Rmu_sc0001205.1_g000008

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001205.1
OG0000075
Physical Location & Seq
Forward (+)
22953 .. 26250
3298 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001205.1_g000008.1.cds

Sequence Viewer

Length: 1482 bp
atgaaggaatcaaacctggatcttactgggaagctgcaatggacaaaggatggtctaagattggtcgatcaagtcagggcctgggtccgagaactcgatgtcgagttggagcttcgtgcggctgccttggagagtttggcgccctaccccgataatgtggtggatttggaggggcaggttggtaatctgcaaagggaggttgaccgtctacgggatgttgagcttgaagcaggcagagatggaatggctcaggaaggagacaagctccgcaaggccagtctggatggggcagataagattgtggatctctatctccgatcaagccatttccgagagaagatgaacaaagccttctcggatggggttttgcactcgattagggatggtatcgctgccgggtggattgaccaagagaagatagtgtgtgacatgcaggccaagaaggcagcgagatcgcaggccagtgcagctgtttctggtggctttctccgggtacctcacacagaatgctgtaccgtctggggtaccgatcaaacttctaaatccagtatcaagaacacgacgttagagggggaatctcccctatccttgatgtgggacacaggttcttttgatgccatatcagccctcttgttgtgtataaatgggttgtgctggccttgccctgggccctgggtgcctggggtggcatcttatgtgaggcccaccatggtgggtcgtgaacccggcccatggcgtagtacctgggagtaccgatggggctcagccgctagtaataaacttagagcgtgcatcaggataagctggcgatctcgaggtgggggtgttgttggagagcgggaggcccttacggatatcaaaggtgaggtacaaggcgagaatgctagagggctagacggagtggaggagcgtgatcgagaagaggagcagacacgtaatgccgagtggtggggtgcgaatgtaggtgtcgtacttcaaggtagcataatcggtgctggaagtgagagcaagtggcgaggcattgacattgggcaactccgtttggcgtggtatcacgtaggcaataaggtgggatttctatacagtgtgcccttgcctactatgtgttatggtggccatcggaaggcctatggagataatgacgggagaaatgtgaccgagcatggaggcaagcttggaacccctgccctacttggggtagtattagagatgctgggcgttccacagatgtgggaggatgatgccatctgctcccctcaagtagaaggtagcgggtctgatagcctcgatgattttgtacggcccttcccatgtggccttgagccctgttggggttggcgtcttttccttcatcactcaatcccctacagagaggaggcgaggcaagactctggagttataatagcgagcgatacgctgcttgtttttaatattcctgaggtgggcccgttcgaggtcggagtcgaggttcaacccttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

493

Amino Acids

54.32

Weight (kDa)

5.09

Isoelectric Point (pI)

33.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1400
Acc36I ACCTGC 1 cut(s) 166
Acc65I GGTACC 2 cut(s) 493, 524
AccB1I GGYRCC 4 cut(s) 139, 493, 524, 676
AccBSI CCGCTC 1 cut(s) 838
AccI GTMKAC 1 cut(s) 208
AciI CCGC 5 cut(s) 119, 268, 768, 838, 1272
AclWI GGATC 2 cut(s) 27, 312
AcoI YGGCCR 1 cut(s) 1114
AcyI GRCGYC 2 cut(s) 140, 1339
AfaI GTAC 8 cut(s) 495, 514, 526, 742, 752, 870, 972, 1299
AflIII ACRYGT 1 cut(s) 932
AgsI TTSAA 3 cut(s) 227, 977, 1472
AjnI CCWGG 6 cut(s) 15, 80, 664, 671, 679, 743
AleI CACNNNNGTG 2 cut(s) 710, 1228
AloI GAACNNNNNNTCC 1 cut(s) 1452
AluBI AGCT 7 cut(s) 34, 112, 223, 265, 470, 804, 1174
AluI AGCT 7 cut(s) 34, 112, 223, 265, 470, 804, 1174
Alw26I GTCTC 1 cut(s) 252
AlwI GGATC 2 cut(s) 27, 312
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 813
ApaI GGGCCC 2 cut(s) 672, 1448
ApeKI GCWGC 6 cut(s) 34, 122, 392, 446, 467, 1417
Asp718I GGTACC 2 cut(s) 493, 524
AspLEI GCGC 1 cut(s) 142
AsuC2I CCSGG 3 cut(s) 397, 491, 726
AsuHPI GGTGA 1 cut(s) 875
AvaI CYCGRG 1 cut(s) 813
AvaII GGWCC 1 cut(s) 85
AxyI CCTNAGG 1 cut(s) 1437
BaeGI GKGCMC 3 cut(s) 672, 1092, 1448
BalI TGGCCA 1 cut(s) 1116
BanI GGYRCC 4 cut(s) 139, 493, 524, 676
BanII GRGCYC 4 cut(s) 672, 764, 1326, 1448
BbvI GCAGC 6 cut(s) 21, 109, 379, 458, 479, 1404
BccI CCATC 8 cut(s) 44, 233, 278, 353, 377, 750, 1125, 1253
BceAI ACGGC 1 cut(s) 1316
BcgI CGANNNNNNTGC 2 cut(s) 435, 469
BciT130I CCWGG 6 cut(s) 17, 82, 666, 673, 681, 745
BcnI CCSGG 3 cut(s) 397, 491, 726
BcoDI GTCTC 1 cut(s) 252
BfaI CTAG 3 cut(s) 771, 885, 893
BfmI CTRYAG 1 cut(s) 1366
BfoI RGCGCY 1 cut(s) 143
BfuAI ACCTGC 1 cut(s) 166
BglI GCCNNNNNGGC 1 cut(s) 443
BisI GCNGC 8 cut(s) 35, 120, 123, 393, 447, 468, 768, 1418
BlpI GCTNAGC 1 cut(s) 763
BlsI GCNGC 8 cut(s) 36, 121, 124, 394, 448, 469, 769, 1419
Bme1390I CCNGG 9 cut(s) 17, 82, 397, 491, 666, 673, 681, 726, 745
Bme18I GGWCC 1 cut(s) 85
BmeT110I CYCGRG 1 cut(s) 813
BmiI GGNNCC 8 cut(s) 86, 141, 495, 526, 670, 678, 1180, 1446
BmrFI CCNGG 9 cut(s) 17, 82, 397, 491, 666, 673, 681, 726, 745
BmrI ACTGGG 1 cut(s) 36
BmsI GCATC 5 cut(s) 604, 698, 801, 1200, 1231
BmuI ACTGGG 1 cut(s) 36
BplI GAGNNNNNCTC 2 cut(s) 249, 281
BpmI CTGGAG 1 cut(s) 1413
Bpu10I CCTNAGC 1 cut(s) 249
Bpu1102I GCTNAGC 1 cut(s) 763
BpuEI CTTGAG 2 cut(s) 1242, 1340
BpuMI CCSGG 3 cut(s) 397, 491, 726
BsaAI YACGTR 2 cut(s) 935, 1057
BsaBI GATNNNNATC 1 cut(s) 309
BsaHI GRCGYC 2 cut(s) 140, 1339
BsaXI ACNNNNNCTCC 2 cut(s) 1452, 1482
Bse1I ACTGG 4 cut(s) 31, 276, 462, 546
Bse21I CCTNAGG 1 cut(s) 1437
Bse3DI GCAATG 1 cut(s) 44
Bse8I GATNNNNATC 1 cut(s) 309
BseBI CCWGG 6 cut(s) 17, 82, 666, 673, 681, 745
BseGI GGATG 6 cut(s) 55, 220, 289, 364, 388, 1243
BseJI GATNNNNATC 1 cut(s) 309
BseMI GCAATG 1 cut(s) 44
BseMII CTCAG 3 cut(s) 263, 777, 1428
BseNI ACTGG 4 cut(s) 31, 276, 462, 546
BseRI GAGGAG 3 cut(s) 920, 938, 1388
BseSI GKGCMC 3 cut(s) 672, 1092, 1448
BseXI GCAGC 6 cut(s) 21, 109, 379, 458, 479, 1404
BseYI CCCAGC 1 cut(s) 1213
BsgI GTGCAG 1 cut(s) 486
BshNI GGYRCC 4 cut(s) 139, 493, 524, 676
BsiHKCI CYCGRG 1 cut(s) 813
BsiSI CCGG 3 cut(s) 396, 490, 726
BslFI GGGAC 1 cut(s) 611
BsmAI GTCTC 1 cut(s) 252
BsmFI GGGAC 1 cut(s) 611
BsmI GAATGC 2 cut(s) 512, 886
BsoBI CYCGRG 1 cut(s) 813
Bsp120I GGGCCC 2 cut(s) 668, 1444
Bsp1286I GDGCHC 5 cut(s) 672, 764, 1092, 1326, 1448
Bsp143I GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
Bsp1720I GCTNAGC 1 cut(s) 763
Bsp19I CCATGG 2 cut(s) 708, 731
BspACI CCGC 5 cut(s) 119, 268, 768, 838, 1272
BspCNI CTCAG 3 cut(s) 262, 776, 1429
BspLI GGNNCC 8 cut(s) 86, 141, 495, 526, 670, 678, 1180, 1446
BspMI ACCTGC 1 cut(s) 166
BspPI GGATC 2 cut(s) 27, 312
BspT107I GGYRCC 4 cut(s) 139, 493, 524, 676
BsrBI CCGCTC 1 cut(s) 838
BsrDI GCAATG 1 cut(s) 44
BsrI ACTGG 4 cut(s) 31, 276, 462, 546
BssMI GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
BssNI GRCGYC 2 cut(s) 140, 1339
BssT1I CCWWGG 3 cut(s) 126, 708, 731
Bst2UI CCWGG 6 cut(s) 17, 82, 666, 673, 681, 745
Bst4CI ACNGT 3 cut(s) 206, 517, 1085
Bst6I CTCTTC 1 cut(s) 915
BstACI GRCGYC 2 cut(s) 140, 1339
BstBAI YACGTR 2 cut(s) 935, 1057
BstC8I GCNNGC 8 cut(s) 232, 435, 459, 656, 790, 806, 1172, 1408
BstDEI CTNAG 5 cut(s) 56, 249, 763, 782, 1437
BstDSI CCRYGG 2 cut(s) 708, 731
BstF5I GGATG 6 cut(s) 55, 220, 289, 364, 388, 1243
BstH2I RGCGCY 1 cut(s) 143
BstHHI GCGC 1 cut(s) 142
BstKTI GATC 8 cut(s) 22, 70, 307, 320, 455, 532, 812, 916
BstMAI GTCTC 1 cut(s) 252
BstMBI GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
BstMWI GCNNNNNNNGC 5 cut(s) 443, 467, 623, 660, 676
BstNI CCWGG 6 cut(s) 17, 82, 666, 673, 681, 745
BstNSI RCATGY 1 cut(s) 433
BstSCI CCNGG 9 cut(s) 15, 80, 395, 489, 664, 671, 679, 724, 743
BstSFI CTRYAG 1 cut(s) 1366
BstSLI GKGCMC 3 cut(s) 672, 1092, 1448
BstV1I GCAGC 6 cut(s) 21, 109, 379, 458, 479, 1404
BstX2I RGATCY 2 cut(s) 19, 304
BstXI CCANNNNNNTGG 2 cut(s) 712, 1230
BstYI RGATCY 2 cut(s) 19, 304
Bsu36I CCTNAGG 1 cut(s) 1437
BtgI CCRYGG 2 cut(s) 708, 731
BtsCI GGATG 6 cut(s) 55, 220, 289, 364, 388, 1243
BtsIMutI CAGTG 2 cut(s) 469, 1090
BveI ACCTGC 1 cut(s) 166
Cac8I GCNNGC 8 cut(s) 232, 435, 459, 656, 790, 806, 1172, 1408
CaiI CAGNNNCTG 1 cut(s) 81
CfoI GCGC 1 cut(s) 142
CseI GACGC 1 cut(s) 1328
Csp6I GTAC 8 cut(s) 494, 513, 525, 741, 751, 869, 971, 1298
CviAII CATG 5 cut(s) 430, 709, 732, 1163, 1311
CviQI GTAC 8 cut(s) 494, 513, 525, 741, 751, 869, 971, 1298
DdeI CTNAG 5 cut(s) 56, 249, 763, 782, 1437
DinI GGCGCC 1 cut(s) 141
DpnI GATC 8 cut(s) 21, 69, 306, 319, 454, 531, 811, 915
DpnII GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
EaeI YGGCCR 1 cut(s) 1114
Eam1104I CTCTTC 1 cut(s) 915
EarI CTCTTC 1 cut(s) 915
Eco130I CCWWGG 3 cut(s) 126, 708, 731
Eco147I AGGCCT 1 cut(s) 1127
Eco24I GRGCYC 4 cut(s) 672, 764, 1326, 1448
Eco32I GATATC 1 cut(s) 856
Eco47I GGWCC 1 cut(s) 85
Eco81I CCTNAGG 1 cut(s) 1437
Eco88I CYCGRG 1 cut(s) 813
EcoO109I RGGNCCY 3 cut(s) 78, 669, 844
EcoRII CCWGG 6 cut(s) 15, 80, 664, 671, 679, 743
EcoRV GATATC 1 cut(s) 856
EcoT14I CCWWGG 3 cut(s) 126, 708, 731
EcoT38I GRGCYC 4 cut(s) 672, 764, 1326, 1448
EgeI GGCGCC 1 cut(s) 141
EheI GGCGCC 1 cut(s) 141
ErhI CCWWGG 3 cut(s) 126, 708, 731
FaeI CATG 5 cut(s) 433, 712, 735, 1166, 1314
FaqI GGGAC 1 cut(s) 611
FatI CATG 5 cut(s) 429, 708, 731, 1162, 1310
FauI CCCGC 2 cut(s) 831, 1265
FblI GTMKAC 1 cut(s) 208
Fnu4HI GCNGC 8 cut(s) 35, 120, 123, 393, 447, 468, 768, 1418
FokI GGATG 6 cut(s) 62, 227, 296, 371, 395, 1250
FriOI GRGCYC 4 cut(s) 672, 764, 1326, 1448
Fsp4HI GCNGC 8 cut(s) 35, 120, 123, 393, 447, 468, 768, 1418
FspBI CTAG 3 cut(s) 771, 885, 893
GlaI GCGC 1 cut(s) 141
GluI GCNGC 8 cut(s) 35, 120, 123, 393, 447, 468, 768, 1418
GsaI CCCAGC 1 cut(s) 1217
GsuI CTGGAG 1 cut(s) 1413
HaeII RGCGCY 1 cut(s) 143
HapII CCGG 3 cut(s) 396, 490, 726
HgaI GACGC 1 cut(s) 1328
HhaI GCGC 1 cut(s) 142
Hin1I GRCGYC 2 cut(s) 140, 1339
Hin1II CATG 5 cut(s) 433, 712, 735, 1166, 1314
Hin6I GCGC 1 cut(s) 140
HinP1I GCGC 1 cut(s) 140
HincII GTYRAC 1 cut(s) 202
HindII GTYRAC 1 cut(s) 202
HindIII AAGCTT 1 cut(s) 1172
HinfI GANTC 4 cut(s) 8, 575, 1388, 1461
HpaII CCGG 3 cut(s) 396, 490, 726
HphI GGTGA 1 cut(s) 875
Hpy166II GTNNAC 3 cut(s) 202, 209, 722
Hpy188I TCNGA 7 cut(s) 89, 317, 332, 358, 1122, 1279, 1460
Hpy188III TCNNGA 9 cut(s) 251, 281, 553, 719, 796, 813, 917, 1392, 1436
Hpy8I GTNNAC 3 cut(s) 202, 209, 722
Hpy99I CGWCG 1 cut(s) 565
HpyAV CCTTC 7 cut(s) 248, 361, 436, 1117, 1259, 1315, 1358
HpyCH4III ACNGT 3 cut(s) 206, 517, 1085
HpyCH4IV ACGT 3 cut(s) 563, 934, 1056
HpyCH4V TGCA 6 cut(s) 37, 190, 370, 433, 467, 792
HpyF10VI GCNNNNNNNGC 5 cut(s) 443, 467, 623, 660, 676
HpyF3I CTNAG 5 cut(s) 56, 249, 763, 782, 1437
HpySE526I ACGT 3 cut(s) 563, 934, 1056
Hsp92I GRCGYC 2 cut(s) 140, 1339
Hsp92II CATG 5 cut(s) 433, 712, 735, 1166, 1314
HspAI GCGC 1 cut(s) 140
KasI GGCGCC 1 cut(s) 139
KpnI GGTACC 2 cut(s) 497, 528
Kzo9I GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
LmnI GCTCC 5 cut(s) 109, 270, 907, 925, 1256
Lsp1109I GCAGC 6 cut(s) 21, 109, 379, 458, 479, 1404
LweI GCATC 5 cut(s) 604, 698, 801, 1200, 1231
MaeI CTAG 3 cut(s) 771, 885, 893
MaeII ACGT 3 cut(s) 563, 934, 1056
MaeIII GTNAC 2 cut(s) 425, 1153
MalI GATC 8 cut(s) 21, 69, 306, 319, 454, 531, 811, 915
MbiI CCGCTC 1 cut(s) 838
MboI GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
MboII GAAGA 3 cut(s) 349, 427, 932
MflI RGATCY 2 cut(s) 19, 304
MhlI GDGCHC 5 cut(s) 672, 764, 1092, 1326, 1448
MlsI TGGCCA 1 cut(s) 1116
MluNI TGGCCA 1 cut(s) 1116
Mly113I GGCGCC 1 cut(s) 140
MlyI GAGTC 2 cut(s) 1382, 1470
MmeI TCCRAC 3 cut(s) 87, 811, 1438
Mox20I TGGCCA 1 cut(s) 1116
MscI TGGCCA 1 cut(s) 1116
MseI TTAA 1 cut(s) 1428
MslI CAYNNNNRTG 2 cut(s) 710, 1228
Msp20I TGGCCA 1 cut(s) 1116
MspA1I CMGCKG 1 cut(s) 470
MspI CCGG 3 cut(s) 396, 490, 726
MspR9I CCNGG 9 cut(s) 17, 82, 397, 491, 666, 673, 681, 726, 745
Mva1269I GAATGC 2 cut(s) 512, 886
MvaI CCWGG 6 cut(s) 17, 82, 666, 673, 681, 745
MwoI GCNNNNNNNGC 5 cut(s) 443, 467, 623, 660, 676
NarI GGCGCC 1 cut(s) 140
NciI CCSGG 3 cut(s) 397, 491, 726
NcoI CCATGG 2 cut(s) 708, 731
NdeII GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
NlaIII CATG 5 cut(s) 433, 712, 735, 1166, 1314
NlaIV GGNNCC 8 cut(s) 86, 141, 495, 526, 670, 678, 1180, 1446
NmeAIII GCCGAG 1 cut(s) 967
NmuCI GTSAC 2 cut(s) 425, 1153
NspI RCATGY 1 cut(s) 433
OliI CACNNNNGTG 2 cut(s) 710, 1228
PaeR7I CTCGAG 1 cut(s) 813
PasI CCCWGGG 2 cut(s) 665, 672
PceI AGGCCT 1 cut(s) 1127
PctI GAATGC 2 cut(s) 512, 886
PfeI GAWTC 2 cut(s) 8, 575
PkrI GCNGC 8 cut(s) 36, 121, 124, 394, 448, 469, 769, 1419
PleI GAGTC 2 cut(s) 1382, 1469
PluTI GGCGCC 1 cut(s) 143
PpsI GAGTC 2 cut(s) 1382, 1469
Ppu21I YACGTR 2 cut(s) 935, 1057
PsiI TTATAA 1 cut(s) 1400
Psp6I CCWGG 6 cut(s) 15, 80, 664, 671, 679, 743
PspFI CCCAGC 1 cut(s) 1213
PspGI CCWGG 6 cut(s) 15, 80, 664, 671, 679, 743
PspN4I GGNNCC 8 cut(s) 86, 141, 495, 526, 670, 678, 1180, 1446
PspOMI GGGCCC 2 cut(s) 668, 1444
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 2 cut(s) 19, 304
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 8 cut(s) 495, 514, 526, 742, 752, 870, 972, 1299
RsaNI GTAC 8 cut(s) 494, 513, 525, 741, 751, 869, 971, 1298
RseI CAYNNNNRTG 2 cut(s) 710, 1228
SaqAI TTAA 1 cut(s) 1428
SatI GCNGC 8 cut(s) 35, 120, 123, 393, 447, 468, 768, 1418
Sau3AI GATC 8 cut(s) 19, 67, 304, 317, 452, 529, 809, 913
SchI GAGTC 2 cut(s) 1382, 1470
ScrFI CCNGG 9 cut(s) 17, 82, 397, 491, 666, 673, 681, 726, 745
SduI GDGCHC 5 cut(s) 672, 764, 1092, 1326, 1448
SfaNI GCATC 5 cut(s) 604, 698, 801, 1200, 1231
SfcI CTRYAG 1 cut(s) 1366
SfoI GGCGCC 1 cut(s) 141
Sfr274I CTCGAG 1 cut(s) 813
SinI GGWCC 1 cut(s) 85
SlaI CTCGAG 1 cut(s) 813
SmiMI CAYNNNNRTG 2 cut(s) 710, 1228
SmlI CTYRAG 3 cut(s) 813, 1257, 1319
SmoI CTYRAG 3 cut(s) 813, 1257, 1319
SseBI AGGCCT 1 cut(s) 1127
SsiI CCGC 5 cut(s) 119, 268, 768, 838, 1272
SspDI GGCGCC 1 cut(s) 139
SspI AATATT 1 cut(s) 1432
SspMI CTAG 3 cut(s) 771, 885, 893
StuI AGGCCT 1 cut(s) 1127
StyD4I CCNGG 9 cut(s) 15, 80, 395, 489, 664, 671, 679, 724, 743
StyI CCWWGG 3 cut(s) 126, 708, 731
TaaI ACNGT 3 cut(s) 206, 517, 1085
TaiI ACGT 3 cut(s) 566, 937, 1059
TaqI TCGA 9 cut(s) 66, 96, 102, 374, 814, 916, 1287, 1452, 1464
TaqII GACCGA 1 cut(s) 1172
TauI GCSGC 2 cut(s) 122, 770
TfiI GAWTC 2 cut(s) 8, 575
Tru1I TTAA 1 cut(s) 1428
Tru9I TTAA 1 cut(s) 1428
TscAI CASTG 2 cut(s) 469, 1090
TseFI GTSAC 2 cut(s) 425, 1153
TseI GCWGC 6 cut(s) 34, 122, 392, 446, 467, 1417
Tsp45I GTSAC 2 cut(s) 425, 1153
TspDTI ATGAA 3 cut(s) 17, 356, 1340
TspGWI ACGGA 3 cut(s) 866, 912, 1028
TspRI CASTG 2 cut(s) 469, 1090
VpaK11BI GGWCC 1 cut(s) 85
XceI RCATGY 1 cut(s) 433
XhoI CTCGAG 1 cut(s) 813
XmiI GTMKAC 1 cut(s) 208
XspI CTAG 3 cut(s) 771, 885, 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.