Rmu_ssc0000175.1_g000018

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000175.1
OG0000075
Physical Location & Seq
Forward (+)
67607 .. 68935
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000175.1_g000018.1.cds

Sequence Viewer

Length: 873 bp
atgatagtggagggggctgctcatgtcgagaggacagcgacagctgcccaaaagaagatagaactaccaaggttagaggatctgatgagaggtgtttcatggagccctggagggtcccaacctaggggatcagagtcttcccagtcctccaggtcatcctcgcatggtgctggtacttccacttacgcgcacctgaagagagattctaccgctcggaagcttgccaagagtctgaggaagagaggtatcgaggaagattgtattcctcaattggttgcagatctgcgggaccttccccatatcgataccggtaatgagttggctgatttttctatttctcaggagaaactgatgagggctgtttgcatgaactatcatactggtaacagactcagggcttcgatcgagtccatgaataatttgcaggctgaactggatgctgagaggacaacattgaaatactatgaatcaactgtgcaacaaaccttgaagacaagtgataacctgtccgcgaagctgaagcaggctgaggaagctcttgccaatgagaggaaagccggtattgatggccggaaatatatagaagagttggaaaagaaaaatgaagcccacactactagaataatgtcattagacatcaccactattaaatcggtcaggattgcaattgatgttaaaaaacatgttaacatcaccgcctccgacctgaccccgagtccccgacatcagtctctgaccccgtgtttccctgcctcgctccctgaccacgagtccccgatctcgttctccagacctctagacctcgagcttgatctatcatcatctgcactcccagtccgatcgattgatctgtttgcctctttctctcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

290

Amino Acids

32.1

Weight (kDa)

7.77

Isoelectric Point (pI)

54.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 212
AccII CGCG 2 cut(s) 188, 512
AciI CCGC 4 cut(s) 210, 286, 510, 696
AclWI GGATC 2 cut(s) 87, 136
AcoI YGGCCR 1 cut(s) 568
AcuI CTGAAG 2 cut(s) 215, 539
AfaI GTAC 1 cut(s) 175
AfiI CCNNNNNNNGG 3 cut(s) 123, 124, 549
AflIII ACRYGT 1 cut(s) 682
AgeI ACCGGT 1 cut(s) 308
AgsI TTSAA 2 cut(s) 457, 490
AhdI GACNNNNNGTC 2 cut(s) 714, 769
AjnI CCWGG 2 cut(s) 106, 149
AluBI AGCT 5 cut(s) 44, 220, 517, 536, 808
AluI AGCT 5 cut(s) 44, 220, 517, 536, 808
Alw26I GTCTC 1 cut(s) 735
AlwI GGATC 2 cut(s) 87, 136
AlwNI CAGNNNCTG 1 cut(s) 733
Ama87I CYCGRG 2 cut(s) 712, 803
AoxI GGCC 1 cut(s) 568
ApeKI GCWGC 2 cut(s) 17, 44
AsiGI ACCGGT 1 cut(s) 308
AspA2I CCTAGG 1 cut(s) 122
AspLEI GCGC 1 cut(s) 190
AspS9I GGNCC 2 cut(s) 114, 289
AsuHPI GGTGA 2 cut(s) 631, 685
AvaI CYCGRG 2 cut(s) 712, 803
AvaII GGWCC 2 cut(s) 114, 289
AvrII CCTAGG 1 cut(s) 122
BanII GRGCYC 1 cut(s) 107
BauI CACGAG 1 cut(s) 767
BbsI GAAGAC 2 cut(s) 129, 497
BbvCI CCTCAGC 1 cut(s) 528
BbvI GCAGC 2 cut(s) 4, 31
BccI CCATC 1 cut(s) 560
BciT130I CCWGG 2 cut(s) 108, 151
BcoDI GTCTC 1 cut(s) 735
BfaI CTAG 4 cut(s) 123, 618, 797, 871
BglII AGATCT 1 cut(s) 280
BisI GCNGC 2 cut(s) 18, 45
BlnI CCTAGG 1 cut(s) 122
BlsI GCNGC 2 cut(s) 19, 46
Bme1390I CCNGG 2 cut(s) 108, 151
Bme18I GGWCC 2 cut(s) 114, 289
BmeRI GACNNNNNGTC 2 cut(s) 714, 769
BmeT110I CYCGRG 2 cut(s) 712, 803
BmgT120I GGNCC 2 cut(s) 114, 289
BmiI GGNNCC 4 cut(s) 104, 115, 116, 290
BmrFI CCNGG 2 cut(s) 108, 151
BmrI ACTGGG 2 cut(s) 136, 827
BmsI GCATC 1 cut(s) 427
BmuI ACTGGG 2 cut(s) 136, 827
BoxI GACNNNNGTC 1 cut(s) 727
BpiI GAAGAC 2 cut(s) 129, 497
BpmI CTGGAG 3 cut(s) 129, 133, 772
Bpu10I CCTNAGC 1 cut(s) 528
Bsa29I ATCGAT 2 cut(s) 303, 842
BsaJI CCNNGG 3 cut(s) 68, 106, 122
BsaWI WCCGGW 1 cut(s) 308
Bsc4I CCNNNNNNNGG 3 cut(s) 123, 124, 549
Bse118I RCCGGY 2 cut(s) 308, 557
Bse1I ACTGG 4 cut(s) 142, 385, 438, 833
BseBI CCWGG 2 cut(s) 108, 151
BseCI ATCGAT 2 cut(s) 303, 842
BseDI CCNNGG 3 cut(s) 68, 106, 122
BseGI GGATG 2 cut(s) 155, 442
BseLI CCNNNNNNNGG 3 cut(s) 123, 124, 549
BseMII CTCAG 5 cut(s) 224, 353, 406, 432, 519
BseNI ACTGG 4 cut(s) 142, 385, 438, 833
BseXI GCAGC 2 cut(s) 4, 31
BsgI GTGCAG 1 cut(s) 810
Bsh1236I CGCG 2 cut(s) 188, 512
Bsh1285I CGRYCG 2 cut(s) 405, 842
BshFI GGCC 1 cut(s) 570
BshTI ACCGGT 1 cut(s) 308
BshVI ATCGAT 2 cut(s) 303, 842
BsiEI CGRYCG 2 cut(s) 405, 842
BsiHKCI CYCGRG 2 cut(s) 712, 803
BsiSI CCGG 3 cut(s) 309, 558, 571
BslFI GGGAC 4 cut(s) 100, 302, 702, 757
BslI CCNNNNNNNGG 3 cut(s) 123, 124, 549
BsmAI GTCTC 1 cut(s) 735
BsmFI GGGAC 4 cut(s) 100, 302, 702, 757
BsnI GGCC 1 cut(s) 570
BsoBI CYCGRG 2 cut(s) 712, 803
Bsp1286I GDGCHC 1 cut(s) 107
Bsp143I GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
BspACI CCGC 4 cut(s) 210, 286, 510, 696
BspANI GGCC 1 cut(s) 570
BspCNI CTCAG 5 cut(s) 225, 352, 405, 433, 520
BspDI ATCGAT 2 cut(s) 303, 842
BspFNI CGCG 2 cut(s) 188, 512
BspLI GGNNCC 4 cut(s) 104, 115, 116, 290
BspPI GGATC 2 cut(s) 87, 136
BsrBI CCGCTC 1 cut(s) 212
BsrFI RCCGGY 2 cut(s) 308, 557
BsrI ACTGG 4 cut(s) 142, 385, 438, 833
BssAI RCCGGY 2 cut(s) 308, 557
BssECI CCNNGG 3 cut(s) 68, 106, 122
BssMI GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
BssSI CACGAG 1 cut(s) 767
BssT1I CCWWGG 2 cut(s) 68, 122
Bst2BI CACGAG 1 cut(s) 767
Bst2UI CCWGG 2 cut(s) 108, 151
Bst4CI ACNGT 1 cut(s) 475
Bst6I CTCTTC 3 cut(s) 191, 233, 579
BstC8I GCNNGC 3 cut(s) 222, 426, 525
BstDEI CTNAG 5 cut(s) 233, 339, 392, 441, 528
BstF5I GGATG 2 cut(s) 155, 442
BstFNI CGCG 2 cut(s) 188, 512
BstHHI GCGC 1 cut(s) 190
BstKTI GATC 8 cut(s) 82, 131, 283, 405, 780, 814, 842, 850
BstMAI GTCTC 1 cut(s) 735
BstMBI GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
BstMCI CGRYCG 2 cut(s) 405, 842
BstMWI GCNNNNNNNGC 2 cut(s) 44, 533
BstNI CCWGG 2 cut(s) 108, 151
BstNSI RCATGY 1 cut(s) 686
BstPAI GACNNNNGTC 1 cut(s) 727
BstSCI CCNGG 2 cut(s) 106, 149
BstUI CGCG 2 cut(s) 188, 512
BstV1I GCAGC 2 cut(s) 4, 31
BstV2I GAAGAC 2 cut(s) 129, 497
BstX2I RGATCY 2 cut(s) 79, 280
BstYI RGATCY 2 cut(s) 79, 280
Bsu15I ATCGAT 2 cut(s) 303, 842
BsuRI GGCC 1 cut(s) 570
BsuTUI ATCGAT 2 cut(s) 303, 842
BtsCI GGATG 2 cut(s) 155, 442
Cac8I GCNNGC 3 cut(s) 222, 426, 525
CaiI CAGNNNCTG 1 cut(s) 733
CfoI GCGC 1 cut(s) 190
Cfr10I RCCGGY 2 cut(s) 308, 557
Cfr13I GGNCC 2 cut(s) 114, 289
ClaI ATCGAT 2 cut(s) 303, 842
Csp6I GTAC 1 cut(s) 174
CspAI ACCGGT 1 cut(s) 308
CviAII CATG 6 cut(s) 23, 99, 164, 367, 412, 683
CviQI GTAC 1 cut(s) 174
DdeI CTNAG 5 cut(s) 233, 339, 392, 441, 528
DpnI GATC 8 cut(s) 81, 130, 282, 404, 779, 813, 841, 849
DpnII GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
DriI GACNNNNNGTC 2 cut(s) 714, 769
EaeI YGGCCR 1 cut(s) 568
Eam1104I CTCTTC 3 cut(s) 191, 233, 579
Eam1105I GACNNNNNGTC 2 cut(s) 714, 769
EarI CTCTTC 3 cut(s) 191, 233, 579
Eco130I CCWWGG 2 cut(s) 68, 122
Eco24I GRGCYC 1 cut(s) 107
Eco47I GGWCC 2 cut(s) 114, 289
Eco57I CTGAAG 2 cut(s) 215, 539
Eco88I CYCGRG 2 cut(s) 712, 803
EcoO109I RGGNCCY 2 cut(s) 114, 289
EcoRII CCWGG 2 cut(s) 106, 149
EcoT14I CCWWGG 2 cut(s) 68, 122
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 2 cut(s) 68, 122
FaeI CATG 6 cut(s) 26, 102, 167, 370, 415, 686
FaqI GGGAC 4 cut(s) 100, 302, 702, 757
FatI CATG 6 cut(s) 22, 98, 163, 366, 411, 682
FauI CCCGC 1 cut(s) 279
Fnu4HI GCNGC 2 cut(s) 18, 45
FokI GGATG 2 cut(s) 142, 449
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 2 cut(s) 18, 45
FspBI CTAG 4 cut(s) 123, 618, 797, 871
GlaI GCGC 1 cut(s) 189
GluI GCNGC 2 cut(s) 18, 45
GsuI CTGGAG 3 cut(s) 129, 133, 772
HaeIII GGCC 1 cut(s) 570
HapII CCGG 3 cut(s) 309, 558, 571
HhaI GCGC 1 cut(s) 190
Hin1II CATG 6 cut(s) 26, 102, 167, 370, 415, 686
Hin6I GCGC 1 cut(s) 188
HinP1I GCGC 1 cut(s) 188
HincII GTYRAC 1 cut(s) 688
HindII GTYRAC 1 cut(s) 688
HindIII AAGCTT 1 cut(s) 218
HinfI GANTC 8 cut(s) 134, 203, 229, 390, 407, 467, 715, 770
HpaI GTTAAC 1 cut(s) 688
HpaII CCGG 3 cut(s) 309, 558, 571
HphI GGTGA 2 cut(s) 631, 685
Hpy166II GTNNAC 1 cut(s) 688
Hpy188I TCNGA 7 cut(s) 84, 133, 216, 234, 703, 735, 839
Hpy188III TCNNGA 5 cut(s) 28, 341, 658, 789, 797
Hpy8I GTNNAC 1 cut(s) 688
HpyAV CCTTC 1 cut(s) 302
HpyCH4III ACNGT 1 cut(s) 475
HpyCH4V TGCA 6 cut(s) 278, 366, 424, 478, 665, 827
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 533
HpyF3I CTNAG 5 cut(s) 233, 339, 392, 441, 528
Hsp92II CATG 6 cut(s) 26, 102, 167, 370, 415, 686
HspAI GCGC 1 cut(s) 188
KflI GGGWCCC 1 cut(s) 114
KspAI GTTAAC 1 cut(s) 688
Kzo9I GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
LmnI GCTCC 2 cut(s) 102, 762
Lsp1109I GCAGC 2 cut(s) 4, 31
LweI GCATC 1 cut(s) 427
MaeI CTAG 4 cut(s) 123, 618, 797, 871
MaeIII GTNAC 1 cut(s) 383
MalI GATC 8 cut(s) 81, 130, 282, 404, 779, 813, 841, 849
MbiI CCGCTC 1 cut(s) 212
MboI GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
MboII GAAGA 7 cut(s) 67, 129, 208, 250, 266, 502, 596
MfeI CAATTG 2 cut(s) 269, 666
MflI RGATCY 2 cut(s) 79, 280
MhlI GDGCHC 1 cut(s) 107
MluCI AATT 3 cut(s) 269, 418, 666
MlyI GAGTC 6 cut(s) 143, 238, 384, 416, 724, 779
MmeI TCCRAC 2 cut(s) 570, 726
MseI TTAA 3 cut(s) 648, 675, 687
MspA1I CMGCKG 1 cut(s) 44
MspI CCGG 3 cut(s) 309, 558, 571
MspR9I CCNGG 2 cut(s) 108, 151
MunI CAATTG 2 cut(s) 269, 666
MvaI CCWGG 2 cut(s) 108, 151
MvnI CGCG 2 cut(s) 188, 512
MwoI GCNNNNNNNGC 2 cut(s) 44, 533
NdeII GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
NlaIII CATG 6 cut(s) 26, 102, 167, 370, 415, 686
NlaIV GGNNCC 4 cut(s) 104, 115, 116, 290
NspI RCATGY 1 cut(s) 686
PaeR7I CTCGAG 1 cut(s) 803
PciI ACATGT 1 cut(s) 682
PfeI GAWTC 2 cut(s) 203, 467
PinAI ACCGGT 1 cut(s) 308
PkrI GCNGC 2 cut(s) 19, 46
Ple19I CGATCG 2 cut(s) 405, 842
PleI GAGTC 6 cut(s) 142, 237, 384, 415, 723, 778
PpsI GAGTC 6 cut(s) 142, 237, 384, 415, 723, 778
PpuMI RGGWCCY 2 cut(s) 114, 289
PscI ACATGT 1 cut(s) 682
PshAI GACNNNNGTC 1 cut(s) 727
Psp5II RGGWCCY 2 cut(s) 114, 289
Psp6I CCWGG 2 cut(s) 106, 149
PspGI CCWGG 2 cut(s) 106, 149
PspN4I GGNNCC 4 cut(s) 104, 115, 116, 290
PspPI GGNCC 2 cut(s) 114, 289
PspPPI RGGWCCY 2 cut(s) 114, 289
PspXI VCTCGAGB 1 cut(s) 803
PstNI CAGNNNCTG 1 cut(s) 733
PsuI RGATCY 2 cut(s) 79, 280
PvuI CGATCG 2 cut(s) 405, 842
PvuII CAGCTG 1 cut(s) 44
RsaI GTAC 1 cut(s) 175
RsaNI GTAC 1 cut(s) 174
SaqAI TTAA 3 cut(s) 648, 675, 687
SatI GCNGC 2 cut(s) 18, 45
Sau3AI GATC 8 cut(s) 79, 128, 280, 402, 777, 811, 839, 847
Sau96I GGNCC 2 cut(s) 114, 289
SchI GAGTC 6 cut(s) 143, 238, 384, 416, 724, 779
ScrFI CCNGG 2 cut(s) 108, 151
SduI GDGCHC 1 cut(s) 107
SfaNI GCATC 1 cut(s) 427
Sfr274I CTCGAG 1 cut(s) 803
SinI GGWCC 2 cut(s) 114, 289
SlaI CTCGAG 1 cut(s) 803
SmlI CTYRAG 1 cut(s) 803
SmoI CTYRAG 1 cut(s) 803
Sse9I AATT 3 cut(s) 269, 418, 666
SsiI CCGC 4 cut(s) 210, 286, 510, 696
SspMI CTAG 4 cut(s) 123, 618, 797, 871
StyD4I CCNGG 2 cut(s) 106, 149
StyI CCWWGG 2 cut(s) 68, 122
TaaI ACNGT 1 cut(s) 475
TaqI TCGA 7 cut(s) 27, 249, 303, 401, 405, 804, 842
TaqII GACCGA 1 cut(s) 643
TasI AATT 3 cut(s) 269, 418, 666
TfiI GAWTC 2 cut(s) 203, 467
Tru1I TTAA 3 cut(s) 648, 675, 687
Tru9I TTAA 3 cut(s) 648, 675, 687
TseI GCWGC 2 cut(s) 17, 44
TspDTI ATGAA 5 cut(s) 87, 383, 428, 480, 618
VpaK11BI GGWCC 2 cut(s) 114, 289
XbaI TCTAGA 1 cut(s) 796
XceI RCATGY 1 cut(s) 686
XhoI CTCGAG 1 cut(s) 803
XmaJI CCTAGG 1 cut(s) 122
XspI CTAG 4 cut(s) 123, 618, 797, 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.