Rmu_sc0001190.1_g000051

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001190.1
OG0000075
Physical Location & Seq
Reverse (-)
170215 .. 172188
1974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001190.1_g000051.1.cds

Sequence Viewer

Length: 1197 bp
atgcttggcaaatgctcatgtaagtacaatgtgtttggtgaatttcattctgccattggtgtgctaacagcaggtctttgtatggtagtgaggcaggagaccaccctgactatgctagagcagaagcgtgtggcgagggtgcgagcgagttcccccgaggagcaaaggtgttctatagcctatgtaggatcccgatatacgagagcggatatgcctaccgaagctgctaacaagagtgatgccccatatgcggaggtggataccgacgttatcatcagggagttgctgcgagaatcggagacggaaaggcgagttgacgtcgatcttcttgataaagtatgtgtgaccgatcatcgggtgaacatgctgctacccgatgatatgaacttgaggtttcccgataccgtgttggaatatctcaaccaacaagctgaggagcaggcgggtgttgaggggcaattgggtcagggccaccccgagccagttgttgaggaaactactcagtctcgggagtgggcgggcgaggctggtcagttctcccaatggagatatcgggctccgacatcccgggatgttatcactgttgatagtggcgaggctgaggtgactagccaagctgttggtgacgccgttcctgtagttaaagttactaaagcacagcctgaggtcgagggggttgaggaggttgatgttgggggtacgcaggttgttgagaccgagacccatgcccaggtcggcgaggtggccggacccgagtctacaagtgggggctcgcatggttctcgcgataaggttgccgattgtctcgtgagtacgctgggcaagattagggtcattgatggtaccattctccatatggttgctgacctgcgaaattgtcatcgtgatcgttgtcatgtgacagctgaggatcctcgcctggggtatcgagaagtggaggagaggctgatgagggaggcggaggatgctatcgttcctctgagggagtccaacttagatctgacttggaaactacagcgggcggaggatggcctgaaggctttggatcaggttagggcccgggttggagaggctgatgagcgtttgcgagagctagagacacaggtccaggagtgtgataccgagttggagcttcgcaatgcaactttggcgagtttggccccataccctgatcgtgtgttagagttggagggatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

398

Amino Acids

44.16

Weight (kDa)

4.69

Isoelectric Point (pI)

35.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 321
Acc36I ACCTGC 3 cut(s) 62, 694, 876
Acc65I GGTACC 1 cut(s) 842
AccB1I GGYRCC 1 cut(s) 842
AccBSI CCGCTC 1 cut(s) 206
AccI GTMKAC 1 cut(s) 758
AccII CGCG 1 cut(s) 786
AciI CCGC 7 cut(s) 206, 251, 443, 518, 959, 1018, 1022
AclWI GGATC 5 cut(s) 183, 196, 905, 918, 1053
AcoI YGGCCR 1 cut(s) 744
AcsI RAATTY 1 cut(s) 41
AcuI CTGAAG 1 cut(s) 1055
AcyI GRCGYC 2 cut(s) 318, 627
AfaI GTAC 4 cut(s) 26, 700, 814, 844
AfiI CCNNNNNNNGG 4 cut(s) 250, 354, 730, 920
AjnI CCWGG 3 cut(s) 729, 918, 1107
AluBI AGCT 6 cut(s) 224, 431, 617, 905, 1093, 1132
AluI AGCT 6 cut(s) 224, 431, 617, 905, 1093, 1132
Alw26I GTCTC 7 cut(s) 92, 293, 510, 707, 713, 809, 1091
AlwI GGATC 5 cut(s) 183, 196, 905, 918, 1053
Ama87I CYCGRG 6 cut(s) 155, 476, 507, 567, 752, 1059
AoxI GGCC 5 cut(s) 469, 744, 1030, 1056, 1158
ApaI GGGCCC 1 cut(s) 1060
ApeKI GCWGC 3 cut(s) 224, 286, 367
ApoI RAATTY 1 cut(s) 41
Asp718I GGTACC 1 cut(s) 842
AspS9I GGNCC 6 cut(s) 469, 749, 1056, 1057, 1105, 1159
AsuC2I CCSGG 4 cut(s) 568, 569, 1060, 1061
AsuHPI GGTGA 4 cut(s) 50, 370, 616, 635
AvaI CYCGRG 6 cut(s) 155, 476, 507, 567, 752, 1059
AvaII GGWCC 2 cut(s) 749, 1105
AxyI CCTNAGG 1 cut(s) 663
BaeGI GKGCMC 1 cut(s) 1060
BaeI ACNNNNGTAYC 4 cut(s) 252, 285, 690, 723
BamHI GGATCC 2 cut(s) 188, 910
BanI GGYRCC 1 cut(s) 842
BanII GRGCYC 3 cut(s) 559, 773, 1060
BauI CACGAG 1 cut(s) 806
BbvCI CCTCAGC 3 cut(s) 432, 600, 906
BbvI GCAGC 3 cut(s) 211, 273, 354
BccI CCATC 2 cut(s) 833, 1022
BceAI ACGGC 1 cut(s) 614
BcgI CGANNNNNNTGC 6 cut(s) 707, 741, 764, 776, 798, 810
BciT130I CCWGG 3 cut(s) 731, 920, 1109
BciVI GTATCC 1 cut(s) 253
BcnI CCSGG 4 cut(s) 568, 569, 1060, 1061
BcoDI GTCTC 7 cut(s) 92, 293, 510, 707, 713, 809, 1091
BfaI CTAG 3 cut(s) 116, 609, 1094
BfmI CTRYAG 3 cut(s) 174, 636, 1013
BfuAI ACCTGC 3 cut(s) 62, 694, 876
BfuI GTATCC 1 cut(s) 253
BglII AGATCT 1 cut(s) 997
BisI GCNGC 3 cut(s) 225, 287, 368
BlsI GCNGC 3 cut(s) 226, 288, 369
Bme1390I CCNGG 7 cut(s) 568, 569, 731, 920, 1060, 1061, 1109
Bme18I GGWCC 2 cut(s) 749, 1105
BmeT110I CYCGRG 6 cut(s) 155, 476, 507, 567, 752, 1059
BmgT120I GGNCC 6 cut(s) 469, 749, 1056, 1057, 1105, 1159
BmiI GGNNCC 7 cut(s) 190, 558, 751, 844, 912, 1058, 1161
BmrFI CCNGG 7 cut(s) 568, 569, 731, 920, 1060, 1061, 1109
BmsI GCATC 2 cut(s) 229, 955
BoxI GACNNNNGTC 2 cut(s) 754, 1103
Bpu10I CCTNAGC 3 cut(s) 432, 600, 906
BpuEI CTTGAG 1 cut(s) 409
BpuMI CCSGG 4 cut(s) 568, 569, 1060, 1061
BsaHI GRCGYC 2 cut(s) 318, 627
BsaI GGTCTC 3 cut(s) 92, 707, 713
BsaJI CCNNGG 5 cut(s) 156, 567, 729, 919, 1059
BsaXI ACNNNNNCTCC 2 cut(s) 152, 182
Bsc4I CCNNNNNNNGG 4 cut(s) 250, 354, 730, 920
Bse1I ACTGG 1 cut(s) 482
Bse21I CCTNAGG 1 cut(s) 663
Bse3DI GCAATG 1 cut(s) 1144
BseBI CCWGG 3 cut(s) 731, 920, 1109
BseDI CCNNGG 5 cut(s) 156, 567, 729, 919, 1059
BseGI GGATG 4 cut(s) 563, 577, 970, 1033
BseLI CCNNNNNNNGG 4 cut(s) 250, 354, 730, 920
BseMI GCAATG 1 cut(s) 1144
BseMII CTCAG 6 cut(s) 423, 515, 591, 654, 897, 971
BseNI ACTGG 1 cut(s) 482
BseRI GAGGAG 4 cut(s) 173, 449, 695, 953
BseSI GKGCMC 1 cut(s) 1060
BseXI GCAGC 3 cut(s) 211, 273, 354
BseYI CCCAGC 1 cut(s) 817
Bsh1236I CGCG 1 cut(s) 786
BshFI GGCC 5 cut(s) 471, 746, 1032, 1058, 1160
BshNI GGYRCC 1 cut(s) 842
BsiHKCI CYCGRG 6 cut(s) 155, 476, 507, 567, 752, 1059
BsiSI CCGG 3 cut(s) 568, 747, 1060
BslI CCNNNNNNNGG 4 cut(s) 250, 354, 730, 920
BsmAI GTCTC 7 cut(s) 92, 293, 510, 707, 713, 809, 1091
BsmBI CGTCTC 1 cut(s) 293
BsnI GGCC 5 cut(s) 471, 746, 1032, 1058, 1160
Bso31I GGTCTC 3 cut(s) 92, 707, 713
BsoBI CYCGRG 6 cut(s) 155, 476, 507, 567, 752, 1059
Bsp120I GGGCCC 1 cut(s) 1056
Bsp1286I GDGCHC 3 cut(s) 559, 773, 1060
Bsp143I GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
Bsp68I TCGCGA 1 cut(s) 786
BspACI CCGC 7 cut(s) 206, 251, 443, 518, 959, 1018, 1022
BspANI GGCC 5 cut(s) 471, 746, 1032, 1058, 1160
BspCNI CTCAG 6 cut(s) 424, 514, 592, 655, 898, 972
BspFNI CGCG 1 cut(s) 786
BspLI GGNNCC 7 cut(s) 190, 558, 751, 844, 912, 1058, 1161
BspMI ACCTGC 3 cut(s) 62, 694, 876
BspPI GGATC 5 cut(s) 183, 196, 905, 918, 1053
BspT107I GGYRCC 1 cut(s) 842
BspTNI GGTCTC 3 cut(s) 92, 707, 713
BsrBI CCGCTC 1 cut(s) 206
BsrDI GCAATG 1 cut(s) 1144
BsrI ACTGG 1 cut(s) 482
BssECI CCNNGG 5 cut(s) 156, 567, 729, 919, 1059
BssMI GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
BssNI GRCGYC 2 cut(s) 318, 627
BssSI CACGAG 1 cut(s) 806
Bst2BI CACGAG 1 cut(s) 806
Bst2UI CCWGG 3 cut(s) 731, 920, 1109
Bst4CI ACNGT 2 cut(s) 406, 583
BstACI GRCGYC 2 cut(s) 318, 627
BstC8I GCNNGC 5 cut(s) 144, 441, 520, 773, 1020
BstDEI CTNAG 7 cut(s) 432, 501, 600, 663, 906, 980, 994
BstF5I GGATG 4 cut(s) 563, 577, 970, 1033
BstFNI CGCG 1 cut(s) 786
BstKTI GATC 8 cut(s) 191, 325, 352, 889, 913, 1000, 1048, 1174
BstMAI GTCTC 7 cut(s) 92, 293, 510, 707, 713, 809, 1091
BstMBI GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
BstMWI GCNNNNNNNGC 5 cut(s) 248, 524, 965, 1148, 1157
BstNI CCWGG 3 cut(s) 731, 920, 1109
BstNSI RCATGY 1 cut(s) 367
BstPAI GACNNNNGTC 2 cut(s) 754, 1103
BstSCI CCNGG 7 cut(s) 566, 567, 729, 918, 1058, 1059, 1107
BstSFI CTRYAG 3 cut(s) 174, 636, 1013
BstSLI GKGCMC 1 cut(s) 1060
BstUI CGCG 1 cut(s) 786
BstV1I GCAGC 3 cut(s) 211, 273, 354
BstX2I RGATCY 3 cut(s) 188, 910, 997
BstXI CCANNNNNNTGG 1 cut(s) 620
BstYI RGATCY 3 cut(s) 188, 910, 997
Bsu36I CCTNAGG 1 cut(s) 663
BsuI GTATCC 1 cut(s) 253
BsuRI GGCC 5 cut(s) 471, 746, 1032, 1058, 1160
BtsCI GGATG 4 cut(s) 563, 577, 970, 1033
BtsIMutI CAGTG 1 cut(s) 579
BtuMI TCGCGA 1 cut(s) 786
BveI ACCTGC 3 cut(s) 62, 694, 876
Cac8I GCNNGC 5 cut(s) 144, 441, 520, 773, 1020
Cfr13I GGNCC 6 cut(s) 469, 749, 1056, 1057, 1105, 1159
Cfr9I CCCGGG 2 cut(s) 567, 1059
CseI GACGC 1 cut(s) 635
Csp6I GTAC 4 cut(s) 25, 699, 813, 843
CviAII CATG 5 cut(s) 18, 364, 725, 776, 896
CviQI GTAC 4 cut(s) 25, 699, 813, 843
DdeI CTNAG 7 cut(s) 432, 501, 600, 663, 906, 980, 994
DpnI GATC 8 cut(s) 190, 324, 351, 888, 912, 999, 1047, 1173
DpnII GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
EaeI YGGCCR 1 cut(s) 744
EciI GGCGGA 2 cut(s) 974, 1037
Eco24I GRGCYC 3 cut(s) 559, 773, 1060
Eco31I GGTCTC 3 cut(s) 92, 707, 713
Eco32I GATATC 1 cut(s) 551
Eco47I GGWCC 2 cut(s) 749, 1105
Eco57I CTGAAG 1 cut(s) 1055
Eco81I CCTNAGG 1 cut(s) 663
Eco88I CYCGRG 6 cut(s) 155, 476, 507, 567, 752, 1059
EcoO109I RGGNCCY 1 cut(s) 1056
EcoRII CCWGG 3 cut(s) 729, 918, 1107
EcoRV GATATC 1 cut(s) 551
EcoT38I GRGCYC 3 cut(s) 559, 773, 1060
Esp3I CGTCTC 1 cut(s) 293
FaeI CATG 5 cut(s) 21, 367, 728, 779, 899
FatI CATG 5 cut(s) 17, 363, 724, 775, 895
FauI CCCGC 3 cut(s) 436, 511, 1011
FauNDI CATATG 2 cut(s) 247, 855
FblI GTMKAC 1 cut(s) 758
Fnu4HI GCNGC 3 cut(s) 225, 287, 368
FokI GGATG 4 cut(s) 550, 584, 977, 1040
FriOI GRGCYC 3 cut(s) 559, 773, 1060
Fsp4HI GCNGC 3 cut(s) 225, 287, 368
FspBI CTAG 3 cut(s) 116, 609, 1094
GluI GCNGC 3 cut(s) 225, 287, 368
GsaI CCCAGC 1 cut(s) 821
HaeIII GGCC 5 cut(s) 471, 746, 1032, 1058, 1160
HapII CCGG 3 cut(s) 568, 747, 1060
HgaI GACGC 1 cut(s) 635
Hin1I GRCGYC 2 cut(s) 318, 627
Hin1II CATG 5 cut(s) 21, 367, 728, 779, 899
HincII GTYRAC 1 cut(s) 316
HindII GTYRAC 1 cut(s) 316
HinfI GANTC 3 cut(s) 293, 755, 986
HpaII CCGG 3 cut(s) 568, 747, 1060
HphI GGTGA 4 cut(s) 50, 370, 616, 635
Hpy166II GTNNAC 3 cut(s) 316, 361, 759
Hpy188I TCNGA 4 cut(s) 298, 561, 981, 1002
Hpy188III TCNNGA 8 cut(s) 192, 329, 398, 509, 785, 808, 884, 929
Hpy8I GTNNAC 3 cut(s) 316, 361, 759
Hpy99I CGWCG 2 cut(s) 269, 323
HpyAV CCTTC 1 cut(s) 1030
HpyCH4III ACNGT 2 cut(s) 406, 583
HpyCH4IV ACGT 2 cut(s) 267, 318
HpyCH4V TGCA 1 cut(s) 1142
HpyF10VI GCNNNNNNNGC 5 cut(s) 248, 524, 965, 1148, 1157
HpyF3I CTNAG 7 cut(s) 432, 501, 600, 663, 906, 980, 994
HpySE526I ACGT 2 cut(s) 267, 318
Hsp92I GRCGYC 2 cut(s) 318, 627
Hsp92II CATG 5 cut(s) 21, 367, 728, 779, 899
KpnI GGTACC 1 cut(s) 846
Kzo9I GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
LmnI GCTCC 4 cut(s) 160, 436, 562, 1129
Lsp1109I GCAGC 3 cut(s) 211, 273, 354
LweI GCATC 2 cut(s) 229, 955
MaeI CTAG 3 cut(s) 116, 609, 1094
MaeII ACGT 2 cut(s) 267, 318
MaeIII GTNAC 5 cut(s) 343, 604, 623, 646, 898
MalI GATC 8 cut(s) 190, 324, 351, 888, 912, 999, 1047, 1173
MbiI CCGCTC 1 cut(s) 206
MboI GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
MboII GAAGA 1 cut(s) 317
MfeI CAATTG 1 cut(s) 458
MflI RGATCY 3 cut(s) 188, 910, 997
MhlI GDGCHC 3 cut(s) 559, 773, 1060
MluCI AATT 3 cut(s) 41, 458, 874
MlyI GAGTC 2 cut(s) 764, 995
MmeI TCCRAC 6 cut(s) 390, 584, 1014, 1045, 1107, 1167
MseI TTAA 1 cut(s) 642
MslI CAYNNNNRTG 1 cut(s) 59
MspA1I CMGCKG 2 cut(s) 905, 1018
MspI CCGG 3 cut(s) 568, 747, 1060
MspR9I CCNGG 7 cut(s) 568, 569, 731, 920, 1060, 1061, 1109
MunI CAATTG 1 cut(s) 458
MvaI CCWGG 3 cut(s) 731, 920, 1109
MvnI CGCG 1 cut(s) 786
MwoI GCNNNNNNNGC 5 cut(s) 248, 524, 965, 1148, 1157
NciI CCSGG 4 cut(s) 568, 569, 1060, 1061
NdeI CATATG 2 cut(s) 247, 855
NdeII GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
NlaIII CATG 5 cut(s) 21, 367, 728, 779, 899
NlaIV GGNNCC 7 cut(s) 190, 558, 751, 844, 912, 1058, 1161
NmuCI GTSAC 4 cut(s) 343, 604, 623, 898
NruI TCGCGA 1 cut(s) 786
NspI RCATGY 1 cut(s) 367
PfeI GAWTC 1 cut(s) 293
PfoI TCCNGGA 1 cut(s) 1107
PkrI GCNGC 3 cut(s) 226, 288, 369
PleI GAGTC 2 cut(s) 763, 994
PpsI GAGTC 2 cut(s) 763, 994
PshAI GACNNNNGTC 2 cut(s) 754, 1103
Psp6I CCWGG 3 cut(s) 729, 918, 1107
PspFI CCCAGC 1 cut(s) 817
PspGI CCWGG 3 cut(s) 729, 918, 1107
PspN4I GGNNCC 7 cut(s) 190, 558, 751, 844, 912, 1058, 1161
PspOMI GGGCCC 1 cut(s) 1056
PspPI GGNCC 6 cut(s) 469, 749, 1056, 1057, 1105, 1159
PsuI RGATCY 3 cut(s) 188, 910, 997
PvuII CAGCTG 1 cut(s) 905
RruI TCGCGA 1 cut(s) 786
RsaI GTAC 4 cut(s) 26, 700, 814, 844
RsaNI GTAC 4 cut(s) 25, 699, 813, 843
RseI CAYNNNNRTG 1 cut(s) 59
SaqAI TTAA 1 cut(s) 642
SatI GCNGC 3 cut(s) 225, 287, 368
Sau3AI GATC 8 cut(s) 188, 322, 349, 886, 910, 997, 1045, 1171
Sau96I GGNCC 6 cut(s) 469, 749, 1056, 1057, 1105, 1159
SchI GAGTC 2 cut(s) 764, 995
ScrFI CCNGG 7 cut(s) 568, 569, 731, 920, 1060, 1061, 1109
SduI GDGCHC 3 cut(s) 559, 773, 1060
SfaNI GCATC 2 cut(s) 229, 955
SfcI CTRYAG 3 cut(s) 174, 636, 1013
SinI GGWCC 2 cut(s) 749, 1105
SmaI CCCGGG 2 cut(s) 569, 1061
SmiMI CAYNNNNRTG 1 cut(s) 59
SmlI CTYRAG 1 cut(s) 388
SmoI CTYRAG 1 cut(s) 388
Sse9I AATT 3 cut(s) 41, 458, 874
SsiI CCGC 7 cut(s) 206, 251, 443, 518, 959, 1018, 1022
SspMI CTAG 3 cut(s) 116, 609, 1094
StyD4I CCNGG 7 cut(s) 566, 567, 729, 918, 1058, 1059, 1107
TaaI ACNGT 2 cut(s) 406, 583
TaiI ACGT 2 cut(s) 270, 321
TaqI TCGA 3 cut(s) 321, 669, 928
TaqII GACCGA 2 cut(s) 362, 731
TasI AATT 3 cut(s) 41, 458, 874
TatI WGTACW 1 cut(s) 24
TfiI GAWTC 1 cut(s) 293
Tru1I TTAA 1 cut(s) 642
Tru9I TTAA 1 cut(s) 642
TscAI CASTG 1 cut(s) 586
TseFI GTSAC 4 cut(s) 343, 604, 623, 898
TseI GCWGC 3 cut(s) 224, 286, 367
Tsp45I GTSAC 4 cut(s) 343, 604, 623, 898
TspDTI ATGAA 2 cut(s) 35, 398
TspGWI ACGGA 1 cut(s) 317
TspMI CCCGGG 2 cut(s) 567, 1059
TspRI CASTG 1 cut(s) 586
VpaK11BI GGWCC 2 cut(s) 749, 1105
XapI RAATTY 1 cut(s) 41
XceI RCATGY 1 cut(s) 367
XcmI CCANNNNNNNNNTGG 1 cut(s) 853
XmaI CCCGGG 2 cut(s) 567, 1059
XmiI GTMKAC 1 cut(s) 758
XspI CTAG 3 cut(s) 116, 609, 1094
ZraI GACGTC 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.