Rmu_sc0005229.1_g000023

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005229.1
OG0000075
Physical Location & Seq
Reverse (-)
55412 .. 57181
1770 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005229.1_g000023.1.cds

Sequence Viewer

Length: 1182 bp
atgagttattgggatgtcattcgtgacgtgtcggttcctcattggctcggtgtcgtggcgctgtgggaccccctttcgggtcaccacattggtgatcctgtctcgcaggaagtcatcactgtggatagcagagaggcggaggtgaccagccaagccgttggcgagacaggtttgacagatgggtttacgagtgggggttcgcagggtactcgtgatgaggttgctgggggtctcgtacgtaccctgggcgagattggaattaccgatggtgccatccttcacatggttgctgacttgcgaaactgtcatggggatcgcggtcgtgtgagcattgaagacccgcggctagggtatcgggaagctcaggagaggttgatgagggctgtgaacctaaattaccatgcctcgggcgagttggtggctcattttgatagggagatagctcggctgcaaggggaggtggagtgcgaggatgtgaggcgggtaatcgatgaagggatcccgaggaggatggagctggaacgagcactcgctatagaggaggctcgtagtcaacaggccggggatgctatcgctccattgagggaggcgaacctctatttgactgggaagttgcaacgggcggaggatggcctgaggttgctggagcaagttacggctcgggtggctgaggccgaagagcatctgcaagatttggaaaggcaggttcgagaacgcgatgccgagttagagcttcgtaccgctgccttggagagtttggctccctatccggatcgcgtggtggatttggagggtgacttcgccgaagaatgcatccgcctgtacactgctgccgagacgcatcgggacaagctcaccaaggctaggcttgatggtgcggataaggcggtggatctctatctctggatggatcactttcaagagaaaattaacaaagccttctcggatggggtcttgcactcgattcgagatggtatcgctgctgggtggattgaccaggagaaaatggagcgggtattaggacaagctggtgatctcgaggtggagggtgttgttggtgagcaggaggccctcgcagaaatcgggggcgaggtacaaggcgagactgctggagagcaagatggagtggaggggcaagatcgggtaggggagcagacacatagtgccgagggcgagacctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

393

Amino Acids

43.33

Weight (kDa)

4.57

Isoelectric Point (pI)

37.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 694
AccB1I GGYRCC 1 cut(s) 269
AccBSI CCGCTC 1 cut(s) 1012
AccII CGCG 4 cut(s) 318, 343, 717, 777
AccIII TCCGGA 1 cut(s) 769
AclWI GGATC 7 cut(s) 89, 321, 493, 506, 780, 900, 918
AdeI CACNNNGTG 1 cut(s) 1163
AfaI GTAC 6 cut(s) 208, 237, 241, 739, 824, 1095
AfiI CCNNNNNNNGG 6 cut(s) 76, 77, 283, 347, 406, 864
AflIII ACRYGT 1 cut(s) 27
AgsI TTSAA 2 cut(s) 335, 920
AjiI CACGTC 1 cut(s) 28
AjnI CCWGG 2 cut(s) 243, 996
AleI CACNNNNGTG 1 cut(s) 90
AluBI AGCT 6 cut(s) 362, 443, 517, 733, 853, 1028
AluI AGCT 6 cut(s) 362, 443, 517, 733, 853, 1028
Alw21I GWGCWC 1 cut(s) 529
Alw26I GTCTC 6 cut(s) 106, 158, 236, 830, 1097, 1169
AlwI GGATC 7 cut(s) 89, 321, 493, 506, 780, 900, 918
Ama87I CYCGRG 4 cut(s) 406, 502, 660, 1037
Aor13HI TCCGGA 1 cut(s) 769
AoxI GGCC 4 cut(s) 558, 631, 672, 1068
ApeKI GCWGC 4 cut(s) 448, 743, 830, 980
AspLEI GCGC 1 cut(s) 61
AspS9I GGNCC 2 cut(s) 67, 1069
AsuC2I CCSGG 1 cut(s) 562
AsuHPI GGTGA 7 cut(s) 74, 104, 154, 806, 847, 1043, 1070
AvaI CYCGRG 4 cut(s) 406, 502, 660, 1037
AvaII GGWCC 1 cut(s) 67
AxyI CCTNAGG 1 cut(s) 635
BamHI GGATCC 1 cut(s) 498
BanI GGYRCC 1 cut(s) 269
BauI CACGAG 1 cut(s) 210
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 1 cut(s) 529
BbvCI CCTCAGC 1 cut(s) 669
BbvI GCAGC 4 cut(s) 435, 730, 817, 967
BceAI ACGGC 2 cut(s) 140, 672
BcgI CGANNNNNNTGC 4 cut(s) 191, 225, 947, 981
BciT130I CCWGG 2 cut(s) 245, 998
BcnI CCSGG 1 cut(s) 562
BcoDI GTCTC 6 cut(s) 106, 158, 236, 830, 1097, 1169
BfaI CTAG 3 cut(s) 347, 864, 1180
BfmI CTRYAG 1 cut(s) 534
BfoI RGCGCY 1 cut(s) 62
BfuAI ACCTGC 1 cut(s) 694
BisI GCNGC 5 cut(s) 344, 449, 744, 831, 981
BlsI GCNGC 5 cut(s) 345, 450, 745, 832, 982
Bme1390I CCNGG 3 cut(s) 245, 562, 998
Bme18I GGWCC 1 cut(s) 67
BmeT110I CYCGRG 4 cut(s) 406, 502, 660, 1037
BmgBI CACGTC 1 cut(s) 28
BmgT120I GGNCC 2 cut(s) 67, 1069
BmiI GGNNCC 6 cut(s) 36, 68, 69, 271, 500, 762
BmrFI CCNGG 3 cut(s) 245, 562, 998
BmrI ACTGGG 1 cut(s) 615
BmsI GCATC 5 cut(s) 556, 691, 709, 822, 850
BmuI ACTGGG 1 cut(s) 615
BpiI GAAGAC 1 cut(s) 342
BplI GAGNNNNNCTC 2 cut(s) 745, 777
BpmI CTGGAG 2 cut(s) 665, 1131
Bpu10I CCTNAGC 2 cut(s) 363, 669
BpuMI CCSGG 1 cut(s) 562
Bsa29I ATCGAT 1 cut(s) 489
BsaAI YACGTR 1 cut(s) 239
BsaBI GATNNNNATC 1 cut(s) 897
BsaI GGTCTC 2 cut(s) 236, 1169
BsaJI CCNNGG 9 cut(s) 243, 244, 341, 405, 503, 561, 747, 858, 1167
BsaWI WCCGGW 1 cut(s) 769
BsaXI ACNNNNNCTCC 2 cut(s) 449, 479
Bsc4I CCNNNNNNNGG 6 cut(s) 76, 77, 283, 347, 406, 864
Bse1I ACTGG 1 cut(s) 610
Bse21I CCTNAGG 1 cut(s) 635
Bse8I GATNNNNATC 1 cut(s) 897
BseAI TCCGGA 1 cut(s) 769
BseBI CCWGG 2 cut(s) 245, 998
BseCI ATCGAT 1 cut(s) 489
BseDI CCNNGG 9 cut(s) 243, 244, 341, 405, 503, 561, 747, 858, 1167
BseGI GGATG 9 cut(s) 19, 273, 478, 516, 571, 634, 813, 912, 952
BseJI GATNNNNATC 1 cut(s) 897
BseLI CCNNNNNNNGG 6 cut(s) 76, 77, 283, 347, 406, 864
BseMII CTCAG 3 cut(s) 377, 626, 660
BseNI ACTGG 1 cut(s) 610
BseRI GAGGAG 2 cut(s) 520, 554
BseXI GCAGC 4 cut(s) 435, 730, 817, 967
BseYI CCCAGC 2 cut(s) 224, 983
Bsh1236I CGCG 4 cut(s) 318, 343, 717, 777
Bsh1285I CGRYCG 1 cut(s) 322
BshFI GGCC 4 cut(s) 560, 633, 674, 1070
BshNI GGYRCC 1 cut(s) 269
BshVI ATCGAT 1 cut(s) 489
BsiEI CGRYCG 1 cut(s) 322
BsiHKAI GWGCWC 1 cut(s) 529
BsiHKCI CYCGRG 4 cut(s) 406, 502, 660, 1037
BsiSI CCGG 2 cut(s) 561, 770
BsiWI CGTACG 1 cut(s) 235
BslFI GGGAC 2 cut(s) 80, 860
BslI CCNNNNNNNGG 6 cut(s) 76, 77, 283, 347, 406, 864
BsmAI GTCTC 6 cut(s) 106, 158, 236, 830, 1097, 1169
BsmBI CGTCTC 1 cut(s) 830
BsmFI GGGAC 2 cut(s) 80, 860
BsmI GAATGC 1 cut(s) 815
BsnI GGCC 4 cut(s) 560, 633, 674, 1070
Bso31I GGTCTC 2 cut(s) 236, 1169
BsoBI CYCGRG 4 cut(s) 406, 502, 660, 1037
Bsp1286I GDGCHC 1 cut(s) 529
Bsp13I TCCGGA 1 cut(s) 769
Bsp1407I TGTACA 1 cut(s) 822
Bsp143I GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
BspANI GGCC 4 cut(s) 560, 633, 674, 1070
BspCNI CTCAG 3 cut(s) 376, 627, 661
BspDI ATCGAT 1 cut(s) 489
BspEI TCCGGA 1 cut(s) 769
BspFNI CGCG 4 cut(s) 318, 343, 717, 777
BspLI GGNNCC 6 cut(s) 36, 68, 69, 271, 500, 762
BspMI ACCTGC 1 cut(s) 694
BspPI GGATC 7 cut(s) 89, 321, 493, 506, 780, 900, 918
BspQI GCTCTTC 1 cut(s) 672
BspT107I GGYRCC 1 cut(s) 269
BspTNI GGTCTC 2 cut(s) 236, 1169
BsrBI CCGCTC 1 cut(s) 1012
BsrGI TGTACA 1 cut(s) 822
BsrI ACTGG 1 cut(s) 610
BssECI CCNNGG 9 cut(s) 243, 244, 341, 405, 503, 561, 747, 858, 1167
BssMI GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
BssSI CACGAG 1 cut(s) 210
BssT1I CCWWGG 2 cut(s) 747, 858
Bst2BI CACGAG 1 cut(s) 210
Bst2UI CCWGG 2 cut(s) 245, 998
Bst4CI ACNGT 2 cut(s) 121, 305
Bst6I CTCTTC 1 cut(s) 672
BstAUI TGTACA 1 cut(s) 822
BstBAI YACGTR 1 cut(s) 239
BstDEI CTNAG 3 cut(s) 363, 635, 669
BstDSI CCRYGG 1 cut(s) 341
BstEII GGTNACC 2 cut(s) 80, 142
BstF5I GGATG 9 cut(s) 19, 273, 478, 516, 571, 634, 813, 912, 952
BstFNI CGCG 4 cut(s) 318, 343, 717, 777
BstH2I RGCGCY 1 cut(s) 62
BstHHI GCGC 1 cut(s) 61
BstKTI GATC 8 cut(s) 97, 316, 501, 775, 895, 913, 1036, 1141
BstMAI GTCTC 6 cut(s) 106, 158, 236, 830, 1097, 1169
BstMBI GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
BstMCI CGRYCG 1 cut(s) 322
BstMWI GCNNNNNNNGC 3 cut(s) 566, 665, 884
BstNI CCWGG 2 cut(s) 245, 998
BstPI GGTNACC 2 cut(s) 80, 142
BstSCI CCNGG 3 cut(s) 243, 560, 996
BstSFI CTRYAG 1 cut(s) 534
BstSNI TACGTA 1 cut(s) 239
BstUI CGCG 4 cut(s) 318, 343, 717, 777
BstV1I GCAGC 4 cut(s) 435, 730, 817, 967
BstV2I GAAGAC 1 cut(s) 342
BstX2I RGATCY 2 cut(s) 498, 892
BstXI CCANNNNNNTGG 1 cut(s) 158
BstYI RGATCY 2 cut(s) 498, 892
Bsu15I ATCGAT 1 cut(s) 489
Bsu36I CCTNAGG 1 cut(s) 635
BsuRI GGCC 4 cut(s) 560, 633, 674, 1070
BsuTUI ATCGAT 1 cut(s) 489
BtgI CCRYGG 1 cut(s) 341
BtgZI GCGATG 1 cut(s) 732
BtrI CACGTC 1 cut(s) 28
BtsCI GGATG 9 cut(s) 19, 273, 478, 516, 571, 634, 813, 912, 952
BtsI GCAGTG 1 cut(s) 825
BtsIMutI CAGTG 2 cut(s) 117, 825
BveI ACCTGC 1 cut(s) 694
CfoI GCGC 1 cut(s) 61
Cfr13I GGNCC 2 cut(s) 67, 1069
Cfr42I CCGCGG 1 cut(s) 344
ClaI ATCGAT 1 cut(s) 489
CseI GACGC 1 cut(s) 847
Csp6I GTAC 6 cut(s) 207, 236, 240, 738, 823, 1094
CviAII CATG 3 cut(s) 283, 308, 401
CviQI GTAC 6 cut(s) 207, 236, 240, 738, 823, 1094
DdeI CTNAG 3 cut(s) 363, 635, 669
DpnI GATC 8 cut(s) 96, 315, 500, 774, 894, 912, 1035, 1140
DpnII GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
DraIII CACNNNGTG 1 cut(s) 1163
Eam1104I CTCTTC 1 cut(s) 672
EarI CTCTTC 1 cut(s) 672
EciI GGCGGA 3 cut(s) 152, 638, 806
Eco105I TACGTA 1 cut(s) 239
Eco130I CCWWGG 2 cut(s) 747, 858
Eco31I GGTCTC 2 cut(s) 236, 1169
Eco47I GGWCC 1 cut(s) 67
Eco81I CCTNAGG 1 cut(s) 635
Eco88I CYCGRG 4 cut(s) 406, 502, 660, 1037
Eco91I GGTNACC 2 cut(s) 80, 142
EcoO109I RGGNCCY 2 cut(s) 67, 1069
EcoO65I GGTNACC 2 cut(s) 80, 142
EcoRII CCWGG 2 cut(s) 243, 996
EcoT14I CCWWGG 2 cut(s) 747, 858
EcoT22I ATGCAT 1 cut(s) 815
ErhI CCWWGG 2 cut(s) 747, 858
Esp3I CGTCTC 1 cut(s) 830
FaeI CATG 3 cut(s) 286, 311, 404
FaiI YATR 5 cut(s) 284, 309, 402, 536, 1161
FaqI GGGAC 2 cut(s) 80, 860
FatI CATG 3 cut(s) 282, 307, 400
FauI CCCGC 3 cut(s) 348, 474, 1005
Fnu4HI GCNGC 5 cut(s) 344, 449, 744, 831, 981
FokI GGATG 9 cut(s) 26, 260, 485, 523, 578, 641, 800, 919, 959
Fsp4HI GCNGC 5 cut(s) 344, 449, 744, 831, 981
FspBI CTAG 3 cut(s) 347, 864, 1180
GlaI GCGC 1 cut(s) 60
GluI GCNGC 5 cut(s) 344, 449, 744, 831, 981
GsaI CCCAGC 2 cut(s) 228, 987
GsuI CTGGAG 2 cut(s) 665, 1131
HaeII RGCGCY 1 cut(s) 62
HaeIII GGCC 4 cut(s) 560, 633, 674, 1070
HapII CCGG 2 cut(s) 561, 770
HgaI GACGC 1 cut(s) 847
HhaI GCGC 1 cut(s) 61
Hin1II CATG 3 cut(s) 286, 311, 404
Hin6I GCGC 1 cut(s) 59
HinP1I GCGC 1 cut(s) 59
HincII GTYRAC 1 cut(s) 554
HindII GTYRAC 1 cut(s) 554
HinfI GANTC 1 cut(s) 964
HpaII CCGG 2 cut(s) 561, 770
HphI GGTGA 7 cut(s) 74, 104, 154, 806, 847, 1043, 1070
Hpy166II GTNNAC 4 cut(s) 186, 388, 554, 825
Hpy188I TCNGA 1 cut(s) 946
Hpy8I GTNNAC 4 cut(s) 186, 388, 554, 825
HpyAV CCTTC 3 cut(s) 287, 488, 949
HpyCH4III ACNGT 2 cut(s) 121, 305
HpyCH4IV ACGT 2 cut(s) 27, 238
HpyCH4V TGCA 5 cut(s) 451, 616, 688, 813, 958
HpyF10VI GCNNNNNNNGC 3 cut(s) 566, 665, 884
HpyF3I CTNAG 3 cut(s) 363, 635, 669
HpySE526I ACGT 2 cut(s) 27, 238
Hsp92II CATG 3 cut(s) 286, 311, 404
HspAI GCGC 1 cut(s) 59
KflI GGGWCCC 1 cut(s) 67
Kpn2I TCCGGA 1 cut(s) 769
KspI CCGCGG 1 cut(s) 344
Kzo9I GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 6 cut(s) 514, 580, 646, 766, 1009, 1150
Lsp1109I GCAGC 4 cut(s) 435, 730, 817, 967
LweI GCATC 5 cut(s) 556, 691, 709, 822, 850
MaeI CTAG 3 cut(s) 347, 864, 1180
MaeII ACGT 2 cut(s) 27, 238
MaeIII GTNAC 5 cut(s) 23, 80, 142, 652, 794
MalI GATC 8 cut(s) 96, 315, 500, 774, 894, 912, 1035, 1140
MbiI CCGCTC 1 cut(s) 1012
MboI GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
MboII GAAGA 3 cut(s) 347, 689, 818
MflI RGATCY 2 cut(s) 498, 892
MhlI GDGCHC 1 cut(s) 529
MluCI AATT 3 cut(s) 258, 394, 927
Mph1103I ATGCAT 1 cut(s) 815
MroI TCCGGA 1 cut(s) 769
MseI TTAA 1 cut(s) 930
MslI CAYNNNNRTG 2 cut(s) 90, 119
MspA1I CMGCKG 2 cut(s) 343, 743
MspI CCGG 2 cut(s) 561, 770
MspR9I CCNGG 3 cut(s) 245, 562, 998
Mva1269I GAATGC 1 cut(s) 815
MvaI CCWGG 2 cut(s) 245, 998
MvnI CGCG 4 cut(s) 318, 343, 717, 777
MwoI GCNNNNNNNGC 3 cut(s) 566, 665, 884
NciI CCSGG 1 cut(s) 562
NdeII GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
NlaIII CATG 3 cut(s) 286, 311, 404
NlaIV GGNNCC 6 cut(s) 36, 68, 69, 271, 500, 762
NmeAIII GCCGAG 3 cut(s) 424, 748, 859
NmuCI GTSAC 4 cut(s) 23, 80, 142, 794
NsiI ATGCAT 1 cut(s) 815
OliI CACNNNNGTG 1 cut(s) 90
PaeR7I CTCGAG 1 cut(s) 1037
PasI CCCWGGG 1 cut(s) 244
PciSI GCTCTTC 1 cut(s) 672
PctI GAATGC 1 cut(s) 815
PfeI GAWTC 1 cut(s) 964
Pfl23II CGTACG 1 cut(s) 235
PkrI GCNGC 5 cut(s) 345, 450, 745, 832, 982
Ppu21I YACGTR 1 cut(s) 239
PpuMI RGGWCCY 1 cut(s) 67
Psp5II RGGWCCY 1 cut(s) 67
Psp6I CCWGG 2 cut(s) 243, 996
PspEI GGTNACC 2 cut(s) 80, 142
PspFI CCCAGC 2 cut(s) 224, 983
PspGI CCWGG 2 cut(s) 243, 996
PspLI CGTACG 1 cut(s) 235
PspN4I GGNNCC 6 cut(s) 36, 68, 69, 271, 500, 762
PspPI GGNCC 2 cut(s) 67, 1069
PspPPI RGGWCCY 1 cut(s) 67
PsrI GAACNNNNNNTAC 2 cut(s) 380, 412
PsuI RGATCY 2 cut(s) 498, 892
RsaI GTAC 6 cut(s) 208, 237, 241, 739, 824, 1095
RsaNI GTAC 6 cut(s) 207, 236, 240, 738, 823, 1094
RseI CAYNNNNRTG 2 cut(s) 90, 119
SacII CCGCGG 1 cut(s) 344
SapI GCTCTTC 1 cut(s) 672
SaqAI TTAA 1 cut(s) 930
SatI GCNGC 5 cut(s) 344, 449, 744, 831, 981
Sau3AI GATC 8 cut(s) 94, 313, 498, 772, 892, 910, 1033, 1138
Sau96I GGNCC 2 cut(s) 67, 1069
ScrFI CCNGG 3 cut(s) 245, 562, 998
SduI GDGCHC 1 cut(s) 529
SfaNI GCATC 5 cut(s) 556, 691, 709, 822, 850
SfcI CTRYAG 1 cut(s) 534
Sfr274I CTCGAG 1 cut(s) 1037
Sfr303I CCGCGG 1 cut(s) 344
SgrBI CCGCGG 1 cut(s) 344
SinI GGWCC 1 cut(s) 67
SlaI CTCGAG 1 cut(s) 1037
SmiMI CAYNNNNRTG 2 cut(s) 90, 119
SmlI CTYRAG 1 cut(s) 1037
SmoI CTYRAG 1 cut(s) 1037
SnaBI TACGTA 1 cut(s) 239
Sse9I AATT 3 cut(s) 258, 394, 927
SspMI CTAG 3 cut(s) 347, 864, 1180
StyD4I CCNGG 3 cut(s) 243, 560, 996
StyI CCWWGG 2 cut(s) 747, 858
TaaI ACNGT 2 cut(s) 121, 305
TaiI ACGT 2 cut(s) 30, 241
TaqI TCGA 5 cut(s) 489, 709, 962, 967, 1038
TasI AATT 3 cut(s) 258, 394, 927
TatI WGTACW 1 cut(s) 822
TauI GCSGC 1 cut(s) 346
TfiI GAWTC 1 cut(s) 964
Tru1I TTAA 1 cut(s) 930
Tru9I TTAA 1 cut(s) 930
TscAI CASTG 2 cut(s) 124, 832
TseFI GTSAC 4 cut(s) 23, 80, 142, 794
TseI GCWGC 4 cut(s) 448, 743, 830, 980
Tsp45I GTSAC 4 cut(s) 23, 80, 142, 794
TspDTI ATGAA 1 cut(s) 507
TspRI CASTG 2 cut(s) 124, 832
VpaK11BI GGWCC 1 cut(s) 67
XcmI CCANNNNNNNNNTGG 1 cut(s) 280
XhoI CTCGAG 1 cut(s) 1037
XspI CTAG 3 cut(s) 347, 864, 1180
Zsp2I ATGCAT 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.