Rmu_sc0024226.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0024226.1
OG0000075
Physical Location & Seq
Forward (+)
15450 .. 21143
5694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0024226.1_g000006.1.cds

Sequence Viewer

Length: 1725 bp
atggttgacccaaacccagaccaccaatccaccacgccggcagtggtctgtgcagcgcagccctcgagtcccgccacgaaccagccatgccatgatccccgccatgaaccagccccaccacgagccgcaccgtctagcttcgtcacaagccagcaccgcctcgagccccaagccactgcagatacagcgcccagccccgatcgccgcaagccacaccgtcgcctagacgcccactattcgcagtcaccggatcacaccgtccctgcacagaaactaccacagatgcacagaaagaccgcccacctagcaatagatgacgtggccgaagccggccctatccatggcagccgccggacagggaacaatctgataactgtaacagaatttcgcgtccagactgttcttcatagcaaggttttcatgtttaagctcttgatcttccgggagcctatgatgcatcacacttcctccatgaccggttttcccactcaccataagatcagtgcatgttacaagttacaatactcagggaagaaaggcgataatggttgtgttactatgaaggttggtaaatatggggccatagtggaggatttgttgtccttcgtttatcagcaatggagagacaaagttatgattaccagtgggggatggcgaaatgaagatctacctcccgtgtcttgccacttccagcctctgatttcgcaattgattaaattaactgatttagagaggcaccgcatattgagggttgtgaaatgcttccccaaagggacgggtactggtacaagtgcccaggtgaagcaagacgctgctgctcataagttagccaagagtctgaagaagagaggtgtggatgaggactacatccctcaaatggtggaagacttgtggcactgctctcgggatctgcccagcataaacactggtgacgagctggtggaccttattgtcgctaagaaaaagttgatgagggctgtgtgcatgaattatactgctggtggtaagctaagggcatcacttgaagggaaggataagttgcagtttgtgctggatgccgaaagggcaaaaagagaagagattgagctggcccttcaggataccctgagggcacatgacgaccttgaggctaagttcaaaaaggctgaagagaacctcattgcagaaagaaaagatgctgtggttttcggtgcaatttttttcggttttcggtttcgcgagcccacccctggatggtccaagttctctcgatcgtcaaagttatcgtctcaaggctctagtactggtacaagtgcccaggtgaagcaagacgctgctgctcataagttagccaagagtctgaagaagagaggtgtggatgaggactacatccctcaaatggtggaagacttgtggcactgctctcgggatctgcccagcataaacactggtgacgagctggtggaccttattgtcgctaagaaaaagttgatgagggctgtgtgcatgaattatactgctggtggtaagctaagggcatcacttgaagggaaggataagttgcagtttgtgctggatgccgaaagggcaaaaagagaagagattgagctggcccttcaggataccctgagggcacatgacgaccttgaggctaagttcaaaaaggctgaagagaacctcattgcagaaagaaaagatgctgtggttggccggaagtatactgctgagttggagcagaagatctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

574

Amino Acids

64.28

Weight (kDa)

9.08

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0348161 RchiOBHm_Chr1g0367481 RchiOBHm_Chr1g0368431 RchiOBHm_Chr2g0116021 RchiOBHm_Chr2g0133961 RchiOBHm_Chr4g0390151 RchiOBHm_Chr4g0402771 RchiOBHm_Chr4g0419581 RchiOBHm_Chr5g0054351 RchiOBHm_Chr6g0278891 RchiOBHm_Chr7g0201941 RchiOBHm_Chr7g0242761
rosa_laevigata RLG00000002487 RLG00000002488 RLG00000003412 RLG00000003415 RLG00000013607 RLG00000018981 RLG00000018982 RLG00000034520 RLG00000034521
rosa_multiflora Rmu_co8024510.1_g000001 Rmu_co8121892.1_g000001 Rmu_co8133046.1_g000001 Rmu_co8158032.1_g000001 Rmu_co8181114.1_g000001 Rmu_co8202532.1_g000001 Rmu_co8331471.1_g000001 Rmu_co8340209.1_g000001 Rmu_co8359899.1_g000001 Rmu_co8433657.1_g000002 Rmu_co8436419.1_g000002 Rmu_co8458211.1_g000002 Rmu_co8458731.1_g000002 Rmu_co8466361.1_g000001 Rmu_co8474565.1_g000001 Rmu_co8474565.1_g000002 Rmu_co8482201.1_g000001 Rmu_co8491967.1_g000003 Rmu_co8498095.1_g000001 Rmu_co8513217.1_g000002 Rmu_co8518257.1_g000001 Rmu_co8520425.1_g000003 Rmu_co8521283.1_g000003 Rmu_sc0000029.1_g000029 Rmu_sc0000082.1_g000019 Rmu_sc0000147.1_g000107 Rmu_sc0000212.1_g000005 Rmu_sc0000247.1_g000030 Rmu_sc0000367.1_g000175 Rmu_sc0000433.1_g000035 Rmu_sc0000538.1_g000038 Rmu_sc0000550.1_g000010 Rmu_sc0000635.1_g000007 Rmu_sc0000650.1_g000012 Rmu_sc0000652.1_g000009 Rmu_sc0000652.1_g000010 Rmu_sc0000742.1_g000010 Rmu_sc0000750.1_g000007 Rmu_sc0000750.1_g000008 Rmu_sc0000772.1_g000018 Rmu_sc0000830.1_g000026 Rmu_sc0000859.1_g000006 Rmu_sc0001190.1_g000039 Rmu_sc0001190.1_g000050 Rmu_sc0001190.1_g000051 Rmu_sc0001205.1_g000008 Rmu_sc0001294.1_g000025 Rmu_sc0001366.1_g000010 Rmu_sc0001373.1_g000036 Rmu_sc0001423.1_g000046 Rmu_sc0001788.1_g000014 Rmu_sc0001801.1_g000016 Rmu_sc0001849.1_g000032 Rmu_sc0001967.1_g000002 Rmu_sc0002082.1_g000066 Rmu_sc0002250.1_g000013 Rmu_sc0002322.1_g000039 Rmu_sc0002371.1_g000002 Rmu_sc0002522.1_g000036 Rmu_sc0002532.1_g000048 Rmu_sc0002669.1_g000065 Rmu_sc0002669.1_g000067 Rmu_sc0002669.1_g000069 Rmu_sc0002834.1_g000007 Rmu_sc0003226.1_g000070 Rmu_sc0003260.1_g000018 Rmu_sc0003313.1_g000007 Rmu_sc0003441.1_g000018 Rmu_sc0003490.1_g000008 Rmu_sc0003705.1_g000011 Rmu_sc0003737.1_g000013 Rmu_sc0003748.1_g000020 Rmu_sc0003910.1_g000015 Rmu_sc0003919.1_g000029 Rmu_sc0003919.1_g000031 Rmu_sc0004037.1_g000012 Rmu_sc0004099.1_g000003 Rmu_sc0004122.1_g000013 Rmu_sc0004402.1_g000013 Rmu_sc0004646.1_g000035 Rmu_sc0004688.1_g000024 Rmu_sc0004823.1_g000046 Rmu_sc0004869.1_g000003 Rmu_sc0004869.1_g000004 Rmu_sc0005132.1_g000035 Rmu_sc0005190.1_g000001 Rmu_sc0005229.1_g000005 Rmu_sc0005229.1_g000023 Rmu_sc0005363.1_g000034 Rmu_sc0005537.1_g000006 Rmu_sc0005657.1_g000024 Rmu_sc0005856.1_g000011 Rmu_sc0005856.1_g000012 Rmu_sc0005953.1_g000007 Rmu_sc0005971.1_g000015 Rmu_sc0006287.1_g000004 Rmu_sc0006315.1_g000014 Rmu_sc0006518.1_g000003 Rmu_sc0006695.1_g000066 Rmu_sc0006803.1_g000056 Rmu_sc0006822.1_g000002 Rmu_sc0006926.1_g000011 Rmu_sc0007560.1_g000008 Rmu_sc0007582.1_g000005 Rmu_sc0007618.1_g000025 Rmu_sc0007647.1_g000004 Rmu_sc0007656.1_g000013 Rmu_sc0007877.1_g000011 Rmu_sc0008528.1_g000005 Rmu_sc0008528.1_g000006 Rmu_sc0008749.1_g000004 Rmu_sc0008989.1_g000003 Rmu_sc0009120.1_g000010 Rmu_sc0009663.1_g000009 Rmu_sc0010035.1_g000001 Rmu_sc0010160.1_g000010 Rmu_sc0010160.1_g000011 Rmu_sc0010953.1_g000004 Rmu_sc0011008.1_g000006 Rmu_sc0011452.1_g000009 Rmu_sc0012746.1_g000014 Rmu_sc0013612.1_g000017 Rmu_sc0013951.1_g000011 Rmu_sc0014162.1_g000009 Rmu_sc0014162.1_g000010 Rmu_sc0016149.1_g000003 Rmu_sc0016418.1_g000008 Rmu_sc0016418.1_g000009 Rmu_sc0017353.1_g000001 Rmu_sc0017353.1_g000002 Rmu_sc0018537.1_g000012 Rmu_sc0019739.1_g000003 Rmu_sc0019739.1_g000004 Rmu_sc0020186.1_g000016 Rmu_sc0021611.1_g000001 Rmu_sc0022755.1_g000003 Rmu_sc0024226.1_g000006 Rmu_sc0025769.1_g000004 Rmu_sc0025769.1_g000005 Rmu_sc0030235.1_g000004 Rmu_sc0035508.1_g000007 Rmu_sc0036413.1_g000001 Rmu_sc0037646.1_g000001 Rmu_sc0037646.1_g000002 Rmu_sc0037647.1_g000001 Rmu_sc0037647.1_g000002 Rmu_sc0037678.1_g000001 Rmu_ssc0000072.1_g000010 Rmu_ssc0000116.1_g000041 Rmu_ssc0000127.1_g000018 Rmu_ssc0000175.1_g000018 Rmu_ssc0000175.1_g000019 Rmu_ssc0000175.1_g000020 Rmu_ssc0000197.1_g000037 Rmu_ssc0000213.1_g000051 Rmu_ssc0000359.1_g000008 Rmu_ssc0000392.1_g000019
rosa_roxburghii Rroxscaffold_154G00447930 Rroxscaffold_1G00000570 Rroxscaffold_1G00009890 Rroxscaffold_1G00012210 Rroxscaffold_1G00012960 Rroxscaffold_1G00014650 Rroxscaffold_1G00014660 Rroxscaffold_1G00014670 Rroxscaffold_1G00022880 Rroxscaffold_1G00024640 Rroxscaffold_1G00024650 Rroxscaffold_1G00025670 Rroxscaffold_1G00025680 Rroxscaffold_1G00025690 Rroxscaffold_1G00030660 Rroxscaffold_1G00031340 Rroxscaffold_1G00031350 Rroxscaffold_2G00103100 Rroxscaffold_2G00103120 Rroxscaffold_2G00107390 Rroxscaffold_2G00108940 Rroxscaffold_2G00110610 Rroxscaffold_2G00110620 Rroxscaffold_2G00110710 Rroxscaffold_2G00110720 Rroxscaffold_2G00110730 Rroxscaffold_2G00111170 Rroxscaffold_2G00111510 Rroxscaffold_2G00114750 Rroxscaffold_2G00114760 Rroxscaffold_2G00114770 Rroxscaffold_2G00116270 Rroxscaffold_2G00121090 Rroxscaffold_2G00129350 Rroxscaffold_2G00130410 Rroxscaffold_2G00155930 Rroxscaffold_3G00218120 Rroxscaffold_3G00218330 Rroxscaffold_3G00218340 Rroxscaffold_3G00227530 Rroxscaffold_3G00233140 Rroxscaffold_3G00236800 Rroxscaffold_3G00242370 Rroxscaffold_3G00242380 Rroxscaffold_3G00242410 Rroxscaffold_3G00248720 Rroxscaffold_3G00248730 Rroxscaffold_3G00248770 Rroxscaffold_3G00258550 Rroxscaffold_3G00258560 Rroxscaffold_4G00287000 Rroxscaffold_4G00289070 Rroxscaffold_4G00289080 Rroxscaffold_4G00289100 Rroxscaffold_4G00295600 Rroxscaffold_4G00298090 Rroxscaffold_4G00308330 Rroxscaffold_4G00310570 Rroxscaffold_4G00310580 Rroxscaffold_4G00310620 Rroxscaffold_4G00315750 Rroxscaffold_4G00319620 Rroxscaffold_4G00319630 Rroxscaffold_4G00328870 Rroxscaffold_4G00328880 Rroxscaffold_4G00332120 Rroxscaffold_4G00332310 Rroxscaffold_5G00332660 Rroxscaffold_5G00332710 Rroxscaffold_5G00332970 Rroxscaffold_5G00344920 Rroxscaffold_5G00345540 Rroxscaffold_5G00346760 Rroxscaffold_5G00346770 Rroxscaffold_5G00347420 Rroxscaffold_5G00350360 Rroxscaffold_5G00350370 Rroxscaffold_5G00354490 Rroxscaffold_5G00370760 Rroxscaffold_5G00370770 Rroxscaffold_5G00374010 Rroxscaffold_5G00374020 Rroxscaffold_5G00374490 Rroxscaffold_5G00374510 Rroxscaffold_5G00387640 Rroxscaffold_5G00387650 Rroxscaffold_6G00387870 Rroxscaffold_6G00388560 Rroxscaffold_6G00388570 Rroxscaffold_6G00388670 Rroxscaffold_6G00388680 Rroxscaffold_6G00391960 Rroxscaffold_6G00393010 Rroxscaffold_6G00395010 Rroxscaffold_6G00395020 Rroxscaffold_6G00397990 Rroxscaffold_6G00401460 Rroxscaffold_6G00407850 Rroxscaffold_6G00423090 Rroxscaffold_6G00423100 Rroxscaffold_6G00423110 Rroxscaffold_7G00165960 Rroxscaffold_7G00165970 Rroxscaffold_7G00176270 Rroxscaffold_7G00176280 Rroxscaffold_7G00176600 Rroxscaffold_7G00176610 Rroxscaffold_7G00176620 Rroxscaffold_7G00176660 Rroxscaffold_7G00195710
rosa_rugosa Rorug03G0209000 Rorug05G0468000 Rorug05G0468000
rosa_samantha Rh3AG250900 Rh3AG257700 Rh3BG294700 Rh3CG284700 Rh3CG284800 Rh3DG280200 Rh3DG280300 Rh3DG280500 Rh3DG287600 Rh3DG287700 Rh4BG408500 Rh4DG402700 Rh6CG194400 Rh6CG194600 Rh6DG186400 Rh6DG186500 Rh7AG218100 Rh7AG278800 Rh7BG224200 Rh7CG231300 Rh7CG231400 Rh7DG225400
rosa_wichuraiana Rw3G022640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 950, 1451
AccB1I GGYRCC 1 cut(s) 735
AccI GTMKAC 1 cut(s) 1697
AccII CGCG 2 cut(s) 390, 1218
AciI CCGC 8 cut(s) 72, 100, 126, 157, 205, 297, 349, 739
AclWI GGATC 4 cut(s) 89, 258, 915, 1416
AcoI YGGCCR 2 cut(s) 321, 1687
AcsI RAATTY 1 cut(s) 383
AcuI CTGAAG 6 cut(s) 860, 1079, 1167, 1361, 1580, 1668
AcyI GRCGYC 1 cut(s) 228
AfaI GTAC 4 cut(s) 781, 787, 1282, 1288
AfiI CCNNNNNNNGG 5 cut(s) 341, 877, 1229, 1233, 1378
AgeI ACCGGT 1 cut(s) 476
AgsI TTSAA 4 cut(s) 1025, 1138, 1526, 1639
AjiI CACGTC 1 cut(s) 319
AjnI CCWGG 3 cut(s) 795, 1228, 1296
AluBI AGCT 8 cut(s) 138, 430, 937, 1009, 1087, 1438, 1510, 1588
AluI AGCT 8 cut(s) 138, 430, 937, 1009, 1087, 1438, 1510, 1588
Alw26I GTCTC 2 cut(s) 618, 1272
AlwI GGATC 4 cut(s) 89, 258, 915, 1416
AlwNI CAGNNNCTG 1 cut(s) 697
Ama87I CYCGRG 4 cut(s) 64, 161, 903, 1404
AoxI GGCC 6 cut(s) 321, 331, 579, 1089, 1590, 1687
ApeKI GCWGC 7 cut(s) 53, 58, 345, 812, 815, 1313, 1316
ApoI RAATTY 1 cut(s) 383
ArsI GACNNNNNNTTYG 2 cut(s) 1250, 1282
AsiGI ACCGGT 1 cut(s) 476
Asp700I GAANNNNTTC 1 cut(s) 761
AspLEI GCGC 2 cut(s) 58, 190
AspS9I GGNCC 7 cut(s) 332, 579, 943, 1090, 1236, 1444, 1591
AsuC2I CCSGG 1 cut(s) 443
AsuHPI GGTGA 6 cut(s) 237, 482, 811, 941, 1312, 1442
AvaI CYCGRG 4 cut(s) 64, 161, 903, 1404
AvaII GGWCC 3 cut(s) 943, 1236, 1444
AxyI CCTNAGG 2 cut(s) 1106, 1607
BaeGI GKGCMC 4 cut(s) 796, 1114, 1297, 1615
BanI GGYRCC 1 cut(s) 735
BanII GRGCYC 2 cut(s) 168, 1224
BauI CACGAG 1 cut(s) 120
BbsI GAAGAC 2 cut(s) 891, 1392
BbvI GCAGC 7 cut(s) 65, 70, 357, 799, 802, 1300, 1303
BccI CCATC 2 cut(s) 645, 1227
BcgI CGANNNNNNTGC 4 cut(s) 884, 918, 1385, 1419
BciT130I CCWGG 3 cut(s) 797, 1230, 1298
BciVI GTATCC 2 cut(s) 1093, 1594
BcnI CCSGG 1 cut(s) 443
BcoDI GTCTC 2 cut(s) 618, 1272
BfaI CTAG 4 cut(s) 135, 224, 305, 1278
BfmI CTRYAG 1 cut(s) 177
BfoI RGCGCY 1 cut(s) 191
BfuI GTATCC 2 cut(s) 1093, 1594
BglI GCCNNNNNGGC 2 cut(s) 1064, 1565
BglII AGATCT 2 cut(s) 664, 1719
BmcAI AGTACT 1 cut(s) 1282
Bme1390I CCNGG 4 cut(s) 443, 797, 1230, 1298
Bme18I GGWCC 3 cut(s) 943, 1236, 1444
BmeT110I CYCGRG 4 cut(s) 64, 161, 903, 1404
BmgBI CACGTC 1 cut(s) 319
BmgT120I GGNCC 7 cut(s) 332, 579, 943, 1090, 1236, 1444, 1591
BmiI GGNNCC 3 cut(s) 447, 580, 737
BmrFI CCNGG 4 cut(s) 443, 797, 1230, 1298
BmsI GCATC 9 cut(s) 273, 444, 466, 1025, 1045, 1165, 1526, 1546, 1666
BpiI GAAGAC 2 cut(s) 891, 1392
Bpu10I CCTNAGC 2 cut(s) 1010, 1511
BpuEI CTTGAG 3 cut(s) 1145, 1254, 1646
BpuMI CCSGG 1 cut(s) 443
BsaHI GRCGYC 1 cut(s) 228
BsaJI CCNNGG 4 cut(s) 340, 795, 1228, 1296
BsaWI WCCGGW 2 cut(s) 247, 476
BsaXI ACNNNNNCTCC 4 cut(s) 452, 482, 581, 611
Bsc4I CCNNNNNNNGG 5 cut(s) 341, 877, 1229, 1233, 1378
Bse118I RCCGGY 3 cut(s) 37, 329, 476
Bse1I ACTGG 5 cut(s) 642, 787, 931, 1288, 1432
Bse21I CCTNAGG 2 cut(s) 1106, 1607
Bse3DI GCAATG 3 cut(s) 623, 1158, 1659
BseBI CCWGG 3 cut(s) 797, 1230, 1298
BseDI CCNNGG 4 cut(s) 340, 795, 1228, 1296
BseGI GGATG 8 cut(s) 656, 862, 867, 1060, 1238, 1363, 1368, 1561
BseLI CCNNNNNNNGG 5 cut(s) 341, 877, 1229, 1233, 1378
BseMI GCAATG 3 cut(s) 623, 1158, 1659
BseMII CTCAG 4 cut(s) 540, 1097, 1598, 1695
BseNI ACTGG 5 cut(s) 642, 787, 931, 1288, 1432
BseSI GKGCMC 4 cut(s) 796, 1114, 1297, 1615
BseXI GCAGC 7 cut(s) 65, 70, 357, 799, 802, 1300, 1303
BseYI CCCAGC 3 cut(s) 191, 914, 1415
BsgI GTGCAG 2 cut(s) 72, 249
Bsh1236I CGCG 2 cut(s) 390, 1218
Bsh1285I CGRYCG 2 cut(s) 202, 1253
BshFI GGCC 6 cut(s) 323, 333, 581, 1091, 1592, 1689
BshNI GGYRCC 1 cut(s) 735
BshTI ACCGGT 1 cut(s) 476
BsiEI CGRYCG 2 cut(s) 202, 1253
BsiHKCI CYCGRG 4 cut(s) 64, 161, 903, 1404
BsiSI CCGG 7 cut(s) 38, 248, 330, 352, 442, 477, 1690
BslFI GGGAC 3 cut(s) 54, 245, 787
BslI CCNNNNNNNGG 5 cut(s) 341, 877, 1229, 1233, 1378
BsmAI GTCTC 2 cut(s) 618, 1272
BsmBI CGTCTC 1 cut(s) 1272
BsmFI GGGAC 3 cut(s) 54, 245, 787
BsnI GGCC 6 cut(s) 323, 333, 581, 1091, 1592, 1689
BsoBI CYCGRG 4 cut(s) 64, 161, 903, 1404
Bsp1286I GDGCHC 6 cut(s) 168, 796, 1114, 1224, 1297, 1615
Bsp19I CCATGG 1 cut(s) 340
Bsp68I TCGCGA 1 cut(s) 1218
BspACI CCGC 8 cut(s) 72, 100, 126, 157, 205, 297, 349, 739
BspANI GGCC 6 cut(s) 323, 333, 581, 1091, 1592, 1689
BspCNI CTCAG 4 cut(s) 539, 1098, 1599, 1696
BspFNI CGCG 2 cut(s) 390, 1218
BspLI GGNNCC 3 cut(s) 447, 580, 737
BspMAI CTGCAG 1 cut(s) 181
BspPI GGATC 4 cut(s) 89, 258, 915, 1416
BspT107I GGYRCC 1 cut(s) 735
BsrDI GCAATG 3 cut(s) 623, 1158, 1659
BsrFI RCCGGY 3 cut(s) 37, 329, 476
BsrI ACTGG 5 cut(s) 642, 787, 931, 1288, 1432
BssAI RCCGGY 3 cut(s) 37, 329, 476
BssECI CCNNGG 4 cut(s) 340, 795, 1228, 1296
BssNAI GTATAC 1 cut(s) 1698
BssNI GRCGYC 1 cut(s) 228
BssSI CACGAG 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 340
Bst1107I GTATAC 1 cut(s) 1698
Bst2BI CACGAG 1 cut(s) 120
Bst2UI CCWGG 3 cut(s) 797, 1230, 1298
Bst4CI ACNGT 5 cut(s) 132, 218, 259, 376, 400
Bst6I CTCTTC 6 cut(s) 839, 1071, 1143, 1340, 1572, 1644
BstACI GRCGYC 1 cut(s) 228
BstAPI GCANNNNNTGC 2 cut(s) 1048, 1549
BstC8I GCNNGC 7 cut(s) 39, 152, 209, 331, 1089, 1220, 1590
BstDSI CCRYGG 1 cut(s) 340
BstF5I GGATG 8 cut(s) 656, 862, 867, 1060, 1238, 1363, 1368, 1561
BstFNI CGCG 2 cut(s) 390, 1218
BstH2I RGCGCY 1 cut(s) 191
BstHHI GCGC 2 cut(s) 58, 190
BstMAI GTCTC 2 cut(s) 618, 1272
BstMCI CGRYCG 2 cut(s) 202, 1253
BstMWI GCNNNNNNNGC 9 cut(s) 156, 185, 201, 305, 454, 1048, 1064, 1549, 1565
BstNI CCWGG 3 cut(s) 797, 1230, 1298
BstNSI RCATGY 1 cut(s) 510
BstSCI CCNGG 4 cut(s) 441, 795, 1228, 1296
BstSFI CTRYAG 1 cut(s) 177
BstSLI GKGCMC 4 cut(s) 796, 1114, 1297, 1615
BstUI CGCG 2 cut(s) 390, 1218
BstV1I GCAGC 7 cut(s) 65, 70, 357, 799, 802, 1300, 1303
BstV2I GAAGAC 2 cut(s) 891, 1392
BstX2I RGATCY 4 cut(s) 664, 907, 1408, 1719
BstYI RGATCY 4 cut(s) 664, 907, 1408, 1719
BstZ17I GTATAC 1 cut(s) 1698
Bsu36I CCTNAGG 2 cut(s) 1106, 1607
BsuI GTATCC 2 cut(s) 1093, 1594
BsuRI GGCC 6 cut(s) 323, 333, 581, 1091, 1592, 1689
BtgI CCRYGG 1 cut(s) 340
BtrI CACGTC 1 cut(s) 319
BtsCI GGATG 8 cut(s) 656, 862, 867, 1060, 1238, 1363, 1368, 1561
BtsI GCAGTG 4 cut(s) 48, 174, 895, 1396
BtsIMutI CAGTG 8 cut(s) 48, 174, 508, 649, 895, 924, 1396, 1425
BtuMI TCGCGA 1 cut(s) 1218
Cac8I GCNNGC 7 cut(s) 39, 152, 209, 331, 1089, 1220, 1590
CaiI CAGNNNCTG 1 cut(s) 697
CfoI GCGC 2 cut(s) 58, 190
Cfr10I RCCGGY 3 cut(s) 37, 329, 476
Cfr13I GGNCC 7 cut(s) 332, 579, 943, 1090, 1236, 1444, 1591
CseI GACGC 4 cut(s) 236, 379, 818, 1319
Csp6I GTAC 4 cut(s) 780, 786, 1281, 1287
CspAI ACCGGT 1 cut(s) 476
CviQI GTAC 4 cut(s) 780, 786, 1281, 1287
DrdI GACNNNNNNGTC 2 cut(s) 950, 1451
DseDI GACNNNNNNGTC 2 cut(s) 950, 1451
EaeI YGGCCR 2 cut(s) 321, 1687
Eam1104I CTCTTC 6 cut(s) 839, 1071, 1143, 1340, 1572, 1644
EarI CTCTTC 6 cut(s) 839, 1071, 1143, 1340, 1572, 1644
Eco130I CCWWGG 1 cut(s) 340
Eco24I GRGCYC 2 cut(s) 168, 1224
Eco47I GGWCC 3 cut(s) 943, 1236, 1444
Eco57I CTGAAG 6 cut(s) 860, 1079, 1167, 1361, 1580, 1668
Eco81I CCTNAGG 2 cut(s) 1106, 1607
Eco88I CYCGRG 4 cut(s) 64, 161, 903, 1404
EcoRII CCWGG 3 cut(s) 795, 1228, 1296
EcoT14I CCWWGG 1 cut(s) 340
EcoT22I ATGCAT 1 cut(s) 459
EcoT38I GRGCYC 2 cut(s) 168, 1224
ErhI CCWWGG 1 cut(s) 340
Esp3I CGTCTC 1 cut(s) 1272
FaqI GGGAC 3 cut(s) 54, 245, 787
FauI CCCGC 2 cut(s) 79, 107
FblI GTMKAC 1 cut(s) 1697
FokI GGATG 8 cut(s) 663, 854, 869, 1067, 1245, 1355, 1370, 1568
FriOI GRGCYC 2 cut(s) 168, 1224
FspBI CTAG 4 cut(s) 135, 224, 305, 1278
GlaI GCGC 2 cut(s) 57, 189
GsaI CCCAGC 3 cut(s) 195, 918, 1419
HaeII RGCGCY 1 cut(s) 191
HaeIII GGCC 6 cut(s) 323, 333, 581, 1091, 1592, 1689
HapII CCGG 7 cut(s) 38, 248, 330, 352, 442, 477, 1690
HgaI GACGC 4 cut(s) 236, 379, 818, 1319
HhaI GCGC 2 cut(s) 58, 190
Hin1I GRCGYC 1 cut(s) 228
Hin6I GCGC 2 cut(s) 56, 188
HinP1I GCGC 2 cut(s) 56, 188
HincII GTYRAC 1 cut(s) 7
HindII GTYRAC 1 cut(s) 7
HinfI GANTC 3 cut(s) 67, 835, 1336
HpaII CCGG 7 cut(s) 38, 248, 330, 352, 442, 477, 1690
HphI GGTGA 6 cut(s) 237, 482, 811, 941, 1312, 1442
Hpy166II GTNNAC 4 cut(s) 7, 943, 1444, 1698
Hpy188I TCNGA 4 cut(s) 369, 699, 840, 1341
Hpy188III TCNNGA 8 cut(s) 394, 433, 905, 1097, 1217, 1248, 1406, 1598
Hpy8I GTNNAC 4 cut(s) 7, 943, 1444, 1698
Hpy99I CGWCG 1 cut(s) 222
HpyAV CCTTC 8 cut(s) 556, 613, 1019, 1024, 1103, 1520, 1525, 1604
HpyCH4III ACNGT 5 cut(s) 132, 218, 259, 376, 400
HpyCH4IV ACGT 1 cut(s) 318
HpyF10VI GCNNNNNNNGC 9 cut(s) 156, 185, 201, 305, 454, 1048, 1064, 1549, 1565
HpySE526I ACGT 1 cut(s) 318
Hsp92I GRCGYC 1 cut(s) 228
HspAI GCGC 2 cut(s) 56, 188
KroI GCCGGC 2 cut(s) 37, 329
KroNI GCCGGC 2 cut(s) 39, 331
LmnI GCTCC 2 cut(s) 445, 1711
Lsp1109I GCAGC 7 cut(s) 65, 70, 357, 799, 802, 1300, 1303
LweI GCATC 9 cut(s) 273, 444, 466, 1025, 1045, 1165, 1526, 1546, 1666
MaeI CTAG 4 cut(s) 135, 224, 305, 1278
MaeII ACGT 1 cut(s) 318
MaeIII GTNAC 8 cut(s) 142, 243, 376, 509, 516, 553, 929, 1430
MfeI CAATTG 1 cut(s) 707
MflI RGATCY 4 cut(s) 664, 907, 1408, 1719
MhlI GDGCHC 6 cut(s) 168, 796, 1114, 1224, 1297, 1615
MluCI AATT 6 cut(s) 383, 707, 716, 988, 1194, 1489
MlyI GAGTC 3 cut(s) 76, 844, 1345
MmeI TCCRAC 1 cut(s) 1689
Mph1103I ATGCAT 1 cut(s) 459
MroNI GCCGGC 2 cut(s) 37, 329
MroXI GAANNNNTTC 1 cut(s) 761
MseI TTAA 3 cut(s) 426, 714, 719
MspI CCGG 7 cut(s) 38, 248, 330, 352, 442, 477, 1690
MspR9I CCNGG 4 cut(s) 443, 797, 1230, 1298
MunI CAATTG 1 cut(s) 707
MvaI CCWGG 3 cut(s) 797, 1230, 1298
MvnI CGCG 2 cut(s) 390, 1218
MwoI GCNNNNNNNGC 9 cut(s) 156, 185, 201, 305, 454, 1048, 1064, 1549, 1565
NaeI GCCGGC 2 cut(s) 39, 331
NciI CCSGG 1 cut(s) 443
NcoI CCATGG 1 cut(s) 340
NgoMIV GCCGGC 2 cut(s) 37, 329
NlaIV GGNNCC 3 cut(s) 447, 580, 737
NmuCI GTSAC 4 cut(s) 142, 243, 929, 1430
NruI TCGCGA 1 cut(s) 1218
NsiI ATGCAT 1 cut(s) 459
NspI RCATGY 1 cut(s) 510
PaeR7I CTCGAG 2 cut(s) 64, 161
PdiI GCCGGC 2 cut(s) 39, 331
PdmI GAANNNNTTC 1 cut(s) 761
PfoI TCCNGGA 1 cut(s) 441
PinAI ACCGGT 1 cut(s) 476
Ple19I CGATCG 2 cut(s) 202, 1253
PleI GAGTC 3 cut(s) 75, 843, 1344
PpsI GAGTC 3 cut(s) 75, 843, 1344
Psp6I CCWGG 3 cut(s) 795, 1228, 1296
PspFI CCCAGC 3 cut(s) 191, 914, 1415
PspGI CCWGG 3 cut(s) 795, 1228, 1296
PspN4I GGNNCC 3 cut(s) 447, 580, 737
PspPI GGNCC 7 cut(s) 332, 579, 943, 1090, 1236, 1444, 1591
PspXI VCTCGAGB 2 cut(s) 64, 161
PstI CTGCAG 1 cut(s) 181
PstNI CAGNNNCTG 1 cut(s) 697
PsuI RGATCY 4 cut(s) 664, 907, 1408, 1719
PvuI CGATCG 2 cut(s) 202, 1253
RruI TCGCGA 1 cut(s) 1218
RsaI GTAC 4 cut(s) 781, 787, 1282, 1288
RsaNI GTAC 4 cut(s) 780, 786, 1281, 1287
SaqAI TTAA 3 cut(s) 426, 714, 719
Sau96I GGNCC 7 cut(s) 332, 579, 943, 1090, 1236, 1444, 1591
ScaI AGTACT 1 cut(s) 1282
SchI GAGTC 3 cut(s) 76, 844, 1345
ScrFI CCNGG 4 cut(s) 443, 797, 1230, 1298
SduI GDGCHC 6 cut(s) 168, 796, 1114, 1224, 1297, 1615
SfaNI GCATC 9 cut(s) 273, 444, 466, 1025, 1045, 1165, 1526, 1546, 1666
SfcI CTRYAG 1 cut(s) 177
Sfr274I CTCGAG 2 cut(s) 64, 161
SinI GGWCC 3 cut(s) 943, 1236, 1444
SlaI CTCGAG 2 cut(s) 64, 161
SmlI CTYRAG 5 cut(s) 64, 161, 1124, 1269, 1625
SmoI CTYRAG 5 cut(s) 64, 161, 1124, 1269, 1625
Sse9I AATT 6 cut(s) 383, 707, 716, 988, 1194, 1489
SsiI CCGC 8 cut(s) 72, 100, 126, 157, 205, 297, 349, 739
SspMI CTAG 4 cut(s) 135, 224, 305, 1278
StyD4I CCNGG 4 cut(s) 441, 795, 1228, 1296
StyI CCWWGG 1 cut(s) 340
TaaI ACNGT 5 cut(s) 132, 218, 259, 376, 400
TaiI ACGT 1 cut(s) 321
TaqI TCGA 3 cut(s) 65, 162, 1249
TasI AATT 6 cut(s) 383, 707, 716, 988, 1194, 1489
TatI WGTACW 1 cut(s) 1280
TauI GCSGC 3 cut(s) 128, 207, 351
Tru1I TTAA 3 cut(s) 426, 714, 719
Tru9I TTAA 3 cut(s) 426, 714, 719
TscAI CASTG 8 cut(s) 48, 181, 508, 649, 902, 931, 1403, 1432
TseFI GTSAC 4 cut(s) 142, 243, 929, 1430
TseI GCWGC 7 cut(s) 53, 58, 345, 812, 815, 1313, 1316
Tsp45I GTSAC 4 cut(s) 142, 243, 929, 1430
TspDTI ATGAA 7 cut(s) 120, 395, 409, 575, 675, 1001, 1502
TspRI CASTG 8 cut(s) 48, 181, 508, 649, 902, 931, 1403, 1432
VpaK11BI GGWCC 3 cut(s) 943, 1236, 1444
XapI RAATTY 1 cut(s) 383
XceI RCATGY 1 cut(s) 510
XcmI CCANNNNNNNNNTGG 1 cut(s) 40
XhoI CTCGAG 2 cut(s) 64, 161
XmiI GTMKAC 1 cut(s) 1697
XmnI GAANNNNTTC 1 cut(s) 761
XspI CTAG 4 cut(s) 135, 224, 305, 1278
ZrmI AGTACT 1 cut(s) 1282
Zsp2I ATGCAT 1 cut(s) 459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.