Rroxscaffold_2G00110620

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000075
Physical Location & Seq
Reverse (-)
35004001 .. 35004678
678 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00110620.1

Sequence Viewer

Length: 549 bp
ATGAGCAAGTCCCGCCGGGTCTCTACGGAGGGGAGGATCTTAGTAACGTGGCTCGGGCCTCGGAGCCCATGGTTGAAGTGGAGATTTCCGTTGAGGAGTTGCGGAAGAGGTGGAGCAGCGTCAAAGCGATACCGGCGTCCTTGCTCGGCGGTGCAAGACTCAATGTTGGAACAGCTAGATGCGTCTTTGGCCCGGGATATTAGCCCTCCAATCTCGCGAGAGACGAGGGCCCATGCCCGGGATGGTGAAGGAGATGGTCCGCGTGTTAGACACGTGCGCCGGAAGGATGGGGTAGGATCGAAGAAGAGGATCGCCTCGCGGCTACCTCTCGGGAGTCCCCCCGTCCGGGTTGGGATCGATACTCGTGGTAGCAAGAGGTCTTGGGTTGATAATGTATCGTGCTTGAGATCTACAAGTGGGGGCTCACTAGGTTCCGCGATGAGGTTGCGGGGTCTCGCGTGCACCCCGGGTGAGATTGGAATTACCGATGGCGCCATTCTTCAAACGGTTGCCGACCGTCGAACTATTGTCGCGACTGCAGTTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

182

Amino Acids

19.73

Weight (kDa)

11.54

Isoelectric Point (pI)

67.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 491
AccII CGCG 6 cut(s) 217, 262, 319, 437, 458, 533
AciI CCGC 7 cut(s) 13, 102, 149, 260, 319, 435, 448
AclWI GGATC 4 cut(s) 44, 304, 317, 362
AcvI CACGTG 1 cut(s) 274
AcyI GRCGYC 2 cut(s) 136, 492
AfiI CCNNNNNNNGG 5 cut(s) 237, 238, 345, 346, 441
AflIII ACRYGT 1 cut(s) 271
AgsI TTSAA 2 cut(s) 76, 503
AluBI AGCT 1 cut(s) 175
AluI AGCT 1 cut(s) 175
Alw21I GWGCWC 1 cut(s) 464
Alw26I GTCTC 3 cut(s) 25, 215, 458
Alw44I GTGCAC 1 cut(s) 460
AlwI GGATC 4 cut(s) 44, 304, 317, 362
Ama87I CYCGRG 5 cut(s) 53, 192, 237, 329, 466
AoxI GGCC 3 cut(s) 56, 189, 228
ApaI GGGCCC 1 cut(s) 232
ApaLI GTGCAC 1 cut(s) 460
ApeKI GCWGC 1 cut(s) 116
AspLEI GCGC 2 cut(s) 279, 494
AspS9I GGNCC 5 cut(s) 56, 190, 228, 229, 257
AsuC2I CCSGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
AsuHPI GGTGA 2 cut(s) 257, 482
AvaI CYCGRG 5 cut(s) 53, 192, 237, 329, 466
AvaII GGWCC 1 cut(s) 257
BaeGI GKGCMC 2 cut(s) 232, 464
BaeI ACNNNNGTAYC 2 cut(s) 121, 154
BanI GGYRCC 1 cut(s) 491
BanII GRGCYC 3 cut(s) 68, 232, 425
BauI CACGAG 1 cut(s) 363
BbrPI CACGTG 1 cut(s) 274
Bbv12I GWGCWC 1 cut(s) 464
BbvI GCAGC 1 cut(s) 128
BccI CCATC 4 cut(s) 236, 248, 281, 482
BcgI CGANNNNNNTGC 2 cut(s) 427, 461
BcnI CCSGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
BcoDI GTCTC 3 cut(s) 25, 215, 458
BfaI CTAG 2 cut(s) 176, 428
BfmI CTRYAG 1 cut(s) 537
BfoI RGCGCY 1 cut(s) 495
BglII AGATCT 1 cut(s) 407
BisI GCNGC 2 cut(s) 117, 320
BlsI GCNGC 2 cut(s) 118, 321
Bme1390I CCNGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
Bme18I GGWCC 1 cut(s) 257
BmeT110I CYCGRG 5 cut(s) 53, 192, 237, 329, 466
BmgT120I GGNCC 5 cut(s) 56, 190, 228, 229, 257
BmiI GGNNCC 4 cut(s) 65, 230, 433, 493
BmrFI CCNGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
BmsI GCATC 1 cut(s) 169
BpuEI CTTGAG 1 cut(s) 424
BpuMI CCSGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
Bsa29I ATCGAT 1 cut(s) 357
BsaAI YACGTR 1 cut(s) 274
BsaHI GRCGYC 2 cut(s) 136, 492
BsaI GGTCTC 2 cut(s) 25, 458
BsaJI CCNNGG 6 cut(s) 59, 68, 192, 237, 465, 466
Bsc4I CCNNNNNNNGG 5 cut(s) 237, 238, 345, 346, 441
Bse118I RCCGGY 1 cut(s) 132
BseCI ATCGAT 1 cut(s) 357
BseDI CCNNGG 6 cut(s) 59, 68, 192, 237, 465, 466
BseGI GGATG 2 cut(s) 247, 292
BseLI CCNNNNNNNGG 5 cut(s) 237, 238, 345, 346, 441
BseRI GAGGAG 1 cut(s) 109
BseSI GKGCMC 2 cut(s) 232, 464
BseXI GCAGC 1 cut(s) 128
Bsh1236I CGCG 6 cut(s) 217, 262, 319, 437, 458, 533
Bsh1285I CGRYCG 1 cut(s) 517
BshFI GGCC 3 cut(s) 58, 191, 230
BshNI GGYRCC 1 cut(s) 491
BshVI ATCGAT 1 cut(s) 357
BsiEI CGRYCG 1 cut(s) 517
BsiHKAI GWGCWC 1 cut(s) 464
BsiHKCI CYCGRG 5 cut(s) 53, 192, 237, 329, 466
BsiSI CCGG 7 cut(s) 16, 133, 193, 238, 280, 346, 467
BslFI GGGAC 1 cut(s) 321
BslI CCNNNNNNNGG 5 cut(s) 237, 238, 345, 346, 441
BsmAI GTCTC 3 cut(s) 25, 215, 458
BsmBI CGTCTC 1 cut(s) 215
BsmFI GGGAC 1 cut(s) 321
BsnI GGCC 3 cut(s) 58, 191, 230
Bso31I GGTCTC 2 cut(s) 25, 458
BsoBI CYCGRG 5 cut(s) 53, 192, 237, 329, 466
Bsp120I GGGCCC 1 cut(s) 228
Bsp1286I GDGCHC 4 cut(s) 68, 232, 425, 464
Bsp143I GATC 5 cut(s) 36, 296, 309, 354, 407
Bsp19I CCATGG 1 cut(s) 68
Bsp68I TCGCGA 2 cut(s) 217, 533
BspACI CCGC 7 cut(s) 13, 102, 149, 260, 319, 435, 448
BspANI GGCC 3 cut(s) 58, 191, 230
BspDI ATCGAT 1 cut(s) 357
BspFNI CGCG 6 cut(s) 217, 262, 319, 437, 458, 533
BspLI GGNNCC 4 cut(s) 65, 230, 433, 493
BspMAI CTGCAG 1 cut(s) 541
BspPI GGATC 4 cut(s) 44, 304, 317, 362
BspT107I GGYRCC 1 cut(s) 491
BspTNI GGTCTC 2 cut(s) 25, 458
BsrFI RCCGGY 1 cut(s) 132
BssAI RCCGGY 1 cut(s) 132
BssECI CCNNGG 6 cut(s) 59, 68, 192, 237, 465, 466
BssMI GATC 5 cut(s) 36, 296, 309, 354, 407
BssNI GRCGYC 2 cut(s) 136, 492
BssSI CACGAG 1 cut(s) 363
BssT1I CCWWGG 1 cut(s) 68
Bst2BI CACGAG 1 cut(s) 363
Bst4CI ACNGT 2 cut(s) 508, 518
Bst6I CTCTTC 2 cut(s) 100, 299
BstACI GRCGYC 2 cut(s) 136, 492
BstBAI YACGTR 1 cut(s) 274
BstC8I GCNNGC 1 cut(s) 460
BstDEI CTNAG 1 cut(s) 40
BstDSI CCRYGG 1 cut(s) 68
BstF5I GGATG 2 cut(s) 247, 292
BstFNI CGCG 6 cut(s) 217, 262, 319, 437, 458, 533
BstH2I RGCGCY 1 cut(s) 495
BstHHI GCGC 2 cut(s) 279, 494
BstKTI GATC 5 cut(s) 39, 299, 312, 357, 410
BstMAI GTCTC 3 cut(s) 25, 215, 458
BstMBI GATC 5 cut(s) 36, 296, 309, 354, 407
BstMCI CGRYCG 1 cut(s) 517
BstMWI GCNNNNNNNGC 3 cut(s) 12, 133, 188
BstSCI CCNGG 8 cut(s) 15, 191, 192, 236, 237, 345, 465, 466
BstSFI CTRYAG 1 cut(s) 537
BstSLI GKGCMC 2 cut(s) 232, 464
BstUI CGCG 6 cut(s) 217, 262, 319, 437, 458, 533
BstV1I GCAGC 1 cut(s) 128
BstX2I RGATCY 2 cut(s) 36, 407
BstYI RGATCY 2 cut(s) 36, 407
Bsu15I ATCGAT 1 cut(s) 357
BsuRI GGCC 3 cut(s) 58, 191, 230
BsuTUI ATCGAT 1 cut(s) 357
BtgI CCRYGG 1 cut(s) 68
BtgZI GCGATG 1 cut(s) 452
BtsCI GGATG 2 cut(s) 247, 292
BtuMI TCGCGA 2 cut(s) 217, 533
Cac8I GCNNGC 1 cut(s) 460
CfoI GCGC 2 cut(s) 279, 494
Cfr10I RCCGGY 1 cut(s) 132
Cfr13I GGNCC 5 cut(s) 56, 190, 228, 229, 257
Cfr9I CCCGGG 3 cut(s) 192, 237, 466
ClaI ATCGAT 1 cut(s) 357
CseI GACGC 3 cut(s) 108, 125, 171
CviAII CATG 2 cut(s) 69, 233
CviJI RGCY 9 cut(s) 52, 58, 66, 175, 191, 204, 230, 322, 423
CviKI_1 RGCY 9 cut(s) 52, 58, 66, 175, 191, 204, 230, 322, 423
DdeI CTNAG 1 cut(s) 40
DinI GGCGCC 1 cut(s) 493
DpnI GATC 5 cut(s) 38, 298, 311, 356, 409
DpnII GATC 5 cut(s) 36, 296, 309, 354, 407
Eam1104I CTCTTC 2 cut(s) 100, 299
EarI CTCTTC 2 cut(s) 100, 299
Eco130I CCWWGG 1 cut(s) 68
Eco24I GRGCYC 3 cut(s) 68, 232, 425
Eco31I GGTCTC 2 cut(s) 25, 458
Eco47I GGWCC 1 cut(s) 257
Eco72I CACGTG 1 cut(s) 274
Eco88I CYCGRG 5 cut(s) 53, 192, 237, 329, 466
EcoO109I RGGNCCY 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 68
EcoT38I GRGCYC 3 cut(s) 68, 232, 425
EgeI GGCGCC 1 cut(s) 493
EheI GGCGCC 1 cut(s) 493
ErhI CCWWGG 1 cut(s) 68
Esp3I CGTCTC 1 cut(s) 215
FaeI CATG 2 cut(s) 72, 236
FaiI YATR 2 cut(s) 70, 234
FaqI GGGAC 1 cut(s) 321
FatI CATG 2 cut(s) 68, 232
FauI CCCGC 2 cut(s) 20, 441
Fnu4HI GCNGC 2 cut(s) 117, 320
FokI GGATG 2 cut(s) 254, 299
FriOI GRGCYC 3 cut(s) 68, 232, 425
Fsp4HI GCNGC 2 cut(s) 117, 320
FspBI CTAG 2 cut(s) 176, 428
GlaI GCGC 2 cut(s) 278, 493
GluI GCNGC 2 cut(s) 117, 320
HaeII RGCGCY 1 cut(s) 495
HaeIII GGCC 3 cut(s) 58, 191, 230
HapII CCGG 7 cut(s) 16, 133, 193, 238, 280, 346, 467
HgaI GACGC 3 cut(s) 108, 125, 171
HhaI GCGC 2 cut(s) 279, 494
Hin1I GRCGYC 2 cut(s) 136, 492
Hin1II CATG 2 cut(s) 72, 236
Hin6I GCGC 2 cut(s) 277, 492
HinP1I GCGC 2 cut(s) 277, 492
HinfI GANTC 2 cut(s) 158, 334
HpaII CCGG 7 cut(s) 16, 133, 193, 238, 280, 346, 467
HphI GGTGA 2 cut(s) 257, 482
Hpy166II GTNNAC 1 cut(s) 462
Hpy188I TCNGA 1 cut(s) 63
Hpy188III TCNNGA 3 cut(s) 216, 331, 532
Hpy8I GTNNAC 1 cut(s) 462
Hpy99I CGWCG 1 cut(s) 522
HpyAV CCTTC 2 cut(s) 242, 277
HpyCH4III ACNGT 2 cut(s) 508, 518
HpyCH4IV ACGT 2 cut(s) 47, 273
HpyCH4V TGCA 3 cut(s) 154, 462, 539
HpyF10VI GCNNNNNNNGC 3 cut(s) 12, 133, 188
HpyF3I CTNAG 1 cut(s) 40
HpySE526I ACGT 2 cut(s) 47, 273
Hsp92I GRCGYC 2 cut(s) 136, 492
Hsp92II CATG 2 cut(s) 72, 236
HspAI GCGC 2 cut(s) 277, 492
KasI GGCGCC 1 cut(s) 491
Kzo9I GATC 5 cut(s) 36, 296, 309, 354, 407
LmnI GCTCC 2 cut(s) 63, 113
LpnPI CCDG 7 cut(s) 29, 146, 206, 251, 293, 359, 480
Lsp1109I GCAGC 1 cut(s) 128
LweI GCATC 1 cut(s) 169
MaeI CTAG 2 cut(s) 176, 428
MaeII ACGT 2 cut(s) 47, 273
MaeIII GTNAC 1 cut(s) 43
MalI GATC 5 cut(s) 38, 298, 311, 356, 409
MboI GATC 5 cut(s) 36, 296, 309, 354, 407
MboII GAAGA 4 cut(s) 117, 313, 316, 491
MflI RGATCY 2 cut(s) 36, 407
MhlI GDGCHC 4 cut(s) 68, 232, 425, 464
MluCI AATT 1 cut(s) 480
Mly113I GGCGCC 1 cut(s) 492
MlyI GAGTC 2 cut(s) 152, 343
MmeI TCCRAC 1 cut(s) 147
MspI CCGG 7 cut(s) 16, 133, 193, 238, 280, 346, 467
MspR9I CCNGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
MvnI CGCG 6 cut(s) 217, 262, 319, 437, 458, 533
MwoI GCNNNNNNNGC 3 cut(s) 12, 133, 188
NarI GGCGCC 1 cut(s) 492
NciI CCSGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
NcoI CCATGG 1 cut(s) 68
NdeII GATC 5 cut(s) 36, 296, 309, 354, 407
NlaIII CATG 2 cut(s) 72, 236
NlaIV GGNNCC 4 cut(s) 65, 230, 433, 493
NmeAIII GCCGAG 1 cut(s) 125
NruI TCGCGA 2 cut(s) 217, 533
PcsI WCGNNNNNNNCGW 1 cut(s) 221
PkrI GCNGC 2 cut(s) 118, 321
PleI GAGTC 2 cut(s) 152, 342
PluTI GGCGCC 1 cut(s) 495
PmaCI CACGTG 1 cut(s) 274
PmlI CACGTG 1 cut(s) 274
PpsI GAGTC 2 cut(s) 152, 342
Ppu21I YACGTR 1 cut(s) 274
PspCI CACGTG 1 cut(s) 274
PspN4I GGNNCC 4 cut(s) 65, 230, 433, 493
PspOMI GGGCCC 1 cut(s) 228
PspPI GGNCC 5 cut(s) 56, 190, 228, 229, 257
PstI CTGCAG 1 cut(s) 541
PsuI RGATCY 2 cut(s) 36, 407
RruI TCGCGA 2 cut(s) 217, 533
SatI GCNGC 2 cut(s) 117, 320
Sau3AI GATC 5 cut(s) 36, 296, 309, 354, 407
Sau96I GGNCC 5 cut(s) 56, 190, 228, 229, 257
SchI GAGTC 2 cut(s) 152, 343
ScrFI CCNGG 8 cut(s) 17, 193, 194, 238, 239, 347, 467, 468
SduI GDGCHC 4 cut(s) 68, 232, 425, 464
SetI ASST 8 cut(s) 50, 112, 177, 276, 328, 380, 433, 446
SfaNI GCATC 1 cut(s) 169
SfcI CTRYAG 1 cut(s) 537
SfoI GGCGCC 1 cut(s) 493
SinI GGWCC 1 cut(s) 257
SmaI CCCGGG 3 cut(s) 194, 239, 468
SmlI CTYRAG 1 cut(s) 403
SmoI CTYRAG 1 cut(s) 403
Sse9I AATT 1 cut(s) 480
SsiI CCGC 7 cut(s) 13, 102, 149, 260, 319, 435, 448
SspDI GGCGCC 1 cut(s) 491
SspMI CTAG 2 cut(s) 176, 428
StyD4I CCNGG 8 cut(s) 15, 191, 192, 236, 237, 345, 465, 466
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 2 cut(s) 508, 518
TaiI ACGT 2 cut(s) 50, 276
TaqI TCGA 3 cut(s) 299, 357, 520
TasI AATT 1 cut(s) 480
TauI GCSGC 1 cut(s) 322
TseI GCWGC 1 cut(s) 116
TspGWI ACGGA 2 cut(s) 41, 78
TspMI CCCGGG 3 cut(s) 192, 237, 466
VneI GTGCAC 1 cut(s) 460
VpaK11BI GGWCC 1 cut(s) 257
XcmI CCANNNNNNNNNTGG 2 cut(s) 75, 239
XmaI CCCGGG 3 cut(s) 192, 237, 466
XspI CTAG 2 cut(s) 176, 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.