Rmu_sc0035508.1_g000007

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0035508.1
OG0000075
Physical Location & Seq
Reverse (-)
11862 .. 19679
7818 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0035508.1_g000007.1.cds

Sequence Viewer

Length: 1422 bp
atggtgggtcccgcctacgacatgcatccggtagtccgacacccatgctacctcgctatggtggaggttggccggtacctcgtagggaggccatcctcccatgatcttcaagaggcttcaagagaagcaataggcacatattgtcccacatcgagaatatctcaccaagcatctcggcggcactcaaatcccagaccacgtgcgtaccggtttgagaaattaattcaccccaggagctcaactccatcggtgattcaagttccagccccaccggtgcccagctactgctgtgggttaactccgaaatcatccaagcatctctttacgccaatccataccggtcaccagtccataatctcggtaacccacactcctgctctcggcacccaagcagcgacacttcggcgagacaacctaacaactcaaggtaaaatttatccttctctcccgctctcggtccctcacctcatcccggaggggagtttggcacactggccagcttcaccaagtcccggaagcggtttctcaaccggcagttctcggggactcacctcaccaagtccatctctcggtacccgggtactggtttggacactcaccggtgcccatactacccatcccggtgcctctcaagtcaacctcggccgagtatcctcttgtaccgaacgcgaggatgtgaggcgagcaatcgatgatgggatcgcgagaagaatggagttggagcgagcgctcgcggtggaggaggctggccgccaagaggccgaggatgccattgctccattgagggagtcaaacttggatcttaccgggaagctgcaactggcggaggatggtctgagattggtagatcaagttagagcccgggtaagcgaggctgaaaagcaggggcaggttggtaatttgcaaagggaggttaaccgtctatgggatgttgagcttgaagtaggcgagagggaggccgagatggagcggctcaggaaggagttagccgagcaacaaactcggtcgagtagctttgcagaggaatgcattcacctgcgcgctgctgccgagacatatcgggacaagcttcgcaaggccagttgtgatggggcggataaggcgattcgagatggtatcgttgctgggtggattgaccaggagaagatggtgcgtgatatgcaagccaagaaggcagcgaaatcgcaagccagtgcagcgagtggtggtcgaggttttgggatggtgatccaggagcaggcgatgtcggagtgtgcatcgggacaaactggcgaactcaaggtggagggtgctgttggtgagtgggagacccacgctgatatcgggggtgaggtacaaggcgagaacgctggagaacgagacaaagtggaggggtgtgatctggtagaggagcagacatgtagtgccgagggcgagacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

473

Amino Acids

51.4

Weight (kDa)

6.09

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1044
Acc36I ACCTGC 2 cut(s) 880, 1044
Acc65I GGTACC 2 cut(s) 75, 572
AccB1I GGYRCC 6 cut(s) 75, 274, 383, 572, 602, 623
AccBSI CCGCTC 2 cut(s) 451, 970
AccII CGCG 4 cut(s) 669, 704, 734, 1041
AciI CCGC 9 cut(s) 12, 178, 449, 519, 734, 751, 824, 970, 1094
AclWI GGATC 3 cut(s) 707, 807, 1222
AcoI YGGCCR 4 cut(s) 70, 494, 643, 748
AcsI RAATTY 1 cut(s) 432
AcvI CACGTG 1 cut(s) 200
AfaI GTAC 6 cut(s) 77, 206, 574, 582, 661, 1335
AfeI AGCGCT 1 cut(s) 729
AflIII ACRYGT 1 cut(s) 1397
AgeI ACCGGT 4 cut(s) 207, 271, 338, 599
AgsI TTSAA 4 cut(s) 110, 120, 257, 941
AjnI CCWGG 3 cut(s) 230, 1137, 1230
AluBI AGCT 7 cut(s) 237, 282, 500, 814, 937, 1014, 1069
AluI AGCT 7 cut(s) 237, 282, 500, 814, 937, 1014, 1069
Alw21I GWGCWC 1 cut(s) 239
Alw26I GTCTC 5 cut(s) 402, 1046, 1301, 1353, 1409
AlwI GGATC 3 cut(s) 707, 807, 1222
AlwNI CAGNNNCTG 1 cut(s) 285
Ama87I CYCGRG 3 cut(s) 540, 576, 861
Aor51HI AGCGCT 1 cut(s) 729
AoxI GGCC 8 cut(s) 70, 89, 494, 643, 748, 759, 957, 1077
ApeKI GCWGC 6 cut(s) 392, 814, 1043, 1046, 1175, 1196
ApoI RAATTY 1 cut(s) 432
AseI ATTAAT 1 cut(s) 221
AsiGI ACCGGT 4 cut(s) 207, 271, 338, 599
Asp700I GAANNNNTTC 1 cut(s) 1029
Asp718I GGTACC 2 cut(s) 75, 572
AspLEI GCGC 3 cut(s) 730, 1041, 1043
AspS9I GGNCC 2 cut(s) 8, 457
AsuC2I CCSGG 8 cut(s) 473, 513, 577, 578, 621, 808, 862, 863
AvaI CYCGRG 3 cut(s) 540, 576, 861
AvaII GGWCC 2 cut(s) 8, 457
BaeGI GKGCMC 2 cut(s) 279, 607
BaeI ACNNNNGTAYC 4 cut(s) 188, 221, 564, 597
BalI TGGCCA 1 cut(s) 496
BanI GGYRCC 6 cut(s) 75, 274, 383, 572, 602, 623
BanII GRGCYC 2 cut(s) 239, 862
BbrPI CACGTG 1 cut(s) 200
Bbv12I GWGCWC 1 cut(s) 239
BbvI GCAGC 6 cut(s) 404, 801, 1030, 1033, 1187, 1208
BcgI CGANNNNNNTGC 6 cut(s) 27, 61, 983, 1017, 1164, 1198
BciT130I CCWGG 3 cut(s) 232, 1139, 1232
BciVI GTATCC 1 cut(s) 661
BcnI CCSGG 8 cut(s) 473, 513, 577, 578, 621, 808, 862, 863
BcoDI GTCTC 5 cut(s) 402, 1046, 1301, 1353, 1409
BfoI RGCGCY 1 cut(s) 731
BfuAI ACCTGC 2 cut(s) 880, 1044
BfuI GTATCC 1 cut(s) 661
BglI GCCNNNNNGGC 1 cut(s) 1172
BisI GCNGC 9 cut(s) 179, 393, 751, 815, 971, 1044, 1047, 1176, 1197
BlsI GCNGC 9 cut(s) 180, 394, 752, 816, 972, 1045, 1048, 1177, 1198
Bme18I GGWCC 2 cut(s) 8, 457
BmeT110I CYCGRG 3 cut(s) 540, 576, 861
BmgT120I GGNCC 2 cut(s) 8, 457
BmiI GGNNCC 9 cut(s) 9, 10, 77, 276, 385, 459, 574, 604, 625
BmsI GCATC 5 cut(s) 34, 179, 325, 757, 1265
BplI GAGNNNNNCTC 4 cut(s) 145, 177, 226, 258
BpmI CTGGAG 1 cut(s) 1371
Bpu10I CCTNAGC 1 cut(s) 974
BpuEI CTTGAG 3 cut(s) 408, 615, 1262
BpuMI CCSGG 8 cut(s) 473, 513, 577, 578, 621, 808, 862, 863
Bsa29I ATCGAT 1 cut(s) 690
BsaAI YACGTR 1 cut(s) 200
BsaBI GATNNNNATC 1 cut(s) 1226
BsaI GGTCTC 1 cut(s) 1301
BsaJI CCNNGG 6 cut(s) 230, 576, 640, 762, 861, 1407
BsaWI WCCGGW 5 cut(s) 28, 207, 271, 338, 599
BsaXI ACNNNNNCTCC 2 cut(s) 355, 385
Bse118I RCCGGY 6 cut(s) 72, 207, 271, 338, 530, 599
Bse1I ACTGG 7 cut(s) 346, 497, 588, 825, 1080, 1191, 1273
Bse3DI GCAATG 1 cut(s) 771
Bse8I GATNNNNATC 1 cut(s) 1226
BseBI CCWGG 3 cut(s) 232, 1139, 1232
BseCI ATCGAT 1 cut(s) 690
BseDI CCNNGG 6 cut(s) 230, 576, 640, 762, 861, 1407
BseJI GATNNNNATC 1 cut(s) 1226
BseMI GCAATG 1 cut(s) 771
BseMII CTCAG 2 cut(s) 827, 988
BseNI ACTGG 7 cut(s) 346, 497, 588, 825, 1080, 1191, 1273
BsePI GCGCGC 1 cut(s) 1039
BseRI GAGGAG 2 cut(s) 755, 1403
BseSI GKGCMC 2 cut(s) 279, 607
BseX3I CGGCCG 1 cut(s) 643
BseXI GCAGC 6 cut(s) 404, 801, 1030, 1033, 1187, 1208
BseYI CCCAGC 2 cut(s) 278, 1124
BsgI GTGCAG 1 cut(s) 1215
Bsh1236I CGCG 4 cut(s) 669, 704, 734, 1041
Bsh1285I CGRYCG 2 cut(s) 646, 1007
BshFI GGCC 8 cut(s) 72, 91, 496, 645, 750, 761, 959, 1079
BshNI GGYRCC 6 cut(s) 75, 274, 383, 572, 602, 623
BshTI ACCGGT 4 cut(s) 207, 271, 338, 599
BshVI ATCGAT 1 cut(s) 690
BsiEI CGRYCG 2 cut(s) 646, 1007
BsiHKAI GWGCWC 1 cut(s) 239
BsiHKCI CYCGRG 3 cut(s) 540, 576, 861
BslFI GGGAC 6 cut(s) 129, 443, 495, 558, 1076, 1275
BsmAI GTCTC 5 cut(s) 402, 1046, 1301, 1353, 1409
BsmFI GGGAC 6 cut(s) 129, 443, 495, 558, 1076, 1275
BsmI GAATGC 2 cut(s) 1029, 1031
BsnI GGCC 8 cut(s) 72, 91, 496, 645, 750, 761, 959, 1079
Bso31I GGTCTC 1 cut(s) 1301
BsoBI CYCGRG 3 cut(s) 540, 576, 861
Bsp1286I GDGCHC 4 cut(s) 239, 279, 607, 862
Bsp143I GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
Bsp68I TCGCGA 1 cut(s) 704
BspACI CCGC 9 cut(s) 12, 178, 449, 519, 734, 751, 824, 970, 1094
BspANI GGCC 8 cut(s) 72, 91, 496, 645, 750, 761, 959, 1079
BspCNI CTCAG 2 cut(s) 828, 987
BspDI ATCGAT 1 cut(s) 690
BspFNI CGCG 4 cut(s) 669, 704, 734, 1041
BspLI GGNNCC 9 cut(s) 9, 10, 77, 276, 385, 459, 574, 604, 625
BspMI ACCTGC 2 cut(s) 880, 1044
BspPI GGATC 3 cut(s) 707, 807, 1222
BspT107I GGYRCC 6 cut(s) 75, 274, 383, 572, 602, 623
BspTNI GGTCTC 1 cut(s) 1301
BsrBI CCGCTC 2 cut(s) 451, 970
BsrDI GCAATG 1 cut(s) 771
BsrFI RCCGGY 6 cut(s) 72, 207, 271, 338, 530, 599
BsrI ACTGG 7 cut(s) 346, 497, 588, 825, 1080, 1191, 1273
BssAI RCCGGY 6 cut(s) 72, 207, 271, 338, 530, 599
BssECI CCNNGG 6 cut(s) 230, 576, 640, 762, 861, 1407
BssHII GCGCGC 1 cut(s) 1039
BssMI GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
Bst2UI CCWGG 3 cut(s) 232, 1139, 1232
Bst4CI ACNGT 1 cut(s) 920
BstBAI YACGTR 1 cut(s) 200
BstC8I GCNNGC 9 cut(s) 498, 684, 726, 732, 748, 1041, 1164, 1188, 1239
BstDEI CTNAG 2 cut(s) 836, 974
BstEII GGTNACC 2 cut(s) 341, 361
BstFNI CGCG 4 cut(s) 669, 704, 734, 1041
BstH2I RGCGCY 1 cut(s) 731
BstHHI GCGC 3 cut(s) 730, 1041, 1043
BstKTI GATC 6 cut(s) 106, 702, 802, 850, 1230, 1381
BstMAI GTCTC 5 cut(s) 402, 1046, 1301, 1353, 1409
BstMBI GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
BstMCI CGRYCG 2 cut(s) 646, 1007
BstMWI GCNNNNNNNGC 5 cut(s) 767, 1100, 1159, 1172, 1196
BstNI CCWGG 3 cut(s) 232, 1139, 1232
BstNSI RCATGY 2 cut(s) 25, 1401
BstPI GGTNACC 2 cut(s) 341, 361
BstSLI GKGCMC 2 cut(s) 279, 607
BstUI CGCG 4 cut(s) 669, 704, 734, 1041
BstV1I GCAGC 6 cut(s) 404, 801, 1030, 1033, 1187, 1208
BstX2I RGATCY 1 cut(s) 799
BstYI RGATCY 1 cut(s) 799
BstZI CGGCCG 1 cut(s) 643
Bsu15I ATCGAT 1 cut(s) 690
BsuI GTATCC 1 cut(s) 661
BsuRI GGCC 8 cut(s) 72, 91, 496, 645, 750, 761, 959, 1079
BsuTUI ATCGAT 1 cut(s) 690
BtgZI GCGATG 1 cut(s) 1256
BtsIMutI CAGTG 2 cut(s) 490, 1198
BtuMI TCGCGA 1 cut(s) 704
BveI ACCTGC 2 cut(s) 880, 1044
Cac8I GCNNGC 9 cut(s) 498, 684, 726, 732, 748, 1041, 1164, 1188, 1239
CaiI CAGNNNCTG 1 cut(s) 285
CfoI GCGC 3 cut(s) 730, 1041, 1043
Cfr10I RCCGGY 6 cut(s) 72, 207, 271, 338, 530, 599
Cfr13I GGNCC 2 cut(s) 8, 457
Cfr9I CCCGGG 2 cut(s) 576, 861
ClaI ATCGAT 1 cut(s) 690
Csp6I GTAC 6 cut(s) 76, 205, 573, 581, 660, 1334
CspAI ACCGGT 4 cut(s) 207, 271, 338, 599
CviAII CATG 4 cut(s) 22, 45, 101, 1398
CviQI GTAC 6 cut(s) 76, 205, 573, 581, 660, 1334
DdeI CTNAG 2 cut(s) 836, 974
DpnI GATC 6 cut(s) 105, 701, 801, 849, 1229, 1380
DpnII GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
EaeI YGGCCR 4 cut(s) 70, 494, 643, 748
EagI CGGCCG 1 cut(s) 643
EciI GGCGGA 2 cut(s) 839, 1109
Ecl136II GAGCTC 1 cut(s) 237
EclXI CGGCCG 1 cut(s) 643
Eco24I GRGCYC 2 cut(s) 239, 862
Eco31I GGTCTC 1 cut(s) 1301
Eco32I GATATC 1 cut(s) 1321
Eco47I GGWCC 2 cut(s) 8, 457
Eco47III AGCGCT 1 cut(s) 729
Eco52I CGGCCG 1 cut(s) 643
Eco53kI GAGCTC 1 cut(s) 237
Eco72I CACGTG 1 cut(s) 200
Eco88I CYCGRG 3 cut(s) 540, 576, 861
Eco91I GGTNACC 2 cut(s) 341, 361
EcoICRI GAGCTC 1 cut(s) 237
EcoO109I RGGNCCY 1 cut(s) 8
EcoO65I GGTNACC 2 cut(s) 341, 361
EcoRII CCWGG 3 cut(s) 230, 1137, 1230
EcoRV GATATC 1 cut(s) 1321
EcoT22I ATGCAT 2 cut(s) 27, 1031
EcoT38I GRGCYC 2 cut(s) 239, 862
FaeI CATG 4 cut(s) 25, 48, 104, 1401
FalI AAGNNNNNCTT 2 cut(s) 305, 337
FaqI GGGAC 6 cut(s) 129, 443, 495, 558, 1076, 1275
FatI CATG 4 cut(s) 21, 44, 100, 1397
FauI CCCGC 2 cut(s) 19, 456
Fnu4HI GCNGC 9 cut(s) 179, 393, 751, 815, 971, 1044, 1047, 1176, 1197
FriOI GRGCYC 2 cut(s) 239, 862
Fsp4HI GCNGC 9 cut(s) 179, 393, 751, 815, 971, 1044, 1047, 1176, 1197
GlaI GCGC 3 cut(s) 729, 1040, 1042
GluI GCNGC 9 cut(s) 179, 393, 751, 815, 971, 1044, 1047, 1176, 1197
GsaI CCCAGC 2 cut(s) 282, 1128
GsuI CTGGAG 1 cut(s) 1371
HaeII RGCGCY 1 cut(s) 731
HaeIII GGCC 8 cut(s) 72, 91, 496, 645, 750, 761, 959, 1079
HhaI GCGC 3 cut(s) 730, 1041, 1043
Hin1II CATG 4 cut(s) 25, 48, 104, 1401
Hin6I GCGC 3 cut(s) 728, 1039, 1041
HinP1I GCGC 3 cut(s) 728, 1039, 1041
HincII GTYRAC 3 cut(s) 297, 637, 916
HindII GTYRAC 3 cut(s) 297, 637, 916
HindIII AAGCTT 1 cut(s) 1067
HinfI GANTC 4 cut(s) 253, 546, 788, 1105
HpaI GTTAAC 2 cut(s) 297, 916
Hpy166II GTNNAC 3 cut(s) 297, 637, 916
Hpy188I TCNGA 4 cut(s) 38, 303, 837, 1249
Hpy188III TCNNGA 8 cut(s) 110, 120, 153, 703, 976, 1061, 1109, 1260
Hpy8I GTNNAC 3 cut(s) 297, 637, 916
HpyAV CCTTC 3 cut(s) 450, 973, 1165
HpyCH4III ACNGT 1 cut(s) 920
HpyCH4IV ACGT 1 cut(s) 199
HpyCH4V TGCA 8 cut(s) 25, 817, 904, 1019, 1029, 1162, 1196, 1256
HpyF10VI GCNNNNNNNGC 5 cut(s) 767, 1100, 1159, 1172, 1196
HpyF3I CTNAG 2 cut(s) 836, 974
HpySE526I ACGT 1 cut(s) 199
Hsp92II CATG 4 cut(s) 25, 48, 104, 1401
HspAI GCGC 3 cut(s) 728, 1039, 1041
KflI GGGWCCC 1 cut(s) 8
KpnI GGTACC 2 cut(s) 79, 576
KspAI GTTAAC 2 cut(s) 297, 916
Kzo9I GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
LmnI GCTCC 6 cut(s) 234, 721, 781, 967, 1234, 1390
Lsp1109I GCAGC 6 cut(s) 404, 801, 1030, 1033, 1187, 1208
LweI GCATC 5 cut(s) 34, 179, 325, 757, 1265
MaeII ACGT 1 cut(s) 199
MaeIII GTNAC 2 cut(s) 341, 361
MalI GATC 6 cut(s) 105, 701, 801, 849, 1229, 1380
MbiI CCGCTC 2 cut(s) 451, 970
MboI GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
MboII GAAGA 3 cut(s) 98, 720, 1156
MflI RGATCY 1 cut(s) 799
MhlI GDGCHC 4 cut(s) 239, 279, 607, 862
MlsI TGGCCA 1 cut(s) 496
MluCI AATT 4 cut(s) 218, 222, 432, 898
MluNI TGGCCA 1 cut(s) 496
MlyI GAGTC 2 cut(s) 540, 797
MmeI TCCRAC 3 cut(s) 61, 699, 1227
Mox20I TGGCCA 1 cut(s) 496
Mph1103I ATGCAT 2 cut(s) 27, 1031
MroXI GAANNNNTTC 1 cut(s) 1029
MscI TGGCCA 1 cut(s) 496
MseI TTAA 3 cut(s) 221, 296, 915
MslI CAYNNNNRTG 1 cut(s) 621
Msp20I TGGCCA 1 cut(s) 496
Mva1269I GAATGC 2 cut(s) 1029, 1031
MvaI CCWGG 3 cut(s) 232, 1139, 1232
MvnI CGCG 4 cut(s) 669, 704, 734, 1041
MwoI GCNNNNNNNGC 5 cut(s) 767, 1100, 1159, 1172, 1196
NciI CCSGG 8 cut(s) 473, 513, 577, 578, 621, 808, 862, 863
NdeII GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
NlaIII CATG 4 cut(s) 25, 48, 104, 1401
NlaIV GGNNCC 9 cut(s) 9, 10, 77, 276, 385, 459, 574, 604, 625
NmeAIII GCCGAG 8 cut(s) 154, 360, 621, 671, 787, 985, 1015, 1075
NmuCI GTSAC 1 cut(s) 341
NruI TCGCGA 1 cut(s) 704
NsiI ATGCAT 2 cut(s) 27, 1031
NspI RCATGY 2 cut(s) 25, 1401
PaqCI CACCTGC 1 cut(s) 1044
PauI GCGCGC 1 cut(s) 1039
PciI ACATGT 1 cut(s) 1397
PctI GAATGC 2 cut(s) 1029, 1031
PdmI GAANNNNTTC 1 cut(s) 1029
PfeI GAWTC 2 cut(s) 253, 1105
PfoI TCCNGGA 3 cut(s) 471, 511, 1230
PinAI ACCGGT 4 cut(s) 207, 271, 338, 599
PkrI GCNGC 9 cut(s) 180, 394, 752, 816, 972, 1045, 1048, 1177, 1198
PleI GAGTC 2 cut(s) 540, 796
PmaCI CACGTG 1 cut(s) 200
PmlI CACGTG 1 cut(s) 200
PpsI GAGTC 2 cut(s) 540, 796
Ppu21I YACGTR 1 cut(s) 200
PpuMI RGGWCCY 1 cut(s) 8
PscI ACATGT 1 cut(s) 1397
PshBI ATTAAT 1 cut(s) 221
Psp124BI GAGCTC 1 cut(s) 239
Psp5II RGGWCCY 1 cut(s) 8
Psp6I CCWGG 3 cut(s) 230, 1137, 1230
PspCI CACGTG 1 cut(s) 200
PspEI GGTNACC 2 cut(s) 341, 361
PspFI CCCAGC 2 cut(s) 278, 1124
PspGI CCWGG 3 cut(s) 230, 1137, 1230
PspN4I GGNNCC 9 cut(s) 9, 10, 77, 276, 385, 459, 574, 604, 625
PspPI GGNCC 2 cut(s) 8, 457
PspPPI RGGWCCY 1 cut(s) 8
PstNI CAGNNNCTG 1 cut(s) 285
PsuI RGATCY 1 cut(s) 799
PteI GCGCGC 1 cut(s) 1039
RruI TCGCGA 1 cut(s) 704
RsaI GTAC 6 cut(s) 77, 206, 574, 582, 661, 1335
RsaNI GTAC 6 cut(s) 76, 205, 573, 581, 660, 1334
RseI CAYNNNNRTG 1 cut(s) 621
SacI GAGCTC 1 cut(s) 239
SaqAI TTAA 3 cut(s) 221, 296, 915
SatI GCNGC 9 cut(s) 179, 393, 751, 815, 971, 1044, 1047, 1176, 1197
Sau3AI GATC 6 cut(s) 103, 699, 799, 847, 1227, 1378
Sau96I GGNCC 2 cut(s) 8, 457
SchI GAGTC 2 cut(s) 540, 797
SduI GDGCHC 4 cut(s) 239, 279, 607, 862
SfaNI GCATC 5 cut(s) 34, 179, 325, 757, 1265
SgrAI CRCCGGYG 2 cut(s) 271, 599
SinI GGWCC 2 cut(s) 8, 457
SmaI CCCGGG 2 cut(s) 578, 863
SmiMI CAYNNNNRTG 1 cut(s) 621
SmlI CTYRAG 3 cut(s) 423, 630, 1277
SmoI CTYRAG 3 cut(s) 423, 630, 1277
Sse9I AATT 4 cut(s) 218, 222, 432, 898
SsiI CCGC 9 cut(s) 12, 178, 449, 519, 734, 751, 824, 970, 1094
SstI GAGCTC 1 cut(s) 239
TaaI ACNGT 1 cut(s) 920
TaiI ACGT 1 cut(s) 202
TaqI TCGA 5 cut(s) 152, 690, 1007, 1108, 1210
TaqII GACCGA 2 cut(s) 445, 993
TasI AATT 4 cut(s) 218, 222, 432, 898
TauI GCSGC 3 cut(s) 181, 753, 973
TfiI GAWTC 2 cut(s) 253, 1105
Tru1I TTAA 3 cut(s) 221, 296, 915
Tru9I TTAA 3 cut(s) 221, 296, 915
TscAI CASTG 2 cut(s) 497, 1198
TseFI GTSAC 1 cut(s) 341
TseI GCWGC 6 cut(s) 392, 814, 1043, 1046, 1175, 1196
Tsp45I GTSAC 1 cut(s) 341
TspMI CCCGGG 2 cut(s) 576, 861
TspRI CASTG 2 cut(s) 497, 1198
VpaK11BI GGWCC 2 cut(s) 8, 457
VspI ATTAAT 1 cut(s) 221
XapI RAATTY 1 cut(s) 432
XceI RCATGY 2 cut(s) 25, 1401
XmaI CCCGGG 2 cut(s) 576, 861
XmnI GAANNNNTTC 1 cut(s) 1029
Zsp2I ATGCAT 2 cut(s) 27, 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.