Rmu_co8491967.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8491967.1
OG0000075
Physical Location & Seq
Forward (+)
1668 .. 2564
897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8491967.1_g000003.1.cds

Sequence Viewer

Length: 789 bp
atgttgttgcctgacgaagtgtatctgagctttcctgatactgtgctggaatatctcaatcagcgggccaaggaagaactcgatgccaaggggcatgaggttcggggtactcaagagccgacgcaagatccccaggagtcgcccattcaggttggggtagcgagcgagcgtcccctacccacagttgaagtggagttctccattgaggagttgctggaagagatggagcgacatcaaaacgatgccagcacccgtacccggctggtgcaagacgcaatgttggaacagctagatgctgtctttagcaaggatgttggcgctccaatctcgcagaaggccatcactgttgacaatggggaggcagaggtaaccagccaggccgttggcgagacaggtctgacgaccgaagttcctgaagtgcaaccgcagtctggagagggcatggttggggttgcccaggttaccgagactgggacccatggccaggatggtgagggggatggggtccgagtgtctgacacatgctcccctacggatggggtagggtcaaagaaaaggactacctcgcaactgcatctcgagagccccctagttggtgtcggtatcgatactcgtggtagcaagactgcgcaggttgataatgtatcgtgctcaagatctacgagtgggggctcgcgaggttctcgcaatgaggttgccaggggtctcgcgcgcaccttgggagagattggaattactgaaagcgccattctgcatatggtcgctgacctgcagaactgtcatctcgtc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

263

Amino Acids

28.06

Weight (kDa)

4.51

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 630
Acc36I ACCTGC 2 cut(s) 622, 777
AccII CGCG 3 cut(s) 676, 710, 712
AciI CCGC 2 cut(s) 64, 425
AclWI GGATC 1 cut(s) 122
AcoI YGGCCR 1 cut(s) 481
AcuI CTGAAG 1 cut(s) 435
AfaI GTAC 2 cut(s) 109, 256
AfiI CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 593
AgsI TTSAA 1 cut(s) 188
AjnI CCWGG 5 cut(s) 132, 375, 456, 483, 698
AluBI AGCT 2 cut(s) 30, 289
AluI AGCT 2 cut(s) 30, 289
Alw21I GWGCWC 1 cut(s) 653
Alw26I GTCTC 3 cut(s) 383, 461, 710
AlwI GGATC 1 cut(s) 122
Ama87I CYCGRG 1 cut(s) 578
AoxI GGCC 4 cut(s) 66, 336, 378, 481
AspLEI GCGC 5 cut(s) 320, 631, 712, 714, 746
AspS9I GGNCC 3 cut(s) 66, 474, 505
AsuC2I CCSGG 1 cut(s) 259
AsuHPI GGTGA 1 cut(s) 503
AvaI CYCGRG 1 cut(s) 578
AvaII GGWCC 2 cut(s) 474, 505
BalI TGGCCA 1 cut(s) 483
BanII GRGCYC 2 cut(s) 587, 674
BauI CACGAG 1 cut(s) 612
Bbv12I GWGCWC 1 cut(s) 653
BccI CCATC 5 cut(s) 217, 347, 482, 494, 530
BceAI ACGGC 1 cut(s) 365
BcgI CGANNNNNNTGC 2 cut(s) 83, 117
BciT130I CCWGG 5 cut(s) 134, 377, 458, 485, 700
BcnI CCSGG 1 cut(s) 259
BcoDI GTCTC 3 cut(s) 383, 461, 710
BfaI CTAG 2 cut(s) 290, 590
BfmI CTRYAG 1 cut(s) 770
BfoI RGCGCY 2 cut(s) 321, 747
BfuAI ACCTGC 2 cut(s) 622, 777
BglII AGATCT 1 cut(s) 656
Bme1390I CCNGG 6 cut(s) 134, 259, 377, 458, 485, 700
Bme18I GGWCC 2 cut(s) 474, 505
BmeT110I CYCGRG 1 cut(s) 578
BmgT120I GGNCC 3 cut(s) 66, 474, 505
BmiI GGNNCC 3 cut(s) 475, 476, 506
BmrFI CCNGG 6 cut(s) 134, 259, 377, 458, 485, 700
BmrI ACTGGG 1 cut(s) 480
BmsI GCATC 4 cut(s) 73, 232, 283, 583
BmuI ACTGGG 1 cut(s) 480
BpmI CTGGAG 1 cut(s) 453
BpuEI CTTGAG 2 cut(s) 96, 637
BpuMI CCSGG 1 cut(s) 259
Bsa29I ATCGAT 1 cut(s) 606
BsaI GGTCTC 1 cut(s) 710
BsaJI CCNNGG 7 cut(s) 69, 87, 132, 456, 478, 699, 717
BsaXI ACNNNNNCTCC 2 cut(s) 509, 539
Bsc4I CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 593
Bse1I ACTGG 1 cut(s) 475
Bse3DI GCAATG 2 cut(s) 282, 694
BseBI CCWGG 5 cut(s) 134, 377, 458, 485, 700
BseCI ATCGAT 1 cut(s) 606
BseDI CCNNGG 7 cut(s) 69, 87, 132, 456, 478, 699, 717
BseGI GGATG 4 cut(s) 316, 493, 505, 541
BseLI CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 593
BseMI GCAATG 2 cut(s) 282, 694
BseMII CTCAG 1 cut(s) 17
BseNI ACTGG 1 cut(s) 475
BsePI GCGCGC 1 cut(s) 710
BseRI GAGGAG 1 cut(s) 221
Bsh1236I CGCG 3 cut(s) 676, 710, 712
Bsh1285I CGRYCG 1 cut(s) 405
BshFI GGCC 4 cut(s) 68, 338, 380, 483
BshVI ATCGAT 1 cut(s) 606
BsiEI CGRYCG 1 cut(s) 405
BsiHKAI GWGCWC 1 cut(s) 653
BsiHKCI CYCGRG 1 cut(s) 578
BsiSI CCGG 1 cut(s) 259
BslFI GGGAC 2 cut(s) 156, 487
BslI CCNNNNNNNGG 6 cut(s) 258, 431, 471, 484, 536, 593
BsmAI GTCTC 3 cut(s) 383, 461, 710
BsmFI GGGAC 2 cut(s) 156, 487
BsnI GGCC 4 cut(s) 68, 338, 380, 483
Bso31I GGTCTC 1 cut(s) 710
BsoBI CYCGRG 1 cut(s) 578
Bsp1286I GDGCHC 3 cut(s) 587, 653, 674
Bsp143I GATC 2 cut(s) 127, 656
Bsp19I CCATGG 1 cut(s) 478
Bsp68I TCGCGA 1 cut(s) 676
BspACI CCGC 2 cut(s) 64, 425
BspANI GGCC 4 cut(s) 68, 338, 380, 483
BspCNI CTCAG 1 cut(s) 18
BspDI ATCGAT 1 cut(s) 606
BspFNI CGCG 3 cut(s) 676, 710, 712
BspLI GGNNCC 3 cut(s) 475, 476, 506
BspMAI CTGCAG 1 cut(s) 774
BspMI ACCTGC 2 cut(s) 622, 777
BspPI GGATC 1 cut(s) 122
BspTNI GGTCTC 1 cut(s) 710
BsrDI GCAATG 2 cut(s) 282, 694
BsrI ACTGG 1 cut(s) 475
BssECI CCNNGG 7 cut(s) 69, 87, 132, 456, 478, 699, 717
BssHII GCGCGC 1 cut(s) 710
BssMI GATC 2 cut(s) 127, 656
BssSI CACGAG 1 cut(s) 612
BssT1I CCWWGG 4 cut(s) 69, 87, 478, 717
Bst2BI CACGAG 1 cut(s) 612
Bst2UI CCWGG 5 cut(s) 134, 377, 458, 485, 700
Bst4CI ACNGT 4 cut(s) 43, 184, 346, 779
Bst6I CTCTTC 1 cut(s) 213
BstC8I GCNNGC 6 cut(s) 66, 163, 167, 247, 674, 712
BstDEI CTNAG 1 cut(s) 26
BstDSI CCRYGG 1 cut(s) 478
BstEII GGTNACC 2 cut(s) 367, 460
BstF5I GGATG 4 cut(s) 316, 493, 505, 541
BstFNI CGCG 3 cut(s) 676, 710, 712
BstH2I RGCGCY 2 cut(s) 321, 747
BstHHI GCGC 5 cut(s) 320, 631, 712, 714, 746
BstKTI GATC 2 cut(s) 130, 659
BstMAI GTCTC 3 cut(s) 383, 461, 710
BstMBI GATC 2 cut(s) 127, 656
BstMCI CGRYCG 1 cut(s) 405
BstNI CCWGG 5 cut(s) 134, 377, 458, 485, 700
BstNSI RCATGY 1 cut(s) 525
BstPI GGTNACC 2 cut(s) 367, 460
BstSCI CCNGG 6 cut(s) 132, 257, 375, 456, 483, 698
BstSFI CTRYAG 1 cut(s) 770
BstUI CGCG 3 cut(s) 676, 710, 712
BstX2I RGATCY 2 cut(s) 127, 656
BstXI CCANNNNNNTGG 1 cut(s) 383
BstYI RGATCY 2 cut(s) 127, 656
Bsu15I ATCGAT 1 cut(s) 606
BsuRI GGCC 4 cut(s) 68, 338, 380, 483
BsuTUI ATCGAT 1 cut(s) 606
BtgI CCRYGG 1 cut(s) 478
BtsCI GGATG 4 cut(s) 316, 493, 505, 541
BtsIMutI CAGTG 1 cut(s) 342
BtuMI TCGCGA 1 cut(s) 676
BveI ACCTGC 2 cut(s) 622, 777
Cac8I GCNNGC 6 cut(s) 66, 163, 167, 247, 674, 712
CfoI GCGC 5 cut(s) 320, 631, 712, 714, 746
Cfr13I GGNCC 3 cut(s) 66, 474, 505
ClaI ATCGAT 1 cut(s) 606
CseI GACGC 3 cut(s) 130, 158, 281
Csp6I GTAC 2 cut(s) 108, 255
CviAII CATG 4 cut(s) 95, 442, 479, 522
CviQI GTAC 2 cut(s) 108, 255
DdeI CTNAG 1 cut(s) 26
DpnI GATC 2 cut(s) 129, 658
DpnII GATC 2 cut(s) 127, 656
EaeI YGGCCR 1 cut(s) 481
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
Eco130I CCWWGG 4 cut(s) 69, 87, 478, 717
Eco24I GRGCYC 2 cut(s) 587, 674
Eco31I GGTCTC 1 cut(s) 710
Eco47I GGWCC 2 cut(s) 474, 505
Eco57I CTGAAG 1 cut(s) 435
Eco88I CYCGRG 1 cut(s) 578
Eco91I GGTNACC 2 cut(s) 367, 460
EcoO109I RGGNCCY 1 cut(s) 474
EcoO65I GGTNACC 2 cut(s) 367, 460
EcoRII CCWGG 5 cut(s) 132, 375, 456, 483, 698
EcoT14I CCWWGG 4 cut(s) 69, 87, 478, 717
EcoT38I GRGCYC 2 cut(s) 587, 674
ErhI CCWWGG 4 cut(s) 69, 87, 478, 717
FaeI CATG 4 cut(s) 98, 445, 482, 525
FaiI YATR 6 cut(s) 96, 443, 480, 523, 756, 758
FaqI GGGAC 2 cut(s) 156, 487
FatI CATG 4 cut(s) 94, 441, 478, 521
FauI CCCGC 1 cut(s) 57
FauNDI CATATG 1 cut(s) 756
FokI GGATG 4 cut(s) 323, 500, 512, 548
FriOI GRGCYC 2 cut(s) 587, 674
FspBI CTAG 2 cut(s) 290, 590
FspI TGCGCA 1 cut(s) 630
GlaI GCGC 5 cut(s) 319, 630, 711, 713, 745
GsuI CTGGAG 1 cut(s) 453
HaeII RGCGCY 2 cut(s) 321, 747
HaeIII GGCC 4 cut(s) 68, 338, 380, 483
HapII CCGG 1 cut(s) 259
HgaI GACGC 3 cut(s) 130, 158, 281
HhaI GCGC 5 cut(s) 320, 631, 712, 714, 746
Hin1II CATG 4 cut(s) 98, 445, 482, 525
Hin6I GCGC 5 cut(s) 318, 629, 710, 712, 744
HinP1I GCGC 5 cut(s) 318, 629, 710, 712, 744
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HinfI GANTC 1 cut(s) 137
HpaII CCGG 1 cut(s) 259
HphI GGTGA 1 cut(s) 503
Hpy166II GTNNAC 1 cut(s) 349
Hpy188I TCNGA 4 cut(s) 27, 399, 509, 517
Hpy188III TCNNGA 8 cut(s) 35, 113, 413, 432, 578, 580, 654, 675
Hpy8I GTNNAC 1 cut(s) 349
Hpy99I CGWCG 1 cut(s) 124
HpyAV CCTTC 1 cut(s) 328
HpyCH4III ACNGT 4 cut(s) 43, 184, 346, 779
HpyCH4V TGCA 5 cut(s) 268, 421, 574, 754, 772
HpyF3I CTNAG 1 cut(s) 26
Hsp92II CATG 4 cut(s) 98, 445, 482, 525
HspAI GCGC 5 cut(s) 318, 629, 710, 712, 744
KflI GGGWCCC 1 cut(s) 474
Kzo9I GATC 2 cut(s) 127, 656
LmnI GCTCC 3 cut(s) 226, 325, 530
LweI GCATC 4 cut(s) 73, 232, 283, 583
MaeI CTAG 2 cut(s) 290, 590
MaeIII GTNAC 2 cut(s) 367, 460
MalI GATC 2 cut(s) 129, 658
MboI GATC 2 cut(s) 127, 656
MboII GAAGA 2 cut(s) 86, 230
MflI RGATCY 2 cut(s) 127, 656
MhlI GDGCHC 3 cut(s) 587, 653, 674
MlsI TGGCCA 1 cut(s) 483
MluCI AATT 1 cut(s) 732
MluNI TGGCCA 1 cut(s) 483
MlyI GAGTC 1 cut(s) 146
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 9 cut(s) 91, 199, 352, 358, 430, 487, 574, 671, 685
Mox20I TGGCCA 1 cut(s) 483
MscI TGGCCA 1 cut(s) 483
Msp20I TGGCCA 1 cut(s) 483
MspA1I CMGCKG 1 cut(s) 64
MspI CCGG 1 cut(s) 259
MspR9I CCNGG 6 cut(s) 134, 259, 377, 458, 485, 700
MvaI CCWGG 5 cut(s) 134, 377, 458, 485, 700
MvnI CGCG 3 cut(s) 676, 710, 712
NciI CCSGG 1 cut(s) 259
NcoI CCATGG 1 cut(s) 478
NdeI CATATG 1 cut(s) 756
NdeII GATC 2 cut(s) 127, 656
NlaIII CATG 4 cut(s) 98, 445, 482, 525
NlaIV GGNNCC 3 cut(s) 475, 476, 506
NruI TCGCGA 1 cut(s) 676
NsbI TGCGCA 1 cut(s) 630
NspI RCATGY 1 cut(s) 525
PaeR7I CTCGAG 1 cut(s) 578
PauI GCGCGC 1 cut(s) 710
PleI GAGTC 1 cut(s) 145
PpsI GAGTC 1 cut(s) 145
PpuMI RGGWCCY 1 cut(s) 474
Psp5II RGGWCCY 1 cut(s) 474
Psp6I CCWGG 5 cut(s) 132, 375, 456, 483, 698
PspEI GGTNACC 2 cut(s) 367, 460
PspGI CCWGG 5 cut(s) 132, 375, 456, 483, 698
PspN4I GGNNCC 3 cut(s) 475, 476, 506
PspPI GGNCC 3 cut(s) 66, 474, 505
PspPPI RGGWCCY 1 cut(s) 474
PstI CTGCAG 1 cut(s) 774
PsuI RGATCY 2 cut(s) 127, 656
PteI GCGCGC 1 cut(s) 710
RruI TCGCGA 1 cut(s) 676
RsaI GTAC 2 cut(s) 109, 256
RsaNI GTAC 2 cut(s) 108, 255
Sau3AI GATC 2 cut(s) 127, 656
Sau96I GGNCC 3 cut(s) 66, 474, 505
SchI GAGTC 1 cut(s) 146
ScrFI CCNGG 6 cut(s) 134, 259, 377, 458, 485, 700
SduI GDGCHC 3 cut(s) 587, 653, 674
SfaNI GCATC 4 cut(s) 73, 232, 283, 583
SfcI CTRYAG 1 cut(s) 770
Sfr274I CTCGAG 1 cut(s) 578
SinI GGWCC 2 cut(s) 474, 505
SlaI CTCGAG 1 cut(s) 578
SmlI CTYRAG 3 cut(s) 111, 578, 652
SmoI CTYRAG 3 cut(s) 111, 578, 652
Sse9I AATT 1 cut(s) 732
SsiI CCGC 2 cut(s) 64, 425
SspMI CTAG 2 cut(s) 290, 590
StyD4I CCNGG 6 cut(s) 132, 257, 375, 456, 483, 698
StyI CCWWGG 4 cut(s) 69, 87, 478, 717
TaaI ACNGT 4 cut(s) 43, 184, 346, 779
TaqI TCGA 3 cut(s) 81, 579, 606
TaqII GACCGA 1 cut(s) 419
TasI AATT 1 cut(s) 732
TscAI CASTG 1 cut(s) 349
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 1 cut(s) 349
VpaK11BI GGWCC 2 cut(s) 474, 505
XceI RCATGY 1 cut(s) 525
XcmI CCANNNNNNNNNTGG 3 cut(s) 187, 485, 754
XhoI CTCGAG 1 cut(s) 578
XspI CTAG 2 cut(s) 290, 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.