Rmu_sc0022755.1_g000003

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022755.1
OG0000075
Physical Location & Seq
Reverse (-)
4325 .. 6188
1864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022755.1_g000003.1.cds

Sequence Viewer

Length: 1065 bp
atgcaggagagcgcaaggcagtcccccagagtttcttcgggaggggtggagcgtggtgtcatgaatgagccatcggagccaggcgtcgaagtggagatctccacggaggaacagttggaggaagctgaatggtgccaaaccgatactaatgccaaggctcgcttagtacaggatattgtgttggagcagctggatgctgtttttggtgatgacgttggtgatccggtgttgagagaagtgattactgtatacagcggggaagctaaagtgacaagccaagccgttggtgatgtgattcaggctgctgaggtgcctgaggtttgtcaggagattggggagggcgatgtcagggatagtcaggaggctcgttgtcgagaggttgaggacgctgttgcttttctgagggagtcaaacctggacttgactagtaacttgcagcgggccaaggctagtttgaaagcctttgaggaggttaggacccgagtttgtgttgccgaggaacgtttgcgagagttggagaggcaggtccgagagcgcgatgtcgagttggaggtttgcgacacagctttggagagtttggctccttatcctgatcgcgttgtggagttggatgggcaggagttgagtgagcagtacactcgggctagtaccttcgctgaggagtgcattcgactacgttccgctgccgagacgcattttgacaagctcaaggaggccaaaagagatggtgcagccaaggcagtggatcactatcttctgtcggcctactttcaagagaagataattaaggctttcttagatggggccctcaactcgattagtgatggtatcgccgctggctggattgaccaagagaaaatggtcaacgatatgcaggcaaagaaagcagcgagatcgcaaactagtgccgcgagtggtggttgcggcggggggattgttatccgcgaaccagctactgccactgaatgcgtctcgagcctagctggtgattgggaggcggagggtgctgatatgggcgaacaaggggaagcgtgcttagatgccgaggtcgagttgcagggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

354

Amino Acids

38.6

Weight (kDa)

4.37

Isoelectric Point (pI)

44.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 514
AccB1I GGYRCC 2 cut(s) 132, 310
AccI GTMKAC 1 cut(s) 249
AccII CGCG 4 cut(s) 537, 597, 911, 945
AciI CCGC 9 cut(s) 255, 439, 681, 834, 909, 924, 927, 943, 998
AclI AACGTT 1 cut(s) 502
AclWI GGATC 2 cut(s) 215, 753
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 3 cut(s) 168, 635, 649
AfiI CCNNNNNNNGG 1 cut(s) 840
AgsI TTSAA 2 cut(s) 457, 773
AhlI ACTAGT 2 cut(s) 425, 902
AjnI CCWGG 2 cut(s) 79, 414
AluBI AGCT 7 cut(s) 125, 190, 263, 566, 706, 953, 983
AluI AGCT 7 cut(s) 125, 190, 263, 566, 706, 953, 983
Alw26I GTCTC 2 cut(s) 683, 976
AlwI GGATC 2 cut(s) 215, 753
AlwNI CAGNNNCTG 1 cut(s) 956
Ama87I CYCGRG 3 cut(s) 480, 639, 973
AoxI GGCC 4 cut(s) 441, 714, 762, 804
ApaI GGGCCC 1 cut(s) 808
ApeKI GCWGC 6 cut(s) 187, 302, 436, 683, 731, 887
AspLEI GCGC 2 cut(s) 14, 537
AspS9I GGNCC 5 cut(s) 441, 477, 526, 804, 805
AsuHPI GGTGA 4 cut(s) 218, 230, 299, 998
AvaI CYCGRG 3 cut(s) 480, 639, 973
AvaII GGWCC 2 cut(s) 477, 526
AxyI CCTNAGG 1 cut(s) 315
BaeGI GKGCMC 1 cut(s) 808
BanI GGYRCC 2 cut(s) 132, 310
BanII GRGCYC 1 cut(s) 808
BbvCI CCTCAGC 2 cut(s) 306, 657
BbvI GCAGC 6 cut(s) 199, 289, 448, 670, 743, 899
BccI CCATC 5 cut(s) 79, 605, 719, 794, 818
BceAI ACGGC 1 cut(s) 266
BcgI CGANNNNNNTGC 6 cut(s) 131, 165, 620, 654, 876, 910
BciT130I CCWGG 2 cut(s) 81, 416
BcoDI GTCTC 2 cut(s) 683, 976
BcuI ACTAGT 2 cut(s) 425, 902
BfaI CTAG 5 cut(s) 426, 450, 645, 903, 980
BfuAI ACCTGC 1 cut(s) 514
BglII AGATCT 1 cut(s) 96
BisI GCNGC 9 cut(s) 188, 303, 437, 684, 732, 834, 888, 909, 925
BlsI GCNGC 9 cut(s) 189, 304, 438, 685, 733, 835, 889, 910, 926
Bme1390I CCNGG 2 cut(s) 81, 416
Bme18I GGWCC 2 cut(s) 477, 526
BmeT110I CYCGRG 3 cut(s) 480, 639, 973
BmgT120I GGNCC 5 cut(s) 441, 477, 526, 804, 805
BmiI GGNNCC 7 cut(s) 78, 134, 312, 479, 582, 805, 806
BmrFI CCNGG 2 cut(s) 81, 416
BmsI GCATC 2 cut(s) 184, 1030
BplI GAGNNNNNCTC 2 cut(s) 565, 597
Bpu10I CCTNAGC 2 cut(s) 306, 657
BpuEI CTTGAG 1 cut(s) 692
BsaBI GATNNNNATC 2 cut(s) 750, 938
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 6 cut(s) 102, 153, 444, 495, 735, 1044
BsaWI WCCGGW 1 cut(s) 223
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 1 cut(s) 840
Bse21I CCTNAGG 1 cut(s) 315
Bse8I GATNNNNATC 2 cut(s) 750, 938
BseBI CCWGG 2 cut(s) 81, 416
BseDI CCNNGG 6 cut(s) 102, 153, 444, 495, 735, 1044
BseGI GGATG 2 cut(s) 199, 616
BseJI GATNNNNATC 2 cut(s) 750, 938
BseLI CCNNNNNNNGG 1 cut(s) 840
BseMII CTCAG 4 cut(s) 297, 306, 392, 648
BseRI GAGGAG 2 cut(s) 482, 674
BseSI GKGCMC 1 cut(s) 808
BseXI GCAGC 6 cut(s) 199, 289, 448, 670, 743, 899
BsgI GTGCAG 1 cut(s) 750
Bsh1236I CGCG 4 cut(s) 537, 597, 911, 945
BshFI GGCC 4 cut(s) 443, 716, 764, 806
BshNI GGYRCC 2 cut(s) 132, 310
BsiHKCI CYCGRG 3 cut(s) 480, 639, 973
BsiSI CCGG 1 cut(s) 224
BslFI GGGAC 1 cut(s) 7
BslI CCNNNNNNNGG 1 cut(s) 840
BsmAI GTCTC 2 cut(s) 683, 976
BsmBI CGTCTC 2 cut(s) 683, 976
BsmFI GGGAC 1 cut(s) 7
BsmI GAATGC 2 cut(s) 666, 971
BsnI GGCC 4 cut(s) 443, 716, 764, 806
BsoBI CYCGRG 3 cut(s) 480, 639, 973
Bsp120I GGGCCC 1 cut(s) 804
Bsp1286I GDGCHC 1 cut(s) 808
Bsp143I GATC 5 cut(s) 96, 220, 592, 745, 893
BspACI CCGC 9 cut(s) 255, 439, 681, 834, 909, 924, 927, 943, 998
BspANI GGCC 4 cut(s) 443, 716, 764, 806
BspCNI CTCAG 4 cut(s) 298, 307, 393, 649
BspFNI CGCG 4 cut(s) 537, 597, 911, 945
BspHI TCATGA 1 cut(s) 60
BspLI GGNNCC 7 cut(s) 78, 134, 312, 479, 582, 805, 806
BspMI ACCTGC 1 cut(s) 514
BspPI GGATC 2 cut(s) 215, 753
BspT107I GGYRCC 2 cut(s) 132, 310
BssECI CCNNGG 6 cut(s) 102, 153, 444, 495, 735, 1044
BssMI GATC 5 cut(s) 96, 220, 592, 745, 893
BssNAI GTATAC 1 cut(s) 250
BssNI GRCGYC 1 cut(s) 84
BssT1I CCWWGG 3 cut(s) 153, 444, 735
Bst1107I GTATAC 1 cut(s) 250
Bst2UI CCWGG 2 cut(s) 81, 416
Bst4CI ACNGT 2 cut(s) 114, 247
BstACI GRCGYC 1 cut(s) 84
BstC8I GCNNGC 5 cut(s) 160, 441, 838, 876, 1033
BstDEI CTNAG 7 cut(s) 163, 306, 315, 401, 657, 796, 1036
BstDSI CCRYGG 1 cut(s) 102
BstF5I GGATG 2 cut(s) 199, 616
BstFNI CGCG 4 cut(s) 537, 597, 911, 945
BstHHI GCGC 2 cut(s) 14, 537
BstKTI GATC 5 cut(s) 99, 223, 595, 748, 896
BstMAI GTCTC 2 cut(s) 683, 976
BstMBI GATC 5 cut(s) 96, 220, 592, 745, 893
BstMWI GCNNNNNNNGC 5 cut(s) 76, 737, 884, 975, 1004
BstNI CCWGG 2 cut(s) 81, 416
BstSCI CCNGG 2 cut(s) 79, 414
BstSLI GKGCMC 1 cut(s) 808
BstUI CGCG 4 cut(s) 537, 597, 911, 945
BstV1I GCAGC 6 cut(s) 199, 289, 448, 670, 743, 899
BstX2I RGATCY 1 cut(s) 96
BstXI CCANNNNNNTGG 2 cut(s) 284, 742
BstYI RGATCY 1 cut(s) 96
BstZ17I GTATAC 1 cut(s) 250
Bsu36I CCTNAGG 1 cut(s) 315
BsuRI GGCC 4 cut(s) 443, 716, 764, 806
BtgI CCRYGG 1 cut(s) 102
BtgZI GCGATG 2 cut(s) 357, 552
BtsCI GGATG 2 cut(s) 199, 616
BtsI GCAGTG 1 cut(s) 747
BtsIMutI CAGTG 2 cut(s) 747, 960
BveI ACCTGC 1 cut(s) 514
Cac8I GCNNGC 5 cut(s) 160, 441, 838, 876, 1033
CaiI CAGNNNCTG 1 cut(s) 956
CciI TCATGA 1 cut(s) 60
CfoI GCGC 2 cut(s) 14, 537
Cfr13I GGNCC 5 cut(s) 441, 477, 526, 804, 805
CseI GACGC 4 cut(s) 73, 395, 700, 958
Csp6I GTAC 3 cut(s) 167, 634, 648
CviAII CATG 1 cut(s) 61
CviQI GTAC 3 cut(s) 167, 634, 648
DdeI CTNAG 7 cut(s) 163, 306, 315, 401, 657, 796, 1036
DpnI GATC 5 cut(s) 98, 222, 594, 747, 895
DpnII GATC 5 cut(s) 96, 220, 592, 745, 893
EciI GGCGGA 1 cut(s) 1013
Eco130I CCWWGG 3 cut(s) 153, 444, 735
Eco24I GRGCYC 1 cut(s) 808
Eco47I GGWCC 2 cut(s) 477, 526
Eco81I CCTNAGG 1 cut(s) 315
Eco88I CYCGRG 3 cut(s) 480, 639, 973
EcoO109I RGGNCCY 3 cut(s) 477, 804, 805
EcoRII CCWGG 2 cut(s) 79, 414
EcoT14I CCWWGG 3 cut(s) 153, 444, 735
EcoT38I GRGCYC 1 cut(s) 808
ErhI CCWWGG 3 cut(s) 153, 444, 735
Esp3I CGTCTC 2 cut(s) 683, 976
FaeI CATG 1 cut(s) 64
FaiI YATR 4 cut(s) 62, 250, 872, 1013
FalI AAGNNNNNCTT 4 cut(s) 146, 178, 779, 811
FaqI GGGAC 1 cut(s) 7
FatI CATG 1 cut(s) 60
FauI CCCGC 3 cut(s) 248, 432, 920
FblI GTMKAC 1 cut(s) 249
Fnu4HI GCNGC 9 cut(s) 188, 303, 437, 684, 732, 834, 888, 909, 925
FokI GGATG 2 cut(s) 206, 623
FriOI GRGCYC 1 cut(s) 808
Fsp4HI GCNGC 9 cut(s) 188, 303, 437, 684, 732, 834, 888, 909, 925
FspBI CTAG 5 cut(s) 426, 450, 645, 903, 980
GlaI GCGC 2 cut(s) 13, 536
GluI GCNGC 9 cut(s) 188, 303, 437, 684, 732, 834, 888, 909, 925
HaeIII GGCC 4 cut(s) 443, 716, 764, 806
HapII CCGG 1 cut(s) 224
HgaI GACGC 4 cut(s) 73, 395, 700, 958
HhaI GCGC 2 cut(s) 14, 537
Hin1I GRCGYC 1 cut(s) 84
Hin1II CATG 1 cut(s) 64
Hin6I GCGC 2 cut(s) 12, 535
HinP1I GCGC 2 cut(s) 12, 535
HincII GTYRAC 1 cut(s) 865
HindII GTYRAC 1 cut(s) 865
HinfI GANTC 2 cut(s) 295, 407
HpaII CCGG 1 cut(s) 224
HphI GGTGA 4 cut(s) 218, 230, 299, 998
Hpy166II GTNNAC 3 cut(s) 250, 636, 865
Hpy188I TCNGA 3 cut(s) 76, 402, 530
Hpy188III TCNNGA 8 cut(s) 39, 61, 326, 359, 374, 590, 773, 973
Hpy8I GTNNAC 3 cut(s) 250, 636, 865
Hpy99I CGWCG 1 cut(s) 89
HpyAV CCTTC 1 cut(s) 661
HpyCH4III ACNGT 2 cut(s) 114, 247
HpyCH4IV ACGT 3 cut(s) 213, 502, 676
HpyCH4V TGCA 6 cut(s) 4, 436, 666, 731, 874, 1057
HpyF10VI GCNNNNNNNGC 5 cut(s) 76, 737, 884, 975, 1004
HpyF3I CTNAG 7 cut(s) 163, 306, 315, 401, 657, 796, 1036
HpySE526I ACGT 3 cut(s) 213, 502, 676
Hsp92I GRCGYC 1 cut(s) 84
Hsp92II CATG 1 cut(s) 64
HspAI GCGC 2 cut(s) 12, 535
Kzo9I GATC 5 cut(s) 96, 220, 592, 745, 893
LmnI GCTCC 4 cut(s) 49, 76, 184, 586
Lsp1109I GCAGC 6 cut(s) 199, 289, 448, 670, 743, 899
LweI GCATC 2 cut(s) 184, 1030
MaeI CTAG 5 cut(s) 426, 450, 645, 903, 980
MaeII ACGT 3 cut(s) 213, 502, 676
MaeIII GTNAC 2 cut(s) 268, 428
MalI GATC 5 cut(s) 98, 222, 594, 747, 895
MboI GATC 5 cut(s) 96, 220, 592, 745, 893
MboII GAAGA 3 cut(s) 27, 746, 790
MflI RGATCY 1 cut(s) 96
MhlI GDGCHC 1 cut(s) 808
MluCI AATT 1 cut(s) 783
MlyI GAGTC 1 cut(s) 416
MmeI TCCRAC 5 cut(s) 96, 162, 495, 528, 588
MseI TTAA 1 cut(s) 786
MspA1I CMGCKG 5 cut(s) 190, 255, 439, 683, 836
MspI CCGG 1 cut(s) 224
MspR9I CCNGG 2 cut(s) 81, 416
Mva1269I GAATGC 2 cut(s) 666, 971
MvaI CCWGG 2 cut(s) 81, 416
MvnI CGCG 4 cut(s) 537, 597, 911, 945
MwoI GCNNNNNNNGC 5 cut(s) 76, 737, 884, 975, 1004
NdeII GATC 5 cut(s) 96, 220, 592, 745, 893
NlaIII CATG 1 cut(s) 64
NlaIV GGNNCC 7 cut(s) 78, 134, 312, 479, 582, 805, 806
NmeAIII GCCGAG 2 cut(s) 520, 712
NmuCI GTSAC 1 cut(s) 268
PaeR7I CTCGAG 1 cut(s) 973
PagI TCATGA 1 cut(s) 60
PctI GAATGC 2 cut(s) 666, 971
PfeI GAWTC 1 cut(s) 295
PkrI GCNGC 9 cut(s) 189, 304, 438, 685, 733, 835, 889, 910, 926
PleI GAGTC 1 cut(s) 415
PpsI GAGTC 1 cut(s) 415
PpuMI RGGWCCY 1 cut(s) 477
Psp1406I AACGTT 1 cut(s) 502
Psp5II RGGWCCY 1 cut(s) 477
Psp6I CCWGG 2 cut(s) 79, 414
PspGI CCWGG 2 cut(s) 79, 414
PspN4I GGNNCC 7 cut(s) 78, 134, 312, 479, 582, 805, 806
PspOMI GGGCCC 1 cut(s) 804
PspPI GGNCC 5 cut(s) 441, 477, 526, 804, 805
PspPPI RGGWCCY 1 cut(s) 477
PstNI CAGNNNCTG 1 cut(s) 956
PsuI RGATCY 1 cut(s) 96
PvuII CAGCTG 1 cut(s) 190
RsaI GTAC 3 cut(s) 168, 635, 649
RsaNI GTAC 3 cut(s) 167, 634, 648
SaqAI TTAA 1 cut(s) 786
SatI GCNGC 9 cut(s) 188, 303, 437, 684, 732, 834, 888, 909, 925
Sau3AI GATC 5 cut(s) 96, 220, 592, 745, 893
Sau96I GGNCC 5 cut(s) 441, 477, 526, 804, 805
SchI GAGTC 1 cut(s) 416
ScrFI CCNGG 2 cut(s) 81, 416
SduI GDGCHC 1 cut(s) 808
SfaNI GCATC 2 cut(s) 184, 1030
Sfr274I CTCGAG 1 cut(s) 973
SinI GGWCC 2 cut(s) 477, 526
SlaI CTCGAG 1 cut(s) 973
SmlI CTYRAG 2 cut(s) 707, 973
SmoI CTYRAG 2 cut(s) 707, 973
SpeI ACTAGT 2 cut(s) 425, 902
Sse9I AATT 1 cut(s) 783
SsiI CCGC 9 cut(s) 255, 439, 681, 834, 909, 924, 927, 943, 998
SspMI CTAG 5 cut(s) 426, 450, 645, 903, 980
StyD4I CCNGG 2 cut(s) 79, 414
StyI CCWWGG 3 cut(s) 153, 444, 735
TaaI ACNGT 2 cut(s) 114, 247
TaiI ACGT 3 cut(s) 216, 505, 679
TaqI TCGA 7 cut(s) 87, 373, 543, 670, 815, 974, 1050
TasI AATT 1 cut(s) 783
TatI WGTACW 2 cut(s) 166, 633
TauI GCSGC 3 cut(s) 836, 911, 927
TfiI GAWTC 1 cut(s) 295
Tru1I TTAA 1 cut(s) 786
Tru9I TTAA 1 cut(s) 786
TscAI CASTG 2 cut(s) 747, 967
TseFI GTSAC 1 cut(s) 268
TseI GCWGC 6 cut(s) 187, 302, 436, 683, 731, 887
Tsp45I GTSAC 1 cut(s) 268
TspDTI ATGAA 1 cut(s) 77
TspGWI ACGGA 1 cut(s) 119
TspRI CASTG 2 cut(s) 747, 967
VpaK11BI GGWCC 2 cut(s) 477, 526
XhoI CTCGAG 1 cut(s) 973
XmiI GTMKAC 1 cut(s) 249
XspI CTAG 5 cut(s) 426, 450, 645, 903, 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.