RchiOBHm_Chr4g0419581

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000075
Physical Location & Seq
Forward (+)
45049868 .. 45050906
1039 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38946

Sequence Viewer

Length: 984 bp
ATGGCGCGTGAGAATCGCGGTCGTGGTGGGCGAGAAGGTTCCTCTAGTGGAGGCGAGGGGATTCCCCGTGGTGGTGGTAGCAGGTCCTCTCACTGGGGTATCGCAGGGAGGTCCCGAGGGAGTAGCGAGGGTTCCTCTCGCGGGGCCTCAGCTAGGGTTGAGCGGCCCGTGGTGTCCGATGTTCCTGATACTGAGGAAGTGGAGGTATTGGAGATCCCGCGCACGCCTCGTGGGCGATTGCTTCTTGGTGAGACACCCATTGACCAGCCTGGCCCGAGTATGATGGAAGAGCAGATTGCCAAACTGAGGGCCACTTGGGCGATCCCTGAGAGTGTCTTGTTGCGTCTGTTGAGAGAAGGTGAAGTCTTTAGTCACCCCCCATTGGGGTGTGCAAGCTTTTATGAGTATCAACTCAGGTGTGGGTTGACGTTTCCATTACCCGAGGAATTGCAGTATCTACTGTCCTGTCTGAATATAGCGGTAGGGCAGCTATCCCCCAATGCGTTGAGGCAGATAATGGGTGTATTGCTGCTATGGAAGTTGAGCAAGTTGTTGTGTCCAAGTATCGGTGAGTTCAATTCCTTGTTCAAATTGTCGGACTCGACCAAAAGAGGCGATAGCGGGTGCGTGAATTTCAGGGTGTGCTGCTGCATCGTTATTAAGGAGTTGCCATCGAATATATATTCATGTTGGCGAGGATGGATGTGCCTAGTAGGTGGTCGGTGGCAAAATCCGGATATGGTGCATCGGGCTCCGAGCCGGTTCCAATCCATCTCCTTTTTGTGCGTCGTAGTGAGGCAGGAGGTGAAGTTGACCACGTTGGAGATGAAGCGTATGGCGAGGGTGATGGGTGCATTTCCGAGGGGGTTCTATCGTCTGTGTAGGCTGCCTATCTATGAGAGATTCGAGTTAGGGAGGTCTCCGGGTGAAGGATTTTCTTTTTGTTGTTGGTGTGTTGTATGTGTTGCAGGGTATCGCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

327

Amino Acids

36.44

Weight (kDa)

9.04

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 72
AccBSI CCGCTC 1 cut(s) 163
AccII CGCG 4 cut(s) 7, 18, 141, 220
AccIII TCCGGA 1 cut(s) 733
AciI CCGC 6 cut(s) 18, 141, 163, 218, 479, 621
AclWI GGATC 2 cut(s) 208, 316
AcsI RAATTY 1 cut(s) 631
AgsI TTSAA 2 cut(s) 577, 589
AjnI CCWGG 1 cut(s) 268
AluBI AGCT 3 cut(s) 152, 396, 490
AluI AGCT 3 cut(s) 152, 396, 490
Alw26I GTCTC 2 cut(s) 245, 924
AlwI GGATC 2 cut(s) 208, 316
Ama87I CYCGRG 3 cut(s) 114, 274, 440
Aor13HI TCCGGA 1 cut(s) 733
AoxI GGCC 4 cut(s) 144, 164, 271, 309
ApeKI GCWGC 5 cut(s) 487, 529, 645, 648, 886
ApoI RAATTY 1 cut(s) 631
AspLEI GCGC 2 cut(s) 7, 222
AspS9I GGNCC 6 cut(s) 84, 111, 144, 165, 272, 309
AsuC2I CCSGG 1 cut(s) 924
AsuHPI GGTGA 7 cut(s) 260, 365, 371, 581, 817, 856, 938
AvaI CYCGRG 3 cut(s) 114, 274, 440
AvaII GGWCC 2 cut(s) 84, 111
BaeI ACNNNNGTAYC 2 cut(s) 82, 115
BanII GRGCYC 1 cut(s) 754
BauI CACGAG 1 cut(s) 228
BbvCI CCTCAGC 1 cut(s) 148
BbvI GCAGC 5 cut(s) 499, 516, 632, 635, 873
BccI CCATC 5 cut(s) 277, 679, 693, 779, 841
BciT130I CCWGG 1 cut(s) 270
BcnI CCSGG 1 cut(s) 924
BcoDI GTCTC 2 cut(s) 245, 924
BfaI CTAG 3 cut(s) 45, 153, 710
BfuAI ACCTGC 1 cut(s) 72
BglI GCCNNNNNGGC 2 cut(s) 232, 317
BisI GCNGC 6 cut(s) 164, 488, 530, 646, 649, 887
BlsI GCNGC 6 cut(s) 165, 489, 531, 647, 650, 888
Bme1390I CCNGG 2 cut(s) 270, 924
Bme18I GGWCC 2 cut(s) 84, 111
BmeT110I CYCGRG 3 cut(s) 114, 274, 440
BmgT120I GGNCC 6 cut(s) 84, 111, 144, 165, 272, 309
BmiI GGNNCC 6 cut(s) 40, 113, 133, 145, 753, 764
BmrFI CCNGG 2 cut(s) 270, 924
BmrI ACTGGG 1 cut(s) 103
BmsI GCATC 2 cut(s) 660, 754
BmuI ACTGGG 1 cut(s) 103
BplI GAGNNNNNCTC 2 cut(s) 119, 151
Bpu10I CCTNAGC 1 cut(s) 148
BpuMI CCSGG 1 cut(s) 924
BsaI GGTCTC 1 cut(s) 924
BsaJI CCNNGG 5 cut(s) 67, 115, 168, 441, 860
BsaWI WCCGGW 1 cut(s) 733
BsaXI ACNNNNNCTCC 2 cut(s) 794, 824
Bse118I RCCGGY 1 cut(s) 759
Bse1I ACTGG 1 cut(s) 98
BseAI TCCGGA 1 cut(s) 733
BseBI CCWGG 1 cut(s) 270
BseDI CCNNGG 5 cut(s) 67, 115, 168, 441, 860
BseGI GGATG 2 cut(s) 704, 708
BseMII CTCAG 5 cut(s) 162, 183, 296, 318, 427
BseNI ACTGG 1 cut(s) 98
BseXI GCAGC 5 cut(s) 499, 516, 632, 635, 873
Bsh1236I CGCG 4 cut(s) 7, 18, 141, 220
Bsh1285I CGRYCG 1 cut(s) 22
BshFI GGCC 4 cut(s) 146, 166, 273, 311
BsiEI CGRYCG 1 cut(s) 22
BsiHKCI CYCGRG 3 cut(s) 114, 274, 440
BsiSI CCGG 3 cut(s) 734, 760, 923
BslFI GGGAC 1 cut(s) 97
BsmAI GTCTC 2 cut(s) 245, 924
BsmFI GGGAC 1 cut(s) 97
BsnI GGCC 4 cut(s) 146, 166, 273, 311
Bso31I GGTCTC 1 cut(s) 924
BsoBI CYCGRG 3 cut(s) 114, 274, 440
Bsp1286I GDGCHC 1 cut(s) 754
Bsp13I TCCGGA 1 cut(s) 733
Bsp143I GATC 2 cut(s) 213, 321
BspACI CCGC 6 cut(s) 18, 141, 163, 218, 479, 621
BspANI GGCC 4 cut(s) 146, 166, 273, 311
BspCNI CTCAG 5 cut(s) 161, 184, 297, 319, 426
BspEI TCCGGA 1 cut(s) 733
BspFNI CGCG 4 cut(s) 7, 18, 141, 220
BspLI GGNNCC 6 cut(s) 40, 113, 133, 145, 753, 764
BspMI ACCTGC 1 cut(s) 72
BspPI GGATC 2 cut(s) 208, 316
BspQI GCTCTTC 1 cut(s) 282
BspTNI GGTCTC 1 cut(s) 924
BsrBI CCGCTC 1 cut(s) 163
BsrFI RCCGGY 1 cut(s) 759
BsrI ACTGG 1 cut(s) 98
BssAI RCCGGY 1 cut(s) 759
BssECI CCNNGG 5 cut(s) 67, 115, 168, 441, 860
BssMI GATC 2 cut(s) 213, 321
BssSI CACGAG 1 cut(s) 228
Bst2BI CACGAG 1 cut(s) 228
Bst2UI CCWGG 1 cut(s) 270
Bst4CI ACNGT 1 cut(s) 462
Bst6I CTCTTC 1 cut(s) 282
BstC8I GCNNGC 2 cut(s) 224, 394
BstDEI CTNAG 5 cut(s) 148, 192, 305, 327, 413
BstDSI CCRYGG 2 cut(s) 67, 168
BstENI CCTNNNNNAGG 1 cut(s) 151
BstF5I GGATG 2 cut(s) 704, 708
BstFNI CGCG 4 cut(s) 7, 18, 141, 220
BstHHI GCGC 2 cut(s) 7, 222
BstKTI GATC 2 cut(s) 216, 324
BstMAI GTCTC 2 cut(s) 245, 924
BstMBI GATC 2 cut(s) 213, 321
BstMCI CGRYCG 1 cut(s) 22
BstMWI GCNNNNNNNGC 2 cut(s) 232, 317
BstNI CCWGG 1 cut(s) 270
BstSCI CCNGG 2 cut(s) 268, 922
BstUI CGCG 4 cut(s) 7, 18, 141, 220
BstV1I GCAGC 5 cut(s) 499, 516, 632, 635, 873
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
BsuRI GGCC 4 cut(s) 146, 166, 273, 311
BtgI CCRYGG 2 cut(s) 67, 168
BtsCI GGATG 2 cut(s) 704, 708
BtsIMutI CAGTG 1 cut(s) 91
BveI ACCTGC 1 cut(s) 72
Cac8I GCNNGC 2 cut(s) 224, 394
CfoI GCGC 2 cut(s) 7, 222
Cfr10I RCCGGY 1 cut(s) 759
Cfr13I GGNCC 6 cut(s) 84, 111, 144, 165, 272, 309
CseI GACGC 2 cut(s) 332, 775
CviAII CATG 1 cut(s) 687
DdeI CTNAG 5 cut(s) 148, 192, 305, 327, 413
DpnI GATC 2 cut(s) 215, 323
DpnII GATC 2 cut(s) 213, 321
Eam1104I CTCTTC 1 cut(s) 282
EarI CTCTTC 1 cut(s) 282
Eco24I GRGCYC 1 cut(s) 754
Eco31I GGTCTC 1 cut(s) 924
Eco47I GGWCC 2 cut(s) 84, 111
Eco88I CYCGRG 3 cut(s) 114, 274, 440
EcoNI CCTNNNNNAGG 1 cut(s) 151
EcoO109I RGGNCCY 3 cut(s) 84, 111, 144
EcoRII CCWGG 1 cut(s) 268
EcoT38I GRGCYC 1 cut(s) 754
FaeI CATG 1 cut(s) 690
FaqI GGGAC 1 cut(s) 97
FatI CATG 1 cut(s) 686
FauI CCCGC 3 cut(s) 134, 225, 614
Fnu4HI GCNGC 6 cut(s) 164, 488, 530, 646, 649, 887
FokI GGATG 2 cut(s) 711, 715
FriOI GRGCYC 1 cut(s) 754
Fsp4HI GCNGC 6 cut(s) 164, 488, 530, 646, 649, 887
FspBI CTAG 3 cut(s) 45, 153, 710
GlaI GCGC 2 cut(s) 6, 221
GluI GCNGC 6 cut(s) 164, 488, 530, 646, 649, 887
HaeIII GGCC 4 cut(s) 146, 166, 273, 311
HapII CCGG 3 cut(s) 734, 760, 923
HgaI GACGC 2 cut(s) 332, 775
HhaI GCGC 2 cut(s) 7, 222
Hin1II CATG 1 cut(s) 690
Hin6I GCGC 2 cut(s) 5, 220
HinP1I GCGC 2 cut(s) 5, 220
HincII GTYRAC 2 cut(s) 426, 813
HindII GTYRAC 2 cut(s) 426, 813
HindIII AAGCTT 1 cut(s) 394
HinfI GANTC 4 cut(s) 13, 61, 599, 903
HpaII CCGG 3 cut(s) 734, 760, 923
HphI GGTGA 7 cut(s) 260, 365, 371, 581, 817, 856, 938
Hpy166II GTNNAC 2 cut(s) 426, 813
Hpy188I TCNGA 5 cut(s) 178, 471, 598, 756, 861
Hpy188III TCNNGA 3 cut(s) 114, 185, 734
Hpy8I GTNNAC 2 cut(s) 426, 813
Hpy99I CGWCG 1 cut(s) 791
HpyAV CCTTC 3 cut(s) 29, 350, 923
HpyCH4III ACNGT 1 cut(s) 462
HpyCH4IV ACGT 2 cut(s) 428, 818
HpyCH4V TGCA 6 cut(s) 392, 451, 651, 745, 854, 968
HpyF10VI GCNNNNNNNGC 2 cut(s) 232, 317
HpyF3I CTNAG 5 cut(s) 148, 192, 305, 327, 413
HpySE526I ACGT 2 cut(s) 428, 818
Hsp92II CATG 1 cut(s) 690
HspAI GCGC 2 cut(s) 5, 220
Kpn2I TCCGGA 1 cut(s) 733
Kzo9I GATC 2 cut(s) 213, 321
LguI GCTCTTC 1 cut(s) 282
LmnI GCTCC 1 cut(s) 757
Lsp1109I GCAGC 5 cut(s) 499, 516, 632, 635, 873
LweI GCATC 2 cut(s) 660, 754
MaeI CTAG 3 cut(s) 45, 153, 710
MaeII ACGT 2 cut(s) 428, 818
MaeIII GTNAC 1 cut(s) 371
MalI GATC 2 cut(s) 215, 323
MbiI CCGCTC 1 cut(s) 163
MboI GATC 2 cut(s) 213, 321
MboII GAAGA 1 cut(s) 299
MflI RGATCY 1 cut(s) 213
MhlI GDGCHC 1 cut(s) 754
MluCI AATT 4 cut(s) 446, 577, 590, 631
MlyI GAGTC 1 cut(s) 593
MmeI TCCRAC 2 cut(s) 576, 801
MroI TCCGGA 1 cut(s) 733
MseI TTAA 1 cut(s) 660
MslI CAYNNNNRTG 1 cut(s) 385
MspI CCGG 3 cut(s) 734, 760, 923
MspR9I CCNGG 2 cut(s) 270, 924
MvaI CCWGG 1 cut(s) 270
MvnI CGCG 4 cut(s) 7, 18, 141, 220
MwoI GCNNNNNNNGC 2 cut(s) 232, 317
NciI CCSGG 1 cut(s) 924
NdeII GATC 2 cut(s) 213, 321
NlaIII CATG 1 cut(s) 690
NlaIV GGNNCC 6 cut(s) 40, 113, 133, 145, 753, 764
NmuCI GTSAC 1 cut(s) 371
PciSI GCTCTTC 1 cut(s) 282
PcsI WCGNNNNNNNCGW 1 cut(s) 28
PfeI GAWTC 3 cut(s) 13, 61, 903
PkrI GCNGC 6 cut(s) 165, 489, 531, 647, 650, 888
PleI GAGTC 1 cut(s) 593
PpsI GAGTC 1 cut(s) 593
PpuMI RGGWCCY 2 cut(s) 84, 111
Psp5II RGGWCCY 2 cut(s) 84, 111
Psp6I CCWGG 1 cut(s) 268
PspGI CCWGG 1 cut(s) 268
PspN4I GGNNCC 6 cut(s) 40, 113, 133, 145, 753, 764
PspPI GGNCC 6 cut(s) 84, 111, 144, 165, 272, 309
PspPPI RGGWCCY 2 cut(s) 84, 111
PsrI GAACNNNNNNTAC 2 cut(s) 115, 147
PsuI RGATCY 1 cut(s) 213
RseI CAYNNNNRTG 1 cut(s) 385
SapI GCTCTTC 1 cut(s) 282
SaqAI TTAA 1 cut(s) 660
SatI GCNGC 6 cut(s) 164, 488, 530, 646, 649, 887
Sau3AI GATC 2 cut(s) 213, 321
Sau96I GGNCC 6 cut(s) 84, 111, 144, 165, 272, 309
SchI GAGTC 1 cut(s) 593
ScrFI CCNGG 2 cut(s) 270, 924
SduI GDGCHC 1 cut(s) 754
SfaNI GCATC 2 cut(s) 660, 754
SinI GGWCC 2 cut(s) 84, 111
SmiMI CAYNNNNRTG 1 cut(s) 385
Sse9I AATT 4 cut(s) 446, 577, 590, 631
SsiI CCGC 6 cut(s) 18, 141, 163, 218, 479, 621
SspMI CTAG 3 cut(s) 45, 153, 710
StyD4I CCNGG 2 cut(s) 268, 922
TaaI ACNGT 1 cut(s) 462
TaiI ACGT 2 cut(s) 431, 821
TaqI TCGA 3 cut(s) 602, 674, 906
TasI AATT 4 cut(s) 446, 577, 590, 631
TauI GCSGC 1 cut(s) 166
TfiI GAWTC 3 cut(s) 13, 61, 903
Tru1I TTAA 1 cut(s) 660
Tru9I TTAA 1 cut(s) 660
TscAI CASTG 1 cut(s) 98
TseFI GTSAC 1 cut(s) 371
TseI GCWGC 5 cut(s) 487, 529, 645, 648, 886
Tsp45I GTSAC 1 cut(s) 371
TspDTI ATGAA 2 cut(s) 675, 842
TspRI CASTG 1 cut(s) 98
VpaK11BI GGWCC 2 cut(s) 84, 111
XagI CCTNNNNNAGG 1 cut(s) 151
XapI RAATTY 1 cut(s) 631
XspI CTAG 3 cut(s) 45, 153, 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.