Rroxscaffold_7G00176270

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000075
Physical Location & Seq
Forward (+)
15737051 .. 15737824
774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00176270.1

Sequence Viewer

Length: 570 bp
ATGCCTAGGGGCCGCCGGTGCGAGGTGGGTGAAGTGGGCGAGCGTCTTCAAGTGCATGTTGTTGAGCGTCAATCTCCCGAGACTCGGGAAATGGTAAGGCGGTCCCCCGGGTCTCGGCGGGGAGGGGTGGATCTTGGTGACGCGGCTTGGGCCTCGGAGCCAACGGTGGAGGTGGAGATCTCCGTCGAGGAGTTCTTTGGAGGAAGTGGAGCGGCGTCGAGCTATTCCAGCCCCCGTGCTCGGGCGGTGCAAGATGCATTGTTGGAACAGCTAAATGCGGTCTTTGGCGAGGGCAACACGTGCGCTCGTACGGATGGGGTAGGGTGGAAGAAATGGACTGCCTCGCAGCTGCGTCTCGGGAGTCCTCCGGTCGGTGTTGCCGTCAATACATGTGGTAGCAAGAGGTCTCGGGTTGATGATGCGTCGCTCTTGAGATCTACGAGTGGGGGCTCGCGAGGTTCTCGTGATGAGGTTGCGGGGGTCTCACGCGCACCTTGGGCGAGATTGGAAATGCGATGGTGCCATTCTTCATATGGTTGCACGCACGAGGAACTATCATCGCGACCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

189

Amino Acids

20.4

Weight (kDa)

8.36

Isoelectric Point (pI)

68.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 519
AccBSI CCGCTC 1 cut(s) 212
AccII CGCG 4 cut(s) 143, 454, 489, 562
AciI CCGC 8 cut(s) 13, 100, 118, 143, 212, 245, 278, 476
AclWI GGATC 1 cut(s) 138
AcvI CACGTG 1 cut(s) 300
AcyI GRCGYC 1 cut(s) 215
AfaI GTAC 1 cut(s) 310
AfiI CCNNNNNNNGG 6 cut(s) 22, 84, 114, 240, 241, 371
AflIII ACRYGT 2 cut(s) 297, 389
AgsI TTSAA 1 cut(s) 50
AluBI AGCT 3 cut(s) 222, 271, 349
AluI AGCT 3 cut(s) 222, 271, 349
Alw21I GWGCWC 1 cut(s) 241
Alw26I GTCTC 5 cut(s) 74, 117, 359, 411, 487
AlwI GGATC 1 cut(s) 138
Ama87I CYCGRG 6 cut(s) 77, 84, 107, 240, 356, 408
AoxI GGCC 2 cut(s) 10, 150
ApeKI GCWGC 2 cut(s) 346, 349
AspA2I CCTAGG 1 cut(s) 5
AspLEI GCGC 2 cut(s) 305, 491
AspS9I GGNCC 3 cut(s) 10, 102, 150
AsuC2I CCSGG 2 cut(s) 108, 109
AsuHPI GGTGA 2 cut(s) 41, 149
AvaI CYCGRG 6 cut(s) 77, 84, 107, 240, 356, 408
AvaII GGWCC 1 cut(s) 102
AvrII CCTAGG 1 cut(s) 5
BanI GGYRCC 1 cut(s) 519
BanII GRGCYC 1 cut(s) 452
BauI CACGAG 2 cut(s) 462, 545
BbrPI CACGTG 1 cut(s) 300
BbsI GAAGAC 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 241
BbvI GCAGC 2 cut(s) 336, 358
BccI CCATC 2 cut(s) 308, 510
BceAI ACGGC 1 cut(s) 365
BcnI CCSGG 2 cut(s) 108, 109
BcoDI GTCTC 5 cut(s) 74, 117, 359, 411, 487
BfaI CTAG 1 cut(s) 6
BglII AGATCT 2 cut(s) 177, 434
BisI GCNGC 5 cut(s) 13, 144, 213, 347, 350
BlnI CCTAGG 1 cut(s) 5
BlsI GCNGC 5 cut(s) 14, 145, 214, 348, 351
Bme1390I CCNGG 2 cut(s) 108, 109
Bme18I GGWCC 1 cut(s) 102
BmeT110I CYCGRG 6 cut(s) 77, 84, 107, 240, 356, 408
BmgT120I GGNCC 3 cut(s) 10, 102, 150
BmiI GGNNCC 4 cut(s) 11, 104, 159, 521
BmrFI CCNGG 2 cut(s) 108, 109
BmsI GCATC 2 cut(s) 244, 409
BpiI GAAGAC 1 cut(s) 38
BpuEI CTTGAG 1 cut(s) 451
BpuMI CCSGG 2 cut(s) 108, 109
BsaAI YACGTR 1 cut(s) 300
BsaHI GRCGYC 1 cut(s) 215
BsaI GGTCTC 3 cut(s) 117, 411, 487
BsaJI CCNNGG 5 cut(s) 5, 106, 107, 153, 494
BsaWI WCCGGW 1 cut(s) 367
Bsc4I CCNNNNNNNGG 6 cut(s) 22, 84, 114, 240, 241, 371
Bse118I RCCGGY 1 cut(s) 15
BseDI CCNNGG 5 cut(s) 5, 106, 107, 153, 494
BseGI GGATG 1 cut(s) 319
BseLI CCNNNNNNNGG 6 cut(s) 22, 84, 114, 240, 241, 371
BseRI GAGGAG 1 cut(s) 203
BseXI GCAGC 2 cut(s) 336, 358
Bsh1236I CGCG 4 cut(s) 143, 454, 489, 562
Bsh1285I CGRYCG 2 cut(s) 372, 566
BshFI GGCC 2 cut(s) 12, 152
BshNI GGYRCC 1 cut(s) 519
BsiEI CGRYCG 2 cut(s) 372, 566
BsiHKAI GWGCWC 1 cut(s) 241
BsiHKCI CYCGRG 6 cut(s) 77, 84, 107, 240, 356, 408
BsiSI CCGG 3 cut(s) 16, 108, 368
BsiWI CGTACG 1 cut(s) 308
BslFI GGGAC 1 cut(s) 88
BslI CCNNNNNNNGG 6 cut(s) 22, 84, 114, 240, 241, 371
BsmAI GTCTC 5 cut(s) 74, 117, 359, 411, 487
BsmBI CGTCTC 1 cut(s) 359
BsmFI GGGAC 1 cut(s) 88
BsnI GGCC 2 cut(s) 12, 152
Bso31I GGTCTC 3 cut(s) 117, 411, 487
BsoBI CYCGRG 6 cut(s) 77, 84, 107, 240, 356, 408
Bsp1286I GDGCHC 2 cut(s) 241, 452
Bsp143I GATC 3 cut(s) 130, 177, 434
Bsp68I TCGCGA 2 cut(s) 454, 562
BspACI CCGC 8 cut(s) 13, 100, 118, 143, 212, 245, 278, 476
BspANI GGCC 2 cut(s) 12, 152
BspFNI CGCG 4 cut(s) 143, 454, 489, 562
BspLI GGNNCC 4 cut(s) 11, 104, 159, 521
BspPI GGATC 1 cut(s) 138
BspT107I GGYRCC 1 cut(s) 519
BspTNI GGTCTC 3 cut(s) 117, 411, 487
BsrBI CCGCTC 1 cut(s) 212
BsrFI RCCGGY 1 cut(s) 15
BssAI RCCGGY 1 cut(s) 15
BssECI CCNNGG 5 cut(s) 5, 106, 107, 153, 494
BssMI GATC 3 cut(s) 130, 177, 434
BssNI GRCGYC 1 cut(s) 215
BssSI CACGAG 2 cut(s) 462, 545
BssT1I CCWWGG 2 cut(s) 5, 494
Bst2BI CACGAG 2 cut(s) 462, 545
Bst4CI ACNGT 2 cut(s) 166, 567
BstACI GRCGYC 1 cut(s) 215
BstAPI GCANNNNNTGC 1 cut(s) 300
BstBAI YACGTR 1 cut(s) 300
BstC8I GCNNGC 3 cut(s) 41, 452, 542
BstF5I GGATG 1 cut(s) 319
BstFNI CGCG 4 cut(s) 143, 454, 489, 562
BstHHI GCGC 2 cut(s) 305, 491
BstKTI GATC 3 cut(s) 133, 180, 437
BstMAI GTCTC 5 cut(s) 74, 117, 359, 411, 487
BstMBI GATC 3 cut(s) 130, 177, 434
BstMCI CGRYCG 2 cut(s) 372, 566
BstMWI GCNNNNNNNGC 5 cut(s) 18, 149, 228, 300, 497
BstNSI RCATGY 2 cut(s) 59, 393
BstSCI CCNGG 2 cut(s) 106, 107
BstUI CGCG 4 cut(s) 143, 454, 489, 562
BstV1I GCAGC 2 cut(s) 336, 358
BstV2I GAAGAC 1 cut(s) 38
BstX2I RGATCY 3 cut(s) 130, 177, 434
BstYI RGATCY 3 cut(s) 130, 177, 434
BsuRI GGCC 2 cut(s) 12, 152
BtgZI GCGATG 2 cut(s) 529, 543
BtsCI GGATG 1 cut(s) 319
BtuMI TCGCGA 2 cut(s) 454, 562
Cac8I GCNNGC 3 cut(s) 41, 452, 542
CfoI GCGC 2 cut(s) 305, 491
Cfr10I RCCGGY 1 cut(s) 15
Cfr13I GGNCC 3 cut(s) 10, 102, 150
Cfr9I CCCGGG 1 cut(s) 107
CseI GACGC 6 cut(s) 32, 56, 149, 204, 341, 411
Csp6I GTAC 1 cut(s) 309
CspCI CAANNNNNGTGG 2 cut(s) 373, 408
CviAII CATG 2 cut(s) 56, 390
CviJI RGCY 9 cut(s) 12, 146, 152, 160, 222, 231, 271, 349, 450
CviKI_1 RGCY 9 cut(s) 12, 146, 152, 160, 222, 231, 271, 349, 450
CviQI GTAC 1 cut(s) 309
DpnI GATC 3 cut(s) 132, 179, 436
DpnII GATC 3 cut(s) 130, 177, 434
Eco130I CCWWGG 2 cut(s) 5, 494
Eco24I GRGCYC 1 cut(s) 452
Eco31I GGTCTC 3 cut(s) 117, 411, 487
Eco47I GGWCC 1 cut(s) 102
Eco72I CACGTG 1 cut(s) 300
Eco88I CYCGRG 6 cut(s) 77, 84, 107, 240, 356, 408
EcoT14I CCWWGG 2 cut(s) 5, 494
EcoT22I ATGCAT 1 cut(s) 259
EcoT38I GRGCYC 1 cut(s) 452
ErhI CCWWGG 2 cut(s) 5, 494
Esp3I CGTCTC 1 cut(s) 359
FaeI CATG 2 cut(s) 59, 393
FaiI YATR 4 cut(s) 57, 391, 532, 534
FaqI GGGAC 1 cut(s) 88
FatI CATG 2 cut(s) 55, 389
FauI CCCGC 2 cut(s) 111, 469
FauNDI CATATG 1 cut(s) 532
Fnu4HI GCNGC 5 cut(s) 13, 144, 213, 347, 350
FokI GGATG 1 cut(s) 326
FriOI GRGCYC 1 cut(s) 452
Fsp4HI GCNGC 5 cut(s) 13, 144, 213, 347, 350
FspBI CTAG 1 cut(s) 6
GlaI GCGC 2 cut(s) 304, 490
GluI GCNGC 5 cut(s) 13, 144, 213, 347, 350
HaeIII GGCC 2 cut(s) 12, 152
HapII CCGG 3 cut(s) 16, 108, 368
HgaI GACGC 6 cut(s) 32, 56, 149, 204, 341, 411
HhaI GCGC 2 cut(s) 305, 491
Hin1I GRCGYC 1 cut(s) 215
Hin1II CATG 2 cut(s) 59, 393
Hin6I GCGC 2 cut(s) 303, 489
HinP1I GCGC 2 cut(s) 303, 489
HinfI GANTC 2 cut(s) 82, 361
HpaII CCGG 3 cut(s) 16, 108, 368
HphI GGTGA 2 cut(s) 41, 149
Hpy188I TCNGA 1 cut(s) 157
Hpy188III TCNNGA 7 cut(s) 77, 86, 358, 430, 453, 464, 561
Hpy99I CGWCG 3 cut(s) 188, 220, 427
HpyCH4III ACNGT 2 cut(s) 166, 567
HpyCH4IV ACGT 1 cut(s) 299
HpyCH4V TGCA 4 cut(s) 55, 250, 257, 540
HpyF10VI GCNNNNNNNGC 5 cut(s) 18, 149, 228, 300, 497
HpySE526I ACGT 1 cut(s) 299
Hsp92I GRCGYC 1 cut(s) 215
Hsp92II CATG 2 cut(s) 59, 393
HspAI GCGC 2 cut(s) 303, 489
Kzo9I GATC 3 cut(s) 130, 177, 434
LmnI GCTCC 2 cut(s) 157, 209
LpnPI CCDG 4 cut(s) 29, 121, 241, 381
Lsp1109I GCAGC 2 cut(s) 336, 358
LweI GCATC 2 cut(s) 244, 409
MaeI CTAG 1 cut(s) 6
MaeII ACGT 1 cut(s) 299
MaeIII GTNAC 1 cut(s) 137
MalI GATC 3 cut(s) 132, 179, 436
MbiI CCGCTC 1 cut(s) 212
MboI GATC 3 cut(s) 130, 177, 434
MboII GAAGA 3 cut(s) 38, 340, 519
MflI RGATCY 3 cut(s) 130, 177, 434
MhlI GDGCHC 2 cut(s) 241, 452
MlyI GAGTC 2 cut(s) 76, 370
MmeI TCCRAC 1 cut(s) 243
Mph1103I ATGCAT 1 cut(s) 259
MspA1I CMGCKG 1 cut(s) 349
MspI CCGG 3 cut(s) 16, 108, 368
MspR9I CCNGG 2 cut(s) 108, 109
MvnI CGCG 4 cut(s) 143, 454, 489, 562
MwoI GCNNNNNNNGC 5 cut(s) 18, 149, 228, 300, 497
NciI CCSGG 2 cut(s) 108, 109
NdeI CATATG 1 cut(s) 532
NdeII GATC 3 cut(s) 130, 177, 434
NlaIII CATG 2 cut(s) 59, 393
NlaIV GGNNCC 4 cut(s) 11, 104, 159, 521
NmeAIII GCCGAG 1 cut(s) 94
NmuCI GTSAC 1 cut(s) 137
NruI TCGCGA 2 cut(s) 454, 562
NsiI ATGCAT 1 cut(s) 259
NspI RCATGY 2 cut(s) 59, 393
PciI ACATGT 1 cut(s) 389
PcsI WCGNNNNNNNCGW 1 cut(s) 378
Pfl23II CGTACG 1 cut(s) 308
PkrI GCNGC 5 cut(s) 14, 145, 214, 348, 351
PleI GAGTC 2 cut(s) 76, 369
PmaCI CACGTG 1 cut(s) 300
PmlI CACGTG 1 cut(s) 300
PpsI GAGTC 2 cut(s) 76, 369
Ppu21I YACGTR 1 cut(s) 300
PscI ACATGT 1 cut(s) 389
PspCI CACGTG 1 cut(s) 300
PspLI CGTACG 1 cut(s) 308
PspN4I GGNNCC 4 cut(s) 11, 104, 159, 521
PspPI GGNCC 3 cut(s) 10, 102, 150
PsuI RGATCY 3 cut(s) 130, 177, 434
PvuII CAGCTG 1 cut(s) 349
RruI TCGCGA 2 cut(s) 454, 562
RsaI GTAC 1 cut(s) 310
RsaNI GTAC 1 cut(s) 309
SatI GCNGC 5 cut(s) 13, 144, 213, 347, 350
Sau3AI GATC 3 cut(s) 130, 177, 434
Sau96I GGNCC 3 cut(s) 10, 102, 150
SchI GAGTC 2 cut(s) 76, 370
ScrFI CCNGG 2 cut(s) 108, 109
SduI GDGCHC 2 cut(s) 241, 452
SfaNI GCATC 2 cut(s) 244, 409
SgrAI CRCCGGYG 1 cut(s) 15
SinI GGWCC 1 cut(s) 102
SmaI CCCGGG 1 cut(s) 109
SmlI CTYRAG 1 cut(s) 430
SmoI CTYRAG 1 cut(s) 430
SsiI CCGC 8 cut(s) 13, 100, 118, 143, 212, 245, 278, 476
SspMI CTAG 1 cut(s) 6
StyD4I CCNGG 2 cut(s) 106, 107
StyI CCWWGG 2 cut(s) 5, 494
TaaI ACNGT 2 cut(s) 166, 567
TaiI ACGT 1 cut(s) 302
TaqI TCGA 2 cut(s) 186, 218
TauI GCSGC 3 cut(s) 15, 146, 215
TseFI GTSAC 1 cut(s) 137
TseI GCWGC 2 cut(s) 346, 349
Tsp45I GTSAC 1 cut(s) 137
TspDTI ATGAA 1 cut(s) 519
TspGWI ACGGA 2 cut(s) 172, 326
TspMI CCCGGG 1 cut(s) 107
VpaK11BI GGWCC 1 cut(s) 102
XceI RCATGY 2 cut(s) 59, 393
XcmI CCANNNNNNNNNTGG 1 cut(s) 530
XmaI CCCGGG 1 cut(s) 107
XmaJI CCTAGG 1 cut(s) 5
XspI CTAG 1 cut(s) 6
Zsp2I ATGCAT 1 cut(s) 259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.