
LweI GCATC 2 cut(s) 92, 169
MaeI CTAG 3 cut(s) 45, 953, 1308
MaeII ACGT 5 cut(s) 73, 219, 366, 1828, 1833
MaeIII GTNAC 5 cut(s) 373, 877, 1246, 1540, 1829
MbiI CCGCTC 2 cut(s) 1720, 1990
MboII GAAGA 7 cut(s) 518, 914, 1345, 1346, 1601, 1716, 2054
MfeI CAATTG 1 cut(s) 1683
MflI RGATCY 6 cut(s) 234, 1000, 1047, 1436, 1591, 1795
MhlI GDGCHC 5 cut(s) 146, 205, 924, 940, 1726
MluCI AATT 3 cut(s) 384, 1555, 1683
MlyI GAGTC 4 cut(s) 1016, 1223, 1293, 1793
MmeI TCCRAC 7 cut(s) 210, 889, 1047, 1275, 1695, 1812, 1821
Mph1103I ATGCAT 1 cut(s) 2051
MslI CAYNNNNRTG 1 cut(s) 72
MspA1I CMGCKG 2 cut(s) 138, 740
MspI CCGG 4 cut(s) 658, 889, 1618, 1803
MspR9I CCNGG 8 cut(s) 160, 291, 659, 962, 1601, 1618, 1619, 1804
MunI CAATTG 1 cut(s) 1683
Mva1269I GAATGC 1 cut(s) 2051
MvaI CCWGG 4 cut(s) 160, 291, 962, 1601
MwoI GCNNNNNNNGC 3 cut(s) 253, 431, 686
NciI CCSGG 4 cut(s) 659, 1618, 1619, 1804
NcoI CCATGG 1 cut(s) 67
NdeI CATATG 1 cut(s) 1536
NlaIII CATG 6 cut(s) 71, 570, 976, 1582, 1599, 2053
NmeAIII GCCGAG 2 cut(s) 922, 2035
NmuCI GTSAC 2 cut(s) 877, 1829
NruI TCGCGA 1 cut(s) 1467
NsbI TGCGCA 1 cut(s) 263
NsiI ATGCAT 1 cut(s) 2051
NspI RCATGY 1 cut(s) 570
PaeR7I CTCGAG 1 cut(s) 1432
PasI CCCWGGG 1 cut(s) 159
PauI GCGCGC 1 cut(s) 485
PcsI WCGNNNNNNNCGW 2 cut(s) 501, 570
PctI GAATGC 1 cut(s) 2051
PfeI GAWTC 4 cut(s) 827, 1363, 1918, 2020
PkrI GCNGC 9 cut(s) 427, 491, 969, 1209, 1350, 1748, 1855, 1858, 1992
Ple19I CGATCG 2 cut(s) 1570, 1888
PleI GAGTC 4 cut(s) 1016, 1222, 1292, 1792
PpsI GAGTC 4 cut(s) 1016, 1222, 1292, 1792
PshAI GACNNNNGTC 1 cut(s) 1650
Psp124BI GAGCTC 1 cut(s) 205
Psp6I CCWGG 4 cut(s) 158, 289, 960, 1599
PspFI CCCAGC 1 cut(s) 1478
PspGI CCWGG 4 cut(s) 158, 289, 960, 1599
PspPI GGNCC 5 cut(s) 894, 1155, 1483, 1615, 1819
PstNI CAGNNNCTG 1 cut(s) 395
PsuI RGATCY 6 cut(s) 234, 1000, 1047, 1436, 1591, 1795
PteI GCGCGC 1 cut(s) 485
PvuI CGATCG 2 cut(s) 1570, 1888
RruI TCGCGA 1 cut(s) 1467
RsaI GTAC 5 cut(s) 759, 1197, 1312, 1495, 1607
RsaNI GTAC 5 cut(s) 758, 1196, 1311, 1494, 1606
RseI CAYNNNNRTG 1 cut(s) 72
SacI GAGCTC 1 cut(s) 205
SacII CCGCGG 1 cut(s) 139
SatI GCNGC 9 cut(s) 426, 490, 968, 1208, 1349, 1747, 1854, 1857, 1991
Sau96I GGNCC 5 cut(s) 894, 1155, 1483, 1615, 1819
SchI GAGTC 4 cut(s) 1016, 1223, 1293, 1793
ScrFI CCNGG 8 cut(s) 160, 291, 659, 962, 1601, 1618, 1619, 1804
SduI GDGCHC 5 cut(s) 146, 205, 924, 940, 1726
SfaNI GCATC 2 cut(s) 92, 169
Sfr274I CTCGAG 1 cut(s) 1432
Sfr303I CCGCGG 1 cut(s) 139
SgrAI CRCCGGYG 1 cut(s) 888
SgrBI CCGCGG 1 cut(s) 139
SinI GGWCC 2 cut(s) 1155, 1819
SlaI CTCGAG 1 cut(s) 1432
SmaI CCCGGG 1 cut(s) 1619
SmiMI CAYNNNNRTG 1 cut(s) 72
SmlI CTYRAG 2 cut(s) 1242, 1432
SmoI CTYRAG 2 cut(s) 1242, 1432
Sse9I AATT 3 cut(s) 384, 1555, 1683
SspMI CTAG 3 cut(s) 45, 953, 1308
SstI GAGCTC 1 cut(s) 205
StyD4I CCNGG 8 cut(s) 158, 289, 657, 960, 1599, 1616, 1617, 1802
StyI CCWWGG 5 cut(s) 67, 379, 915, 1648, 1860
TaaI ACNGT 6 cut(s) 391, 549, 871, 1036, 1523, 1940
TaiI ACGT 5 cut(s) 76, 222, 369, 1831, 1836
TaqII GACCGA 1 cut(s) 2013
TasI AATT 3 cut(s) 384, 1555, 1683
TauI GCSGC 4 cut(s) 492, 1749, 1859, 1993
TfiI GAWTC 4 cut(s) 827, 1363, 1918, 2020
TscAI CASTG 3 cut(s) 151, 256, 1450
TseFI GTSAC 2 cut(s) 877, 1829
TseI GCWGC 5 cut(s) 425, 967, 1207, 1348, 1853
Tsp45I GTSAC 2 cut(s) 877, 1829
TspDTI ATGAA 3 cut(s) 317, 989, 1523
TspGWI ACGGA 1 cut(s) 1328
TspMI CCCGGG 1 cut(s) 1617
TspRI CASTG 3 cut(s) 151, 256, 1450
VpaK11BI GGWCC 2 cut(s) 1155, 1819
XceI RCATGY 1 cut(s) 570
XcmI CCANNNNNNNNNTGG 3 cut(s) 74, 1039, 1534
XhoI CTCGAG 1 cut(s) 1432
XmaI CCCGGG 1 cut(s) 1617
XmiI GTMKAC 1 cut(s) 792
XspI CTAG 3 cut(s) 45, 953, 1308
ZraI GACGTC 1 cut(s) 1834
Zsp2I ATGCAT 1 cut(s) 2051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.